NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1063695095|ref|NP_001320321|]
View 

BEL1-like homeodomain 3 [Arabidopsis thaliana]

Protein Classification

BEL1-like homeodomain protein( domain architecture ID 11167014)

BEL1-like homeodomain protein is a plant-specific transcription factor involved in the transcriptional regulation of key developmental processes similar to Arabidopsis thaliana BEL1 which is involved in ovule development; is a DNA-binding protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 168-296 4.41e-59

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


:

Pssm-ID: 429514  Cd Length: 139  Bit Score: 188.63  E-value: 4.41e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095 168 VLRSRYLKPTQQLLDEVVSV-RKDLKLGNKKMKNDKGQDFHNGSSDNI-TEDDKSQSQ------ELSPSERQELQSKKSK 239
Cdd:pfam07526   2 LLRSRYLKPAQELLDEVVSVgGKSIASKSSSSSVSKKEDSEDGGSSQSgGGEGGGGSSsgggspSLSSAERQELQRKKAK 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063695095 240 LLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAI 296
Cdd:pfam07526  82 LLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAI 138
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 365-393 2.67e-08

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


:

Pssm-ID: 428673  Cd Length: 39  Bit Score: 49.44  E-value: 2.67e-08
                          10        20
                  ....*....|....*....|....*....
gi 1063695095 365 LFEHFLHPYPKESEKIMLSKQTGLSKNQV 393
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQI 29
 
Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 168-296 4.41e-59

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


Pssm-ID: 429514  Cd Length: 139  Bit Score: 188.63  E-value: 4.41e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095 168 VLRSRYLKPTQQLLDEVVSV-RKDLKLGNKKMKNDKGQDFHNGSSDNI-TEDDKSQSQ------ELSPSERQELQSKKSK 239
Cdd:pfam07526   2 LLRSRYLKPAQELLDEVVSVgGKSIASKSSSSSVSKKEDSEDGGSSQSgGGEGGGGSSsgggspSLSSAERQELQRKKAK 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063695095 240 LLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAI 296
Cdd:pfam07526  82 LLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAI 138
POX smart00574
domain associated with HOX domains;
162-296 3.12e-50

domain associated with HOX domains;


Pssm-ID: 214728  Cd Length: 140  Bit Score: 166.01  E-value: 3.12e-50
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095  162 SGFVSSVLRSRYLKPTQQLLDEVVSVRKDLKLGNKKMKNDKGQDFHngSSDNITED-----DKSQSQELSPSERQELQSK 236
Cdd:smart00574   1 TGGVFILRNSKYLKAAQELLDEFCNVGRGSSKKKKQSGNDSPVSTS--SNEGGGENlsggsSSSEVPPLSTAERQELQRK 78

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095  237 KSKLLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAI 296
Cdd:smart00574  79 KAKLLSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISRHFRCLKDAI 138
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 365-393 2.67e-08

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


Pssm-ID: 428673  Cd Length: 39  Bit Score: 49.44  E-value: 2.67e-08
                          10        20
                  ....*....|....*....|....*....
gi 1063695095 365 LFEHFLHPYPKESEKIMLSKQTGLSKNQV 393
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQI 29
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 347-393 2.52e-04

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 38.76  E-value: 2.52e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1063695095 347 WRPQRGLPENSVSILRAWlFEHflHPYPKESEKIMLSKQTGLSKNQV 393
Cdd:cd00086     1 RRKRTRFTPEQLEELEKE-FEK--NPYPSREEREELAKELGLTERQV 44
 
Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 168-296 4.41e-59

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


Pssm-ID: 429514  Cd Length: 139  Bit Score: 188.63  E-value: 4.41e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095 168 VLRSRYLKPTQQLLDEVVSV-RKDLKLGNKKMKNDKGQDFHNGSSDNI-TEDDKSQSQ------ELSPSERQELQSKKSK 239
Cdd:pfam07526   2 LLRSRYLKPAQELLDEVVSVgGKSIASKSSSSSVSKKEDSEDGGSSQSgGGEGGGGSSsgggspSLSSAERQELQRKKAK 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063695095 240 LLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAI 296
Cdd:pfam07526  82 LLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAI 138
POX smart00574
domain associated with HOX domains;
162-296 3.12e-50

domain associated with HOX domains;


Pssm-ID: 214728  Cd Length: 140  Bit Score: 166.01  E-value: 3.12e-50
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095  162 SGFVSSVLRSRYLKPTQQLLDEVVSVRKDLKLGNKKMKNDKGQDFHngSSDNITED-----DKSQSQELSPSERQELQSK 236
Cdd:smart00574   1 TGGVFILRNSKYLKAAQELLDEFCNVGRGSSKKKKQSGNDSPVSTS--SNEGGGENlsggsSSSEVPPLSTAERQELQRK 78

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695095  237 KSKLLTMVDEVDKRYNQYHHQMEALASSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAI 296
Cdd:smart00574  79 KAKLLSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISRHFRCLKDAI 138
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 365-393 2.67e-08

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


Pssm-ID: 428673  Cd Length: 39  Bit Score: 49.44  E-value: 2.67e-08
                          10        20
                  ....*....|....*....|....*....
gi 1063695095 365 LFEHFLHPYPKESEKIMLSKQTGLSKNQV 393
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQI 29
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 347-393 2.52e-04

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 38.76  E-value: 2.52e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1063695095 347 WRPQRGLPENSVSILRAWlFEHflHPYPKESEKIMLSKQTGLSKNQV 393
Cdd:cd00086     1 RRKRTRFTPEQLEELEKE-FEK--NPYPSREEREELAKELGLTERQV 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH