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Conserved domains on  [gi|1061385149|ref|NP_001317730|]
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Amidase domain-containing protein [Caenorhabditis elegans]

Protein Classification

amidase( domain architecture ID 139642)

amidase catalyzes the hydrolysis of an amide

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Amidase super family cl18951
Amidase;
114-597 1.00e-93

Amidase;


The actual alignment was detected with superfamily member pfam01425:

Pssm-ID: 450241 [Multi-domain]  Cd Length: 442  Bit Score: 296.13  E-value: 1.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 114 VLSAYVWRAIKINRKINC-ITEVIKEAFTDAARLDDEY-REQPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTT 191
Cdd:pfam01425   2 LVEAFLDRIEAANPKLNAfVTVFFDEALAQAAAADKQRaAGDPKGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPYD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 192 CSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAA 271
Cdd:pfam01425  82 ATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 272 FCGLVSLKPTQDRLHesemHPGLPGRGrLGYSC-GFFTRNVEDQEYLLRLVIGkpeYQQMSPYSSLSPLLDTSSDDK--- 347
Cdd:pfam01425 162 FCGLVGLKPTYGRVS----RYGVVGYA-SSLDQvGPLARSVEDAALLLRVISG---YDPKDSTSLPPPVPDYAEPVKksl 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 348 RKPVIGWFVDDGFCSVSPSNQRAVEETIGKLKELGYEVKEFKVNDID----------TKFHSHAVADMLFRNVMPDNGEY 417
Cdd:pfam01425 234 KGLRIGVYREDGYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDyalplyyliaPAEASSNLARYDGVPSGPDDLSE 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 418 MSEMYGSEPYDRYMSHFIrlvrykqvfvIRWlaQHVLLPLAQYTPLKSKQVlclgkaynsdpacVRQNqektdsYKMKWI 497
Cdd:pfam01425 314 LYPRTRAEGLGDEVKRRI----------ILG--NYALSAGYYDKYYLKAQK-------------VRRL------IRREFA 362

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 498 RYWKGLgiDALICPSFITPA----QPFKYPvllttgafiTGLFNMLDCPSAVVPVApvrekendkfetngdfVLKLQAAA 573
Cdd:pfam01425 363 GLFEEL--DVLLSPTAPTPAprlgEPDDSP---------LVMYNLDDFTAGVVPVN----------------LAGLPAIS 415

                         490       500
                  ....*....|....*....|....*..
gi 1061385149 574 I---KETSGMPNSVQIVALPNQEEMCL 597
Cdd:pfam01425 416 LpagFTADGLPVGVQIIGKPGDEETLL 442
 
Name Accession Description Interval E-value
Amidase pfam01425
Amidase;
114-597 1.00e-93

Amidase;


Pssm-ID: 396144 [Multi-domain]  Cd Length: 442  Bit Score: 296.13  E-value: 1.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 114 VLSAYVWRAIKINRKINC-ITEVIKEAFTDAARLDDEY-REQPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTT 191
Cdd:pfam01425   2 LVEAFLDRIEAANPKLNAfVTVFFDEALAQAAAADKQRaAGDPKGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPYD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 192 CSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAA 271
Cdd:pfam01425  82 ATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 272 FCGLVSLKPTQDRLHesemHPGLPGRGrLGYSC-GFFTRNVEDQEYLLRLVIGkpeYQQMSPYSSLSPLLDTSSDDK--- 347
Cdd:pfam01425 162 FCGLVGLKPTYGRVS----RYGVVGYA-SSLDQvGPLARSVEDAALLLRVISG---YDPKDSTSLPPPVPDYAEPVKksl 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 348 RKPVIGWFVDDGFCSVSPSNQRAVEETIGKLKELGYEVKEFKVNDID----------TKFHSHAVADMLFRNVMPDNGEY 417
Cdd:pfam01425 234 KGLRIGVYREDGYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDyalplyyliaPAEASSNLARYDGVPSGPDDLSE 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 418 MSEMYGSEPYDRYMSHFIrlvrykqvfvIRWlaQHVLLPLAQYTPLKSKQVlclgkaynsdpacVRQNqektdsYKMKWI 497
Cdd:pfam01425 314 LYPRTRAEGLGDEVKRRI----------ILG--NYALSAGYYDKYYLKAQK-------------VRRL------IRREFA 362

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 498 RYWKGLgiDALICPSFITPA----QPFKYPvllttgafiTGLFNMLDCPSAVVPVApvrekendkfetngdfVLKLQAAA 573
Cdd:pfam01425 363 GLFEEL--DVLLSPTAPTPAprlgEPDDSP---------LVMYNLDDFTAGVVPVN----------------LAGLPAIS 415

                         490       500
                  ....*....|....*....|....*..
gi 1061385149 574 I---KETSGMPNSVQIVALPNQEEMCL 597
Cdd:pfam01425 416 LpagFTADGLPVGVQIIGKPGDEETLL 442
GatA COG0154
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ...
 95-615 1.14e-73

Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases


Pssm-ID: 439924 [Multi-domain]  Cd Length: 468  Bit Score: 244.29  E-value: 1.14e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  95 MDFPTLREALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKE-AFTDAARLDDEYRE-QPKPPLFGIPFSVKSNFYVT 172
Cdd:COG0154     7 LSAAELAAALRAGEVSAVELVEAALARIEAVNPALNAFVTVDAErALAEARAADARRAAgEALGPLAGVPVAVKDLIDVA 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 173 GYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAG 252
Cdd:COG0154    87 GLPTTAGSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFAMGGSTENSAYGPTRNPWDPDRTPGGSSGGSAAAVAAG 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 253 GTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRlhesemhpgLPGRGRLGYS-----CGFFTRNVEDQEYLLRLVIGkpeY 327
Cdd:COG0154   167 LVPLALGSDTGGSIRIPAAFCGLVGLKPTYGR---------VSRYGVVPLAssldqVGPLARTVADAALLLDVLAG---P 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 328 QQMSPYSSLSP---LLDTSSDDKRKPVIGWFVD-DGFCSVSPSNQRAVEETIGKLKELGYEVKEFKVNDIDtkfHSHAVA 403
Cdd:COG0154   235 DPRDPTSAPAPvpdYLAALDRDLKGLRIGVPREyFGGDGVDPEVAAAVEAAAAALEALGAEVVEVDLPDLD---EALAAY 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 404 DMLFrnvmpdngeyMSEMYgsepydrymshfirlvrykqvfviRWLAQHVLLPLAQYTPLkSKQVLCLGKAYnsDPACVR 483
Cdd:COG0154   312 YTIA----------AAEAA------------------------ANLADLLRTRPEGFGPE-VRRRILLGAYY--SAADYL 354

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 484 QNQEKTDSYKMKWIRYWKglGIDALICPSfiTPAQPFK-----------YPVLLTTGAFiTGLFNMLDCPSAVVPVAPVR 552
Cdd:COG0154   355 KAQRVRALLRRDFAAAFE--DYDVLLTPT--TPTPAPPigeldadidpaLAMNYLLDRF-TAPANLAGLPALSVPAGFTA 429

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1061385149 553 EkendkfetngdfvlklqaaaiketsGMPNSVQIVALPNQEEMCLKVMRIVEeisegvQVLRW 615
Cdd:COG0154   430 D-------------------------GLPVGLQLIGPPGDEATLLRLAAALE------QALGW 461
PRK06170 PRK06170
amidase; Provisional
 96-323 4.42e-42

amidase; Provisional


Pssm-ID: 235723 [Multi-domain]  Cd Length: 490  Bit Score: 159.04  E-value: 4.42e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  96 DFPTLRE---ALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKEAFTDAARLDDEYREQ-PKPPLFGIPFSVKSNFYV 171
Cdd:PRK06170   10 SFLPATElaaALAAGEVSSVELTDLAIARIERHDGKINAIVVRDFDRARAAARAADAARARgERGPLLGIPVTVKESFNV 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 172 TGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAA 251
Cdd:PRK06170   90 AGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDLARTPGGSSGGSAAALAA 169

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1061385149 252 GGTVFGIGNDLVGSLRIPAAFCGLVSLKPT----QDRLHESEMHPGLPGRGRLGYScGFFTRNVEDQEYLLRLVIG 323
Cdd:PRK06170  170 GFGALSIGSDIGGSLRVPAHYCGVYAHKPTlglvPLRGHIPPPAPALPGQADLAVA-GPMARSARDLALLLDVMAG 244
gatA TIGR00132
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ...
 100-394 1.79e-41

aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]


Pssm-ID: 272925 [Multi-domain]  Cd Length: 460  Bit Score: 156.73  E-value: 1.79e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 100 LREALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKE-AFTDAARLDDEYREqpkpPLFGIPFSVKSNFYVTGYEATV 178
Cdd:TIGR00132   1 LRQLLKKKEISIKEVLEASLDRIEANKDKINAFLEVTVEkALKQAKKLDKAILT----PLAGIPIAVKDNISTKGIVTTC 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 179 GLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGI 258
Cdd:TIGR00132  77 ASKILENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 259 GNDLVGSLRIPAAFCGLVSLKPTQdrlhesemhpGLPGR-GRLGYS-----CGFFTRNVEDQEYLLRLVIGkpeYQQMSP 332
Cdd:TIGR00132 157 GSDTGGSIRQPASFCGVVGFKPTY----------GRVSRyGLVAYAssldqIGPFARTVEDIALLLDVISG---HDKRDS 223

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1061385149 333 YSSLSPLLDTSSDDKR----------KPVIGWFvDDGFcsvspsnQRAVEETIGKLKELGYEVKEFKVNDID 394
Cdd:TIGR00132 224 TSAKVPDPEFFEELKKdlkglkvgvvKEFSEEM-DKEV-------QEKFENALEVLEELGAEIVEVSFPHVK 287
 
Name Accession Description Interval E-value
Amidase pfam01425
Amidase;
114-597 1.00e-93

Amidase;


Pssm-ID: 396144 [Multi-domain]  Cd Length: 442  Bit Score: 296.13  E-value: 1.00e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 114 VLSAYVWRAIKINRKINC-ITEVIKEAFTDAARLDDEY-REQPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTT 191
Cdd:pfam01425   2 LVEAFLDRIEAANPKLNAfVTVFFDEALAQAAAADKQRaAGDPKGPLHGVPIAVKDNIDVKGVPTTAGSKALENYPAPYD 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 192 CSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAA 271
Cdd:pfam01425  82 ATVVERLRKAGAVILGKTNMDEFAMGSSTENSVFGPTRNPWDLSRTPGGSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 272 FCGLVSLKPTQDRLHesemHPGLPGRGrLGYSC-GFFTRNVEDQEYLLRLVIGkpeYQQMSPYSSLSPLLDTSSDDK--- 347
Cdd:pfam01425 162 FCGLVGLKPTYGRVS----RYGVVGYA-SSLDQvGPLARSVEDAALLLRVISG---YDPKDSTSLPPPVPDYAEPVKksl 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 348 RKPVIGWFVDDGFCSVSPSNQRAVEETIGKLKELGYEVKEFKVNDID----------TKFHSHAVADMLFRNVMPDNGEY 417
Cdd:pfam01425 234 KGLRIGVYREDGYFDLDPEVRRAVEEALAQLEALGHEVVEVDPPSLDyalplyyliaPAEASSNLARYDGVPSGPDDLSE 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 418 MSEMYGSEPYDRYMSHFIrlvrykqvfvIRWlaQHVLLPLAQYTPLKSKQVlclgkaynsdpacVRQNqektdsYKMKWI 497
Cdd:pfam01425 314 LYPRTRAEGLGDEVKRRI----------ILG--NYALSAGYYDKYYLKAQK-------------VRRL------IRREFA 362

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 498 RYWKGLgiDALICPSFITPA----QPFKYPvllttgafiTGLFNMLDCPSAVVPVApvrekendkfetngdfVLKLQAAA 573
Cdd:pfam01425 363 GLFEEL--DVLLSPTAPTPAprlgEPDDSP---------LVMYNLDDFTAGVVPVN----------------LAGLPAIS 415

                         490       500
                  ....*....|....*....|....*..
gi 1061385149 574 I---KETSGMPNSVQIVALPNQEEMCL 597
Cdd:pfam01425 416 LpagFTADGLPVGVQIIGKPGDEETLL 442
GatA COG0154
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal ...
 95-615 1.14e-73

Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase [Translation, ribosomal structure and biogenesis]; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases


Pssm-ID: 439924 [Multi-domain]  Cd Length: 468  Bit Score: 244.29  E-value: 1.14e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  95 MDFPTLREALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKE-AFTDAARLDDEYRE-QPKPPLFGIPFSVKSNFYVT 172
Cdd:COG0154     7 LSAAELAAALRAGEVSAVELVEAALARIEAVNPALNAFVTVDAErALAEARAADARRAAgEALGPLAGVPVAVKDLIDVA 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 173 GYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAG 252
Cdd:COG0154    87 GLPTTAGSKALADFVPPYDATVVARLRAAGAVILGKTNMPEFAMGGSTENSAYGPTRNPWDPDRTPGGSSGGSAAAVAAG 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 253 GTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRlhesemhpgLPGRGRLGYS-----CGFFTRNVEDQEYLLRLVIGkpeY 327
Cdd:COG0154   167 LVPLALGSDTGGSIRIPAAFCGLVGLKPTYGR---------VSRYGVVPLAssldqVGPLARTVADAALLLDVLAG---P 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 328 QQMSPYSSLSP---LLDTSSDDKRKPVIGWFVD-DGFCSVSPSNQRAVEETIGKLKELGYEVKEFKVNDIDtkfHSHAVA 403
Cdd:COG0154   235 DPRDPTSAPAPvpdYLAALDRDLKGLRIGVPREyFGGDGVDPEVAAAVEAAAAALEALGAEVVEVDLPDLD---EALAAY 311

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 404 DMLFrnvmpdngeyMSEMYgsepydrymshfirlvrykqvfviRWLAQHVLLPLAQYTPLkSKQVLCLGKAYnsDPACVR 483
Cdd:COG0154   312 YTIA----------AAEAA------------------------ANLADLLRTRPEGFGPE-VRRRILLGAYY--SAADYL 354

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 484 QNQEKTDSYKMKWIRYWKglGIDALICPSfiTPAQPFK-----------YPVLLTTGAFiTGLFNMLDCPSAVVPVAPVR 552
Cdd:COG0154   355 KAQRVRALLRRDFAAAFE--DYDVLLTPT--TPTPAPPigeldadidpaLAMNYLLDRF-TAPANLAGLPALSVPAGFTA 429

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1061385149 553 EkendkfetngdfvlklqaaaiketsGMPNSVQIVALPNQEEMCLKVMRIVEeisegvQVLRW 615
Cdd:COG0154   430 D-------------------------GLPVGLQLIGPPGDEATLLRLAAALE------QALGW 461
PRK06170 PRK06170
amidase; Provisional
 96-323 4.42e-42

amidase; Provisional


Pssm-ID: 235723 [Multi-domain]  Cd Length: 490  Bit Score: 159.04  E-value: 4.42e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  96 DFPTLRE---ALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKEAFTDAARLDDEYREQ-PKPPLFGIPFSVKSNFYV 171
Cdd:PRK06170   10 SFLPATElaaALAAGEVSSVELTDLAIARIERHDGKINAIVVRDFDRARAAARAADAARARgERGPLLGIPVTVKESFNV 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 172 TGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAA 251
Cdd:PRK06170   90 AGLPTTWGFPDLRDYVPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDLARTPGGSSGGSAAALAA 169

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1061385149 252 GGTVFGIGNDLVGSLRIPAAFCGLVSLKPT----QDRLHESEMHPGLPGRGRLGYScGFFTRNVEDQEYLLRLVIG 323
Cdd:PRK06170  170 GFGALSIGSDIGGSLRVPAHYCGVYAHKPTlglvPLRGHIPPPAPALPGQADLAVA-GPMARSARDLALLLDVMAG 244
gatA TIGR00132
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase ...
 100-394 1.79e-41

aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; In many species, Gln--tRNA ligase is missing. tRNA(Gln) is misacylated with Glu after which a heterotrimeric amidotransferase converts Glu to Gln. This model represents the amidase chain of that heterotrimer, encoded by the gatA gene. In the Archaea, Asn--tRNA ligase is also missing. This amidase subunit may also function in the conversion of Asp-tRNA(Asn) to Asn-tRNA(Asn), presumably with a different recognition unit to replace gatB. Both Methanococcus jannaschii and Methanobacterium thermoautotrophicum have both authentic gatB and a gatB-related gene, but only one gene like gatA. It has been shown that gatA can be expressed only when gatC is also expressed. In most species expressing the amidotransferase, the gatC ortholog is about 90 residues in length, but in Mycoplasma genitalium and Mycoplasma pneumoniae the gatC equivalent is as the C-terminal domain of a much longer protein. Not surprisingly, the Mycoplasmas also represent the most atypical lineage of gatA orthology. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species. [Protein synthesis, tRNA aminoacylation]


Pssm-ID: 272925 [Multi-domain]  Cd Length: 460  Bit Score: 156.73  E-value: 1.79e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 100 LREALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKE-AFTDAARLDDEYREqpkpPLFGIPFSVKSNFYVTGYEATV 178
Cdd:TIGR00132   1 LRQLLKKKEISIKEVLEASLDRIEANKDKINAFLEVTVEkALKQAKKLDKAILT----PLAGIPIAVKDNISTKGIVTTC 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 179 GLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGI 258
Cdd:TIGR00132  77 ASKILENYIPPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSL 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 259 GNDLVGSLRIPAAFCGLVSLKPTQdrlhesemhpGLPGR-GRLGYS-----CGFFTRNVEDQEYLLRLVIGkpeYQQMSP 332
Cdd:TIGR00132 157 GSDTGGSIRQPASFCGVVGFKPTY----------GRVSRyGLVAYAssldqIGPFARTVEDIALLLDVISG---HDKRDS 223

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1061385149 333 YSSLSPLLDTSSDDKR----------KPVIGWFvDDGFcsvspsnQRAVEETIGKLKELGYEVKEFKVNDID 394
Cdd:TIGR00132 224 TSAKVPDPEFFEELKKdlkglkvgvvKEFSEEM-DKEV-------QEKFENALEVLEELGAEIVEVSFPHVK 287
PRK09201 PRK09201
AtzE family amidohydrolase;
95-355 4.92e-36

AtzE family amidohydrolase;


Pssm-ID: 236409 [Multi-domain]  Cd Length: 465  Bit Score: 141.26  E-value: 4.92e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  95 MDFPTLREALQSEKFNAYTVLSAYVWRAIKINRKINCITEVIKE-AFTDAARLDDEYRE-QPKPPLFGIPFSVKSNFYVT 172
Cdd:PRK09201    7 LSAAEIAAAVRAGELSARAVAQATLARIARANPQLNAFTAVTAErALAEAARIDAARAAgEPLGPLAGVPFAVKNLFDVA 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 173 GyEATVGLASLLEQRETTT--CSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLA 250
Cdd:PRK09201   87 G-LTTLAGSKINRDRPPATrdATAVRRLEAAGAVLVGALNMDEYAYGFTTENSHYGATRNPHDLTRIAGGSSGGSAAAVA 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 251 AGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLHESEMHPGLPGRGRLGYscgfFTRNVEDqeylLRLVI----GKPE 326
Cdd:PRK09201  166 AGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGP----FARSVAD----LALVYdvlqGPDP 237

                         250       260       270
                  ....*....|....*....|....*....|...
gi 1061385149 327 ---YQQMSPYSSLSPLLDTSSDDKRKPVI-GWF 355
Cdd:PRK09201  238 qdpFQADRPAEPTAPLLDRGAEGLRIAVLgGYF 270
PRK07488 PRK07488
indoleacetamide hydrolase;
100-336 2.61e-34

indoleacetamide hydrolase;


Pssm-ID: 236030 [Multi-domain]  Cd Length: 472  Bit Score: 136.25  E-value: 2.61e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 100 LREALQSEKFNAYTVLSAYVWRAiKINRKINCITEVIKEAFTDAARLDDEYREQ-PKPPLFGIPFSVKSNFYVTGYEATV 178
Cdd:PRK07488   16 AAAALRSGRLSCLELVEALLARA-AALAPLNAFTTVDAEGALAAARRIDAQRAAgAALLLAGVPIVIKDNINTAGMPTTA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 179 GLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQglLSY-ITS-NPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVF 256
Cdd:PRK07488   95 GTPALLGFVPATDAPVVQRLLDAGAVPLGKANMHE--LAFgITSnNGAFGAVRNPYDPARIAGGSSGGTAAAVAARLAPA 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 257 GIGNDLVGSLRIPAAFCGLVSLKPTQDRlhesemhpgLPGRGRLGYSC-----GFFTRNVEDQEYLLRLVIGKPEYQQMS 331
Cdd:PRK07488  173 GLGTDTGGSVRIPAALCGVVGLRPTVGR---------YSGDGVVPISHtrdtvGPIARSVADLALLDAVITGDAALPAPV 243


                  ....*
gi 1061385149 332 PYSSL 336
Cdd:PRK07488  244 ALAGL 248
PRK06169 PRK06169
putative amidase; Provisional
 121-387 1.41e-32

putative amidase; Provisional


Pssm-ID: 180437 [Multi-domain]  Cd Length: 466  Bit Score: 131.30  E-value: 1.41e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 121 RAIKINRKINCITEVIKEAFTDAARLDDE--YREQPKPPLFGIPFSVKSNFYVTGYEATVG-LASLLEQRETTTCSLVKF 197
Cdd:PRK06169   33 RIDRRDPAVNAFCLVDAEGALAAARASEErwRRGEPCGLLDGVPVSIKDIFLTRGWPTLRGsRAIDADGPWDVDAPAVAR 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 198 LKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVS 277
Cdd:PRK06169  113 LREAGAVLLGKTTTPEFGWKGVTDSPLYGITRNPWDTRLTAGGSSGGAAAAVALGMGPLSVGTDGGGSVRIPASFCGTFG 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 278 LKPTQDRLhesEMHPGLPgRGRLGYScGFFTRNVEDQEYLLRlVIGKPEYQQ---MSPYSslSPLLDTSSDDKRKPVIGW 354
Cdd:PRK06169  193 FKPTFGRV---PLYPASP-FGTLAHV-GPMTRTVADAALLLD-VIARPDARDwsaLPPPT--TSFLDALDRDVRGLRIAY 264

                         250       260       270
                  ....*....|....*....|....*....|...
gi 1061385149 355 FVDDGFCSVSPSNQRAVEETIGKLKELGYEVKE 387
Cdd:PRK06169  265 SPTLGYVDVDPEVAALVAQAVQRLAALGARVEE 297
PRK07487 PRK07487
amidase; Provisional
 125-387 4.07e-32

amidase; Provisional


Pssm-ID: 236029 [Multi-domain]  Cd Length: 469  Bit Score: 130.09  E-value: 4.07e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 125 INRKINCITEVI-KEAFTDAARLDDEYREQPKP-PLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTTCSLVKFLKNQG 202
Cdd:PRK07487   38 VNPAINAVVDHRpEEALAQADAVDAARARGDDPgPLAGVPVTVKVNVDQAGFATTNGVRLQKDLIAPADSPVVDNLRKAG 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 203 AIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQ 282
Cdd:PRK07487  118 AVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTL 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 283 DRLheSEMHPGLPGRGRLGYSC---GFFTRNVEDqeylLRLvigkpeyqqmspysSLSPLldtSSDDKRKPvigWFVD-- 357
Cdd:PRK07487  198 GRV--PAYNASSPERPIGAQLMsvqGPLARTVAD----LRL--------------ALAAM---AAPDPRDP---WWVPap 251

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1061385149 358 ----------------DGFcSVSPSNQRAVEETIGKLKELGYEVKE 387
Cdd:PRK07487  252 legpprpkrvalcvrpDGL-DVDPEVEAALRDAARRLEDAGWTVEE 296
PRK12470 PRK12470
amidase; Provisional
 104-387 5.16e-32

amidase; Provisional


Pssm-ID: 171524 [Multi-domain]  Cd Length: 462  Bit Score: 129.62  E-value: 5.16e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 104 LQSEKFNAYTVLSAYVWRAIKINRKINCITEVI-KEAFTDAARLDDEYREQPKPPLFGIPFSVKSNFYVTGYEATVGLAS 182
Cdd:PRK12470   18 LADGELTAPMLLEVYLQRIERLDSHLRAYRVVLfDRARAEAEAAQQRLDAGERLPLLGVPIAIKDDVDVAGEVTTYGSAG 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 183 LlEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDL 262
Cdd:PRK12470   98 H-GPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 263 VGSLRIPAAFCGLVSLKPTQDRLhESEMHPGLpGRGrLGYScGFFTRNVEDQEYLLRLVIGKPEYQqmspysslSPLLDT 342
Cdd:PRK12470  177 GGSIRIPSTWCGLFGLKPQRDRI-SLEPHDGA-WQG-LSVN-GPIARSVMDAALLLDATTTVPGPE--------GEFVAA 244

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1061385149 343 SSDDKRKPVIGWFVDDGF---CSVSPSNQRAVEETIGKLKELGYEVKE 387
Cdd:PRK12470  245 AAREPGRLRIALSTRVPTplpVRCGKQELAAVHQAGALLRDLGHDVVV 292
PRK07869 PRK07869
amidase; Provisional
 95-397 2.73e-31

amidase; Provisional


Pssm-ID: 181154 [Multi-domain]  Cd Length: 468  Bit Score: 127.41  E-value: 2.73e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  95 MDFPTLREALQSEKFNAYTVLSAYVWRAIKINRKINCITEvikEAFTDAarlddeyREQPKPPLF------GIPFSVKSN 168
Cdd:PRK07869   15 LDAVGLAEAIRAGRVSAAEVVEAAIARAEAVNPALNALAY---AAFDRA-------RDRAARPGSqggffsGVPTFIKDN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 169 FYVTGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAAL 248
Cdd:PRK07869   85 VDVAGLPTMHGSDAWTPRPAKADSDFARQFLATGLISLGKTQLPEFGFSASTEHPRLGPVRNPWNTDYSAGASSGGSAAL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 249 LAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLHESEMHPGLPGRgrlGYSCGFFTRNVEDQEYLLRlvigkpEYQ 328
Cdd:PRK07869  165 VAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLPVN---IVANGVLTRTVRDTAAFYR------EAE 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 329 QMSPYSSLSPLLDTSSDDKRKPVIGWFVDDGFCS-VSPSNQRAVEETIGKLKELGYEVkEFKVNDIDTKF 397
Cdd:PRK07869  236 RYYRNPKLPPIGDVTGPGKQRLRIAVVTDSVTGReADPEVREAVLATARLLEELGHRV-EPVDLPVPASF 304
PRK07486 PRK07486
amidase; Provisional
 92-385 5.98e-28

amidase; Provisional


Pssm-ID: 236028 [Multi-domain]  Cd Length: 484  Bit Score: 117.81  E-value: 5.98e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  92 VLAMDFPTLREALQSEKFNAYTVLSAYVWRAIKINRKINCI-----TEVIKEaftDAARLDDEY-REQPKPPLFGIPFSV 165
Cdd:PRK07486    9 IVRLSAHALSRAIRRRQVSCVEVMRAYLAHIERVNPAVNAIvalrdRDALLA---EAAEKDAALaRGEYRGWLHGMPQAP 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 166 KSNFYVTGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQ-GLLSYiTSNPVYGTTKNPWDFSRTPGGSSGG 244
Cdd:PRK07486   86 KDLAPTKGIRTTLGSPIFADQVPQEDAIVVERMRAAGAIFIGKTNTPEfGLGSH-TYNPVYGATRNPYDPSRSAGGSSGG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 245 EAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLhesemhPGLPGRG----RLGYScGFFTRNVEDQEYLLRL 320
Cdd:PRK07486  165 AAAALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRV------PHGPGGDvfvqQLGTE-GPMGRTVEDVALLLAV 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1061385149 321 VIGkpeYQQMSPYSSLSPLLDTSSD---DKRKPVIGWFVD-DGFCSVSPSNQRAVEETIGKLKELGYEV 385
Cdd:PRK07486  238 QAG---YDPRDPLSLAEDPARFAQPleaDLRGKRIAWLGDwGGYLPMEAGVLELCEAALATLRELGCDV 303
PRK06529 PRK06529
amidase; Provisional
 88-424 8.82e-27

amidase; Provisional


Pssm-ID: 180608 [Multi-domain]  Cd Length: 482  Bit Score: 114.15  E-value: 8.82e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  88 TFQTVLAMdfptlREALQSEKFNAYTVLSAYVWRAIKINRKINCIT-EVIKEAFTDAarlddEYREQPKPPLFGIPFSVK 166
Cdd:PRK06529    2 TYKDATAM-----AQAVQQGQVTPLELVTQAIYKAKKLNPTLNAIVsERYEEALEEA-----KQRDFSGKPFAGVPIFLK 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 167 S-NFYVTGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWDFSRTPGGSSGGE 245
Cdd:PRK06529   72 DlGQELKGQLSTSGSRLFKNYQATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGA 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 246 AALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLhesemhPGLPG--RGRLGYSCGF-FTRNVEDQEYLLRLVi 322
Cdd:PRK06529  152 AALVSSGIVALAAASDGGGSIRIPASFNGLIGLKPSRGRI------PVGPGsyRGWQGASVHFaLTKSVRDTRRLLYYL- 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 323 gkPEYQQMSPYsslsPLLDTSSDD-----KRKPVIGWFVDDGFCS-VSPSNQRAVEETIGKLKELGYEVKEFK------- 389
Cdd:PRK06529  225 --QMYQMESPF----PLATLSKESlfqslQRPLKIAFYQRSPDGSpVSLDAAKALKQAVTFLREQGHEVVELEefpldmt 298

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1061385149 390 --------VNDIDTKFHSHAVADMLFRNVMPDNGEYMS-EMYGS 424
Cdd:PRK06529  299 evmrsyyiMNSVETAAMFDDIEDALGRPMTKDDMETMTwAIYQS 342
PRK06061 PRK06061
amidase; Provisional
 137-323 7.68e-26

amidase; Provisional


Pssm-ID: 235686 [Multi-domain]  Cd Length: 483  Bit Score: 111.33  E-value: 7.68e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 137 KEAFTDAARLDDEYREQPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQReTTTCSLVKFLKNQGAIPFCLTNLPQGLL 216
Cdd:PRK06061   61 EAALAEAAEADRRRAAGDRLPLLGVPIAVKDDVDVAGVPTAFGTAGEVPPA-TADSEVVRRLRAAGAVIVGKTNTCELGQ 139

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 217 SYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLH---ESEMHPG 293
Cdd:PRK06061  140 WPFTSGPAFGHTRNPWSRDHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRIStwpLPEAFNG 219

                         170       180       190
                  ....*....|....*....|....*....|
gi 1061385149 294 LPGRGRLgyscgffTRNVEDQEYLLRLVIG 323
Cdd:PRK06061  220 LTVNGPL-------ARTVADAALLLDAASG 242
PRK08137 PRK08137
amidase; Provisional
 90-281 3.01e-24

amidase; Provisional


Pssm-ID: 236161 [Multi-domain]  Cd Length: 497  Bit Score: 106.78  E-value: 3.01e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  90 QTVLAMDFPTLREALQSEKFNAYTVLSAYVWRAIKINR---KINCITEVIKEAFTDAARLDDEYRE-QPKPPLFGIPFSV 165
Cdd:PRK08137    1 QTALEERAGALQAAMPAGAAPASQLTRAYLQRIARIDRdgpRLNAVIELNPDAEADAAALDAERKAgKVRGPLHGIPVLL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 166 KSNFYVT-GYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQglLSYITSN-------PVYGTTKNPWDFSRT 237
Cdd:PRK08137   81 KDNIDAAdPMPTTAGSLALAGNRPTRDAFLVARLRDAGAVILGKANLSE--WANFRSTrsssgwsARGGLTRNPYALDRS 158

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1061385149 238 PGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPT 281
Cdd:PRK08137  159 PCGSSSGSGAAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPT 202
PRK07042 PRK07042
amidase; Provisional
 151-373 3.92e-24

amidase; Provisional


Pssm-ID: 235915 [Multi-domain]  Cd Length: 464  Bit Score: 105.83  E-value: 3.92e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 151 REQPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQ-GLLSYITSNpVYGTTK 229
Cdd:PRK07042   65 KGEPLGPLDGVPVTIKENIATRGVPVPLGTAATDLPPAAADAPPAARLREAGAVILAKTTMPDyGMLSSGLSS-FHGLTR 143

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 230 NPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLhesEMHPGLPGRgrlgysC-GFFT 308
Cdd:PRK07042  144 NPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRI---PIDPPYTGR------CaGPMT 214

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1061385149 309 RNVEDQEYLLRlVIGKPEYQQ-MS-PYSSLSPL-LDTSSDDKRkpvIGWFVDDGF-CSVSPSNQRAVEE 373
Cdd:PRK07042  215 RTVDDAALLMS-VLSRPDARDgTSlPPQDIDWSdLDIDVRGLR---IGLMLDAGCgLAVDPEVRAAVEA 279
PRK07056 PRK07056
amidase; Provisional
 133-284 7.28e-24

amidase; Provisional


Pssm-ID: 235921 [Multi-domain]  Cd Length: 454  Bit Score: 105.02  E-value: 7.28e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 133 TEVIKEAFTDAARLDDEYREQPKP--PLFGIPFSVKSNFYVTGYEATVGLASLLEQ-RETTTCSLVKFLKNQGAIPFCLT 209
Cdd:PRK07056   45 THVDADAARAAADAADALRAAGAApsPLAGIPVSVKDLFDVAGQVTRAGSRVLADApPAAADAPAVARLRRAGAVLIGRT 124

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1061385149 210 NLPQGLLSYITSNPVYGTTKNPWDFS----RTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDR 284
Cdd:PRK07056  125 NMTEFAFSGLGLNPHYGTPRNPWRRDvgdgRIPGGSSSGAAVSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARR 203
PRK08186 PRK08186
allophanate hydrolase; Provisional
 138-388 1.53e-22

allophanate hydrolase; Provisional


Pssm-ID: 236177 [Multi-domain]  Cd Length: 600  Bit Score: 102.23  E-value: 1.53e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 138 EAFTDAARLDDEYREQPkpPLFGIPFSVKSNFYVTGYEATVG---LASLLEQrettTCSLVKFLKNQGAIPFCLTNLPQ- 213
Cdd:PRK08186   51 DLLAQAAALEARDPAAL--PLYGVPFAVKDNIDVAGLPTTAAcpaFAYTPER----DATVVARLRAAGAIVIGKTNLDQf 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 214 --GLLSyiTSNPvYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRlhesemh 291
Cdd:PRK08186  125 atGLVG--TRSP-YGAVRNAFDPEYVSGGSSSGSAVAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGL------- 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 292 pgLPGRG-----RLgYSC-GFFTRNVEDQEYLLRLVIGkpeYQQMSPYSSLSPlLDTSSDDKRKPVIG--------WFVD 357
Cdd:PRK08186  195 --LSTRGvvpacRT-LDCvSVFALTVDDADAVLAVMAG---FDPADPYSRANP-ADAPAALPAGPRVGvpraaqleFFGD 267

                         250       260       270
                  ....*....|....*....|....*....|.
gi 1061385149 358 dgfcsvsPSNQRAVEETIGKLKELGYEVKEF 388
Cdd:PRK08186  268 -------AEAEAAFAAALARLEALGAELVEI 291
PRK06102 PRK06102
amidase;
137-313 2.18e-19

amidase;


Pssm-ID: 235698 [Multi-domain]  Cd Length: 452  Bit Score: 91.25  E-value: 2.18e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 137 KEAFTDAARLddeyRE-QPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQ-RETTTCSLVKFLKNQGAIPFCLTNLPQG 214
Cdd:PRK06102   52 REAEASSARW----RAgRSLGLLDGIPIAWKDLFDVAGSVTTAGSVVLANAaPASRDAAVVALLARAGMVSIGRTNMSEF 127

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 215 LLSYITSNPVYGTTKNPW--DFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLhesEMHP 292
Cdd:PRK06102  128 AFSGLGLNPHYGTPVNPRstDVPRIPGGSSSGSAVAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRY---SMDG 204

                         170       180
                  ....*....|....*....|.
gi 1061385149 293 GLPGRGRLGySCGFFTRNVED 313
Cdd:PRK06102  205 VFPLAKSLD-SLGPLCRSVRD 224
PRK07235 PRK07235
amidase; Provisional
 220-403 1.89e-18

amidase; Provisional


Pssm-ID: 235979 [Multi-domain]  Cd Length: 502  Bit Score: 88.91  E-value: 1.89e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 220 TSNPvyGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQdrlhesemhpglpgrGR 299
Cdd:PRK07235  152 TSDP--GPVHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTH---------------GL 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 300 LGYSCGF-----------FTRNVEDQEYLLRLVIGKPEY---QQMSP----YSSlspLLDTSSDDKRkpvIGwFVDDGFc 361
Cdd:PRK07235  215 VPYTGAFpiertidhlgpMTATVRDNALLLEVIAGRDGLdprQPAQPpvddYTA---ALDRGVKGLK---IG-ILREGF- 286

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1061385149 362 SVSPSNQR---AVEETIGKLKELGYEVKEFKVNDidtkfHSHAVA 403
Cdd:PRK07235  287 GLPNSEPEvdeAVRAAAKRLEDLGATVEEVSIPL-----HRLALA 326
PRK05962 PRK05962
amidase; Validated
 139-285 8.54e-16

amidase; Validated


Pssm-ID: 168315 [Multi-domain]  Cd Length: 424  Bit Score: 79.82  E-value: 8.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 139 AFTDAArldDEYREQPKP--PLFGIPFSVKSNFYVTGYEATVGlaSLLEQRE---TTTCSLVKFLKNQGAIPFCLTNLPQ 213
Cdd:PRK05962   28 AEADAA---DARRRAGRSlgPLDGRIVSIKDLFDVAGEPTLAG--SVIRRDAppaGADALIVQRLRNAGAVIIGKTHMTE 102

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1061385149 214 GLLSYITSNPVYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRL 285
Cdd:PRK05962  103 FAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPTARRI 174
PLN02722 PLN02722
indole-3-acetamide amidohydrolase
 156-332 2.94e-15

indole-3-acetamide amidohydrolase


Pssm-ID: 166363  Cd Length: 422  Bit Score: 78.39  E-value: 2.94e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 156 PPLFGIPFSVKSNFYVTGYEATVGLASLLE--QRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTTKNPWD 233
Cdd:PLN02722   25 LPLHGLTFAVKDIFDVEGYVTGFGNPDWARthSAATSTAPAVLAVLRGGATCVGKTIMDEMAYSINGENAHYGTPTNPIA 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 234 FSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLHESemhpGLPGRGRLGYSCGFFTRNVED 313
Cdd:PLN02722  105 PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTV----GVIPMAQSFDTVGWFARDPVI 180

                         170
                  ....*....|....*....
gi 1061385149 314 QEYLLRLVIGKPEYQQMSP 332
Cdd:PLN02722  181 LKRVGHVLLQQPDVNPIKP 199
PRK08310 PRK08310
amidase; Provisional
 153-312 4.96e-15

amidase; Provisional


Pssm-ID: 181375 [Multi-domain]  Cd Length: 395  Bit Score: 77.33  E-value: 4.96e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 153 QPKPPLFGIPFSVKSNFYVTGYEATVG----LAslLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLLSYITSNPVYGTT 228
Cdd:PRK08310   21 AASGPLAGLRFAVKDVFDVAGYVTGCGnpdwLA--ESPVATRTAPAVEKLLAAGARFVGKTQTDELAFSLNGQNAHYGTP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 229 KNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLhesemhpGLPGRGRLGYS---CG 305
Cdd:PRK08310   99 VNPAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRI-------SLEGVMPLAPSfdtVG 171


                  ....*..
gi 1061385149 306 FFTRNVE 312
Cdd:PRK08310  172 WFARDIA 178
PRK06707 PRK06707
amidase; Provisional
 100-348 1.16e-13

amidase; Provisional


Pssm-ID: 235855 [Multi-domain]  Cd Length: 536  Bit Score: 73.79  E-value: 1.16e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 100 LREALQSEKFNAYTVLSAYVWRAIKINRK---INCITEVIKEAFTDAARLDDEYREQPKPPLFGIPFSVKSNFYVTGYEA 176
Cdd:PRK06707   76 LQKMIDDGKLSYEELTSIYLFRIQEHDQNgitLNSVTEINPNAMEEARKLDQERSRNKKSNLYGIPVVVKDNVQTAKVMP 155

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 177 T-VGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQ--GLLSYiTSNPVY----GTTKNPWD-FSRTPGGSSGGEAAL 248
Cdd:PRK06707  156 TsAGTYVLKDWIADQDATIVKQLKEEGAFVLGKANMSEwaNYLSF-TMPSGYsgkkGQNLNPYGpIKFDTSGSSSGSATV 234

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 249 LAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLHESEMHPGLPGRGrlgySCGFFTRNVEDQEYLlrlvigkpeYQ 328
Cdd:PRK06707  235 VAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLD----TAGPMARTVKDAATL---------FN 301

                         250       260
                  ....*....|....*....|
gi 1061385149 329 QMSPYSSLSPLLDTSSDDKR 348
Cdd:PRK06707  302 AMIGYDEKDVMTEKVKDKER 321
PRK07139 PRK07139
amidase; Provisional
 126-391 1.38e-13

amidase; Provisional


Pssm-ID: 235945 [Multi-domain]  Cd Length: 439  Bit Score: 73.16  E-value: 1.38e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 126 NRKINCITEVIKEAFTdaarlddeyreqPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTTCSLVKFLKNQGAIP 205
Cdd:PRK07139   17 NDKNNAVSYVFDEKNN------------KDGPLANCVFTIKDNFATSEGPTHASSKSLENFKPSYNATVVQKLINAGAKP 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 206 FCLTNLPQ------GLLSyitsnpVYGTTKNPWDFSRTPGGSSGGEAALLAAGgTVFGIGNDLVGSLRIPAAFCGLVSLK 279
Cdd:PRK07139   85 VAKVHCDElglggtGLFS------AFGLIKNPLDSSKLVGGSSSGSAATFNKN-ISFAIGSDTGDSVRLPASFIGKVGFK 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 280 PTQdrlhesemhpGLPGR-GRLGYS-----CGFFTRNVEDQEYLLRLVIGKPEYQqmspYSSLSplLDTSSDDKRKP-VI 352
Cdd:PRK07139  158 PSY----------GAISRyGLFAYAssldtVAYFTHNVNDAIILSKVLFGKDEND----LTSVD--VKINNVKKTKPkKV 221

                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 1061385149 353 GWFvdDGFCSVSPSNQRAVEETIGKLKELGYEVKEFKVN 391
Cdd:PRK07139  222 AYL--DCFKELEEYVAKKYKKLINILKSENIEVEKIKID 258
PRK11910 PRK11910
amidase; Provisional
 66-313 3.17e-11

amidase; Provisional


Pssm-ID: 183377 [Multi-domain]  Cd Length: 615  Bit Score: 66.21  E-value: 3.17e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  66 PSKLLHSER----INGSKENAD--EIEKTFQTVLAMDFPTLREALQSEKFNAYTVLSAYVWRAIKINRK---INCITEVI 136
Cdd:PRK11910  130 PSPFYDKARvmtpINNQLATLDlaVLEAKEPLIIGADVTKLQQLIATKQLSYKELAGIYLNRIKKYDQNglnLNAITEIN 209

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 137 KEAFTDAARLDDEyREQPKPPLFGIPFSVKSNFYVTGYEATVGLASLLEQRETTTCSLVKFLKNQGAIPFCLTNLPQGLL 216
Cdd:PRK11910  210 PTIIAEAEQLDKE-NTTNKSALYGMPVLLKDNIGTKELPTSAGTVALKDWVIGKDATIVENLKANGALILGKTNMSEWAA 288

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 217 SYITSNP-----VYGTTKNPWDFSRTPGGSSGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQDRLHESEMh 291
Cdd:PRK11910  289 GMDEDLPngysgKKGQSKNPYSSNLDPSGSSSGSATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGI- 367

                         250       260
                  ....*....|....*....|..
gi 1061385149 292 pgLPGRGRLGySCGFFTRNVED 313
Cdd:PRK11910  368 --IPLSSRFD-TPGPLTRTVND 386
PRK06565 PRK06565
amidase; Validated
 99-282 2.97e-10

amidase; Validated


Pssm-ID: 180626  Cd Length: 566  Bit Score: 63.25  E-value: 2.97e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149  99 TLREALQSEKFNAYTVLSAYVWRAIKINR-----KINCITEVIKEAFTDAARLDDEY-REQPKPPLFGIPFSVKSNFYVT 172
Cdd:PRK06565   11 ELRAALESGRTTAVELVKAYLARIDAYDGpatgtALNAVVVRNPDALKEAEASDARRaRGETLGPLDGIPYTAKDSYLVK 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1061385149 173 GYEATVG---LASLLEQRETTTcslVKFLKNQGAIPFCLTNLPQ----GLlsyitSNPVYGTTKNPW--DFSRTP--GGS 241
Cdd:PRK06565   91 GLTAASGspaFKDLVAQRDAFT---IERLRAAGAICLGKTNMPPmangGM-----QRGVYGRAESPYnaAYLTAPfaSGS 162

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1061385149 242 SGGEAALLAAGGTVFGIGNDLVGSLRIPAAFCGLVSLKPTQ 282
Cdd:PRK06565  163 SNGAGTATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSR 203
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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