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Conserved domains on  [gi|1063684934|ref|NP_001320832|]
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IQ-domain 32 [Arabidopsis thaliana]

Protein Classification

IQ and DUF4005 domain-containing protein( domain architecture ID 10635720)

IQ and DUF4005 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4005 super family cl16148
Protein of unknown function (DUF4005); This is a C-terminal region of plant IQ-containing ...
 520-607 1.92e-10

Protein of unknown function (DUF4005); This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins.


The actual alignment was detected with superfamily member pfam13178:

Pssm-ID: 404128  Cd Length: 97  Bit Score: 58.02  E-value: 1.92e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684934 520 RRTSFGYDQEARE-SSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERD-VVSAKKRHSLP-GVTNGKQVSPRIQRS 596
Cdd:pfam13178   6 RDDRYSSSGTSNTpFTPSRSSLPNYMAATESAKAKLRSQSAPRQRPSTPERDrSGSAAKRLSLPaPSPNGKGSSYGPRAR 85

                          90
                  ....*....|.
gi 1063684934 597 ASQAQQGTKDR 607
Cdd:pfam13178  86 QVQASYKHSLR 96
IQ smart00015
Calmodulin-binding motif; Short calmodulin-binding motif containing conserved Ile and Gln ...
 32-51 2.02e-03

Calmodulin-binding motif; Short calmodulin-binding motif containing conserved Ile and Gln residues.


:

Pssm-ID: 197470 [Multi-domain]  Cd Length: 23  Bit Score: 35.76  E-value: 2.02e-03
                           10        20
                   ....*....|....*....|
gi 1063684934   32 ESVIVVIQAAVRGFLARREL 51
Cdd:smart00015   3 TRAAIIIQAAWRGYLARKRY 22
 
Name Accession Description Interval E-value
DUF4005 pfam13178
Protein of unknown function (DUF4005); This is a C-terminal region of plant IQ-containing ...
 520-607 1.92e-10

Protein of unknown function (DUF4005); This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins.


Pssm-ID: 404128  Cd Length: 97  Bit Score: 58.02  E-value: 1.92e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684934 520 RRTSFGYDQEARE-SSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERD-VVSAKKRHSLP-GVTNGKQVSPRIQRS 596
Cdd:pfam13178   6 RDDRYSSSGTSNTpFTPSRSSLPNYMAATESAKAKLRSQSAPRQRPSTPERDrSGSAAKRLSLPaPSPNGKGSSYGPRAR 85

                          90
                  ....*....|.
gi 1063684934 597 ASQAQQGTKDR 607
Cdd:pfam13178  86 QVQASYKHSLR 96
IQ smart00015
Calmodulin-binding motif; Short calmodulin-binding motif containing conserved Ile and Gln ...
 32-51 2.02e-03

Calmodulin-binding motif; Short calmodulin-binding motif containing conserved Ile and Gln residues.


Pssm-ID: 197470 [Multi-domain]  Cd Length: 23  Bit Score: 35.76  E-value: 2.02e-03
                           10        20
                   ....*....|....*....|
gi 1063684934   32 ESVIVVIQAAVRGFLARREL 51
Cdd:smart00015   3 TRAAIIIQAAWRGYLARKRY 22
 
Name Accession Description Interval E-value
DUF4005 pfam13178
Protein of unknown function (DUF4005); This is a C-terminal region of plant IQ-containing ...
 520-607 1.92e-10

Protein of unknown function (DUF4005); This is a C-terminal region of plant IQ-containing putative calmodulin-binding proteins.


Pssm-ID: 404128  Cd Length: 97  Bit Score: 58.02  E-value: 1.92e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063684934 520 RRTSFGYDQEARE-SSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERD-VVSAKKRHSLP-GVTNGKQVSPRIQRS 596
Cdd:pfam13178   6 RDDRYSSSGTSNTpFTPSRSSLPNYMAATESAKAKLRSQSAPRQRPSTPERDrSGSAAKRLSLPaPSPNGKGSSYGPRAR 85

                          90
                  ....*....|.
gi 1063684934 597 ASQAQQGTKDR 607
Cdd:pfam13178  86 QVQASYKHSLR 96
IQ smart00015
Calmodulin-binding motif; Short calmodulin-binding motif containing conserved Ile and Gln ...
 32-51 2.02e-03

Calmodulin-binding motif; Short calmodulin-binding motif containing conserved Ile and Gln residues.


Pssm-ID: 197470 [Multi-domain]  Cd Length: 23  Bit Score: 35.76  E-value: 2.02e-03
                           10        20
                   ....*....|....*....|
gi 1063684934   32 ESVIVVIQAAVRGFLARREL 51
Cdd:smart00015   3 TRAAIIIQAAWRGYLARKRY 22
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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