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Conserved domains on  [gi|631226387|ref|NP_001278817|]
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UPF0235 protein C15orf40 homolog [Danio rerio]

Protein Classification

DUF167 domain-containing protein( domain architecture ID 10495619)

DUF167 domain-containing protein similar to Homo sapiens UPF0235 protein C15orf40

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
73-144 2.05e-28

Uncharacterized ACR, YggU family COG1872;


:

Pssm-ID: 460608  Cd Length: 75  Bit Score: 100.18  E-value: 2.05e-28
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 631226387   73 TITIAIHAKPGAKQNAVT--DVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRV 144
Cdd:pfam02594   1 GVILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVSGETSRHKVVRI 74
 
Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
73-144 2.05e-28

Uncharacterized ACR, YggU family COG1872;


Pssm-ID: 460608  Cd Length: 75  Bit Score: 100.18  E-value: 2.05e-28
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 631226387   73 TITIAIHAKPGAKQNAVT--DVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRV 144
Cdd:pfam02594   1 GVILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVSGETSRHKVVRI 74
YggU COG1872
Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];
68-144 2.10e-24

Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];


Pssm-ID: 441476  Cd Length: 81  Bit Score: 90.15  E-value: 2.10e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 631226387  68 KLKDGTITIAIHAKPGAKQNAVTDVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRV 144
Cdd:COG1872    5 REDGDGLILAVRVQPGASRDAIVGVHGGALKVRVTAPPVDGKANAALIKLLAKALGVPKSRVEIVSGETSRNKRVRI 81
PRK05090 PRK05090
hypothetical protein; Validated
66-146 1.92e-14

hypothetical protein; Validated


Pssm-ID: 179931  Cd Length: 95  Bit Score: 64.95  E-value: 1.92e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387  66 VMKLKDGTItIAIHAKPGAKQNAVTDVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRVT 145
Cdd:PRK05090   4 VTWDGDGLV-LRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEKGELGRHKQVRII 82

                 .
gi 631226387 146 A 146
Cdd:PRK05090  83 N 83
TIGR00251 TIGR00251
TIGR00251 family protein; [Hypothetical proteins, Conserved]
67-144 1.05e-10

TIGR00251 family protein; [Hypothetical proteins, Conserved]


Pssm-ID: 129353  Cd Length: 87  Bit Score: 55.21  E-value: 1.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387   67 MKLKDGTITIAIHAKPGAKQNAVTDVSE--EAVGVAIAAPPTDGEANAELLRFLSKVLqlkKSEVSLDKGSKSREKVIRV 144
Cdd:TIGR00251   1 VRENDDGLLIRIYVQPKASKDSIVGYNEwrKRVEVKIKAPPVEGKANRELIKFFGEIF---GVDVEIVSGELSRQKTIKI 77
 
Name Accession Description Interval E-value
DUF167 pfam02594
Uncharacterized ACR, YggU family COG1872;
73-144 2.05e-28

Uncharacterized ACR, YggU family COG1872;


Pssm-ID: 460608  Cd Length: 75  Bit Score: 100.18  E-value: 2.05e-28
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 631226387   73 TITIAIHAKPGAKQNAVT--DVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRV 144
Cdd:pfam02594   1 GVILAVRVKPGAKRDAIGggAVGRGALKVRVAAPPVDGKANAALIEFLAKALGVPKSDVSIVSGETSRHKVVRI 74
YggU COG1872
Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];
68-144 2.10e-24

Uncharacterized conserved protein YggU, UPF0235/DUF167 family [Function unknown];


Pssm-ID: 441476  Cd Length: 81  Bit Score: 90.15  E-value: 2.10e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 631226387  68 KLKDGTITIAIHAKPGAKQNAVTDVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRV 144
Cdd:COG1872    5 REDGDGLILAVRVQPGASRDAIVGVHGGALKVRVTAPPVDGKANAALIKLLAKALGVPKSRVEIVSGETSRNKRVRI 81
PRK05090 PRK05090
hypothetical protein; Validated
66-146 1.92e-14

hypothetical protein; Validated


Pssm-ID: 179931  Cd Length: 95  Bit Score: 64.95  E-value: 1.92e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387  66 VMKLKDGTItIAIHAKPGAKQNAVTDVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRVT 145
Cdd:PRK05090   4 VTWDGDGLV-LRLYIQPKASRDQIVGLHGDELKVAITAPPVDGQANAHLLKFLAKQFRVAKSQVVIEKGELGRHKQVRII 82

                 .
gi 631226387 146 A 146
Cdd:PRK05090  83 N 83
PRK04021 PRK04021
hypothetical protein; Reviewed
70-158 1.70e-13

hypothetical protein; Reviewed


Pssm-ID: 167678  Cd Length: 92  Bit Score: 62.52  E-value: 1.70e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387  70 KDGTItIAIHAKPGAKQNAVTDVSE--EAVGVAIAAPPTDGEANAELLRFLSKVLqlkKSEVSLDKGSKSREKVIRVTAd 147
Cdd:PRK04021   6 KEGVI-LQVYVQPKAKENEIEGVDEwrGRLKVKIKAPPVKGKANKELVKFFSKLL---GAEVEIIRGETSREKDLLVKG- 80
                         90
                 ....*....|.
gi 631226387 148 VSQEEILKKLR 158
Cdd:PRK04021  81 ISLEEVKKKLK 91
TIGR00251 TIGR00251
TIGR00251 family protein; [Hypothetical proteins, Conserved]
67-144 1.05e-10

TIGR00251 family protein; [Hypothetical proteins, Conserved]


Pssm-ID: 129353  Cd Length: 87  Bit Score: 55.21  E-value: 1.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387   67 MKLKDGTITIAIHAKPGAKQNAVTDVSE--EAVGVAIAAPPTDGEANAELLRFLSKVLqlkKSEVSLDKGSKSREKVIRV 144
Cdd:TIGR00251   1 VRENDDGLLIRIYVQPKASKDSIVGYNEwrKRVEVKIKAPPVEGKANRELIKFFGEIF---GVDVEIVSGELSRQKTIKI 77
PRK01310 PRK01310
hypothetical protein; Validated
62-163 3.90e-08

hypothetical protein; Validated


Pssm-ID: 167208  Cd Length: 104  Bit Score: 48.50  E-value: 3.90e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387  62 PPGPVMKLKDGtITIAIHAKPGAKQNAVTDVSEEA-----VGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSK 136
Cdd:PRK01310   1 MSEPWRYSADG-LRLAVRLTPRGGRDAIDGIETLAdgravLKVRVRAVPEGGEANRALIELLAKALGVPKSSVRLLSGAT 79
                         90       100
                 ....*....|....*....|....*..
gi 631226387 137 SREKVIRVTADvsQEEILKKLRTEASA 163
Cdd:PRK01310  80 SRLKQLRIDGD--PEDLGEALRALTAA 104
PRK01530 PRK01530
hypothetical protein; Reviewed
73-144 3.21e-06

hypothetical protein; Reviewed


Pssm-ID: 134567  Cd Length: 105  Bit Score: 43.65  E-value: 3.21e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 631226387  73 TITIAIHAKPGAKQNAVTDV----SEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKVIRV 144
Cdd:PRK01530  13 QALLNLKVKPNAKQNLISNFviinNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILI 88
PRK00647 PRK00647
hypothetical protein; Validated
71-162 7.11e-06

hypothetical protein; Validated


Pssm-ID: 100624  Cd Length: 96  Bit Score: 42.55  E-value: 7.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 631226387  71 DGTITIAIHAKPGAKQNAVTDVSEEAVGVAIAAPPTDGEANAELLRFLSKVLQLKKSEVSLDKGSKSREKviRVTADVSQ 150
Cdd:PRK00647   3 EGFWILEVKVTPKARENKIVGFEGGILKVRVTEVPEKGKANDAVIALLAKFLSLPKRDVTLIAGETSRKK--KVLLPRSI 80
                         90
                 ....*....|..
gi 631226387 151 EEILKKLRTEAS 162
Cdd:PRK00647  81 KAILFEQFPSES 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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