|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1-968 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 841.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 1 MAFSSPSDFKRYHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKDQEIERGHTIGPELIQAIRESRVSIVVLSEKYASSC 80
Cdd:PLN03210 2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 81 WCLDELVEILKCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKTWIVKQRWIKALEYIATVAGEHSLSWANEA 160
Cdd:PLN03210 82 WCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 161 ELIQKIATDVSNKLNLTPSRDFEGMVGLEAHLTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFM 240
Cdd:PLN03210 162 KMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 241 ------------GTIDVNDYDSKLCLQNKLLSKILNQKDMKIHHLGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWF 308
Cdd:PLN03210 242 drafisksmeiySSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 309 GHGSRIIVSLNDRKILKAHGINDIYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVELCGKLPLGLRVVGSSFYG 388
Cdd:PLN03210 322 GSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRG 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 389 ESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERH-QSLFLHIACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLV 467
Cdd:PLN03210 402 RDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLI 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 468 STN-GWITMHCLLQQLGRQVV-VQQGDPGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIETLSISKRAFNRMRNLK 545
Cdd:PLN03210 482 HVReDIVEMHSLLQEMGKEIVrAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLL 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 546 FLNFYNGSVS--------LLEDMEYLP-RLRLLYWGSYPRKSLPLTFKPECLVELYMGFSKLEKLWGGIQPLTNLKKINL 616
Cdd:PLN03210 562 FLKFYTKKWDqkkevrwhLPEGFDYLPpKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDL 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 617 GYSSNLKEIPNLSKATNLKTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLRSFP 696
Cdd:PLN03210 642 RGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFP 721
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 697 DISSNIKRLYVAGTMIKEFPASI------VGHWCRLDFLQIGSRSLKR---LTHVPESVTHLDLrnSDIKM---IPDCVI 764
Cdd:PLN03210 722 DISTNISWLDLDETAIEEFPSNLrlenldELILCEMKSEKLWERVQPLtplMTMLSPSLTRLFL--SDIPSlveLPSSIQ 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 765 GLPHLVSLLVENCTKLVSIQG--HSPSLVTLFADHCISLKS--------------------------------------- 803
Cdd:PLN03210 800 NLHKLEHLEIENCINLETLPTgiNLESLESLDLSGCSRLRTfpdistnisdlnlsrtgieevpwwiekfsnlsfldmngc 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 804 ---VCCSFHgpISKLM-------------------------------------------FYNCLKLDKESKrgIIQQSGN 837
Cdd:PLN03210 880 nnlQRVSLN--ISKLKhletvdfsdcgalteaswngspsevamatdnihsklpstvcinFINCFNLDQEAL--LQQQSIF 955
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 838 KSICLPGKEIPAEFTHQTIG-NLITISL--APGCEeaysTFSRFKACLLLS----PIKNFAFN-KINC-FLRSKGVEISR 908
Cdd:PLN03210 956 KQLILSGEEVPSYFTHRTTGaSLTNIPLlhISPCQ----PFFRFRACAVVDsesfFIISVSFDiQVCCrFIDRLGNHFDS 1031
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063735383 909 TTESIYpfVSGGSLSEHLFIF-CGDLFPEENRSLMDVTPN--EILFDFSSSDVEIV--ECGVKIF 968
Cdd:PLN03210 1032 PYQPHV--FSVTKKGSHLVIFdCCFPLNEDNAPLAELNYDhvDIQFRLTNKNSQLKlkGCGIRLS 1094
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
12-177 |
3.05e-61 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 206.06 E-value: 3.05e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 12 YHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKD-QEIERGHTIGPELIQAIRESRVSIVVLSEKYASSCWCLDELVEIL 90
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 91 KCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKTWIVKQRWIKALEYIATVagEHSLSWANEAELIQKIATDV 170
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*..
gi 1063735383 171 SNKLNLT 177
Cdd:pfam01582 159 SNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
11-147 |
6.12e-36 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 132.83 E-value: 6.12e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 11 RYHVFSSFHG-PDVRSGFLSHLHNHFESKGITPFKDQEIERGHtIGPELIQAIRESRVSIVVLSEKYASSCWCLDELVEI 89
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 90 LKCKEASGQ-VVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKTWIVK-QRWIKALEYIAT 147
Cdd:smart00255 80 LENALEEGGlRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKeQFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
604-776 |
3.33e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 85.37 E-value: 3.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 604 GIQPLTNLKKINLGySSNLKEIP-NLSKATNLKTLTLTGCEsLVEIPSSIWNLQKLEMLYASGCiKLQVIPTNI-NLASL 681
Cdd:COG4886 108 ELSNLTNLESLDLS-GNQLTDLPeELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNN-QLTDLPEELgNLTNL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 682 EEVNMSNCsRLRSFPD-IS--SNIKRLYVAGTMIKEFPASIvGHWCRLDFLQIGSrslKRLTHVPE-----SVTHLDLRN 753
Cdd:COG4886 185 KELDLSNN-QITDLPEpLGnlTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSN---NQLTDLPElgnltNLEELDLSN 259
|
170 180
....*....|....*....|...
gi 1063735383 754 SDIKMIPDCvIGLPHLVSLLVEN 776
Cdd:COG4886 260 NQLTDLPPL-ANLTNLKTLDLSN 281
|
|
| TIGR02928 |
TIGR02928 |
orc1/cdc6 family replication initiation protein; Members of this protein family are found ... |
211-295 |
3.68e-03 |
|
orc1/cdc6 family replication initiation protein; Members of this protein family are found exclusively in the archaea. This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. Several members may be found in genome and interact with each other. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 274354 [Multi-domain] Cd Length: 365 Bit Score: 41.08 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 211 IWGPAGIGKTTIARALFNQLST-GFRLSCFMGTIDVN--DYDSklclQNKLLSKILNQ---KDMKIHHLG---------- 274
Cdd:TIGR02928 45 IYGKTGTGKTAVTKYVMKELEEaAEDRDVRVVTVYVNcqILDT----LYQVLVELANQlrgSGEEVPTTGlstsevfrrl 120
|
90 100
....*....|....*....|...
gi 1063735383 275 --AIEEwlHNQRVLIVLDDVDDL 295
Cdd:TIGR02928 121 ykELNE--RGDSLIIVLDEIDYL 141
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1-968 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 841.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 1 MAFSSPSDFKRYHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKDQEIERGHTIGPELIQAIRESRVSIVVLSEKYASSC 80
Cdd:PLN03210 2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 81 WCLDELVEILKCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKTWIVKQRWIKALEYIATVAGEHSLSWANEA 160
Cdd:PLN03210 82 WCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 161 ELIQKIATDVSNKLNLTPSRDFEGMVGLEAHLTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFM 240
Cdd:PLN03210 162 KMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 241 ------------GTIDVNDYDSKLCLQNKLLSKILNQKDMKIHHLGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWF 308
Cdd:PLN03210 242 drafisksmeiySSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 309 GHGSRIIVSLNDRKILKAHGINDIYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAKRVVELCGKLPLGLRVVGSSFYG 388
Cdd:PLN03210 322 GSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRG 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 389 ESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERH-QSLFLHIACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLV 467
Cdd:PLN03210 402 RDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLI 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 468 STN-GWITMHCLLQQLGRQVV-VQQGDPGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIETLSISKRAFNRMRNLK 545
Cdd:PLN03210 482 HVReDIVEMHSLLQEMGKEIVrAQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLL 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 546 FLNFYNGSVS--------LLEDMEYLP-RLRLLYWGSYPRKSLPLTFKPECLVELYMGFSKLEKLWGGIQPLTNLKKINL 616
Cdd:PLN03210 562 FLKFYTKKWDqkkevrwhLPEGFDYLPpKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDL 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 617 GYSSNLKEIPNLSKATNLKTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLEEVNMSNCSRLRSFP 696
Cdd:PLN03210 642 RGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFP 721
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 697 DISSNIKRLYVAGTMIKEFPASI------VGHWCRLDFLQIGSRSLKR---LTHVPESVTHLDLrnSDIKM---IPDCVI 764
Cdd:PLN03210 722 DISTNISWLDLDETAIEEFPSNLrlenldELILCEMKSEKLWERVQPLtplMTMLSPSLTRLFL--SDIPSlveLPSSIQ 799
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 765 GLPHLVSLLVENCTKLVSIQG--HSPSLVTLFADHCISLKS--------------------------------------- 803
Cdd:PLN03210 800 NLHKLEHLEIENCINLETLPTgiNLESLESLDLSGCSRLRTfpdistnisdlnlsrtgieevpwwiekfsnlsfldmngc 879
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 804 ---VCCSFHgpISKLM-------------------------------------------FYNCLKLDKESKrgIIQQSGN 837
Cdd:PLN03210 880 nnlQRVSLN--ISKLKhletvdfsdcgalteaswngspsevamatdnihsklpstvcinFINCFNLDQEAL--LQQQSIF 955
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 838 KSICLPGKEIPAEFTHQTIG-NLITISL--APGCEeaysTFSRFKACLLLS----PIKNFAFN-KINC-FLRSKGVEISR 908
Cdd:PLN03210 956 KQLILSGEEVPSYFTHRTTGaSLTNIPLlhISPCQ----PFFRFRACAVVDsesfFIISVSFDiQVCCrFIDRLGNHFDS 1031
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063735383 909 TTESIYpfVSGGSLSEHLFIF-CGDLFPEENRSLMDVTPN--EILFDFSSSDVEIV--ECGVKIF 968
Cdd:PLN03210 1032 PYQPHV--FSVTKKGSHLVIFdCCFPLNEDNAPLAELNYDhvDIQFRLTNKNSQLKlkGCGIRLS 1094
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
12-177 |
3.05e-61 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 206.06 E-value: 3.05e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 12 YHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKD-QEIERGHTIGPELIQAIRESRVSIVVLSEKYASSCWCLDELVEIL 90
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 91 KCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKTWIVKQRWIKALEYIATVagEHSLSWANEAELIQKIATDV 170
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*..
gi 1063735383 171 SNKLNLT 177
Cdd:pfam01582 159 SNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
11-147 |
6.12e-36 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 132.83 E-value: 6.12e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 11 RYHVFSSFHG-PDVRSGFLSHLHNHFESKGITPFKDQEIERGHtIGPELIQAIRESRVSIVVLSEKYASSCWCLDELVEI 89
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGG-DLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 90 LKCKEASGQ-VVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGKTWIVK-QRWIKALEYIAT 147
Cdd:smart00255 80 LENALEEGGlRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKeQFWKKALYAVPS 139
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
188-395 |
1.11e-20 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 92.44 E-value: 1.11e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 188 LEAHLTKLDSFLcLESDDVKMIGIWGPAGIGKTTIARALFNQLSTgfRLSCFMGTIDVndYDSKLCLQNKLLSKILNQ-- 265
Cdd:pfam00931 1 REDMVEKVIGKL-SEKDEPGIVGIHGMGGVGKTTLAAQIFNDFDE--VEGHFDSVAWV--VVSKTFTISTLQQTILQNlg 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 266 ---KDMKIHHLGAIEEWLHN----QRVLIVLDDVDDLEQLEVLAKESSWFGHGSRIIVSLNDRKILKAHG-INDIYDVDF 337
Cdd:pfam00931 76 lseDDWDNKEEGELARKIRRalltKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGgPSDPHEVEL 155
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 338 PSEEEALEILCLSAFKQNSPQD-GFEEVAKRVVELCGKLPLGLRVVGSSFYGES-EDEWR 395
Cdd:pfam00931 156 LEPDEAWELFENKVFPKTLGECeLLEDVAKEIVEKCRGLPLALKVLGGLLSCKKtVEEWK 215
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
604-776 |
3.33e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 85.37 E-value: 3.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 604 GIQPLTNLKKINLGySSNLKEIP-NLSKATNLKTLTLTGCEsLVEIPSSIWNLQKLEMLYASGCiKLQVIPTNI-NLASL 681
Cdd:COG4886 108 ELSNLTNLESLDLS-GNQLTDLPeELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNN-QLTDLPEELgNLTNL 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 682 EEVNMSNCsRLRSFPD-IS--SNIKRLYVAGTMIKEFPASIvGHWCRLDFLQIGSrslKRLTHVPE-----SVTHLDLRN 753
Cdd:COG4886 185 KELDLSNN-QITDLPEpLGnlTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSN---NQLTDLPElgnltNLEELDLSN 259
|
170 180
....*....|....*....|...
gi 1063735383 754 SDIKMIPDCvIGLPHLVSLLVEN 776
Cdd:COG4886 260 NQLTDLPPL-ANLTNLKTLDLSN 281
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
524-772 |
3.21e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 79.21 E-value: 3.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 524 DISKIETLSISKRAFNRMRNLKFLNFYNGSVSLLEDMEYLPRLRLLYWGSYPRKSLPLTFKPECLVELYMGFSKLEKLWG 603
Cdd:COG4886 5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 604 GIQPLTNLKKINLGYSSNLKEIPNLSKATNLKTLTLTGCEsLVEIPSSIWNLQKLEMLYASGCiKLQVIPTNI-NLASLE 682
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNN-QLTDLPEPLgNLTNLK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 683 EVNMSNCsRLRSFPD-IS--SNIKRLYVAGTMIKEFPASIvGHWCRLDFLQIGSRslkRLTHVPESV------THLDLRN 753
Cdd:COG4886 163 SLDLSNN-QLTDLPEeLGnlTNLKELDLSNNQITDLPEPL-GNLTNLEELDLSGN---QLTDLPEPLanltnlETLDLSN 237
|
250
....*....|....*....
gi 1063735383 754 SDIKMIPDcVIGLPHLVSL 772
Cdd:COG4886 238 NQLTDLPE-LGNLTNLEEL 255
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
14-100 |
1.20e-10 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 60.02 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 14 VFSSFHGPDvrSGFLSHLHNHFESKGITPFKDQ-EIERGHTIGPELIQAIRESRVSIVVLSEKYASSCWCLDELVEILKC 92
Cdd:pfam13676 1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRwDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78
|
....*...
gi 1063735383 93 KEASGQVV 100
Cdd:pfam13676 79 PEGRKRLI 86
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
4-113 |
3.19e-07 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 51.75 E-value: 3.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 4 SSPSDFKRYHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKD-QEIERGHTIGPELIQAIRESRVSIVVLSEKYASSCWC 82
Cdd:PLN03194 19 SSSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDnKNMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFC 98
|
90 100 110
....*....|....*....|....*....|.
gi 1063735383 83 LDELVEILKCKEAsgqvVMTIFYKVDPSDVR 113
Cdd:PLN03194 99 LHELALIMESKKR----VIPIFCDVKPSQLR 125
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
211-296 |
1.82e-06 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 51.39 E-value: 1.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 211 IWGPAGIGKTTIARALFNQL-STGFRLSCFMGTIDVNdydsklCLQNK----LLSKILNQ--KDMKIHHLG--------A 275
Cdd:COG1474 56 IYGPTGTGKTAVAKYVLEELeEEAEERGVDVRVVYVN------CRQAStryrVLSRILEElgSGEDIPSTGlstdelfdR 129
|
90 100
....*....|....*....|...
gi 1063735383 276 IEEWL--HNQRVLIVLDDVDDLE 296
Cdd:COG1474 130 LYEALdeRDGVLVVVLDEIDYLV 152
|
|
| NACHT |
COG5635 |
Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; |
140-474 |
1.79e-05 |
|
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
Pssm-ID: 444362 [Multi-domain] Cd Length: 935 Bit Score: 49.03 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 140 KALEYIATVAGEHSLSWANEAELIQKIATDVSNKLNLTPSRDFEGMVGLEAHLTKLDSFLCLESDDVKMIgIWGPAGIGK 219
Cdd:COG5635 115 KAVLLSLSGGSDLVLLLSESDLLLALLILLLDADGLLVSLDDLYVPLNLLERIESLKRLELLEAKKKRLL-ILGEPGSGK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 220 TTIARALFNQLSTGF-----RLSCFmgtIDVNDYDSKLCLQNkLLSKILNQKDMKIHHlgAIEEWLHNQRVLIVLDDVD- 293
Cdd:COG5635 194 TTLLRYLALELAERYldaedPIPIL---IELRDLAEEASLED-LLAEALEKRGGEPED--ALERLLRNGRLLLLLDGLDe 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 294 ---DLEQLEVLAKESSWFG--HGSRIIVS---------------------LNDRKILKAhgINDIYDVDFPSEEEALEIL 347
Cdd:COG5635 268 vpdEADRDEVLNQLRRFLEryPKARVIITsrpegydsselegfevlelapLSDEQIEEF--LKKWFEATERKAERLLEAL 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 348 clsafkQNSPqdgfeevakRVVELCGKlPLGLRVVGSSFYGESE-DEWRIQLY--GIETNLDRKIENVLRVGYDKLSERH 424
Cdd:COG5635 346 ------EENP---------ELRELARN-PLLLTLLALLLRERGElPDTRAELYeqFVELLLERWDEQRGLTIYRELSREE 409
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1063735383 425 QSLFL-HIA-CFFNHKSVDYVTTMLADSTLDVENGLKTLAA--KSLVSTNGWIT 474
Cdd:COG5635 410 LRELLsELAlAMQENGRTEFAREELEEILREYLGRRKDAEAllDELLLRTGLLV 463
|
|
| AAA |
smart00382 |
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ... |
207-334 |
2.23e-04 |
|
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Pssm-ID: 214640 [Multi-domain] Cd Length: 148 Bit Score: 42.75 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 207 KMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTIDVNDYDSKLCLQNKLLSKILNQKDMKIHHLgAIEEWLHNQRVL 286
Cdd:smart00382 3 EVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRL-ALALARKLKPDV 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1063735383 287 IVLDDVDDL----------EQLEVLAKESSWFGHGSRIIVSLNDRKILKAHGINDIYD 334
Cdd:smart00382 82 LILDEITSLldaeqealllLLEELRLLLLLKSEKNLTVILTTNDEKDLGPALLRRRFD 139
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
587-606 |
2.59e-04 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 38.86 E-value: 2.59e-04
|
| AAA_22 |
pfam13401 |
AAA domain; |
211-299 |
3.25e-04 |
|
AAA domain;
Pssm-ID: 379165 [Multi-domain] Cd Length: 129 Bit Score: 41.56 E-value: 3.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 211 IWGPAGIGKTTIARALFNQLSTGfRLSCFmgTIDVNDYDSklclQNKLLSKILNQKDMKIHH-------LGAIEEWLHNQ 283
Cdd:pfam13401 10 LTGESGTGKTTLLRRLLEQLPEV-RDSVV--FVDLPSGTS----PKDLLRALLRALGLPLSGrlskeelLAALQQLLLAL 82
|
90 100
....*....|....*....|
gi 1063735383 284 RV--LIVLDDVDDL--EQLE 299
Cdd:pfam13401 83 AVavVLIIDEAQHLslEALE 102
|
|
| ExeA |
COG3267 |
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, ... |
208-301 |
1.06e-03 |
|
Type II secretory pathway ATPase component GspA/ExeA/MshM [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 442498 [Multi-domain] Cd Length: 261 Bit Score: 42.08 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 208 MIGIWGPAGIGKTTIARALFNQLSTGFRL-SCFMGTIDVNDYDSKLCLQNKLLSKILNQKDMkihhLGAIEEWL-----H 281
Cdd:COG3267 45 FVVLTGEVGTGKTTLLRRLLERLPDDVKVaYIPNPQLSPAELLRAIADELGLEPKGASKADL----LRQLQEFLlelaaA 120
|
90 100
....*....|....*....|..
gi 1063735383 282 NQRVLIVLDDVDDL--EQLEVL 301
Cdd:COG3267 121 GRRVVLIIDEAQNLppETLEEL 142
|
|
| PRK13342 |
PRK13342 |
recombination factor protein RarA; Reviewed |
180-235 |
1.11e-03 |
|
recombination factor protein RarA; Reviewed
Pssm-ID: 237355 [Multi-domain] Cd Length: 413 Bit Score: 42.76 E-value: 1.11e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1063735383 180 RDFEGMVGLEaHLTKLDSFL--CLESDDV-KMIgIWGPAGIGKTTIARALFNQLSTGFR 235
Cdd:PRK13342 9 KTLDEVVGQE-HLLGPGKPLrrMIEAGRLsSMI-LWGPPGTGKTTLARIIAGATDAPFE 65
|
|
| AAA_16 |
pfam13191 |
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ... |
186-232 |
1.38e-03 |
|
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.
Pssm-ID: 433025 [Multi-domain] Cd Length: 167 Bit Score: 40.56 E-value: 1.38e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1063735383 186 VGLEAHLTKLDSFLC-LESDDVKMIGIWGPAGIGKTTIARALFNQLST 232
Cdd:pfam13191 3 VGREEELEQLLDALDrVRSGRPPSVLLTGEAGTGKTTLLRELLRALER 50
|
|
| RarA |
COG2256 |
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, ... |
180-237 |
2.57e-03 |
|
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, recombination and repair];
Pssm-ID: 441857 [Multi-domain] Cd Length: 439 Bit Score: 41.58 E-value: 2.57e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063735383 180 RDFEGMVGLEaHLTKLDSFL--CLESDDVK-MIgIWGPAGIGKTTIARALFNQLSTGF-RLS 237
Cdd:COG2256 22 RTLDEVVGQE-HLLGPGKPLrrAIEAGRLSsMI-LWGPPGTGKTTLARLIANATDAEFvALS 81
|
|
| TIGR02928 |
TIGR02928 |
orc1/cdc6 family replication initiation protein; Members of this protein family are found ... |
211-295 |
3.68e-03 |
|
orc1/cdc6 family replication initiation protein; Members of this protein family are found exclusively in the archaea. This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. Several members may be found in genome and interact with each other. [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 274354 [Multi-domain] Cd Length: 365 Bit Score: 41.08 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063735383 211 IWGPAGIGKTTIARALFNQLST-GFRLSCFMGTIDVN--DYDSklclQNKLLSKILNQ---KDMKIHHLG---------- 274
Cdd:TIGR02928 45 IYGKTGTGKTAVTKYVMKELEEaAEDRDVRVVTVYVNcqILDT----LYQVLVELANQlrgSGEEVPTTGlstsevfrrl 120
|
90 100
....*....|....*....|...
gi 1063735383 275 --AIEEwlHNQRVLIVLDDVDDL 295
Cdd:TIGR02928 121 ykELNE--RGDSLIIVLDEIDYL 141
|
|
| Udk |
COG0572 |
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway ... |
202-231 |
5.74e-03 |
|
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway/BioSystem: Pyrimidine salvage
Pssm-ID: 440337 [Multi-domain] Cd Length: 206 Bit Score: 39.44 E-value: 5.74e-03
10 20 30
....*....|....*....|....*....|
gi 1063735383 202 ESDDVKMIGIWGPAGIGKTTIARALFNQLS 231
Cdd:COG0572 3 RSGKPRIIGIAGPSGSGKTTFARRLAEQLG 32
|
|
| |
