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Conserved domains on  [gi|1063732857|ref|NP_001318602|]
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Major facilitator superfamily protein [Arabidopsis thaliana]

Protein Classification

NRT1/PTR family MFS transporter( domain architecture ID 13024510)

NRT1/PTR (nitrate transporter/peptide transporter) family major facilitator superfamily (MFS) transporter is a proton-coupled transporter that facilitates the transport of one or more from a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
63-580 0e+00

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 694.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17419     1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17419    81 IGLLLLTLSSALPSLRPPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEdpieKASKSAFFS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17419   161 YFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR---------------------------- 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17419   213 -----------------------------------------------------------EVKCILRLLPIWLSTIIYSVV 233
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMV 450
Cdd:cd17419   234 YTQMATLFVEQGAAMDTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRkvtghpkgITELQRMGIGLVIGILAMV 313
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 451 AAGLTEIQRLKRVVPG-----QKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17419   314 VAALVEIQRLKVARPSnlddpTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYL 393
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063732857 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17419   394 SSLLVTIVNKVTTKDGS-PGWIPDNLNKGHLDRFYWLLAALSGIDFVVFLICAKW 447
 
Name Accession Description Interval E-value
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
63-580 0e+00

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 694.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17419     1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17419    81 IGLLLLTLSSALPSLRPPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEdpieKASKSAFFS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17419   161 YFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR---------------------------- 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17419   213 -----------------------------------------------------------EVKCILRLLPIWLSTIIYSVV 233
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMV 450
Cdd:cd17419   234 YTQMATLFVEQGAAMDTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRkvtghpkgITELQRMGIGLVIGILAMV 313
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 451 AAGLTEIQRLKRVVPG-----QKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17419   314 VAALVEIQRLKVARPSnlddpTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYL 393
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063732857 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17419   394 SSLLVTIVNKVTTKDGS-PGWIPDNLNKGHLDRFYWLLAALSGIDFVVFLICAKW 447
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
173-547 2.27e-81

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 261.48  E-value: 2.27e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 173 SSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD-DKNSKAAFFSYFYFALNVGALFSNTILVYFEDKGLWTEGFLVS 251
Cdd:pfam00854  28 PPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEEtDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLP 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 252 LGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQV-FVATARKWSVVRpgdphelyelegpesAIKGSRKIFHSTKFLFLD 330
Cdd:pfam00854 108 AVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVlPVAAWNKVKLNG---------------SSAGIKKLHWLDWARELD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 331 RAAVITENdRNGTRSNAWrlCSVTQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAYVGKFHIPAASMSVF 410
Cdd:pfam00854 173 ALIILGIV-VPGIFFNIW--CTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQARTMNRKIGSFEIPPAQFQAF 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 411 DIFSVFVSTGIYRHIIFPYVR-----PTELMRMGIGLIIGIMAMVAAGLTEIQRLK--RVVPGQKESELTILWQIPQYVL 483
Cdd:pfam00854 250 NAILVLIFIPIFDRLVYPLGRkctggLTPLQKMAVGLFLASLAFAIAAIVQLKRNDtgPEFPIAQEVPISVLWLIPQYLL 329
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063732857 484 VGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVMAITKRGENSpGWI 547
Cdd:pfam00854 330 IGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTAKPTNVLGAY-GWL 392
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
87-589 3.60e-26

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 112.22  E-value: 3.60e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  87 LVLFLTR-----VMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswfflikprg 161
Cdd:COG3104    37 LVLYLTAsladgGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGHFLLAL----------- 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 162 cgdgdlecnppsSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVYFEDK 241
Cdd:COG3104   106 ------------PGGVTLFYLGLALIAVGNGLFKPNISSLVGQLYDPGDPRRDAGFTIFYMGINIGAFLAPLLCGYLGEK 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 242 GLWTEGFLVSLGSAIVALVAFLAptrQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHELYELEGPESAIKGSRKIF 321
Cdd:COG3104   174 YGWHYGFGAAAIGMLIGLIIFLL---GRKYLGDIGLEPDNPLSKKERLIAVALGALLLVLVLAGLLSNANIANYLLYVIA 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 322 HSTKFLFLDRAAVITENDRNGtrsnawrlcsvtqveeakcVMKLLPIWLCTIIYSVIFTQMASLFVEQGD-VMNAYVGKF 400
Cdd:COG3104   251 IIAYFIFILRSKKLTKEERKR-------------------LLAILILFLFSIVFWALYEQAGTSLNLFADrNVDRSLFGF 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 401 HIPAASM----SVFDIFSVFVSTGIYRHIIFPYVRPTELMRMGIGLIIGIMAMVAAGLTEIQrlkrVVPGQKESeltILW 476
Cdd:COG3104   312 EIPPSWFqslnPLFIIILAPVFAALWTKLGKRGKEPSTPTKFALGLLLLGLGFLVMALAALL----AGAGGKVS---PLW 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 477 QIPQYVLVGASEVFMY-VGqLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVmaitkrgenspgwipenlNEGH 555
Cdd:COG3104   385 LVLAYLLLTIGELCLSpVG-LSMITKLAPARFAGQMMGLWFLATALGNLLAGLLAGLY------------------AVPG 445
                         490       500       510
                  ....*....|....*....|....*....|....
gi 1063732857 556 MDRFYFLIAALAAIDFVVYLIFAKWYQPISHDED 589
Cdd:COG3104   446 YTAYFLLLGGIALVAGVVLLLLSPKLRRLMHGVE 479
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
80-456 5.66e-23

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 103.69  E-value: 5.66e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  80 FFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWFFLIKP 159
Cdd:TIGR00926   3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 160 rgcgdgdlecnPPSSLGVaifyLSVYLVAFGYGGHQPTLATFGADQLDDDKNS-KAAFFSYFYFALNVGALFSNTILVY- 237
Cdd:TIGR00926  83 -----------LHDLLDL----LGLALIALGTGGIKPCVSAFGGDQFEERQLSlRSRFFSFFYFAINAGSLISTIITPIl 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 238 ------FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHElyelegpe 311
Cdd:TIGR00926 148 rgdvgcFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHWPL-------- 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 312 saikgsrkifhstkfLFLDRAAvitenDRNGTRsnawrlcsvtQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGD 391
Cdd:TIGR00926 220 ---------------HWLDYAK-----DKHDIR----------MIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 392 VMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTE 456
Cdd:TIGR00926 270 RMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPaiakcGTRFTSLRKMAVGGLLAALSFFVAALVQ 339
PRK15462 PRK15462
dipeptide permease;
78-273 1.61e-06

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 51.10  E-value: 1.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  78 LAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLsfvswffli 157
Cdd:PRK15462   23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--------- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 158 kprgcgdGDLECNPpsslgvAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVY 237
Cdd:PRK15462   94 -------GASEIHP------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1063732857 238 FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVK 273
Cdd:PRK15462  161 AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR 196
 
Name Accession Description Interval E-value
MFS_NPF7 cd17419
NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The ...
63-580 0e+00

NRT1/PTR family (NPF), subfamily 7 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF7 includes the nitrate transporters AtNPF7.2 and AtNPF7.3, as well as the dipeptide transporter OsNPF7.3. AtNPF7.3 is a bidirectional transporter involved in nitrate influx and efflux. NPF7 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340977 [Multi-domain]  Cd Length: 447  Bit Score: 694.50  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17419     1 WKSAIFILVNQGLATLAYFGVGVNLVLYLTRVMHQSNASAANNVSNWTGTVYITPLIGAFLSDSYWGRYWTSTLFQAIFV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17419    81 IGLLLLTLSSALPSLRPPQCGDGDLKCPPASAAQTTFLYFSLYLIALGYGGYQPCIATLGADQFDDEdpieKASKSAFFS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17419   161 YFYQALNLGSLFSNTILVYFEDNGSWGLGFGISAGAAFIGLVLFLAGTPFYR---------------------------- 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17419   213 -----------------------------------------------------------EVKCILRLLPIWLSTIIYSVV 233
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMV 450
Cdd:cd17419   234 YTQMATLFVEQGAAMDTSFGNFKIPPASMSVFEILSVAVGTVLYRKFLVPLLRkvtghpkgITELQRMGIGLVIGILAMV 313
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 451 AAGLTEIQRLKRVVPG-----QKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17419   314 VAALVEIQRLKVARPSnlddpTSPSPLSIFWQIPQYVLVGASEVFTYVGQLEFFYDQAPDGLRSLGSALCMASVALGNYL 393
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063732857 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17419   394 SSLLVTIVNKVTTKDGS-PGWIPDNLNKGHLDRFYWLLAALSGIDFVVFLICAKW 447
MFS_NPF cd17351
Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant ...
66-580 9.49e-158

Plant NRT1/PTR family (NPF) of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340909 [Multi-domain]  Cd Length: 445  Bit Score: 459.78  E-value: 9.49e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  66 AIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGV 145
Cdd:cd17351     1 APFILGNEFAERLAFYGIAVNLVTYLTKVMHLSNAKAANTVTNFSGTSYLTPLLGAFLADAYLGRYWTIAIFSVIYLVGL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 146 GLLSFVSWFFLIKPRGCGdGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD----DKNSKAAFFSYFY 221
Cdd:cd17351    81 ILLTLSASVPSLRPPPCN-PDSPCEPASSTQLTVLYVGLYLIALGTGGIKPCVSAFGADQFDEtdpkEKKQKPSFFNWFY 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 222 FALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgdp 301
Cdd:cd17351   160 FSINLGSLLAVTLVVYIQDNVSWGWGFGIPAAAMALAVIVFVAGTPFYR------------------------------- 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 302 helyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQ 381
Cdd:cd17351   209 --------------------------------------------------------EVKCLLRLLPIWATTILLSTVYAQ 232
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 382 MASLFVEQGDVMNAYVGK-FHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMVAA 452
Cdd:cd17351   233 MQTFFVQQGLTMDRRLGGsFEIPAASLSVFSTLFVLLFIPLYDRVFVPFARrytgnprgITPLQRIGIGLVLSILAMAVA 312
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 453 GLTEIQRLKRVV------PGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17351   313 ALVEVKRLRVARahglldSPTGVVPMSVFWLLPQYFLLGLAEVFTYIGQLEFFYDEAPDGMRSLGTALFLLTIALGNFLS 392
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063732857 527 SLMVNIVMAITKRGeNSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17351   393 SALVTIVNKITGKG-GGPGWLPNNLNKGRLDYFYWLLAVLSAVNFLVFLVCAKW 445
MFS_NPF8 cd17418
NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The ...
63-581 4.88e-133

NRT1/PTR family (NPF), subfamily 8 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF8 contains the Arabidopsis dipeptide transporters AtNPF8.1 (PTR1), AtNPF8.2 (PTR5), and AtNPF8.3 (PTR2), as well as tonoplast-localized transporters AtNPF8.4 (PTR4) and AtNPF8.5 (PTR6). Oryza sativa NRT1 (now called OsNPF8.9) is a low-affinity nitrate transporter. NPF8 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340976 [Multi-domain]  Cd Length: 447  Bit Score: 396.84  E-value: 4.88e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17418     1 WKACPFILGNECCERLAYYGIATNLITYLTKELHQGNVSAANNVTNWSGTCYITPLIGAFIADAYWGRYWTIASFSAIYF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFVSWFFLIKPRGCGDGDleCNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD----DKNSKAAFFS 218
Cdd:cd17418    81 IGMVLLTLSASVPGLKPASCIGSL--CPPATSVQYAVFFLGLYLIALGTGGIKPCVSSFGADQFDDtdpkEKVRKSSFFN 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17418   159 WFYFSINIGALISSSVLVWIQENVGWGWGFGIPTVFMGIAIVSFFFGTPLYR---------------------------- 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17418   211 -----------------------------------------------------------EVKILIRLLPIWASGIVFATV 231
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAMV 450
Cdd:cd17418   232 YSQMSTMFVQQGRTMDRMGGNFEIPPASLSLFDTLSVLIWVPIYDRFIVPLVRKftghergfTQLQRMGIGLFISVLSMV 311
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 451 AAGLTEIQRLKRV-----VPGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17418   312 AAAIVEIVRLQLArthnlVESGPPVPMSIFWQIPQYFLIGAAEVFTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYL 391
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063732857 526 SSLMVNIVMAITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKWY 581
Cdd:cd17418   392 SSLIVTLVTYVTTKGGK-PGWIPDNLNNGHLDYFFWLLASLSFLNILVYLWIAKRY 446
MFS_NPF5 cd17417
NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The ...
63-581 1.59e-132

NRT1/PTR family (NPF), subfamily 5 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF5 includes Arabidopsis thaliana PTR3 (AtPTR3, now named AtNPF5.2), which is a wound-induced peptide transporter that is necessary for defense against virulent bacterial pathogens. NPF5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340975 [Multi-domain]  Cd Length: 452  Bit Score: 395.48  E-value: 1.59e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17417     1 WKACSFIIGIEVAERFAYYGIASNLVTYLTTPLHQSTARAAKNVNNWSGTATLLPLLGAFVADAYLGRYRTILISSLIYL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFvSWFflIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17417    81 LGLVLLTL-SAS--LPSLKPPECNGTCSKASTLQVAFFFFSLYLVAIGQGGHKPCVQAFGADQFDEDdpkeKKQKSSFFN 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYvkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17417   158 WWYFSICAGSLTAVTVLVYIQDNVGWALGFGIPTIVMALALFVFLLGTPLYRY--------------------------- 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtQVEEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17417   211 --------------------------------------------------------KVEEVKLVLRLIPIWFTTLVFTVV 234
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVG-KFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAM 449
Cdd:cd17417   235 FAQSPTFFTKQGVTMDRTIGpNFKIPPASLQSFITLSILISIPIYDRVFVPIARKitgnprgiTLLQRIGIGMFLSILAM 314
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 450 VAAGLTEIQRLKRV-----VPGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNY 524
Cdd:cd17417   315 VIAALVEMKRLKVAkehglISPKATVPMSIFWLLPQYILLGIADVFTMVGMQEFFYDQVPDEMRSLGTALYLSVFGVGSF 394
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063732857 525 VSSLMVNIVMAITKRGeNSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKWY 581
Cdd:cd17417   395 LSSFLISIVDKITSSS-GGQSWFNNNLNRAHLDYFYWLLAVLSAVNFVLFLFVAKSY 450
MFS_NPF6 cd17413
NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The ...
63-580 4.26e-116

NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter 1/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF6 includes the first identified member of the NRT1/PTR family: Arabidopsis thaliana NRT1.1, now called AtNPF6.3. It is a dual affinity nitrate influx transporter and a nitrate sensor. It also transports auxin and has nitrate efflux activity. NPF6 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340971 [Multi-domain]  Cd Length: 457  Bit Score: 353.68  E-value: 4.26e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17413     1 WKSAALILGIEMCERLTTLGIGVNLVTYLTGTMHLPSATSANIVTNFLGTSFLLCLLGGFIADTFLGRYLTIAIFASIQA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFVSWFFLIKPRGCGDGDLE-CNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD----DKNSKAAFF 217
Cdd:cd17413    81 LGVLVLTLSTTLPSLRPPPCNHTTSHhCEPASGIQLTVLYLALYLIALGTGGIKSSVSGFGSDQFDEndpkERKLMSYFF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 218 SYFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNplprvaqvfvatarkwsvvr 297
Cdd:cd17413   161 NRFFFCISVGSLLAVTVLVYIQDNVGRGWGYGICAAAMVLAIVVFLAGTKRYRFKKSIGS-------------------- 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 298 pgdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvTQVEEAKCVMKLLPIWLCTIIYSV 377
Cdd:cd17413   221 --------------------------------------------------------TQVEEVKMVVRMLPIWATTILFWT 244
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 378 IFTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAM 449
Cdd:cd17413   245 VYAQMTTFSVEQAETMDRNIGSFEIPPASMAVFLVATILLTTAVYDRVIVPLCRKltghpqglTTLQRIGVGLVFSCLAM 324
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 450 VAAGLTEIQRLKRVV---PGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17413   325 AVAALVELKRLRIAHahgKPVKTVPMSVFWLVPQYFLVGAGEAFIYTGQLDFFIRESPKGMKSMSTGLFLSTLSLGFFVS 404
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063732857 527 SLMVNIVMAITKRGeNSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17413   405 SFLVSIVNRVTGKS-HPHGWLADNLNKGRLDYFYWLLAVLSALNFVIFLVFAKW 457
MFS_NPF1_2 cd17416
NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; ...
69-581 4.51e-106

NRT1/PTR family (NPF), subfamily 1 and 2 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF1 includes Medicago truncatula LATD/NIP, now named MtNPF1.7, which is a high-affinity nitrate transporter and is involved in nodulation and root architecture. NPF2 members are well-established nitrate and glucosinolate transporters, including Arabidopsis nitrate influx and efflux transporters with varied tissue and developmental specificity. Examples are AtNPF2.7, which is expressed in the cortex of mature roots, and AtNPF2.9, which is expressed in root companion cells where it is involved in phloem loading. NPF1/2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340974 [Multi-domain]  Cd Length: 444  Bit Score: 327.30  E-value: 4.51e-106
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLL 148
Cdd:cd17416     4 IIGNETGEKLASYGLLANLIVYLIEEYNMKSIAAANIINIWSGTTNFLPVVGAFLSDSYFGRFPTISVGSFASLLGMVLL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 149 SFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSK----AAFFSYFYFAL 224
Cdd:cd17416    84 TLTAAIPSLRPPPCETASSLCQSPSKLQLAVLYSALALLSIGAGGIRPCSLAFGADQFDKKTESGkrglESFFNWYYFTF 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 225 NVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgdphel 304
Cdd:cd17416   164 TVAQIISLTAIVYIQDNVSWKIGFGIPAALMLLSFILFLAGSRLYV---------------------------------- 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 305 yelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqVEEAKCVMKLLPIWLCTIIYSVIFTQMAS 384
Cdd:cd17416   210 ---------------------------------------------------VEDLKSLIRVIPIWSTGIILSLAMAQQMS 238
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 385 LFVEQGDVMNAYVG-KFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR--------PTELMRMGIGLIIGIMAMVAAGLT 455
Cdd:cd17416   239 LTVLQALVMDRHLGpSFQIPAGSITVFLLITLTIFIPLYDRVLVPLLRkitgrgrgLTLLQRVGIGIVFSILSMAVAAIV 318
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 456 EIQRLKRVV-PGQKESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVM 534
Cdd:cd17416   319 ERKRRKTALtQGNGTSPMSVLWLVPQLVLMGIAEAFHFIGQIEFFYQEFPESMRSTATSLFSLGMGVASYLSSALISAVH 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*..
gi 1063732857 535 AITKRGENsPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKWY 581
Cdd:cd17416   399 RTTGRGGG-GSWLPDDINKGRLDYVYWLLAGLGALNLGYFLVCSWRY 444
MFS_NPF4 cd17414
NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The ...
66-580 2.23e-92

NRT1/PTR family (NPF), subfamily 4 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. Members of the NPF4 subfamily have been shown to transport ABA. NPF4 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340972 [Multi-domain]  Cd Length: 456  Bit Score: 292.01  E-value: 2.23e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  66 AIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGV 145
Cdd:cd17414     4 AFFVLVVEALENMAYLANANNLVTYLINNMHYSLAKSANIVTNFVGTAFLLALLGGFLSDSFLSSFKTIIIFGSIELLGL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 146 GLLSFVSWFFLIKPRGCG-DGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFSYF 220
Cdd:cd17414    84 ILLTVQAHIPSLQPPSCNsLGDLTCKEPSGSQAAILFVGLYLVALGVGCIKPNLPSHGADQFDENdpkgRRQLSSFFNWY 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 221 YFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgd 300
Cdd:cd17414   164 YFSFSLGALIAVTLVVWVEENKGWDWGFGVSAAVIAVGILVFVAGTPFYR------------------------------ 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 301 phelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcSVTQVEEAKCVMKLLPIWLCTIIYSVIFT 380
Cdd:cd17414   214 ---------------------------------------------------NKTQVEEVKIVLKMLPIFACTIILNCILA 242
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 381 QMASLFVEQGDVMNAYVGK-FHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAMVA 451
Cdd:cd17414   243 QLQTFSVQQGSTMNRTKIGsFNIPPASLQAIPVIFMLILVPLYDHLLVPFARKitghesgiTHLQRIGIGLVLSTLSMVV 322
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 452 AGLTEIQRLKRVVP-GQKESE----LTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17414   323 AALVETKRKKVAVEnGLLNSKenlpISIFWIALQFLILGISDMFTAVGLLEFFYTESPSSMRSLGTALTWCSYSFGFYLS 402
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1063732857 527 SLMVNIVMAITKRGENSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17414   403 SVLVSVVNKVTGSGGHGGWLLGENLNRDRLDLFYWLLCVLSTINFLNYLFWARR 456
MFS_NPF3 cd17415
NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The ...
63-580 1.89e-85

NRT1/PTR family (NPF), subfamily 3 of the Major Facilitator Superfamily of transporters; The plant Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) is related to the POT (proton-coupled oligopeptide transporter), Peptide transporter (PepT/PTR), or Solute Carrier 15 (SLC15) family in animals. In contrast to related animal and bacterial counterparts, the plant proteins transport a wide variety of substrates including nitrate, peptides, amino acids, dicarboxylates, glucosinolates, as well as the plant hormones indole-3-acetic acid (IAA) and abscisic acid (ABA). A recent study identified eight subfamilies within this family, named NPF1-NPF8. NPF3 is the smallest NPF subfamily and it includes Cucumis sativus nitrite transporter (CsNitr1), now named CsNPF3.2. It functions as a chloroplast nitrite uptake transporter to remove toxic nitrite from the cytosol. NPF3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340973 [Multi-domain]  Cd Length: 448  Bit Score: 273.94  E-value: 1.89e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  63 WTNAIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFV 142
Cdd:cd17415     1 WKTMPFIFGNEICERLASVGFHTNLITYLTLQLHMPLVKAANILTNFNGTASLTPLLGAFIADSFAGRFWTITIGSIIYQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 143 IGVGLLSFVSWFFLIKPRGCGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD----KNSKAAFFS 218
Cdd:cd17415    81 LGMVLLTISAILPSLRPPPCNGHEVCACQASSAQLSILYLSLLLTALGSGGIRPCVVAFGADQFDESdpkqAKQTWNFFN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 219 YFYFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLAptrqyryvkpcGNPLPRvaqvfvatarkwsvvrp 298
Cdd:cd17415   161 WYYFCMGIAILLAVTVIVYIQDNVGWGWGFGIPTIAMAISVIAFVV-----------GSPLYR----------------- 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17415   213 -----------------------------------------------------------ELKSIIRMLPIWAAGILLVTA 233
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVGK-FHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP--------TELMRMGIGLIIGIMAM 449
Cdd:cd17415   234 SSQQHTFSIQQARTMNRHLTPsFQIPPASMSVFGILSLLTTVPLYDRVLMPVARKftgnergiTFLQRMGIGLFISILAT 313
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 450 VAAGLTEIQRLK------------RVVPgqkeseLTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMA 517
Cdd:cd17415   314 VVAAFVEVKRKSvaanhglldrphATVP------ISVFWLVPQYILHGIAEAFMSIGHLEFFYDQSPESMRSTATALFWS 387
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063732857 518 SMALGNYVSSLMVNIVMAITKRGENSpgWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd17415   388 TISLGSYLSTLLVTLVHKETSRGGRW--WLPNNLNRGRLDYFYWLVAVLQAVNLVYFLICARW 448
PTR2 pfam00854
POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton ...
173-547 2.27e-81

POT family; The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.


Pssm-ID: 425909 [Multi-domain]  Cd Length: 392  Bit Score: 261.48  E-value: 2.27e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 173 SSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDD-DKNSKAAFFSYFYFALNVGALFSNTILVYFEDKGLWTEGFLVS 251
Cdd:pfam00854  28 PPVHVALFFIGLALIALGTGGIKPNVSSFGGDQFEEtDPRRRSRFFSIFYFSINAGSLISTIITPYLQQNYGYPLGFGLP 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 252 LGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQV-FVATARKWSVVRpgdphelyelegpesAIKGSRKIFHSTKFLFLD 330
Cdd:pfam00854 108 AVGMIIALLVFLLGSRMYKKKPPKGNVLTKVFKVlPVAAWNKVKLNG---------------SSAGIKKLHWLDWARELD 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 331 RAAVITENdRNGTRSNAWrlCSVTQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAYVGKFHIPAASMSVF 410
Cdd:pfam00854 173 ALIILGIV-VPGIFFNIW--CTKTKVEEVKRLLRVLPLFLPLIMFWALYDQMGTSWVLQARTMNRKIGSFEIPPAQFQAF 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 411 DIFSVFVSTGIYRHIIFPYVR-----PTELMRMGIGLIIGIMAMVAAGLTEIQRLK--RVVPGQKESELTILWQIPQYVL 483
Cdd:pfam00854 250 NAILVLIFIPIFDRLVYPLGRkctggLTPLQKMAVGLFLASLAFAIAAIVQLKRNDtgPEFPIAQEVPISVLWLIPQYLL 329
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063732857 484 VGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVMAITKRGENSpGWI 547
Cdd:pfam00854 330 IGFGELFISIGGLEFFYKLAPKSMTSLITGLFLLTNALGNFLSGVIATLTAKPTNVLGAY-GWL 392
MFS_POT cd06175
Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of ...
78-580 5.17e-63

Proton-coupled oligopeptide transporter (POT) family of the Major Facilitator Superfamily of transporters; The Proton-coupled oligopeptide transporter (POT) family is present across all major kingdoms of life and is known by a variety of names. It is referred to as the Nitrate transporter/Peptide transporter (NRT1/PTR) family (NPF) in plants, and in addition to POT, it is also known as the Peptide transporter (PepT/PTR) or Solute Carrier 15 (SLC15) family in animals. Members of this family are proton-driven symporters involved in nitrogen acquisition in the form of di- and tripeptides. Plant members transport other nitrogenous ligands including nitrate, the plant hormone auxin, and glucosinolate compounds that are important for seed defense. POT proteins exhibit substrate multispecificity, with one transporter able to recognize as many as 8,400 types of di/tripeptides and certain peptide-like drugs. The POT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340865 [Multi-domain]  Cd Length: 422  Bit Score: 213.84  E-value: 5.17e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  78 LAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWFFLI 157
Cdd:cd06175    13 FTFYGIGANLVPFLTGALGLGNAQAANVVLNFLGTSYVTPLFGGWIADTFLGRYRTILIGAAIYAVGVAILTVSTIPPGL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 158 KPRGCGDGdlECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKA-AFFSYFYFALNVGALFSNTILV 236
Cdd:cd06175    93 RPLRCNPS--HCEQASGIQLTGFYAALYLIALGTGGVKANVSPLGADQFDERGPSKTqSFFNWFYFCINVGSLLAMLGTP 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 237 YFEDKGLWTEGFLVSLGSAIVALVAFlaptrqyryvkpcgnplprvaqvfvatarkwsvvrpgdphelyelegpesaikg 316
Cdd:cd06175   171 YIQDNVGWAAAYGIPFVAILLALVVF------------------------------------------------------ 196
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 317 srkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAY 396
Cdd:cd06175   197 -----------------------------------------EVKQLLRALPLFAFCILFWTVYAQMTTSYVLQALTLVRS 235
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 397 VGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTEIQRLKRV---VPGQK 468
Cdd:cd06175   236 TGLFTIPPASMQAFNPILLLLLIPVLDKVVYPlirryGVGLSPLTKIGLGFFFGSLSMFVAGFLELKRLNTAhahGPVVT 315
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 469 ESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVMAITKRgenspGWIP 548
Cdd:cd06175   316 TSPLSFWWQIPQYLLLGIGEILVSITGLEFAYREAPKSMKGFIMGLLLLTSGFGSFFGSVLVTLVSKPTDG-----AHIA 390
                         490       500       510
                  ....*....|....*....|....*....|..
gi 1063732857 549 ENLNEGHMDRFYFLIAALAAIDFVVYLIFAKW 580
Cdd:cd06175   391 DDLNKGVLTNFFFLLAVLAALNFLIFLLVSRK 422
MFS_SLC15A1_2_like cd17347
Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily ...
69-586 1.23e-44

Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters; Solute carrier family 15 member 1 (SLC15A1) and SLC15A2 are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1, or peptide transporter 1 (PepT1), is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. SLC15A2, or peptide transporter 2 (PepT2), is abundantly expressed in the apical membrane of kidney proximal tubules and is also referred to as the renal isoform. Both proteins transport di/tripeptides, but not tetrapeptides or free amino acids, using the energy generated by an inwardly directed transmembrane proton gradient. The SLC15A1/SLC15A2-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340905 [Multi-domain]  Cd Length: 427  Bit Score: 164.33  E-value: 1.23e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLL 148
Cdd:cd17347     7 IVGNEFCERFSYYGMRAILVLYLTDFLGFSEAEATAIYHSFVMLCYFFPLLGAIIADSYLGKYRTILYLSLVYCLGHIVL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 149 SFVSwfflIKPRGcgdgdlecnPPSSLGVAIfylSVYLVAFGYGGHQPTLATFGADQLD-DDKNSKAAFFSYFYFALNVG 227
Cdd:cd17347    87 AVTA----IPPLG---------PPHVWGLLI---GLLLIAIGTGGIKPCVSAFGGDQFGaDQQHLLARFFSWFYFAINAG 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 228 ALFSNTILVYFEDkglwtegfLVSLGSAIVALVAFLAPTrqyryvkpcgnplprvAQVFVATArkwsvvrpgdphelyel 307
Cdd:cd17347   151 SLLSTFLTPILRA--------DVQFGGHDCYPLAFGVPG----------------VLMAVATL----------------- 189
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 308 egpesaikgsrkIFHSTKFLFLDRaavitendrngtrsnawrlcsvtqveeaKCVMKLLPIWLCTIIYSVIFTQMASLFV 387
Cdd:cd17347   190 ------------VFWLGRKHYKDV----------------------------KALLRVLVLFIPLPVFWALFDQQGSRWT 229
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 388 EQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTEIqRLKR 462
Cdd:cd17347   230 LQAEQMDGLVGGFTILPDQMQALNPILILILIPLFDYVIYPllercGIPLTPLRKMGVGMILAALAFVIAGFLQL-RIDG 308
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 463 VVPGQ------------KESELTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYvsslmv 530
Cdd:cd17347   309 GLPGQpdpgevttfediEPNSVSILWQLPQYVVLTAGEVLFSITGLEFAYTQAPKSMKSVVQAAWLLTVALGNL------ 382
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063732857 531 nIVMAITKRGENSPGWipenlneghmdRFYFLIAALAAIDFVVYLIFAKWYQPISH 586
Cdd:cd17347   383 -IVVIVAELIQFSSQA-----------AEYFFFAGLMLVVAVVFALLARFYKYVTY 426
MFS_SLC15A3_4 cd17348
Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; ...
66-578 2.96e-33

Solute Carrier family 15 members 3 and 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 members 3 (SLC15A3) and 4 (SLC15A4) are members of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. They are peptide/histidine transporters (PHTs) that transport free histidine in addition to di/tripeptides. SLC15A4, also called peptide transporter 4 or peptide/histidine transporter 1 (PHT1), is expressed in the human brain, retina, placenta, and immune cells. It is required for Toll-like receptor 7 (TLR7)- and TLR9-mediated type I interferon production in plasmacytoid dendritic cells (pDCs) and is involved in the pathogenesis of lupus-like autoimmunity. SLC15A3, also called osteoclast transporter, peptide transporter 3, or peptide/histidine transporter 2 (PHT2), is expressed in immune tissues including the spleen and thymus. The SLC15A3/SLC15A4 group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340906 [Multi-domain]  Cd Length: 435  Bit Score: 132.22  E-value: 2.96e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  66 AIILLVnQGLATLAFFGVGVNLVLFLT-RVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIG 144
Cdd:cd17348     5 AAVLLV-ELLERAAFYGITSNLVLFLNgSPFNWEGTQASQALLLFMGATYLLSPFGGWLADAYLGRFWTILLSLLLYLLG 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 145 VGLLSFVSWfflikprgcgdgdlecnppsslgvAIFYLSVYLVAFGYGGHQPTLATFGADQLDD-DKNSKAAFFSYFYFA 223
Cdd:cd17348    84 MLLFPATAA------------------------PALYAGLLLVGLGVGSVKANITPFGADQVKDrGPEATRRFFNWFYWS 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 224 LNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAFLaptrqyryvkpCGNPlprvaqVFVatarkwsvvrpgdphe 303
Cdd:cd17348   140 INLGAILSLGGVAYIQQNVSFLIGYSIPAVCVGLAFLVFL-----------CGQP------VFI---------------- 186
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 304 lyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQMA 383
Cdd:cd17348   187 ------------------------------------------------------DVKALVKILPVFLALIPYWTVYFQMQ 212
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 384 SLFVEQG-----------DVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVR-----PTELMRMGIGLIIGIM 447
Cdd:cd17348   213 TTYVLQSlhlkipnifisNIAGITNSSHTFPAAWLTMFDAVLILILIPLKDKLVDPFLKrrgllPSSLKRIAVGMFFVMC 292
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 448 AMVAAGLTEIQRLKRVVPGQKESE-----------LTILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCM 516
Cdd:cd17348   293 SAIAAGILESKRLEIVKHNTTIQQqignvtyyaadLPIWWQIPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFF 372
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063732857 517 ASMALGNYVSSLMVNIVmAITKRGENSPGWIPENLNEGHMDRFYFLIAALAAIDFVVYLIFA 578
Cdd:cd17348   373 FFSGVGSFVGSGLLALV-SIKEIGWMSSHKDFGNINGCRLNYYFFLLAGIQGVTLLLFLIIS 433
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
87-589 3.60e-26

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 112.22  E-value: 3.60e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  87 LVLFLTR-----VMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswfflikprg 161
Cdd:COG3104    37 LVLYLTAsladgGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLLGQRRAILLGGILMALGHFLLAL----------- 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 162 cgdgdlecnppsSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVYFEDK 241
Cdd:COG3104   106 ------------PGGVTLFYLGLALIAVGNGLFKPNISSLVGQLYDPGDPRRDAGFTIFYMGINIGAFLAPLLCGYLGEK 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 242 GLWTEGFLVSLGSAIVALVAFLAptrQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHELYELEGPESAIKGSRKIF 321
Cdd:COG3104   174 YGWHYGFGAAAIGMLIGLIIFLL---GRKYLGDIGLEPDNPLSKKERLIAVALGALLLVLVLAGLLSNANIANYLLYVIA 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 322 HSTKFLFLDRAAVITENDRNGtrsnawrlcsvtqveeakcVMKLLPIWLCTIIYSVIFTQMASLFVEQGD-VMNAYVGKF 400
Cdd:COG3104   251 IIAYFIFILRSKKLTKEERKR-------------------LLAILILFLFSIVFWALYEQAGTSLNLFADrNVDRSLFGF 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 401 HIPAASM----SVFDIFSVFVSTGIYRHIIFPYVRPTELMRMGIGLIIGIMAMVAAGLTEIQrlkrVVPGQKESeltILW 476
Cdd:COG3104   312 EIPPSWFqslnPLFIIILAPVFAALWTKLGKRGKEPSTPTKFALGLLLLGLGFLVMALAALL----AGAGGKVS---PLW 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 477 QIPQYVLVGASEVFMY-VGqLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSLMVNIVmaitkrgenspgwipenlNEGH 555
Cdd:COG3104   385 LVLAYLLLTIGELCLSpVG-LSMITKLAPARFAGQMMGLWFLATALGNLLAGLLAGLY------------------AVPG 445
                         490       500       510
                  ....*....|....*....|....*....|....
gi 1063732857 556 MDRFYFLIAALAAIDFVVYLIFAKWYQPISHDED 589
Cdd:COG3104   446 YTAYFLLLGGIALVAGVVLLLLSPKLRRLMHGVE 479
MFS_SLC15A1 cd17412
Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute ...
69-588 9.67e-24

Solute Carrier family 15 member 1 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 1 (SLC15A1), also called peptide transporter 1 (PepT1), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A1, as well as SLC15A2, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A1 is primarily expressed in the brush border membranes of enterocytes of the small intestine and is also known as the intestinal isoform. It is a high-capacity/low-affinity transporter that drives the transport of di-and tripeptides for metabolic purposes. It's expression is upregulated in the colon during chronic inflammation associated with inflammatory bowel disease. SLC15A1/PepT1 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340970 [Multi-domain]  Cd Length: 415  Bit Score: 104.15  E-value: 9.67e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLL 148
Cdd:cd17412     7 IVVNEFCERFSYYGMRAVLVLYFKYFLRWDDDLSTAIYHTFVALCYLTPILGAIIADSWLGKFKTIVYLSIVYTIGQAVM 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 149 SFVSWFFLIkprgcgDGDLECNPPS-SLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDK-NSKAAFFSYFYFALNV 226
Cdd:cd17412    87 AVSAIHDLT------DANRDGTPDNlTLHVALSMIGLLLIALGTGGIKPCVAAFGGDQFEEHQeKQRSRFFSIFYLSINA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 227 GALFSNTI--LVYFEDKGLWTE------GFLVSLGSAIVALVAFLAPTRQYRYVkpcgnplprvaqvfvatarkwsvvrp 298
Cdd:cd17412   161 GSLLSTIItpILRSQECGIHSKqkcyplAFGVPAALMVVALIVFILGSKMYKQI-------------------------- 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 299 gdphelyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveeaKCVMKLLPIWLCTIIYSVI 378
Cdd:cd17412   215 -------------------------------------------------------------KMVLKVLFLYIPLPMFWAL 233
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 379 FTQMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP-----TELMRMGIGLIIGIMAMVAAG 453
Cdd:cd17412   234 FDQQGSRWTLQATTMDGNFGAIQIQPDQMQTVNPILIIIMVPIFDAVIYPLIKKckinfTPLRKMTVGMFLAALAFVAAA 313
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 454 LTEIQrlkrvvpgqkeseltILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYvsslmvnIV 533
Cdd:cd17412   314 LLQIQ---------------MAWQIPQYFLLTCGEVVFSVTGLEFSYSQAPSNMKSVLQAGWLLTVAVGNI-------IV 371
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063732857 534 MAITKRGENSPGWIPenlneghmdrfYFLIAALAAIDFVVYLIFAKWYQPISHDE 588
Cdd:cd17412   372 LIVAEAGSISEQWAE-----------YVLFAALLVAVCIIFAIMAYFYTYVDPAE 415
2A1704 TIGR00926
Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and ...
80-456 5.66e-23

Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273343 [Multi-domain]  Cd Length: 654  Bit Score: 103.69  E-value: 5.66e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  80 FFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWFFLIKP 159
Cdd:TIGR00926   3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 160 rgcgdgdlecnPPSSLGVaifyLSVYLVAFGYGGHQPTLATFGADQLDDDKNS-KAAFFSYFYFALNVGALFSNTILVY- 237
Cdd:TIGR00926  83 -----------LHDLLDL----LGLALIALGTGGIKPCVSAFGGDQFEERQLSlRSRFFSFFYFAINAGSLISTIITPIl 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 238 ------FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNPLPRVAQVFVATARKWSVVRPGDPHElyelegpe 311
Cdd:TIGR00926 148 rgdvgcFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHWPL-------- 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 312 saikgsrkifhstkfLFLDRAAvitenDRNGTRsnawrlcsvtQVEEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGD 391
Cdd:TIGR00926 220 ---------------HWLDYAK-----DKHDIR----------MIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 392 VMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFP-----YVRPTELMRMGIGLIIGIMAMVAAGLTE 456
Cdd:TIGR00926 270 RMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPaiakcGTRFTSLRKMAVGGLLAALSFFVAALVQ 339
MFS_SLC15A2 cd17411
Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute ...
69-525 1.25e-16

Solute carrier family 15 member 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 2 (SLC15A2), also called peptide transporter 2 (PepT2), is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. SLC15A2, as well as SLC15A1, mediate the proton-coupled active transport of a broad range of dipeptides and tripeptides, including zwitterionic, anionic and cationic peptides, as well as a variety of peptide-like drugs such as cefadroxil, enalapril, and valacyclovir. SLC15A2 is a high-affinity transporter and is abundantly expressed in the apical membrane of kidney proximal tubules and choroid plexus epithelial cells. It is the major transporter involved in the reclamation of peptide-bound amino acids and peptide-like drugs in the kidney, and is also called the renal isoform. In choroid plexus and the brain, it acts as an efflux transporter and plays a role in regulating peptide/neuropeptide homeostasis. SLC15A2/PepT2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340969 [Multi-domain]  Cd Length: 403  Bit Score: 82.18  E-value: 1.25e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  69 LLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGvgll 148
Cdd:cd17411     7 IVVNEFCERFSYYGMKAVLTLYFLSFLHWDENLSTAIYHAFSGLCYFTPVLGALIADSWLGKFKTIIYLSIVYVVG---- 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 149 sfvswfFLIKPRGCgdgdLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNS-KAAFFSYFYFALNVG 227
Cdd:cd17411    83 ------HVIKSVGA----IPTVGDQQVHVVLSMIGLFLIALGTGGIKPCVAAFGGDQFEEEHAReRSKFFSIFYLSINAG 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 228 ALFSNTIL------VYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRyvkpcgnplprvaqvfvatarkwsvvrpgdp 301
Cdd:cd17411   153 SLISTFVTpilrgdVQCFGGDCYALAFGVPAALMVVALVVFIAGSGMYK------------------------------- 201
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 302 helyelegpesaikgsrkifhstkflfldraavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQ 381
Cdd:cd17411   202 --------------------------------------------------------EVKMVTRVLFLYIPLPMFWALFDQ 225
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 382 MASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHIIFPYVRP-----TELMRMGIGLIIGIMAMVAAGLTE 456
Cdd:cd17411   226 QGSRWTLQATRMNDFGGGFVLQPDQMQTLNPLLILVFIPIFDLGIYPLVSKckinfTSLRKMATGMILAALAFAVAAAVE 305
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063732857 457 IQrlkrvvpgqkeseltILWQIPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYV 525
Cdd:cd17411   306 IK---------------IAWQLPQYVLLSAGEVMFSITGLEFSYSQAPASMKSVLQAGWLLTVAFGNVI 359
MFS_PTR2 cd17350
Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide ...
114-526 8.41e-16

Peptide transporter PTR2 of the Major Facilitator Superfamily of transporters; Fungal peptide transporter or permease PTR2 is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. It is a 12-transmembrane domain (TMD) integral membrane protein that translocates di-/tripeptides. As with other POT family proteins, it displays characteristic substrate multispecificity. PTR2 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340908 [Multi-domain]  Cd Length: 438  Bit Score: 79.82  E-value: 8.41e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 114 YMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFVSWfflikprgcgdgdlecnpPSSL----GVAIFYLSVYLVAF 189
Cdd:cd17350    60 YVTPVIGAYVADQFLGRYNTIVCGAVIYFVGILILTCTSI------------------PSVIdagaGLGGFVVAIIIIGL 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 190 GYGGHQPTLATFGADQLD-----------------DDKNSKAAFFSYFYFALNVGAlFSNTILVYFE-DKGLWTeGFLVS 251
Cdd:cd17350   122 GTGGIKSNVSPLIADQLPkikpyvktlkngervivDPVVTLSRIYMIFYWAINVGS-LSLLATTYLErTKGFWY-AYLLP 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 252 LGSAIVALVaflaptrqyryvkpcgnplprvaqvFVATARKWSVVRPGdphelyelegpesaikgsrkifhstkfLFLDr 331
Cdd:cd17350   200 LCVFVIPLI-------------------------ILAFGKKFYKIRPD---------------------------LFID- 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 332 aavitendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFTQMASLFVEQGDVMNAYvgkfHIPAASMSVFD 411
Cdd:cd17350   227 --------------------------ELKRALRACKVFLFYPIYWVCYGQMTSNFISQAGQMQLH----GVPNDLFQAFD 276
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 412 IFSVFVSTGIYRHIIFPYVRPTE-----LMRMGIGLIIGIMAMVAAGLTEIQRLKRVVPGQK------ESELTILWQIPQ 480
Cdd:cd17350   277 SIALIIFIPILENIIYPLLRKYNipfkpITRITLGFMFASFSMIYAAVLQAKIYQAGPCYANptgtcsPNDIHVWIQIPA 356
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1063732857 481 YVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVS 526
Cdd:cd17350   357 YVLIAFSEIFASITGLEYAYTKAPPSMKSFITALFLLTNAFGAALS 402
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
79-269 2.01e-15

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 78.39  E-value: 2.01e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  79 AFFGVGVNLVLFLTRVMGQGN--AEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswffl 156
Cdd:cd17346    17 SYYGMRAILILYLTAQLGDGFseADAASIYGAYTALVYLTPIIGGWLADKVLGARRTVFIGGILMALGYLLLAL------ 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 157 ikprgcgdgdlecnppSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILV 236
Cdd:cd17346    91 ----------------SPFSVSMLYLGLALIIVGNGLFKPNISSLVGKLYDENDPRRDSGFSIFYMGINLGAFLAPLLCG 154
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1063732857 237 YFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQY 269
Cdd:cd17346   155 TLGDNYGYHYGFGLAAVGMLLGLLIFLLGRKKL 187
MFS_SLC15A5 cd17349
Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute ...
66-566 1.39e-11

Solute Carrier family 15 member 5 of the Major Facilitator Superfamily of transporters; Solute carrier family 15 member 5 (SLC15A5) is a member of the proton-coupled oligopeptide transporter (POT) family of integral membrane proteins that mediate the cellular uptake of di/tripeptides and peptide-like drugs. The specific function of SLC15A5 is unknown. SLC15A5 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340907 [Multi-domain]  Cd Length: 437  Bit Score: 66.70  E-value: 1.39e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  66 AIILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGV 145
Cdd:cd17349     4 VICLLLVELCERFTFFGIVCNMILFCTIKLGYRNHQAAIVNLCFVGTSTLTPVFVGWLAEECMGRNKLVYICLFLHFLGT 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 146 GLLSFVSW----FFLikprgcGDGDLECNPPSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKA-AFFSYF 220
Cdd:cd17349    84 ALLPVVAFpfedFYI------DTHHIIHTLAKREQTLLFYVALLTASLGTGGIRAIVCPLSAYGLQDYGSRKLmSFFNWF 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 221 YFALNVGALFSNTILVYFEDKGLWTEGFLVSLGSAIVALVAflaptrqyryvkpcgnplprvaqvfvatarkwsvvrpgd 300
Cdd:cd17349   158 YWLVNLNSAVVFVGISYIQQSVAKNLGFLIPFMSVLMALIT--------------------------------------- 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 301 phelyelegpesaikgsrkifhstkfLFLDRAAVItendrngtrsnawrlcsvtqveEAKCVMKLLPIWLCTIIYSVIFT 380
Cdd:cd17349   199 --------------------------LHMVRNDLI----------------------NTKNLVRLFPLFAFQILYRTCIM 230
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 381 QMASLFVEQGDVMNAYVGKFHIPAASMSVFDIFSVFVSTGIYRHI---IFPYVR--PTELMRMGIGLIIGIMAMVAAGLT 455
Cdd:cd17349   231 QIPSGYYLQTMNSNLNLGGFLLPIAAMNVISIIPLLILAPFLEYFsscLFSSKRygPFLSACIIAGHLCAALSVMVAGFS 310
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 456 EIQRLKRVVPGQKESELTILWQ-------IPQYVLVGASEVFMYVGQLEFFNGQAPDGLKNLGSSLCMASMALGNYVSSL 528
Cdd:cd17349   311 EIHRKRFPLVEQTLSGKVLLVSsmpcfqlAPQYVLLGVAEALVTPACSLITFRLVPSSIRGISMHFLTLFNGAGCFMGAL 390
                         490       500       510
                  ....*....|....*....|....*....|....*...
gi 1063732857 529 MVNIVMAITKrgensPGWIPENLNEGHMDRFYFLIAAL 566
Cdd:cd17349   391 LIQLVYLISE-----GNWFPNTLNKGNLERFFFFLASL 423
PRK15462 PRK15462
dipeptide permease;
78-273 1.61e-06

dipeptide permease;


Pssm-ID: 237971 [Multi-domain]  Cd Length: 493  Bit Score: 51.10  E-value: 1.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  78 LAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLsfvswffli 157
Cdd:PRK15462   23 FSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--------- 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 158 kprgcgdGDLECNPpsslgvAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVY 237
Cdd:PRK15462   94 -------GASEIHP------SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1063732857 238 FEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVK 273
Cdd:PRK15462  161 AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR 196
yjdL_sub1_fam TIGR00924
amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes ...
79-280 1.91e-05

amino acid/peptide transporter (Peptide:H+ symporter), bacterial; The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273342 [Multi-domain]  Cd Length: 475  Bit Score: 47.52  E-value: 1.91e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  79 AFFGVGVNLVLFL--TRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswffl 156
Cdd:TIGR00924  25 SYYGMQGILAVYLvqQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM------ 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 157 ikprgcgdgdlecnppsSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLD-DDKNSKAAFFSYFYFALNVGALFSNTIL 235
Cdd:TIGR00924  99 -----------------SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYErGDMPRRDGGFTLFYMSINIGSFISPLLA 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1063732857 236 VYFEDKGLWTEGFLVSLGSAIVALVAFLAPTRQYRYVKPCGNPLP 280
Cdd:TIGR00924 162 GVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLS 206
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
75-263 6.22e-05

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 45.63  E-value: 6.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  75 LATLAFFGVGVNLVLFLTRVMGQGNAEAANnvskWTGTVYMFSLVGAF----LSDsYWGRYLTCTIfqVIFVIGVGLLSF 150
Cdd:COG2271   191 LVYFALYGFLTWLPTYLVEVRGLSLAQAGL----LLSLPFLAGIVGSLlggwLSD-RLGRRRKLVL--AIGLLLAALALL 263
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 151 VSWFFlikprgcgdgdlecnppSSLGVAIFYLSvyLVAFGYGGHQPTLATFGADQLDddKNSKAAFFSYFYFALNVGALF 230
Cdd:COG2271   264 LLALL-----------------PSPALAIALLF--LAGFGLGGAFGLLWALAAELFP--KKARGTASGLVNTFGFLGGAL 322
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1063732857 231 SNTILVYFEDKGLWTEGFLVSLGSAIVALVAFL 263
Cdd:COG2271   323 GPLLVGYLLDATGYQAAFLLLAALALLAALLAL 355
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
67-264 2.43e-04

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 43.74  E-value: 2.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  67 IILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDsYWGRYLTCTIFQVIFVIGVG 146
Cdd:COG2211   231 LLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAK-RFGKKKAFIIGLLLAALGLL 309
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 147 LLSFVswfflikprgcgdgdlecnPPSSlgVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDD-----KNSKAAFFSYFY 221
Cdd:COG2211   310 LLFFL-------------------GPGN--LWLLLVLAALAGIGLGAILVLPWAMLADVVDYDewktgRRREGLYFGIFT 368
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063732857 222 FALNVGALFSNT----ILVYF--------EDKGLWTEGFLVSLGSAIVALVAFLA 264
Cdd:COG2211   369 FAIKLGQALAGAlaglLLALFgyvagaaqSPSALTGIRLLFFLLPAVLLLLAALL 423
tppB PRK09584
dipeptide/tripeptide permease DtpA;
80-263 1.55e-03

dipeptide/tripeptide permease DtpA;


Pssm-ID: 181969  Cd Length: 500  Bit Score: 41.28  E-value: 1.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  80 FFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDSYWGRYLTCTIFQVIFVIGVGLLSFvswfflikp 159
Cdd:PRK09584   37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW--------- 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 160 rgcgdgdlecnppSSLGVAIFYLSVYLVAFGYGGHQPTLATFGADQLDDDKNSKAAFFSYFYFALNVGALFSNTILVYFE 239
Cdd:PRK09584  108 -------------SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174
                         170       180
                  ....*....|....*....|....
gi 1063732857 240 DKGLWTEGFLVSLGSAIVALVAFL 263
Cdd:PRK09584  175 AKYGWSVAFALSVVGMLITVVNFA 198
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
67-228 1.57e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 41.11  E-value: 1.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  67 IILLVNQGLATLAFFGVGVNLVLFLTRVMGQGNAEAANNVSKWTGTVYMFSLVGAFLSDsYWGRYLTCTIFQVIFVIGVG 146
Cdd:COG2814   210 LLLLLLAFLLGFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLGGVLGALLAGRLAD-RFGRRRLLLIGLLLLALGLL 288
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 147 LLSFVSWFFLikprgcgdgdlecnppsslgvaiFYLSVYLVAFGYGGHQPTLATFGADQLDDDknSKAAFFSYFYFALNV 226
Cdd:COG2814   289 LLALAGSLWL-----------------------LLLALFLLGFGFGLLFPLLQALVAELAPPE--ARGRASGLYNSAFFL 343

                  ..
gi 1063732857 227 GA 228
Cdd:COG2814   344 GG 345
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
67-229 2.34e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 40.67  E-value: 2.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857  67 IILLVNQGLATLAFFGVGVNLVLFLTRVMGQGnaeaannvSKWTGTVYM--------FSLVGAFLSDsYWGRYLTCTIFQ 138
Cdd:cd17329     2 WVLLIGSFLNRLGFFMVWPFMAIYLHQQLGLS--------ASIVGLVLAlsavagivASLIGGRLAD-RFGRKPVMLAGL 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063732857 139 VIFVIGVGLLSFVSWFFLikprgcgdgdlecnppsslgVAIFYLsvyLVAFGYGGHQPTLATFGADQLDDDKnsKAAFFS 218
Cdd:cd17329    73 LLRALGFALLGFAHSPWL--------------------FAIALV---LTGFGGGLFEPASEAMIADVTTPEN--RTRAFS 127
                         170
                  ....*....|.
gi 1063732857 219 YFYFALNVGAL 229
Cdd:cd17329   128 LLYWAINLGVA 138
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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