|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
354-752 |
9.91e-87 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
:
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 278.89 E-value: 9.91e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 354 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVppdkdllaleqsktfykpdwfDIVESEVKCCKEAVCVIDMSSFTKFE 433
Cdd:COG0404 1 FRPLRRTPLHDRHVALGAKFVDFGGWEMPVQYP---------------------GGVIAEHLAVREAVGLFDVSHMGKIE 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 434 ITstGDQALEVLQYLFSNDLDV-PVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNL 512
Cdd:COG0404 60 VT--GPDAAAFLDRLVTNDVSKlKPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPDFDV 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 513 LLEDVTWKYTALNLIGPRAVDVLSELsyAPMTPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEYALHVYNE 592
Cdd:COG0404 138 TITDVTDDWALLAVQGPKAREVLAKL--TDADLSALPFMSFREGTVAGVP-VRVSRTGYTGEDGFEIYVPAEDAEALWDA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 593 VMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGmDFIGRDALLQQKQNGVYKRLTMFIL 672
Cdd:COG0404 215 LLEAGEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 673 DDHDSdldlwPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEeqvvtadfinrgEYEIDIAGYRFQAK 752
Cdd:COG0404 294 DGRGV-----PRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGT------------ELEVEIRGKRVPAE 356
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
1-319 |
1.50e-54 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
:
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 192.43 E-value: 1.50e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHV 80
Cdd:COG0665 63 LAREALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYD 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGlsNEEPVSIPL 160
Cdd:COG0665 143 PDDGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLL--PMLGLRLPL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 161 HACEHFYLLTRPLETPLqssTPTIVDaDGRIYIRNWQGG--ILSGGFEKNPkpiftegknqleiQNLQEDWDHFEPLLSS 238
Cdd:COG0665 221 RPVRGYVLVTEPLPDLP---LRPVLD-DTGVYLRPTADGrlLVGGTAEPAG-------------FDRAPTPERLEALLRR 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 239 LLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLK 318
Cdd:COG0665 284 LRRLFPALADAEIVRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPD 363
|
.
gi 1015576793 319 R 319
Cdd:COG0665 364 R 364
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
305-360 |
7.60e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
:
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.10 E-value: 7.60e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1015576793 305 HGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTS 360
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPHQNNREYLRERVAENYGEVYDIHHPNEEREAGRPLRTS 56
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
354-752 |
9.91e-87 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 278.89 E-value: 9.91e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 354 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVppdkdllaleqsktfykpdwfDIVESEVKCCKEAVCVIDMSSFTKFE 433
Cdd:COG0404 1 FRPLRRTPLHDRHVALGAKFVDFGGWEMPVQYP---------------------GGVIAEHLAVREAVGLFDVSHMGKIE 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 434 ITstGDQALEVLQYLFSNDLDV-PVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNL 512
Cdd:COG0404 60 VT--GPDAAAFLDRLVTNDVSKlKPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPDFDV 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 513 LLEDVTWKYTALNLIGPRAVDVLSELsyAPMTPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEYALHVYNE 592
Cdd:COG0404 138 TITDVTDDWALLAVQGPKAREVLAKL--TDADLSALPFMSFREGTVAGVP-VRVSRTGYTGEDGFEIYVPAEDAEALWDA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 593 VMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGmDFIGRDALLQQKQNGVYKRLTMFIL 672
Cdd:COG0404 215 LLEAGEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 673 DDHDSdldlwPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEeqvvtadfinrgEYEIDIAGYRFQAK 752
Cdd:COG0404 294 DGRGV-----PRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGT------------ELEVEIRGKRVPAE 356
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
363-636 |
6.44e-85 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 269.84 E-value: 6.44e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 363 YDRLDAQGARWMEKHGFERPKYFVPPDKDllaleqsktfykpdwfdiveSEVKCCKEAVCVIDMSSFTKFEITstGDQAL 442
Cdd:pfam01571 1 YDRHVALGAKFVEFAGWEMPVQYGSNGIL--------------------AEHRAVREAAGLFDVSHMGKIEVS--GPDAA 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 443 EVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDsNLLLEDVTWKY 521
Cdd:pfam01571 59 AFLQRLTTNDVSkLKPGRATYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL-DVVVVDVTDDY 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 522 TALNLIGPRAVDVLSELSYAPMTPDhFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYG 601
Cdd:pfam01571 138 ALLALQGPKAREVLEKLTDGDLLEA-LPFFSFREIEIGGVP-VRVSRTGYTGEDGFEIYVPAEDAVELWEALLEAGAELG 215
|
250 260 270
....*....|....*....|....*....|....*
gi 1015576793 602 IRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECG 636
Cdd:pfam01571 216 LRPAGLGARDSLRLEAGLPLYGHDLDEETTPLEAG 250
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
1-319 |
1.50e-54 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 192.43 E-value: 1.50e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHV 80
Cdd:COG0665 63 LAREALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYD 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGlsNEEPVSIPL 160
Cdd:COG0665 143 PDDGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLL--PMLGLRLPL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 161 HACEHFYLLTRPLETPLqssTPTIVDaDGRIYIRNWQGG--ILSGGFEKNPkpiftegknqleiQNLQEDWDHFEPLLSS 238
Cdd:COG0665 221 RPVRGYVLVTEPLPDLP---LRPVLD-DTGVYLRPTADGrlLVGGTAEPAG-------------FDRAPTPERLEALLRR 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 239 LLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLK 318
Cdd:COG0665 284 LRRLFPALADAEIVRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPD 363
|
.
gi 1015576793 319 R 319
Cdd:COG0665 364 R 364
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
1-302 |
1.65e-38 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 146.39 E-value: 1.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRlISLKRINAGLNVIGIPSEIISPKKVAELHHLLNvhDLVGAMHV 80
Cdd:pfam01266 61 LALEALDLWEELEEELGIDCGFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLP--GLRGGLFY 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVmVKKGQVTGVETDkGQIECqyFVNCAGQWAYELGLSneePVSIPL 160
Cdd:pfam01266 138 PDGGHVDPARLLRALARAAEALGVRIIEGTEVTGI-EEEGGVWGVVTT-GEADA--VVNAAGAWADLLALP---GLRLPV 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 161 HACEHFYLLTRPL-ETPLQSSTPTIVDADGRIYIRN-WQGGILSGGFEknpkpiFTEGKNQLEIqnlqeDWDHFEPLLSS 238
Cdd:pfam01266 211 RPVRGQVLVLEPLpEALLILPVPITVDPGRGVYLRPrADGRLLLGGTD------EEDGFDDPTP-----DPEEIEELLEA 279
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1015576793 239 LLRRMPELETLEimklvncpETF-----TPDMRCIMGEsPAVQGYFVLAGMNSAGLSFGGGAGKYLAEW 302
Cdd:pfam01266 280 ARRLFPALADIE--------RAWaglrpLPDGLPIIGR-PGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
357-738 |
4.37e-38 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 145.64 E-value: 4.37e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 357 LRTSPLYDRLDAQGARWMEKHGFERP-KYfvppdkdllaleQSktfykpdwfdIVEsEVKCCKEAVCVIDMSSFTKFEIT 435
Cdd:PRK00389 2 LKRTPLYDLHVALGAKMVDFGGWEMPvQY------------GS----------IIE-EHHAVRTDAGLFDVSHMGEVDVT 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 436 stGDQALEVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMI--SPTDQQVhcWAWLKKHMpKDSNL 512
Cdd:PRK00389 59 --GPDALAFLQYLLANDVSkLKPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVvnAANREKD--LAWIKSHA-AGFGV 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 513 LLEDVTWKYTALNLIGPRAVDVLSELSYAPMtpDHFPSLFCKEMSVGYANGIRVmSMT-HTGEPGFMLYIPIEYALHVYN 591
Cdd:PRK00389 134 EVTDRSDDLAMIAVQGPKAREKLQKLTDADL--SELKPFFGAQGAEVGGGDVLV-ARTgYTGEDGFEIYLPAEDAEALWD 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 592 EVMSVGqkygIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGMDFIGRDALLQQKQNGVYKRLTMF- 670
Cdd:PRK00389 211 ALLEAG----VKPCGLGARDTLRLEAGMPLYGQDMDETITPLEAGLGWTVKLEEKRDFIGREALEAQKEAGVERKLVGLe 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 671 -----IlddhdsdldlwPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVhnfSEDTGEE------------QVVTAD 733
Cdd:PRK00389 287 leergI-----------PRHGYPVLADGEEIGEVTSGTFSPTLGKSIALAYV---PAGVGDEveveirgkqvpaKVVKPP 352
|
....*
gi 1015576793 734 FINRG 738
Cdd:PRK00389 353 FVRRG 357
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
305-360 |
7.60e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.10 E-value: 7.60e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1015576793 305 HGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTS 360
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPHQNNREYLRERVAENYGEVYDIHHPNEEREAGRPLRTS 56
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
1-320 |
6.95e-06 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 49.06 E-value: 6.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTgYTRTGSIFLAQTQDRliSLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHV 80
Cdd:TIGR01377 60 MMLECYQLWAQLEKEAGTKL-HRQTGLLLLGPKENQ--FLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLD 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYEL--GLSNEEPVSi 158
Cdd:TIGR01377 137 PNGGVLYAEKALRALQELAEAHGATVRDGTKVVEIEPTELLVT-VKTTKGSYQANKLVVTAGAWTSKLlsPLGIEIPLQ- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 159 PLHACEHFYLLTRPLETPLQSSTPTIV--DADGRIYirnwqgGILSGGFEKNPKPIFTEGKN----------QLEIQNLQ 226
Cdd:TIGR01377 215 PLRINVCYWREKEPGSYGVSQAFPCFLvlGLNPHIY------GLPSFEYPGLMKVYYHHGQQidpderdcpfGADIEDVQ 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 227 EdwdhfeplLSSLLR-RMPEL-ETLEIMKLvnCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMV 304
Cdd:TIGR01377 289 I--------LRKFVRdHLPGLnGEPKKGEV--CMYTNTPDEHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAM 358
|
330
....*....|....*.
gi 1015576793 305 HGYPSENVWELDLKRF 320
Cdd:TIGR01377 359 KLKPSYDLAIFSLNRF 374
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
8-322 |
1.19e-03 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 42.13 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 8 LYYQLEQETGiQTGYTRTGSIFLAQTQDRLISlkrinaglNVI------GIPSEIISPKKVAELHHLLNVHDlvGAMHV- 80
Cdd:PRK11259 71 LWRELERESG-EPLFVRTGVLNLGPADSDFLA--------NSIrsarqhGLPHEVLDAAEIRRRFPQFRLPD--GYIALf 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 --------PEDAVVSSADVALalasaasQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYELgLSn 152
Cdd:PRK11259 140 epdggflrPELAIKAHLRLAR-------EAGAELLFNEPVTAIEADGDGVT-VTTADGTYEAKKLVVSAGAWVKDL-LP- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 153 eePVSIPLHACEH-FYLLTRPLETPLQSSTPtivdadgrIYIRNWQGGILSGGFEKNPKPIFTEGKNQ--LEIQNLQE-- 227
Cdd:PRK11259 210 --PLELPLTPVRQvLAWFQADGRYSEPNRFP--------AFIWEVPDGDQYYGFPAENGPGLKIGKHNggQEITSPDErd 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 228 ---DWDHFEPLLSSLLRR-MPELETLeiMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWM 303
Cdd:PRK11259 280 rfvTVAEDGAELRPFLRNyLPGVGPC--LRGAACTYTNTPDEHFIIDTLPGHPNVLVASGCSGHGFKFASVLGEILADLA 357
|
330
....*....|....*....
gi 1015576793 304 VHGYPSENVWELDLKRFGA 322
Cdd:PRK11259 358 QDGTSDFDLSPFSLSRFAA 376
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| GcvT |
COG0404 |
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and ... |
354-752 |
9.91e-87 |
|
Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Glycine cleavage system protein T (aminomethyltransferase) is part of the Pathway/BioSystem: Glycine cleavage
Pssm-ID: 440173 [Multi-domain] Cd Length: 372 Bit Score: 278.89 E-value: 9.91e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 354 GRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVppdkdllaleqsktfykpdwfDIVESEVKCCKEAVCVIDMSSFTKFE 433
Cdd:COG0404 1 FRPLRRTPLHDRHVALGAKFVDFGGWEMPVQYP---------------------GGVIAEHLAVREAVGLFDVSHMGKIE 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 434 ITstGDQALEVLQYLFSNDLDV-PVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNL 512
Cdd:COG0404 60 VT--GPDAAAFLDRLVTNDVSKlKPGRARYTLMLNEDGGIIDDLTVYRLGEDRFLLVVNAANAAKDLAWLEEHLPPDFDV 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 513 LLEDVTWKYTALNLIGPRAVDVLSELsyAPMTPDHFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEYALHVYNE 592
Cdd:COG0404 138 TITDVTDDWALLAVQGPKAREVLAKL--TDADLSALPFMSFREGTVAGVP-VRVSRTGYTGEDGFEIYVPAEDAEALWDA 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 593 VMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGmDFIGRDALLQQKQNGVYKRLTMFIL 672
Cdd:COG0404 215 LLEAGEEFGVKPCGLGARDTLRLEAGYPLYGHELDETTTPLEAGLGWAVKLDKG-DFIGKEALLRQKEEGPRRKLVGLEL 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 673 DDHDSdldlwPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEeqvvtadfinrgEYEIDIAGYRFQAK 752
Cdd:COG0404 294 DGRGV-----PRAGAPVLADGEVVGEVTSGTFSPTLGKSIALAYVPAGLARPGT------------ELEVEIRGKRVPAE 356
|
|
| GCV_T |
pfam01571 |
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, ... |
363-636 |
6.44e-85 |
|
Aminomethyltransferase folate-binding domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 460255 Cd Length: 254 Bit Score: 269.84 E-value: 6.44e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 363 YDRLDAQGARWMEKHGFERPKYFVPPDKDllaleqsktfykpdwfdiveSEVKCCKEAVCVIDMSSFTKFEITstGDQAL 442
Cdd:pfam01571 1 YDRHVALGAKFVEFAGWEMPVQYGSNGIL--------------------AEHRAVREAAGLFDVSHMGKIEVS--GPDAA 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 443 EVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDsNLLLEDVTWKY 521
Cdd:pfam01571 59 AFLQRLTTNDVSkLKPGRATYTLMLNERGGVIDDLTVYRLGDDHFLLVVNAANREKDLAWLRKHAEKL-DVVVVDVTDDY 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 522 TALNLIGPRAVDVLSELSYAPMTPDhFPSLFCKEMSVGYANgIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYG 601
Cdd:pfam01571 138 ALLALQGPKAREVLEKLTDGDLLEA-LPFFSFREIEIGGVP-VRVSRTGYTGEDGFEIYVPAEDAVELWEALLEAGAELG 215
|
250 260 270
....*....|....*....|....*....|....*
gi 1015576793 602 IRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECG 636
Cdd:pfam01571 216 LRPAGLGARDSLRLEAGLPLYGHDLDEETTPLEAG 250
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
1-319 |
1.50e-54 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 192.43 E-value: 1.50e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHV 80
Cdd:COG0665 63 LAREALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAELREREPGLGSPDYAGGLYD 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYELGlsNEEPVSIPL 160
Cdd:COG0665 143 PDDGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWSARLL--PMLGLRLPL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 161 HACEHFYLLTRPLETPLqssTPTIVDaDGRIYIRNWQGG--ILSGGFEKNPkpiftegknqleiQNLQEDWDHFEPLLSS 238
Cdd:COG0665 221 RPVRGYVLVTEPLPDLP---LRPVLD-DTGVYLRPTADGrlLVGGTAEPAG-------------FDRAPTPERLEALLRR 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 239 LLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSENVWELDLK 318
Cdd:COG0665 284 LRRLFPALADAEIVRAWAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPFSPD 363
|
.
gi 1015576793 319 R 319
Cdd:COG0665 364 R 364
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
1-302 |
1.65e-38 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 146.39 E-value: 1.65e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRlISLKRINAGLNVIGIPSEIISPKKVAELHHLLNvhDLVGAMHV 80
Cdd:pfam01266 61 LALEALDLWEELEEELGIDCGFRRCGVLVLARDEEE-EALEKLLAALRRLGVPAELLDAEELRELEPLLP--GLRGGLFY 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVmVKKGQVTGVETDkGQIECqyFVNCAGQWAYELGLSneePVSIPL 160
Cdd:pfam01266 138 PDGGHVDPARLLRALARAAEALGVRIIEGTEVTGI-EEEGGVWGVVTT-GEADA--VVNAAGAWADLLALP---GLRLPV 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 161 HACEHFYLLTRPL-ETPLQSSTPTIVDADGRIYIRN-WQGGILSGGFEknpkpiFTEGKNQLEIqnlqeDWDHFEPLLSS 238
Cdd:pfam01266 211 RPVRGQVLVLEPLpEALLILPVPITVDPGRGVYLRPrADGRLLLGGTD------EEDGFDDPTP-----DPEEIEELLEA 279
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1015576793 239 LLRRMPELETLEimklvncpETF-----TPDMRCIMGEsPAVQGYFVLAGMNSAGLSFGGGAGKYLAEW 302
Cdd:pfam01266 280 ARRLFPALADIE--------RAWaglrpLPDGLPIIGR-PGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
|
|
| gcvT |
PRK00389 |
glycine cleavage system aminomethyltransferase GcvT; |
357-738 |
4.37e-38 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 234742 [Multi-domain] Cd Length: 359 Bit Score: 145.64 E-value: 4.37e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 357 LRTSPLYDRLDAQGARWMEKHGFERP-KYfvppdkdllaleQSktfykpdwfdIVEsEVKCCKEAVCVIDMSSFTKFEIT 435
Cdd:PRK00389 2 LKRTPLYDLHVALGAKMVDFGGWEMPvQY------------GS----------IIE-EHHAVRTDAGLFDVSHMGEVDVT 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 436 stGDQALEVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMI--SPTDQQVhcWAWLKKHMpKDSNL 512
Cdd:PRK00389 59 --GPDALAFLQYLLANDVSkLKPGKAQYTCMLNEDGGVIDDLIVYKLSEDEYLLVvnAANREKD--LAWIKSHA-AGFGV 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 513 LLEDVTWKYTALNLIGPRAVDVLSELSYAPMtpDHFPSLFCKEMSVGYANGIRVmSMT-HTGEPGFMLYIPIEYALHVYN 591
Cdd:PRK00389 134 EVTDRSDDLAMIAVQGPKAREKLQKLTDADL--SELKPFFGAQGAEVGGGDVLV-ARTgYTGEDGFEIYLPAEDAEALWD 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 592 EVMSVGqkygIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGMDFIGRDALLQQKQNGVYKRLTMF- 670
Cdd:PRK00389 211 ALLEAG----VKPCGLGARDTLRLEAGMPLYGQDMDETITPLEAGLGWTVKLEEKRDFIGREALEAQKEAGVERKLVGLe 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 671 -----IlddhdsdldlwPWWGEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVhnfSEDTGEE------------QVVTAD 733
Cdd:PRK00389 287 leergI-----------PRHGYPVLADGEEIGEVTSGTFSPTLGKSIALAYV---PAGVGDEveveirgkqvpaKVVKPP 352
|
....*
gi 1015576793 734 FINRG 738
Cdd:PRK00389 353 FVRRG 357
|
|
| FAO_M |
pfam16350 |
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent ... |
305-360 |
7.60e-16 |
|
FAD dependent oxidoreductase central domain; This domain occurs in several FAD dependent oxidoreductases: Sarcosine dehydrogenase, Dimethylglycine dehydrogenase and Dimethylglycine dehydrogenase. It is situated between the DAO domain (pfam01266) and the GCV_T domain (pfam01571).
Pssm-ID: 465100 Cd Length: 56 Bit Score: 72.10 E-value: 7.60e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1015576793 305 HGYPSENVWELDLKRFGALQSSRTFLRHRVMEVMPLMYDLKVPRWDFQTGRQLRTS 360
Cdd:pfam16350 1 DGEPPIDLWECDIRRFGPHQNNREYLRERVAENYGEVYDIHHPNEEREAGRPLRTS 56
|
|
| dmdA |
PRK12486 |
dimethylsulfoniopropionate demethylase; |
355-739 |
9.43e-15 |
|
dimethylsulfoniopropionate demethylase;
Pssm-ID: 237113 [Multi-domain] Cd Length: 368 Bit Score: 76.71 E-value: 9.43e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 355 RQLRTSPLYDRLDAQGARwmekhGFerpkyfvppdkdllaleqskTFYK----PDWFDIVESEVKCCKEAVCVIDMSSFT 430
Cdd:PRK12486 9 RRLRRTPFSDGVEAAGVK-----AY--------------------TVYNhmllPTVFESVEDDYAHLKEHVQVWDVAVER 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 431 KFEITstGDQALEVLQYLFSNDLD-VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFmISPTDQQVHCWAwlkKHMPKD 509
Cdd:PRK12486 64 QVEIR--GPDAARLVQMLTPRDLRgMKPGQCYYVPIVDETGGMLNDPVALKLAEDRWW-ISIADSDLLLWV---KGLANG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 510 SNLLLEDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFpslfckeMSVGYAN--GIRvMSMTHTG---EPGFMLYIP-I 583
Cdd:PRK12486 138 RKLDVLVVEPDVSPLAVQGPKADALMARVFGEAIRDLRF-------FRFGYFDfeGTD-LVIARSGyskQGGFEIYVEgS 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 584 EYALHVYNEVMSVGQKYGIRnAGYYALRSlRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGMDFIGRDALLQQKQNGV 663
Cdd:PRK12486 210 DLGMPLWDALFEAGKDLNVR-AGCPNLIE-RIEGGLLSYGNDMTRDNTPHECGLGRFCNTQTDIGCIGKDALLRVAKEGP 287
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1015576793 664 YKRLTMFILDDHDSDLDLWPWwgePIYRNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEE-QVVTADFINRGE 739
Cdd:PRK12486 288 QKQIRGIKIGGERIPPCDRAW---PLLAGDNRVGQVTSAAYSPDFQTNVAIGMVRMTHWDPGTGlEVETPDGMRPAT 361
|
|
| PLN02319 |
PLN02319 |
aminomethyltransferase |
463-717 |
4.36e-13 |
|
aminomethyltransferase
Pssm-ID: 177953 [Multi-domain] Cd Length: 404 Bit Score: 71.68 E-value: 4.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 463 TGML----NEGGGYENDCSIARLNKRSFFMI-----SPTDQqvhcwAWLKKHMpKDSNLLLEDVTW----KYTALNLIGP 529
Cdd:PLN02319 112 TGTLsvftNEKGGIIDDTVITKVTDDHIYLVvnagcRDKDL-----AHIEEHM-KAFKAKGGDVSWhvhdERSLLALQGP 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 530 RAVDVLSELSYAPMTPDHFpSLFcKEMSVgyaNGI--RVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKyGIRNAGY 607
Cdd:PLN02319 186 LAAPVLQHLTKEDLSKMYF-GDF-RITDI---NGAdcFLTRTGYTGEDGFEISVPSEHAVDLAKALLEKSEG-KVRLTGL 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 608 YALRSLRIEKFFAFWGQDINNLTTPLECGRE----SRVKlEKGmDFIGRDALLQQKQNGVYKRLTMFILDdhdsdldlwp 683
Cdd:PLN02319 260 GARDSLRLEAGLCLYGNDLEEHITPVEAGLAwtigKRRR-AEG-GFLGADVILKQLKEGVSRRRVGFISS---------- 327
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1015576793 684 wwGEP------IY-RNGQYVGKTTSSAYSYSLERHVCLGFV 717
Cdd:PLN02319 328 --GAParshseILdESGEKIGEVTSGGFSPCLKKNIAMGYV 366
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
6-145 |
5.19e-12 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 68.63 E-value: 5.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 6 NKLYYQLEQETGIQtgYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPS-EIISPKKVAELHHLLNvHDLVGAMHVPEDA 84
Cdd:COG0579 72 NELFYELCRELGIP--FKRCGKLVVATGEEEVAFLEKLYERGKANGVPGlEILDREELRELEPLLS-DEGVAALYSPSTG 148
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1015576793 85 VVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWA 145
Cdd:COG0579 149 IVDPGALTRALAENAEANGVELLLNTEVTGIEREGDGWE-VTTNGGTIRARFVINAAGLYA 208
|
|
| GCV_T_C |
pfam08669 |
Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage ... |
686-752 |
5.47e-11 |
|
Glycine cleavage T-protein C-terminal barrel domain; This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyzes the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Pssm-ID: 462554 [Multi-domain] Cd Length: 80 Bit Score: 59.03 E-value: 5.47e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1015576793 686 GEPIYRNGQYVGKTTSSAYSYSLERHVCLGFVHnfsedtgeeqvvtADFINRG-EYEIDIAGYRFQAK 752
Cdd:pfam08669 18 GEPVLRDGEVVGYVTSGAYSPTLGKSIALAYVD-------------AELAKPGtEVEVEIRGKRVPAT 72
|
|
| gcvT |
PRK13579 |
glycine cleavage system aminomethyltransferase GcvT; |
434-717 |
2.72e-09 |
|
glycine cleavage system aminomethyltransferase GcvT;
Pssm-ID: 237435 [Multi-domain] Cd Length: 370 Bit Score: 59.58 E-value: 2.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 434 ITSTGDQALEVLQYLFSND-LDVPVGHIVHTGMLNEGGGYENDCSIARLNKRsFFMISPTDQQVHCWAWLKKHMPKDSNL 512
Cdd:PRK13579 63 IEVSGKDAAAALERLVPVDiLALKEGRQRYTFFTNEQGGILDDLMVTNLGDH-LFLVVNAACKDADIAHLREHLSDECEV 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 513 -LLEDvtwkYTALNLIGPRAVDVLSELSyapmtPDHFPSLFckeMSVGyanGIRVMSMT-------HTGEPGFMLYIPIE 584
Cdd:PRK13579 142 nPLDD----RALLALQGPEAEAVLADLG-----PPVAALRF---MDGF---EPRLHGVDcfvsrsgYTGEDGFEISVPAD 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 585 YA------LHVYNEVMSVGqkYGIRNagyyalrSLRIEKFFAFWGQDINNLTTPLECGRE---SRVKLEKGmDFIGRDAL 655
Cdd:PRK13579 207 AAealaeaLLADPRVEPIG--LGARD-------SLRLEAGLCLYGHDIDTTTTPVEAALEwaiQKARREAG-GFPGAKAI 276
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1015576793 656 LQQKQNGV-YKRLTMFILDDHDSDLdlwpwwGEPIYRN-GQYVGKTTSSAYSYSLERHVCLGFV 717
Cdd:PRK13579 277 LAALAKGAsRRRVGLKPEGRAPVRE------GAPLFDDaGTEIGTVTSGGFGPSVGGPVAMGYV 334
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
1-320 |
6.95e-06 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 49.06 E-value: 6.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTgYTRTGSIFLAQTQDRliSLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHV 80
Cdd:TIGR01377 60 MMLECYQLWAQLEKEAGTKL-HRQTGLLLLGPKENQ--FLKTIQATLSRHGLEHELLSSKQLKQRFPNIRVPRNEVGLLD 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 PEDAVVSSADVALALASAASQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYEL--GLSNEEPVSi 158
Cdd:TIGR01377 137 PNGGVLYAEKALRALQELAEAHGATVRDGTKVVEIEPTELLVT-VKTTKGSYQANKLVVTAGAWTSKLlsPLGIEIPLQ- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 159 PLHACEHFYLLTRPLETPLQSSTPTIV--DADGRIYirnwqgGILSGGFEKNPKPIFTEGKN----------QLEIQNLQ 226
Cdd:TIGR01377 215 PLRINVCYWREKEPGSYGVSQAFPCFLvlGLNPHIY------GLPSFEYPGLMKVYYHHGQQidpderdcpfGADIEDVQ 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 227 EdwdhfeplLSSLLR-RMPEL-ETLEIMKLvnCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMV 304
Cdd:TIGR01377 289 I--------LRKFVRdHLPGLnGEPKKGEV--CMYTNTPDEHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAM 358
|
330
....*....|....*.
gi 1015576793 305 HGYPSENVWELDLKRF 320
Cdd:TIGR01377 359 KLKPSYDLAIFSLNRF 374
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
8-322 |
1.19e-03 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 42.13 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 8 LYYQLEQETGiQTGYTRTGSIFLAQTQDRLISlkrinaglNVI------GIPSEIISPKKVAELHHLLNVHDlvGAMHV- 80
Cdd:PRK11259 71 LWRELERESG-EPLFVRTGVLNLGPADSDFLA--------NSIrsarqhGLPHEVLDAAEIRRRFPQFRLPD--GYIALf 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 81 --------PEDAVVSSADVALalasaasQNGVQIYDRTSVLHVMVKKGQVTgVETDKGQIECQYFVNCAGQWAYELgLSn 152
Cdd:PRK11259 140 epdggflrPELAIKAHLRLAR-------EAGAELLFNEPVTAIEADGDGVT-VTTADGTYEAKKLVVSAGAWVKDL-LP- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 153 eePVSIPLHACEH-FYLLTRPLETPLQSSTPtivdadgrIYIRNWQGGILSGGFEKNPKPIFTEGKNQ--LEIQNLQE-- 227
Cdd:PRK11259 210 --PLELPLTPVRQvLAWFQADGRYSEPNRFP--------AFIWEVPDGDQYYGFPAENGPGLKIGKHNggQEITSPDErd 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 228 ---DWDHFEPLLSSLLRR-MPELETLeiMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWM 303
Cdd:PRK11259 280 rfvTVAEDGAELRPFLRNyLPGVGPC--LRGAACTYTNTPDEHFIIDTLPGHPNVLVASGCSGHGFKFASVLGEILADLA 357
|
330
....*....|....*....
gi 1015576793 304 VHGYPSENVWELDLKRFGA 322
Cdd:PRK11259 358 QDGTSDFDLSPFSLSRFAA 376
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
1-193 |
1.41e-03 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 41.71 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 1 MADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELH-HLLNV-HDLVGAM 78
Cdd:PRK00711 111 LAEYSRDCLKALRAETGIQYEGRQGGTLQLFRTQQQLDAAAKDIAVLEEAGVPYELLDRDELAAVEpALAGVrHKLVGGL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1015576793 79 HVPEDAV-------VSSADvalalasAASQNGVQIYDRTSVLHVMVKKGQVTGVETDKGQIECQYFVNCAGQWAYEL--G 149
Cdd:PRK00711 191 RLPNDETgdcqlftQRLAA-------MAEQLGVKFRFNTPVDGLLVEGGRITGVQTGGGVITADAYVVALGSYSTALlkP 263
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1015576793 150 LSNEEPVsIPLHAcehfYLLTRPLETPLQSSTPTIVDADGRIYI 193
Cdd:PRK00711 264 LGVDIPV-YPLKG----YSLTVPITDEDRAPVSTVLDETYKIAI 302
|
|
| |
