NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1063699361|ref|NP_001318362|]
View 

Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

Protein Classification

Kelch repeat-containing protein( domain architecture ID 11459646)

Kelch repeat-containing protein, member of a superfamily of proteins with diverse functions

CATH:  2.120.10.80
Gene Ontology:  GO:0005515
SCOP:  3000448

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
17-309 6.12e-26

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 107.16  E-value: 6.12e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  17 PQARSGHTAVNVGkSMVVVFGGLVDKKFLSDIIVYDIENKLWFE-PECTGsesegqvgpTPRAFHVAITIDCHMFIFGGR 95
Cdd:COG3055    10 PTPRSEAAAALLD-GKVYVAGGLSGGSASNSFEVYDPATNTWSElAPLPG---------PPRHHAAAVAQDGKLYVFGGF 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  96 SGGKR----LGDFWVLDTDIWQWSELTSfgdLPTPRDFAAAAAIGSqKIVLCGGWDGKKWLSDVYVMDTMSLEWLELsvs 171
Cdd:COG3055    80 TGANPsstpLNDVYVYDPATNTWTKLAP---MPTPRGGATALLLDG-KIYVVGGWDDGGNVAWVEVYDPATGTWTQL--- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 172 GSLPPPRCGHTATMVEK-RLLVFGgrggggpimGDlwalkgliDEERETPGWTQLKlpgQAPSSRCGHTVTSGGHYLLLF 250
Cdd:COG3055   153 APLPTPRDHLAAAVLPDgKILVIG---------GR--------NGSGFSNTWTTLA---PLPTARAGHAAAVLGGKILVF 212
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063699361 251 GGhgtggwlsrYDVYYNDTIILDRVTAQWKRLPignEPPPPRAYHTMTCIGARHLLIGG 309
Cdd:COG3055   213 GG---------ESGFSDEVEAYDPATNTWTALG---ELPTPRHGHAAVLTDGKVYVIGG 259
 
Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
17-309 6.12e-26

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 107.16  E-value: 6.12e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  17 PQARSGHTAVNVGkSMVVVFGGLVDKKFLSDIIVYDIENKLWFE-PECTGsesegqvgpTPRAFHVAITIDCHMFIFGGR 95
Cdd:COG3055    10 PTPRSEAAAALLD-GKVYVAGGLSGGSASNSFEVYDPATNTWSElAPLPG---------PPRHHAAAVAQDGKLYVFGGF 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  96 SGGKR----LGDFWVLDTDIWQWSELTSfgdLPTPRDFAAAAAIGSqKIVLCGGWDGKKWLSDVYVMDTMSLEWLELsvs 171
Cdd:COG3055    80 TGANPsstpLNDVYVYDPATNTWTKLAP---MPTPRGGATALLLDG-KIYVVGGWDDGGNVAWVEVYDPATGTWTQL--- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 172 GSLPPPRCGHTATMVEK-RLLVFGgrggggpimGDlwalkgliDEERETPGWTQLKlpgQAPSSRCGHTVTSGGHYLLLF 250
Cdd:COG3055   153 APLPTPRDHLAAAVLPDgKILVIG---------GR--------NGSGFSNTWTTLA---PLPTARAGHAAAVLGGKILVF 212
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063699361 251 GGhgtggwlsrYDVYYNDTIILDRVTAQWKRLPignEPPPPRAYHTMTCIGARHLLIGG 309
Cdd:COG3055   213 GG---------ESGFSDEVEAYDPATNTWTALG---ELPTPRHGHAAVLTDGKVYVIGG 259
PLN02193 PLN02193
nitrile-specifier protein
14-321 1.11e-13

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 73.07  E-value: 1.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  14 GTPPQARSGHTAVNVGKSmVVVFGGL------VDKKflsdIIVYDIENKLWfepecTGSESEGQVgPTPRAFHV-AITID 86
Cdd:PLN02193  160 GEGPGLRCSHGIAQVGNK-IYSFGGEftpnqpIDKH----LYVFDLETRTW-----SISPATGDV-PHLSCLGVrMVSIG 228
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  87 CHMFIFGGRSGGKRLGDFWVLDTDIWQWSELTSFGDLPTPRDFAAAAAiGSQKIVLCGGWDGKKWLSDVYVMDTMSLEWL 166
Cdd:PLN02193  229 STLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKWF 307
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 167 ELSVSGSLPPPRCGHTATMVEkrllvfggrggggpimGDLWALKGL----IDE----ERETPGWTQLKLPGQAPSSRCGH 238
Cdd:PLN02193  308 HCSTPGDSFSIRGGAGLEVVQ----------------GKVWVVYGFngceVDDvhyyDPVQDKWTQVETFGVRPSERSVF 371
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 239 TVTSGGHYLLLFGG--------HGTGGWLSrydvyyNDTIILDRVTAQWKRL-PIGNEPPPPR-----AYHTMTCIGARH 304
Cdd:PLN02193  372 ASAAVGKHIVIFGGeiamdplaHVGPGQLT------DGTFALDTETLQWERLdKFGEEEETPSsrgwtASTTGTIDGKKG 445
                         330       340
                  ....*....|....*....|.
gi 1063699361 305 LLIGGfdGKLT----FGDLWW 321
Cdd:PLN02193  446 LVMHG--GKAPtndrFDDLFF 464
Kelch_3 pfam13415
Galactose oxidase, central domain;
86-135 9.13e-08

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 48.44  E-value: 9.13e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063699361  86 DCHMFIFGG--RSGGKRLGDFWVLDTDIWQWSELtsfGDLPTPRDFAAAAAI 135
Cdd:pfam13415   1 GDKLYIFGGlgFDGQTRLNDLYVYDLDTNTWTQI---GDLPPPRSGHSATYI 49
Kelch smart00612
Kelch domain;
139-188 2.25e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 36.00  E-value: 2.25e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1063699361  139 KIVLCGGWDGKKWLSDVYVMDTMSLEWLELSvsgSLPPPRCGHTATMVEK 188
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLP---SMPTPRSGHGVAVING 47
 
Name Accession Description Interval E-value
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
17-309 6.12e-26

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 107.16  E-value: 6.12e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  17 PQARSGHTAVNVGkSMVVVFGGLVDKKFLSDIIVYDIENKLWFE-PECTGsesegqvgpTPRAFHVAITIDCHMFIFGGR 95
Cdd:COG3055    10 PTPRSEAAAALLD-GKVYVAGGLSGGSASNSFEVYDPATNTWSElAPLPG---------PPRHHAAAVAQDGKLYVFGGF 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  96 SGGKR----LGDFWVLDTDIWQWSELTSfgdLPTPRDFAAAAAIGSqKIVLCGGWDGKKWLSDVYVMDTMSLEWLELsvs 171
Cdd:COG3055    80 TGANPsstpLNDVYVYDPATNTWTKLAP---MPTPRGGATALLLDG-KIYVVGGWDDGGNVAWVEVYDPATGTWTQL--- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 172 GSLPPPRCGHTATMVEK-RLLVFGgrggggpimGDlwalkgliDEERETPGWTQLKlpgQAPSSRCGHTVTSGGHYLLLF 250
Cdd:COG3055   153 APLPTPRDHLAAAVLPDgKILVIG---------GR--------NGSGFSNTWTTLA---PLPTARAGHAAAVLGGKILVF 212
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1063699361 251 GGhgtggwlsrYDVYYNDTIILDRVTAQWKRLPignEPPPPRAYHTMTCIGARHLLIGG 309
Cdd:COG3055   213 GG---------ESGFSDEVEAYDPATNTWTALG---ELPTPRHGHAAVLTDGKVYVIGG 259
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
4-257 7.22e-23

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 98.30  E-value: 7.22e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361   4 WVQASSsdfsgtPPQARSGHTAVNVGKSMVVVFGGLVDKK----FLSDIIVYDIENKLWfepectgseSEGQVGPTPRAF 79
Cdd:COG3055    50 WSELAP------LPGPPRHHAAAVAQDGKLYVFGGFTGANpsstPLNDVYVYDPATNTW---------TKLAPMPTPRGG 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  80 HVAITIDCHMFIFGGRSGGKRLGDFWVLDTDIWQWSELtsfGDLPTPRDFAAAAAIGSQKIVLCGGWDGkkwlsdvyvmd 159
Cdd:COG3055   115 ATALLLDGKIYVVGGWDDGGNVAWVEVYDPATGTWTQL---APLPTPRDHLAAAVLPDGKILVIGGRNG----------- 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 160 tmSLEWLELSVSGSLPPPRCGHTATMVEKRLLVFGGRGGggpIMGDLWALkgliDEERETpgWTQLklpGQAPSSRCGH- 238
Cdd:COG3055   181 --SGFSNTWTTLAPLPTARAGHAAAVLGGKILVFGGESG---FSDEVEAY----DPATNT--WTAL---GELPTPRHGHa 246
                         250
                  ....*....|....*....
gi 1063699361 239 TVTSGGHyLLLFGGHGTGG 257
Cdd:COG3055   247 AVLTDGK-VYVIGGETKPG 264
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
74-327 1.96e-22

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 97.15  E-value: 1.96e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  74 PTPRAFHVAITIDCHMFIFGGRSGGKRLGDFWVLDTDIWQWSELTSFgdlPTPRDFAAAAAIGSQKIVLCGGWDGKKW-- 151
Cdd:COG3055    10 PTPRSEAAAALLDGKVYVAGGLSGGSASNSFEVYDPATNTWSELAPL---PGPPRHHAAAVAQDGKLYVFGGFTGANPss 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 152 --LSDVYVMDTMSLEWLELsvsGSLPPPRCGHTATMVEKRLLVFGGRGGGGPImGDLWALkglideERETPGWTQLklpG 229
Cdd:COG3055    87 tpLNDVYVYDPATNTWTKL---APMPTPRGGATALLLDGKIYVVGGWDDGGNV-AWVEVY------DPATGTWTQL---A 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 230 QAPSSRCGHT-VTSGGHYLLLFGGHGTGGWlsrydvyyndtiildrvTAQWKRLPignEPPPPRAYHTMTCIGARHLLIG 308
Cdd:COG3055   154 PLPTPRDHLAaAVLPDGKILVIGGRNGSGF-----------------SNTWTTLA---PLPTARAGHAAAVLGGKILVFG 213
                         250
                  ....*....|....*....
gi 1063699361 309 GFDGklTFGDLWWLVPEDD 327
Cdd:COG3055   214 GESG--FSDEVEAYDPATN 230
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
113-340 6.81e-19

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 86.75  E-value: 6.81e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 113 QWSELtsfGDLPTPRDFAAAAAIGSqKIVLCGGWDGKKWLSDVYVMDTMSLEWLELsvsGSLPPPRCGHTATMV-EKRLL 191
Cdd:COG3055     2 TWSSL---PDLPTPRSEAAAALLDG-KVYVAGGLSGGSASNSFEVYDPATNTWSEL---APLPGPPRHHAAAVAqDGKLY 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 192 VF---GGRGGGGPIMGDLWALkgliDEERETpgWTQLklpGQAPSSRCGHTVTSGGHYLLLFGGHGTGGWLSRYDVYynd 268
Cdd:COG3055    75 VFggfTGANPSSTPLNDVYVY----DPATNT--WTKL---APMPTPRGGATALLLDGKIYVVGGWDDGGNVAWVEVY--- 142
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063699361 269 tiilDRVTAQWKRLPignEPPPPRAYHTMTCIGARHLL-IGGFDGklTFGDLWWLVPEDDPIAKRSSVPQVVN 340
Cdd:COG3055   143 ----DPATGTWTQLA---PLPTPRDHLAAAVLPDGKILvIGGRNG--SGFSNTWTTLAPLPTARAGHAAAVLG 206
PLN02193 PLN02193
nitrile-specifier protein
14-321 1.11e-13

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 73.07  E-value: 1.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  14 GTPPQARSGHTAVNVGKSmVVVFGGL------VDKKflsdIIVYDIENKLWfepecTGSESEGQVgPTPRAFHV-AITID 86
Cdd:PLN02193  160 GEGPGLRCSHGIAQVGNK-IYSFGGEftpnqpIDKH----LYVFDLETRTW-----SISPATGDV-PHLSCLGVrMVSIG 228
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  87 CHMFIFGGRSGGKRLGDFWVLDTDIWQWSELTSFGDLPTPRDFAAAAAiGSQKIVLCGGWDGKKWLSDVYVMDTMSLEWL 166
Cdd:PLN02193  229 STLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKWF 307
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 167 ELSVSGSLPPPRCGHTATMVEkrllvfggrggggpimGDLWALKGL----IDE----ERETPGWTQLKLPGQAPSSRCGH 238
Cdd:PLN02193  308 HCSTPGDSFSIRGGAGLEVVQ----------------GKVWVVYGFngceVDDvhyyDPVQDKWTQVETFGVRPSERSVF 371
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 239 TVTSGGHYLLLFGG--------HGTGGWLSrydvyyNDTIILDRVTAQWKRL-PIGNEPPPPR-----AYHTMTCIGARH 304
Cdd:PLN02193  372 ASAAVGKHIVIFGGeiamdplaHVGPGQLT------DGTFALDTETLQWERLdKFGEEEETPSsrgwtASTTGTIDGKKG 445
                         330       340
                  ....*....|....*....|.
gi 1063699361 305 LLIGGfdGKLT----FGDLWW 321
Cdd:PLN02193  446 LVMHG--GKAPtndrFDDLFF 464
PLN02153 PLN02153
epithiospecifier protein
4-314 1.97e-13

epithiospecifier protein


Pssm-ID: 177814 [Multi-domain]  Cd Length: 341  Bit Score: 71.56  E-value: 1.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361   4 WVQASSSdfSGTPPQARSGHTAVNVGKSMVVVFGGLVDKKFL-SDIIVYDIENKLWfepecTGSESEGQVgPTPRAFHV- 81
Cdd:PLN02153    9 WIKVEQK--GGKGPGPRCSHGIAVVGDKLYSFGGELKPNEHIdKDLYVFDFNTHTW-----SIAPANGDV-PRISCLGVr 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361  82 AITIDCHMFIFGGRSGGKRLGDFWVLDTDIWQWSELTSFGDL--PTPRDFAAAAAIGSQKIVLCGGWDG-----KKWLSD 154
Cdd:PLN02153   81 MVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEggPEARTFHSMASDENHVYVFGGVSKGglmktPERFRT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 155 VYVMDTMSLEWLELSVSGSLPPPRCGHTATMVEKRL-LVFGGRGGGGPIMGDLWALKGLIDEERETPGWTQLKLPGQAPS 233
Cdd:PLN02153  161 IEAYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIwVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 234 SRCGHTVTSGGHYLLLFGG--------HGTGGWLSrydvyyNDTIILDRVTAQWKRLPIGNEPPPPR---AYHTMTCIGA 302
Cdd:PLN02153  241 ARSVFAHAVVGKYIIIFGGevwpdlkgHLGPGTLS------NEGYALDTETLVWEKLGECGEPAMPRgwtAYTTATVYGK 314
                         330
                  ....*....|..
gi 1063699361 303 RHLLIGGfdGKL 314
Cdd:PLN02153  315 NGLLMHG--GKL 324
NanM COG3055
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
4-162 3.18e-11

N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442289 [Multi-domain]  Cd Length: 277  Bit Score: 64.02  E-value: 3.18e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361   4 WVQASSsdfsgtPPQARSGHTAVNVGKSMVVVFGGLVDkkflsdiivyDIENKLWfepectgseSEGQVGPTPRAFHVAI 83
Cdd:COG3055   149 WTQLAP------LPTPRDHLAAAVLPDGKILVIGGRNG----------SGFSNTW---------TTLAPLPTARAGHAAA 203
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063699361  84 TIDCHMFIFGGRSGGkrLGDFWVLDTDIWQWSELtsfGDLPTPRDFAAAAAIGSQKIVLCGGWDGKKWLSDVYVMDTMS 162
Cdd:COG3055   204 VLGGKILVFGGESGF--SDEVEAYDPATNTWTAL---GELPTPRHGHAAVLTDGKVYVIGGETKPGVRTPLVTSAEVYD 277
Kelch_3 pfam13415
Galactose oxidase, central domain;
86-135 9.13e-08

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 48.44  E-value: 9.13e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063699361  86 DCHMFIFGG--RSGGKRLGDFWVLDTDIWQWSELtsfGDLPTPRDFAAAAAI 135
Cdd:pfam13415   1 GDKLYIFGGlgFDGQTRLNDLYVYDLDTNTWTQI---GDLPPPRSGHSATYI 49
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
76-121 1.33e-06

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 45.30  E-value: 1.33e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1063699361  76 PRAFHVAITIDCHMFIFGGRSGGKRLGDFWVLDTDIWQWSELTSFG 121
Cdd:pfam01344   1 RRSGAGVVVVGGKIYVIGGFDGNQSLNSVEVYDPETNTWSKLPSMP 46
Kelch_4 pfam13418
Galactose oxidase, central domain;
19-58 1.59e-06

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 44.91  E-value: 1.59e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1063699361  19 ARSGHTAVNVGKSMVVVFGGLVDK-KFLSDIIVYDIENKLW 58
Cdd:pfam13418   1 PRAYHTSTSIPDDTIYLFGGEGEDgTLLSDLWVFDLSTNEW 41
PLN02193 PLN02193
nitrile-specifier protein
164-298 1.97e-06

nitrile-specifier protein


Pssm-ID: 177844 [Multi-domain]  Cd Length: 470  Bit Score: 50.34  E-value: 1.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063699361 164 EWLELSVSGSLPPPRCGHTATMVEKRLLVFGGRGG-GGPIMGDLWALkglideERETPGWTQLKLPGQAPSSRC-GHTVT 241
Cdd:PLN02193  152 KWIKVEQKGEGPGLRCSHGIAQVGNKIYSFGGEFTpNQPIDKHLYVF------DLETRTWSISPATGDVPHLSClGVRMV 225
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1063699361 242 SGGHYLLLFGGHGTGgwlSRYDVYYNdtiiLDRVTAQWKRLPIGNEPPPPRAYHTMT 298
Cdd:PLN02193  226 SIGSTLYVFGGRDAS---RQYNGFYS----FDTTTNEWKLLTPVEEGPTPRSFHSMA 275
Kelch_3 pfam13415
Galactose oxidase, central domain;
244-298 3.87e-06

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 43.82  E-value: 3.87e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1063699361 244 GHYLLLFGGHGTGGwlsryDVYYNDTIILDRVTAQWKRLPignEPPPPRAYHTMT 298
Cdd:pfam13415   1 GDKLYIFGGLGFDG-----QTRLNDLYVYDLDTNTWTQIG---DLPPPRSGHSAT 47
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
126-169 9.83e-05

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 39.90  E-value: 9.83e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1063699361 126 PRDFAAAAAIGsQKIVLCGGWDGKKWLSDVYVMDTMSLEWLELS 169
Cdd:pfam01344   1 RRSGAGVVVVG-GKIYVIGGFDGNQSLNSVEVYDPETNTWSKLP 43
Kelch_1 pfam01344
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
19-58 2.82e-04

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 396078 [Multi-domain]  Cd Length: 46  Bit Score: 38.75  E-value: 2.82e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1063699361  19 ARSGHTAVNVGkSMVVVFGGLVDKKFLSDIIVYDIENKLW 58
Cdd:pfam01344   1 RRSGAGVVVVG-GKIYVIGGFDGNQSLNSVEVYDPETNTW 39
Kelch_3 pfam13415
Galactose oxidase, central domain;
138-184 4.04e-04

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 38.04  E-value: 4.04e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 1063699361 138 QKIVLCGGWD--GKKWLSDVYVMDTMSLEWLELsvsGSLPPPRCGHTAT 184
Cdd:pfam13415   2 DKLYIFGGLGfdGQTRLNDLYVYDLDTNTWTQI---GDLPPPRSGHSAT 47
Kelch_6 pfam13964
Kelch motif;
76-127 4.79e-04

Kelch motif;


Pssm-ID: 404790 [Multi-domain]  Cd Length: 50  Bit Score: 38.09  E-value: 4.79e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063699361  76 PRAFHVAITIDCHMFIFGGRS-GGKRLGDFWVLDTDIWQWSELtsfGDLPTPR 127
Cdd:pfam13964   1 PRTFHSVVSVGGYIYVFGGYTnASPALNKLEVYNPLTKSWEEL---PPLPTPR 50
Kelch_4 pfam13418
Galactose oxidase, central domain;
76-125 7.86e-04

Galactose oxidase, central domain;


Pssm-ID: 433191 [Multi-domain]  Cd Length: 49  Bit Score: 37.21  E-value: 7.86e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1063699361  76 PRAFHVAITIDCHM-FIFGGRSG-GKRLGDFWVLDTDIWQWSELtsfGDLPT 125
Cdd:pfam13418   1 PRAYHTSTSIPDDTiYLFGGEGEdGTLLSDLWVFDLSTNEWTRL---GSLPS 49
Kelch smart00612
Kelch domain;
139-188 2.25e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 36.00  E-value: 2.25e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1063699361  139 KIVLCGGWDGKKWLSDVYVMDTMSLEWLELSvsgSLPPPRCGHTATMVEK 188
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLP---SMPTPRSGHGVAVING 47
Kelch_5 pfam13854
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ...
74-110 2.38e-03

Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.


Pssm-ID: 433528 [Multi-domain]  Cd Length: 41  Bit Score: 35.62  E-value: 2.38e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1063699361  74 PTPRAFHVAITIDCHMFIFGGRSG--GKRLGDFWVLDTD 110
Cdd:pfam13854   1 PVPRYGHCAVTVGDYIYLYGGYTGgeGQPSDDVYVLSLP 39
Kelch smart00612
Kelch domain;
88-136 2.41e-03

Kelch domain;


Pssm-ID: 128874 [Multi-domain]  Cd Length: 47  Bit Score: 36.00  E-value: 2.41e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*....
gi 1063699361   88 HMFIFGGRSGGKRLGDFWVLDTDIWQWSELTSfgdLPTPRDFAAAAAIG 136
Cdd:smart00612   1 KIYVVGGFDGGQRLKSVEVYDPETNKWTPLPS---MPTPRSGHGVAVIN 46
Kelch_3 pfam13415
Galactose oxidase, central domain;
30-80 4.75e-03

Galactose oxidase, central domain;


Pssm-ID: 433188 [Multi-domain]  Cd Length: 49  Bit Score: 35.34  E-value: 4.75e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1063699361  30 KSMVVVFGGLVDK--KFLSDIIVYDIENKLWFEpecTGSesegqvGPTPRAFH 80
Cdd:pfam13415   1 GDKLYIFGGLGFDgqTRLNDLYVYDLDTNTWTQ---IGD------LPPPRSGH 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH