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Conserved domains on  [gi|685156926|ref|NP_001288703|]
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lipid droplet assembly factor 1 isoform 3 [Homo sapiens]

Protein Classification

lipid droplet assembly factor 1( domain architecture ID 583204)

lipid droplet assembly factor 1 (LDAF1) plays an important role in the formation of lipid droplets (LD) which are storage organelles at the center of lipid and energy homeostasis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Promethin super family cl24547
Promethin;
18-89 3.09e-09

Promethin;


The actual alignment was detected with superfamily member pfam16015:

Pssm-ID: 464974  Cd Length: 106  Bit Score: 49.49  E-value: 3.09e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 685156926   18 KKLSLLIDSFQNNSKVVAfmkspVGQYLDSHPFLAFTLLVFIVMSAVPVGFFLLIVVLTTLAALLGVIILEG 89
Cdd:pfam16015   1 RTLDRVLPPETRNRAYEA-----LGAFADERPLLAAFLLIQLALSLLPLLLFLGFALSTALFALVGALLFEG 67
 
Name Accession Description Interval E-value
Promethin pfam16015
Promethin;
18-89 3.09e-09

Promethin;


Pssm-ID: 464974  Cd Length: 106  Bit Score: 49.49  E-value: 3.09e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 685156926   18 KKLSLLIDSFQNNSKVVAfmkspVGQYLDSHPFLAFTLLVFIVMSAVPVGFFLLIVVLTTLAALLGVIILEG 89
Cdd:pfam16015   1 RTLDRVLPPETRNRAYEA-----LGAFADERPLLAAFLLIQLALSLLPLLLFLGFALSTALFALVGALLFEG 67
 
Name Accession Description Interval E-value
Promethin pfam16015
Promethin;
18-89 3.09e-09

Promethin;


Pssm-ID: 464974  Cd Length: 106  Bit Score: 49.49  E-value: 3.09e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 685156926   18 KKLSLLIDSFQNNSKVVAfmkspVGQYLDSHPFLAFTLLVFIVMSAVPVGFFLLIVVLTTLAALLGVIILEG 89
Cdd:pfam16015   1 RTLDRVLPPETRNRAYEA-----LGAFADERPLLAAFLLIQLALSLLPLLLFLGFALSTALFALVGALLFEG 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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