|
Name |
Accession |
Description |
Interval |
E-value |
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
235-417 |
4.19e-16 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 78.51 E-value: 4.19e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 235 IENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMvtdtqdnlvkqaQRQLLLTYNDFAVHCYNHGAYQEGVLLLNKA 314
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALEL------------DPDDAEALYNLGLAYLRLGRYEEALADYEQA 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 315 IRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSP 394
Cdd:COG0457 69 LELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELG-------RYDEAIEAYERALELDP 141
|
170 180
....*....|....*....|...
gi 594542569 395 QKPQYYLHRAKCRQFLQNTLGAR 417
Cdd:COG0457 142 DDADALYNLGIALEKLGRYEEAL 164
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
295-430 |
6.99e-15 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 72.15 E-value: 6.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 295 AVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqq 374
Cdd:COG4783 11 AQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAG---- 86
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 594542569 375 khrQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLGARLDVATVLLLNPEY 430
Cdd:COG4783 87 ---DYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDPDD 139
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
15-215 |
8.25e-15 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 74.66 E-value: 8.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 15 PAKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAF 94
Cdd:COG0457 5 PDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 95 VLYLQGqclyelcDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNF- 173
Cdd:COG0457 85 ALQALG-------RYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKl 157
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 594542569 174 --FQKAKLCYQDLRSALLLDPLHAQAKGLLQKMVDQAKQSLQDA 215
Cdd:COG0457 158 grYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLL 201
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
21-270 |
1.01e-14 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 75.15 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 21 YYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQG 100
Cdd:COG2956 11 WYFKGLNYLLNGQPDKAIDLLEEALELDPETVEAHLALGNLYRRRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 101 qclyelcDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLC 180
Cdd:COG2956 91 -------LLDRAEELLEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 181 YQDLRSALLLDPLHAQAKGLLqkmvdqakqslqdASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDH 260
Cdd:COG2956 164 IEALEKALKLDPDCARALLLL-------------AELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEE 230
|
250
....*....|
gi 594542569 261 AVEDFLKAMD 270
Cdd:COG2956 231 ALELLRKALE 240
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
215-404 |
1.01e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 74.66 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 215 ASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMvtdtqdnlvkqaQRQLLLTYNDF 294
Cdd:COG0457 15 GLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALEL------------DPDDAEALNNL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 295 AVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGFCQQ 374
Cdd:COG0457 83 GLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEE 162
|
170 180 190
....*....|....*....|....*....|
gi 594542569 375 KHRQFQTAEEHFSEAIRHSPQKPQYYLHRA 404
Cdd:COG0457 163 ALELLEKLEAAALAALLAAALGEAALALAA 192
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
290-431 |
1.20e-14 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 74.27 E-value: 1.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 290 TYNDFAVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKL 369
Cdd:COG0457 10 AYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQAL 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 594542569 370 GfcqqkhrQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLGARLDVATVLLLNPEYP 431
Cdd:COG0457 90 G-------RYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDA 144
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
45-295 |
1.01e-13 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 71.58 E-value: 1.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 45 LHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcDFQEALCVFLQASDLQP 124
Cdd:COG0457 1 LELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLG-------RYEEALADYEQALELDP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 125 QNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQAKGLLQKM 204
Cdd:COG0457 74 DDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIA 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 205 VDQAKQSLQDASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMVTDTQDNLVKQAQ 284
Cdd:COG0457 154 LEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLLAL 233
|
250
....*....|.
gi 594542569 285 RQLLLTYNDFA 295
Cdd:COG0457 234 RLAALALYQYR 244
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
194-436 |
3.79e-13 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 70.53 E-value: 3.79e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 194 HAQAKGLLQKMVDQAKQSLQDASTLAV----QGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAM 269
Cdd:COG2956 24 PDKAIDLLEEALELDPETVEAHLALGNlyrrRGEYDRAIRIHQKLLERDPDRAEALLELAQDYLKAGLLDRAEELLEKLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 270 DMVTDTQDnlvkqAQRQLLLTYNDfavhcynHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQAL 349
Cdd:COG2956 104 ELDPDDAE-----ALRLLAEIYEQ-------EGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKAL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 350 ALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLGARLDVATVLLLNPE 429
Cdd:COG2956 172 KLDPDCARALLLLAELYLEQG-------DYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPS 244
|
....*..
gi 594542569 430 YPKMAAV 436
Cdd:COG2956 245 DDLLLAL 251
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
21-202 |
5.15e-13 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 69.65 E-value: 5.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 21 YYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQG 100
Cdd:COG0457 45 LYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELG 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 101 qclyelcDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLC 180
Cdd:COG0457 125 -------RYDEAIEAYERALELDPDDADALYNLGIALEKLGRYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLL 197
|
170 180
....*....|....*....|..
gi 594542569 181 YQDLRSALLLDPLHAQAKGLLQ 202
Cdd:COG0457 198 ALLLALEQALRKKLAILTLAAL 219
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
132-411 |
1.73e-12 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 70.79 E-value: 1.73e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 132 RCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQAKGLLQkmvDQAKQS 211
Cdd:COG3914 5 ALLALAALAAAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLALAAGEAAAAAAALL---LLAALL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 212 LQDASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMVTDtqdnlvkqaqrqLLLTY 291
Cdd:COG3914 82 ELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPD------------FAEAY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 292 NDFAVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGF 371
Cdd:COG3914 150 LNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLFALRQACD 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 594542569 372 CQQKHRQFQTAEEHFSEAIRHSPQKPQYY------LHRAKCRQFLQ 411
Cdd:COG3914 230 WEVYDRFEELLAALARGPSELSPFALLYLpdddpaELLALARAWAQ 275
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
325-432 |
9.28e-12 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 65.80 E-value: 9.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 325 YINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSPQKPQYYLHRA 404
Cdd:COG0457 11 YNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLG-------RYEEALADYEQALELDPDDAEALNNLG 83
|
90 100
....*....|....*....|....*...
gi 594542569 405 KCRQFLQNTLGARLDVATVLLLNPEYPK 432
Cdd:COG0457 84 LALQALGRYEEALEDYDKALELDPDDAE 111
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
15-138 |
9.59e-12 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 68.48 E-value: 9.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 15 PAKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAF 94
Cdd:COG3914 109 PDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGN 188
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 594542569 95 VLYLQGQclyelcdFQEALCVFLQASDLQPQNASFSYRCMACLL 138
Cdd:COG3914 189 ALQDLGR-------LEEAIAAYRRALELDPDNADAHSNLLFALR 225
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
207-353 |
9.66e-12 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 63.29 E-value: 9.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 207 QAKQSLQDASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMdmvtdtqdnlvkQAQRQ 286
Cdd:COG4783 3 CAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEAL------------ELDPD 70
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 594542569 287 LLLTYNDFAVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSP 353
Cdd:COG4783 71 EPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDP 137
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
16-156 |
3.30e-11 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 61.75 E-value: 3.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 16 AKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFV 95
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLA 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 594542569 96 LYLQGqclyelcDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQ 156
Cdd:COG4783 82 LLKAG-------DYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALEL 135
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
121-367 |
1.26e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 62.33 E-value: 1.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 121 DLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQAKGL 200
Cdd:COG0457 2 ELDPDDAEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDDAEALYNLGLAYLRLGRYEEALADYEQALELDPDDAEALNN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 201 LqkmvdqakqslqdASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMVTDTQDNLV 280
Cdd:COG0457 82 L-------------GLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALY 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 281 KQAQRQLLLTYNDFAVHCYNHGAYQEGVLLLNKAiRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANL 360
Cdd:COG0457 149 NLGIALEKLGRYEEALELLEKLEAAALAALLAAA-LGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLAL 227
|
....*..
gi 594542569 361 RMGVLQE 367
Cdd:COG0457 228 ALLLALR 234
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
16-400 |
1.61e-10 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 64.62 E-value: 1.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 16 AKVREyynQGHQCLLQEDWEMSVLFFSRALHLDPKLVdFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFV 95
Cdd:TIGR00990 128 AKLKE---KGNKAYRNKDFNKAIKLYSKAIECKPDPV-YYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRANA 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 96 LYLQGQCLYELCDFQeALCVflqasdlqpqNASFSYRCMACLLA--LKRYHDCLALITREVKQGRASADVYIlrarlYNF 173
Cdd:TIGR00990 204 YDGLGKYADALLDLT-ASCI----------IDGFRNEQSAQAVErlLKKFAESKAKEILETKPENLPSVTFV-----GNY 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 174 FQ--KAKLCYQDLRSALLLDplHAQAKGLLQK----MVDQAKQSLQDASTLAVQgkvhralkcincAIENNPLDPNFFF- 246
Cdd:TIGR00990 268 LQsfRPKPRPAGLEDSNELD--EETGNGQLQLglksPESKADESYEEAARAFEK------------ALDLGKLGEKEAIa 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 247 --FRGTLRRRLQQFDHAVEDFLKAMDMVTDTQDNLVKQAQRQLLLTYNDFAvhcYNHgayqegvllLNKAIRDEQNEKGL 324
Cdd:TIGR00990 334 lnLRGTFKCLKGKHLEALADLSKSIELDPRVTQSYIKRASMNLELGDPDKA---EED---------FDKALKLNSEDPDI 401
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 594542569 325 YINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSPQKPQYY 400
Cdd:TIGR00990 402 YYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYKEG-------SIASSMATFRRCKKNFPEAPDVY 470
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
20-201 |
2.26e-10 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 63.86 E-value: 2.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 20 EYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQ 99
Cdd:COG3914 46 LLLAALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLAL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 100 GQclyelcdFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLY---NFFQK 176
Cdd:COG3914 126 GR-------LEEALAALRRALALNPDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALqdlGRLEE 198
|
170 180
....*....|....*....|....*
gi 594542569 177 AKLCYqdlRSALLLDPLHAQAKGLL 201
Cdd:COG3914 199 AIAAY---RRALELDPDNADAHSNL 220
|
|
| TPR |
COG0457 |
Tetratricopeptide (TPR) repeat [General function prediction only]; |
21-191 |
9.14e-10 |
|
Tetratricopeptide (TPR) repeat [General function prediction only];
Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 60.02 E-value: 9.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 21 YYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQG 100
Cdd:COG0457 79 LNNLGLALQALGRYEEALEDYDKALELDPDDAEALYNLGLALLELGRYDEAIEAYERALELDPDDADALYNLGIALEKLG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 101 qclyelcDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLC 180
Cdd:COG0457 159 -------RYEEALELLEKLEAAALAALLAAALGEAALALAAAEVLLALLLALEQALRKKLAILTLAALAELLLLALALLL 231
|
170
....*....|.
gi 594542569 181 YQDLRSALLLD 191
Cdd:COG0457 232 ALRLAALALYQ 242
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
15-127 |
1.02e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 59.16 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 15 PAKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNK-YLNRla 93
Cdd:COG4785 70 PDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYaYLNR-- 147
|
90 100 110
....*....|....*....|....*....|....
gi 594542569 94 fvlylqGQCLYELCDFQEALCVFLQASDLQPQNA 127
Cdd:COG4785 148 ------GIALYYLGRYELAIADLEKALELDPNDP 175
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
29-188 |
1.17e-09 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 60.13 E-value: 1.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 29 LLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcD 108
Cdd:COG2956 121 EQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQG-------D 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 109 FQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALItREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSAL 188
Cdd:COG2956 194 YEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELL-RKALELDPSDDLLLALADLLERKEGLEAALALLERQL 272
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
183-410 |
1.48e-09 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 58.77 E-value: 1.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 183 DLRSALLLDPLHAQAKGLLQKMVDQAKQSLQDASTLAVQGKVHRALK-----CINCAIEN--------NPLDPNFFFFRG 249
Cdd:COG4785 1 LYALALALLLALALAAAAASKAAILLAALLFAAVLALAIALADLALAlaaaaLAAAALAAeridralaLPDLAQLYYERG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 250 TLRRRLQQFDHAVEDFlkamdmvtdtqdnlvkqaqrqllltyndfavhcynhgayqegvlllNKAIRDEQNEKGLYINRG 329
Cdd:COG4785 81 VAYDSLGDYDLAIADF----------------------------------------------DQALELDPDLAEAYNNRG 114
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 330 DCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQF 409
Cdd:COG4785 115 LAYLLLGDYDAALEDFDRALELDPDYAYAYLNRGIALYYLG-------RYELAIADLEKALELDPNDPERALWLYLAERK 187
|
.
gi 594542569 410 L 410
Cdd:COG4785 188 L 188
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
58-192 |
1.66e-09 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 56.74 E-value: 1.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 58 RAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcDFQEALCVFLQASDLQPQNASFSYRCMACL 137
Cdd:COG4783 10 LAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLG-------DLDEAIVLLHEALELDPDEPEARLNLGLAL 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 594542569 138 LALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDP 192
Cdd:COG4783 83 LKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALGRPDEAIAALEKALELDP 137
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
19-210 |
1.73e-09 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 61.16 E-value: 1.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 19 REYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYL 98
Cdd:COG3914 79 ALLELAALLLQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALGRLEEALAALRRALALNPDFAEAYLNLGEALRR 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 99 QGQclyelcdFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITR--EVKQGRASADVYILRARL------ 170
Cdd:COG3914 159 LGR-------LEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRalELDPDNADAHSNLLFALRqacdwe 231
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 594542569 171 -YNFFQKAKLCYQDLRSALLLDPLHAQAKGLLQKMVDQAKQ 210
Cdd:COG3914 232 vYDRFEELLAALARGPSELSPFALLYLPDDDPAELLALARA 272
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
15-127 |
2.89e-09 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 55.78 E-value: 2.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 15 PAKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAF 94
Cdd:COG4235 14 PNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGL 93
|
90 100 110
....*....|....*....|....*....|...
gi 594542569 95 VLYLQGqclyelcDFQEALCVFLQASDLQPQNA 127
Cdd:COG4235 94 AAFQQG-------DYAEAIAAWQKLLALLPADA 119
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
43-170 |
3.31e-09 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 55.78 E-value: 3.31e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 43 RALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcDFQEALCVFLQASDL 122
Cdd:COG4235 8 QALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAG-------DTEEAEELLERALAL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 594542569 123 QPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARL 170
Cdd:COG4235 81 DPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLLEASI 128
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
29-124 |
4.82e-09 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 55.74 E-value: 4.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 29 LLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcD 108
Cdd:COG5010 65 NKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLG-------Q 137
|
90
....*....|....*.
gi 594542569 109 FQEALCVFLQASDLQP 124
Cdd:COG5010 138 DDEAKAALQRALGTSP 153
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
303-428 |
7.86e-09 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 55.35 E-value: 7.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 303 AYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTA 382
Cdd:COG5010 35 NNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLALLYSRSG-------DKDEA 107
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 594542569 383 EEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLGARLDVATVLLLNP 428
Cdd:COG5010 108 KEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSP 153
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
41-215 |
1.02e-08 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 57.05 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 41 FSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcDFQEALCVFLQAS 120
Cdd:COG2956 99 LEKLLELDPDDAEALRLLAEIYEQEGDWEKAIEVLERLLKLGPENAHAYCELAELYLEQG-------DYDEAIEALEKAL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 121 DLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQAKGL 200
Cdd:COG2956 172 KLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLAELYEKLGDPEEALELLRKALELDPSDDLLLAL 251
|
170 180
....*....|....*....|
gi 594542569 201 L-----QKMVDQAKQSLQDA 215
Cdd:COG2956 252 AdllerKEGLEAALALLERQ 271
|
|
| LapB |
COG2956 |
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal ... |
15-156 |
3.00e-08 |
|
Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442196 [Multi-domain] Cd Length: 275 Bit Score: 55.89 E-value: 3.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 15 PAKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAf 94
Cdd:COG2956 141 PENAHAYCELAELYLEQGDYDEAIEALEKALKLDPDCARALLLLAELYLEQGDYEEAIAALERALEQDPDYLPALPRLA- 219
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 594542569 95 vlylqgQCLYELCDFQEALCVFLQASDLQPQNASFSYRCMAcLLALKRYHDCLALITREVKQ 156
Cdd:COG2956 220 ------ELYEKLGDPEEALELLRKALELDPSDDLLLALADL-LERKEGLEAALALLERQLRR 274
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
251-394 |
3.78e-08 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 53.43 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 251 LRRRLQQFDHAVEDFLKAMDMVTDTQDNLVKQAQRQLLLTYNDFAVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYINRGD 330
Cdd:COG5010 17 LTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQALQLDPNNPELYYNLAL 96
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 594542569 331 CFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSP 394
Cdd:COG5010 97 LYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLG-------QDDEAKAALQRALGTSP 153
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
331-429 |
8.90e-08 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 50.55 E-value: 8.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 331 CFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEhFSEAIRHSPQKPQYYLHRAKCRQFL 410
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQG-------RYDEAIA-LEKALKLDPNNAEALLNLAELLLEL 72
|
90
....*....|....*....
gi 594542569 411 QNTLGARLDVATVLLLNPE 429
Cdd:COG3063 73 GDYDEALAYLERALELDPS 91
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
226-356 |
1.35e-07 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 51.16 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 226 RALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMVTDTQDNLVKQAQRQllltyndfavhcYNHGAYQ 305
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEAL------------LAAGDTE 68
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 594542569 306 EGVLLLNKAIR-DEQNEKGLYiNRGDCFFQLGNLAFAEADYKQALALSPLDE 356
Cdd:COG4235 69 EAEELLERALAlDPDNPEALY-LLGLAAFQQGDYAEAIAAWQKLLALLPADA 119
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
24-268 |
1.55e-07 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 55.09 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 24 QGHQCLLQEDWEMSVLFFSRALHLDPKLVdfYVFRAEAFIQLC--DFSSALQNLRRAYSYDPGNNKYLNrlafvlyLQGQ 101
Cdd:TIGR02917 131 RGLAYLGLGQLELAQKSYEQALAIDPRSL--YAKLGLAQLALAenRFDEARALIDEVLTADPGNVDALL-------LKGD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 102 CLYELCDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYnfFQKAKlcY 181
Cdd:TIGR02917 202 LLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIEAGEFEEAEKHADALLKKAPNSPLAHYLKALVD--FQKKN--Y 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 182 QDLRS----ALLLDP-----------------LHAQAKGLLQKMVDQAKQSLQD----ASTLAVQGKVHRALKCINCAIE 236
Cdd:TIGR02917 278 EDAREtlqdALKSAPeylpalllagaseyqlgNLEQAYQYLNQILKYAPNSHQArrllASIQLRLGRVDEAIATLSPALG 357
|
250 260 270
....*....|....*....|....*....|..
gi 594542569 237 NNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKA 268
Cdd:TIGR02917 358 LDPDDPAALSLLGEAYLALGDFEKAAEYLAKA 389
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
248-431 |
2.00e-07 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 54.61 E-value: 2.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 248 RGTLRRRLQQFDHAVEDFLKAMDMVTDTQDNLVKQAQRQLLLTYNDFAvHCYNHGAYQEGVLLLNKAIRDEQNEKglyin 327
Cdd:COG3914 14 AAALLAAAAAAELALAAELEAAALAAALGLALLLLAALAEAAAAALLA-LAAGEAAAAAAALLLLAALLELAALL----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 328 rgdcFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSPQKPQYYLHRAKCR 407
Cdd:COG3914 88 ----LQALGRYEEALALYRRALALNPDNAEALFNLGNLLLALG-------RLEEALAALRRALALNPDFAEAYLNLGEAL 156
|
170 180
....*....|....*....|....
gi 594542569 408 QFLQNTLGARLDVATVLLLNPEYP 431
Cdd:COG3914 157 RRLGRLEEAIAALRRALELDPDNA 180
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
20-384 |
2.16e-07 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 54.70 E-value: 2.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 20 EYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQ 99
Cdd:TIGR02917 24 ELIEAAKSYLQKNKYKAAIIQLKNALQKDPNDAEARFLLGKIYLALGDYAAAEKELRKALSLGYPKNQVLPLLARAYLLQ 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 100 GQclyelcdFQEALCVFLQASDLQPQNAS--FSYRCMAcLLALKRYHDCLALITREVKQGRASADVYILRARL---YNFF 174
Cdd:TIGR02917 104 GK-------FQQVLDELPGKTLLDDEGAAelLALRGLA-YLGLGQLELAQKSYEQALAIDPRSLYAKLGLAQLalaENRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 175 QKAKlcyQDLRSALLLDPLHAQAKGLLqkmvdqakqslqdASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGTLRRR 254
Cdd:TIGR02917 176 DEAR---ALIDEVLTADPGNVDALLLK-------------GDLLLSLGNIELALAAYRKAIALRPNNIAVLLALATILIE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 255 LQQFDHAVEDFlkamdmvtdtqDNLVKQAQRQLLLTYNDFAVHcYNHGAYQEGVLLLNKAIR-DEQNEKGLYInRGDCFF 333
Cdd:TIGR02917 240 AGEFEEAEKHA-----------DALLKKAPNSPLAHYLKALVD-FQKKNYEDARETLQDALKsAPEYLPALLL-AGASEY 306
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 594542569 334 QLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGFCQQKHRQFQTAEE 384
Cdd:TIGR02917 307 QLGNLEQAYQYLNQILKYAPNSHQARRLLASIQLRLGRVDEAIATLSPALG 357
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
46-213 |
3.26e-07 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 51.84 E-value: 3.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 46 HLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcDFQEALCVFLQASDLQPQ 125
Cdd:COG4785 67 LALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEAYNNRGLAYLLLG-------DYDAALEDFDRALELDPD 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 126 NA-SFSYRCMAcLLALKRYHDCLALITREVKQGRASADVYILRarlynFFQKAKLCYQDLRSALLLDPL-HAQAKGLLQK 203
Cdd:COG4785 140 YAyAYLNRGIA-LYYLGRYELAIADLEKALELDPNDPERALWL-----YLAERKLDPEKALALLLEDWAtAYLLQGDTEE 213
|
170
....*....|
gi 594542569 204 MVDQAKQSLQ 213
Cdd:COG4785 214 ARELFKLALA 223
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
29-124 |
4.04e-07 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 48.63 E-value: 4.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 29 LLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQnLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcD 108
Cdd:COG3063 3 LKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELG-------D 74
|
90
....*....|....*.
gi 594542569 109 FQEALCVFLQASDLQP 124
Cdd:COG3063 75 YDEALAYLERALELDP 90
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
299-404 |
1.17e-06 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 48.46 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 299 YNHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQ 378
Cdd:COG4235 28 LRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELLERALALDPDNPEALYLLGLAAFQQG-------D 100
|
90 100
....*....|....*....|....*.
gi 594542569 379 FQTAEEHFSEAIRHSPQKPQYYLHRA 404
Cdd:COG4235 101 YAEAIAAWQKLLALLPADAPARLLEA 126
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
306-436 |
1.31e-06 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 48.08 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 306 EGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEH 385
Cdd:COG4235 1 EAIARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAG-------DTEEAEEL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 594542569 386 FSEAIRHSPQKPQYYLHRAKCRQFLQNTLGARLDVATVLLLNPEYPKMAAV 436
Cdd:COG4235 74 LERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPARLL 124
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
21-126 |
2.23e-06 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 47.88 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 21 YYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQG 100
Cdd:COG4783 41 FALLGEILLQLGDLDEAIVLLHEALELDPDEPEARLNLGLALLKAGDYDEALALLEKALKLDPEHPEAYLRLARAYRALG 120
|
90 100
....*....|....*....|....*.
gi 594542569 101 QclyelcdFQEALCVFLQASDLQPQN 126
Cdd:COG4783 121 R-------PDEAIAALEKALELDPDD 139
|
|
| Spy |
COG3914 |
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ... |
15-131 |
2.25e-06 |
|
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443119 [Multi-domain] Cd Length: 658 Bit Score: 51.15 E-value: 2.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 15 PAKVREYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAF 94
Cdd:COG3914 143 PDFAEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEALNNLGNALQDLGRLEEAIAAYRRALELDPDNADAHSNLLF 222
|
90 100 110
....*....|....*....|....*....|....*..
gi 594542569 95 VLYlqGQCLYELCDFQEALCVFLQASDLQPQNASFSY 131
Cdd:COG3914 223 ALR--QACDWEVYDRFEELLAALARGPSELSPFALLY 257
|
|
| ANAPC3 |
pfam12895 |
Anaphase-promoting complex, cyclosome, subunit 3; Apc3, otherwise known as Cdc27, is one of ... |
64-150 |
8.60e-06 |
|
Anaphase-promoting complex, cyclosome, subunit 3; Apc3, otherwise known as Cdc27, is one of the subunits of the anaphase-promoting complex or cyclosome. The anaphase-promoting complex is a multiprotein subunit E3 ubiquitin ligase complex that controls segregation of chromosomes and exit from mitosis in eukaryotes. The protein members of this family contain TPR repeats just as those of Apc7 do, and it appears that these TPR units bind the C-termini of the APC co-activators CDH1 and CDC20.
Pssm-ID: 463743 [Multi-domain] Cd Length: 82 Bit Score: 44.55 E-value: 8.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 64 QLCDFSSALQNLRRAYSYDPGNNKYLnrlafvlYLQGQCLYELCDFQEALCVfLQASDLQPQNASFSYRCMACLLALKRY 143
Cdd:pfam12895 1 DQHQYKNAIFLAERLLAAEPESPEDA-------YLLAQCLFLNGQYKRAYEL-LRKAKLNGSSLGCRYLFAQCLLKLKKY 72
|
....*..
gi 594542569 144 HDCLALI 150
Cdd:pfam12895 73 DEALDAL 79
|
|
| 3a0801s09 |
TIGR00990 |
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
42-229 |
1.37e-05 |
|
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 48.44 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 42 SRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKylnrlafVLYLQGQCLYELCDFQEALCVFLQASD 121
Cdd:TIGR00990 355 SKSIELDPRVTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPD-------IYYHRAQLHFIKGEFAQAGKDYQKSID 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 122 LQPQNAsFSYRCMACL-LALKRYHDCLALITREVKQGRASADVYILRARLY---NFFQKAKLCYqDLRSAL--LLDPLH- 194
Cdd:TIGR00990 428 LDPDFI-FSHIQLGVTqYKEGSIASSMATFRRCKKNFPEAPDVYNYYGELLldqNKFDEAIEKF-DTAIELekETKPMYm 505
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 195 -------------------AQAKGLLQKMV------DQAKQSLqdASTLAVQGKVHRALK 229
Cdd:TIGR00990 506 nvlplinkalalfqwkqdfIEAENLCEKALiidpecDIAVATM--AQLLLQQGDVDEALK 563
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
24-129 |
2.86e-05 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 47.09 E-value: 2.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 24 QGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNK-YLNrlafvlylQGQC 102
Cdd:PLN03088 8 KAKEAFVDDDFALAVDLYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKaYLR--------KGTA 79
|
90 100
....*....|....*....|....*..
gi 594542569 103 LYELCDFQEALCVFLQASDLQPQNASF 129
Cdd:PLN03088 80 CMKLEEYQTAKAALEKGASLAPGDSRF 106
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
147-283 |
3.05e-05 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 44.23 E-value: 3.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 147 LALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQAKGLLqkmvdqakqslqdASTLAVQGKVHR 226
Cdd:COG4235 3 IARLRQALAANPNDAEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDL-------------AEALLAAGDTEE 69
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 594542569 227 ALKCINCAIENNPLDPNFFFFRGTLRRRLQQFDHAVEDFLKAMDMV-TDTQDNLVKQA 283
Cdd:COG4235 70 AEELLERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLpADAPARLLEAS 127
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
302-394 |
6.98e-05 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 42.08 E-value: 6.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 302 GAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEAdYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQT 381
Cdd:COG3063 6 GDLEEAEEYYEKALELDPDNADALNNLGLLLLEQGRYDEAIA-LEKALKLDPNNAEALLNLAELLLELG-------DYDE 77
|
90
....*....|...
gi 594542569 382 AEEHFSEAIRHSP 394
Cdd:COG3063 78 ALAYLERALELDP 90
|
|
| TPR_1 |
pfam00515 |
Tetratricopeptide repeat; |
325-353 |
1.32e-04 |
|
Tetratricopeptide repeat;
Pssm-ID: 459840 [Multi-domain] Cd Length: 34 Bit Score: 39.71 E-value: 1.32e-04
10 20
....*....|....*....|....*....
gi 594542569 325 YINRGDCFFQLGNLAFAEADYKQALALSP 353
Cdd:pfam00515 4 LYNLGNAYFKLGKYDEALEYYEKALELNP 32
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
41-193 |
1.37e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 43.03 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 41 FSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGQCLYELCDFQEALCVFLQAS 120
Cdd:COG5010 2 RALEGFDRLPLYLLLLTKLRTLVEKYEAALAGANNTKEDELAAAGRDKLAKAFAIESPSDNLYNKLGDFEESLALLEQAL 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 594542569 121 DLQPQNASFSYRCMACLLALKRYHDCLALITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPL 193
Cdd:COG5010 82 QLDPNNPELYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYSNLAALLLSLGQDDEAKAALQRALGTSPL 154
|
|
| TadD |
COG5010 |
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
247-354 |
1.59e-04 |
|
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 42.64 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 247 FRGTLRRRLQQFDHAVEDFLKAMDMVTDTQDnlvkqaqrqlllTYNDFAVHCYNHGAYQEGVLLLNKAIRDEQNEKGLYI 326
Cdd:COG5010 59 PSDNLYNKLGDFEESLALLEQALQLDPNNPE------------LYYNLALLYSRSGDKDEAKEYYEKALALSPDNPNAYS 126
|
90 100
....*....|....*....|....*...
gi 594542569 327 NRGDCFFQLGNLAFAEADYKQALALSPL 354
Cdd:COG5010 127 NLAALLLSLGQDDEAKAALQRALGTSPL 154
|
|
| BepA |
COG4783 |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
91-269 |
2.01e-04 |
|
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 42.10 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 91 RLAFVLYLQGQCLYELCDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYhdclalitrevkqgrasadvyilrarl 170
Cdd:COG4783 2 ACAEALYALAQALLLAGDYDEAEALLEKALELDPDNPEAFALLGEILLQLGDL--------------------------- 54
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 171 ynffQKAklcYQDLRSALLLDPLHAQAKGLLqkmvdqakqslqdASTLAVQGKVHRALKCINCAIENNPLDPNFFFFRGT 250
Cdd:COG4783 55 ----DEA---IVLLHEALELDPDEPEARLNL-------------GLALLKAGDYDEALALLEKALKLDPEHPEAYLRLAR 114
|
170
....*....|....*....
gi 594542569 251 LRRRLQQFDHAVEDFLKAM 269
Cdd:COG4783 115 AYRALGRPDEAIAALEKAL 133
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
251-353 |
4.16e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 40.15 E-value: 4.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 251 LRRRLQQFDHAVEDFLKAMdmvtdtqdnlvkQAQRQLLLTYNDFAVHCYNHGAYQEGvLLLNKAIRDEQNEKGLYINRGD 330
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKAL------------ELDPDNADALNNLGLLLLEQGRYDEA-IALEKALKLDPNNAEALLNLAE 67
|
90 100
....*....|....*....|...
gi 594542569 331 CFFQLGNLAFAEADYKQALALSP 353
Cdd:COG3063 68 LLLELGDYDEALAYLERALELDP 90
|
|
| PLN03088 |
PLN03088 |
SGT1, suppressor of G2 allele of SKP1; Provisional |
310-399 |
4.70e-04 |
|
SGT1, suppressor of G2 allele of SKP1; Provisional
Pssm-ID: 215568 [Multi-domain] Cd Length: 356 Bit Score: 43.24 E-value: 4.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 310 LLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLGfcqqkhrQFQTAEEHFSEA 389
Cdd:PLN03088 24 LYTQAIDLDPNNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLE-------EYQTAKAALEKG 96
|
90
....*....|
gi 594542569 390 IRHSPQKPQY 399
Cdd:PLN03088 97 ASLAPGDSRF 106
|
|
| PilF |
COG3063 |
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
61-152 |
4.77e-04 |
|
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures];
Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 39.77 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 61 AFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcDFQEALcVFLQASDLQPQNASFSYRCMACLLAL 140
Cdd:COG3063 1 LYLKLGDLEEAEEYYEKALELDPDNADALNNLGLLLLEQG-------RYDEAI-ALEKALKLDPNNAEALLNLAELLLEL 72
|
90
....*....|..
gi 594542569 141 KRYHDCLALITR 152
Cdd:COG3063 73 GDYDEALAYLER 84
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
337-512 |
4.93e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 42.21 E-value: 4.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 337 NLAFAEADYKQALALSPLDEGANLRM-GVLQEKLGfcqqkhrQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLG 415
Cdd:COG4785 53 LAAAALAAERIDRALALPDLAQLYYErGVAYDSLG-------DYDLAIADFDQALELDPDLAEAYNNRGLAYLLLGDYDA 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 416 ARLDVATVLLLNPEYPkmAAVMN---TLFpsmtvenvlKSQVAELAKLQLSRMIENGPKNiyPQSTVVQRLLERRKA--- 489
Cdd:COG4785 126 ALEDFDRALELDPDYA--YAYLNrgiALY---------YLGRYELAIADLEKALELDPND--PERALWLYLAERKLDpek 192
|
170 180
....*....|....*....|....*..
gi 594542569 490 --QVLVKLWK--QERLGTPEEEVTLYQ 512
Cdd:COG4785 193 alALLLEDWAtaYLLQGDTEEARELFK 219
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
58-124 |
5.47e-04 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 42.62 E-value: 5.47e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 594542569 58 RAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLafvlylqGQCLYELCDFQEALCVFLQASDLQP 124
Cdd:cd24142 6 KAEELLDQGNFELALKFLQRALELEPNNVEALELL-------GEILLELGDVEEAREVLLRAIELDP 65
|
|
| ACL4-like |
cd24142 |
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 ... |
20-113 |
6.36e-04 |
|
Assembly chaperone of ribosomal protein L4 and similar proteins; Assembly chaperone of RPL4 (ACL4) acts as a chaperone for the L4 ribosomal subunit, encoded by RPL4A and RPL4B, and is required for hierarchical ribosome assembly. It is required for the soluble expression of newly synthesized RPL4 and for the protection of RPL4 from the Tom1-dependent cellular degradation machinery. ACL4 shields ribosomal protein L4 until timely release and insertion into the pre-ribosome is possible, once ribosomal protein L18 is present.
Pssm-ID: 467942 [Multi-domain] Cd Length: 306 Bit Score: 42.62 E-value: 6.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 20 EYYNQGHQCLLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNN--KYlnrlafvLY 97
Cdd:cd24142 2 ELLEKAEELLDQGNFELALKFLQRALELEPNNVEALELLGEILLELGDVEEAREVLLRAIELDPDGGyeKY-------LY 74
|
90
....*....|....*.
gi 594542569 98 LqGQclyeLCDFQEAL 113
Cdd:cd24142 75 L-GQ----LSGGEEAL 85
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
31-417 |
6.54e-04 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 43.15 E-value: 6.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 31 QEDWEMSVLFFSRALHLDPKLVdfYVFRAEAFIQLC--DFSSALQNLRRAYSYDPGNNKYLNrlafvlyLQGQCLYELCD 108
Cdd:TIGR02917 308 LGNLEQAYQYLNQILKYAPNSH--QARRLLASIQLRlgRVDEAIATLSPALGLDPDDPAALS-------LLGEAYLALGD 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 109 FQEALCVFLQASDLQPQNASFSYRcmaclLALKRyhdclaLITREVKQGRAsadvyilrarlyNFFQKAKLCYQDLRSAL 188
Cdd:TIGR02917 379 FEKAAEYLAKATELDPENAAARTQ-----LGISK------LSQGDPSEAIA------------DLETAAQLDPELGRADL 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 189 LL----------DPLHAQAKGLLQKMVDQAKQSLQDASTLAVQGKVHRALKCINCAIEnnpLDPNFFFFRGTLRRRLQQF 258
Cdd:TIGR02917 436 LLilsylrsgqfDKALAAAKKLEKKQPDNASLHNLLGAIYLGKGDLAKAREAFEKALS---IEPDFFPAAANLARIDIQE 512
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 259 DHAVEDFLKAMDMVTDTQDNLvkqaqrQLLLTYNDFAVHcynHGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNL 338
Cdd:TIGR02917 513 GNPDDAIQRFEKVLTIDPKNL------RAILALAGLYLR---TGNEEEAVAWLEKAAELNPQEIEPALALAQYYLGKGQL 583
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 594542569 339 AFAEADYKQALALSPlDEGANLRMgvlqekLGFCQQKHRQFQTAEEHFSEAIRHSPQKPQYYLHRAKCRQFLQNTLGAR 417
Cdd:TIGR02917 584 KKALAILNEAADAAP-DSPEAWLM------LGRAQLAAGDLNKAVSSFKKLLALQPDSALALLLLADAYAVMKNYAKAI 655
|
|
| NlpI |
COG4785 |
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis]; |
70-236 |
7.44e-04 |
|
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443815 [Multi-domain] Cd Length: 223 Bit Score: 41.82 E-value: 7.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 70 SALQNLRRAYSYDPGNNKYLNRLAFVLYLQGQCLYELCDFQEALCVFLQASDLQPQNAS-FSYRCMAcLLALKRYHDCLA 148
Cdd:COG4785 50 AAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDLAEaYNNRGLA-YLLLGDYDAALE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 149 LITREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQA---KGLLQKMVD--QAKQSLQD--ASTLAVQ 221
Cdd:COG4785 129 DFDRALELDPDYAYAYLNRGIALYYLGRYELAIADLEKALELDPNDPERalwLYLAERKLDpeKALALLLEdwATAYLLQ 208
|
170
....*....|....*
gi 594542569 222 GKVHRALKCINCAIE 236
Cdd:COG4785 209 GDTEEARELFKLALA 223
|
|
| TPR_11 |
pfam13414 |
TPR repeat; |
329-370 |
9.13e-04 |
|
TPR repeat;
Pssm-ID: 315977 [Multi-domain] Cd Length: 42 Bit Score: 37.45 E-value: 9.13e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 594542569 329 GDCFFQLGNLAFAEADYKQALALSPLDEGANLRMGVLQEKLG 370
Cdd:pfam13414 1 GDAYYEQGKYEEAIEAYKKALKLDPDNPEAYYNLGLAYYKLG 42
|
|
| PEP_TPR_lipo |
TIGR02917 |
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
29-350 |
9.43e-04 |
|
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 42.76 E-value: 9.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 29 LLQEDWEMSVLFFSRALHLDPKLVDFYVFRAEAFIQLCDFSSALQNLRRAYSYDPGNNKYLNRLAFVLYLQGqclyelcD 108
Cdd:TIGR02917 408 LSQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSGQFDKALAAAKKLEKKQPDNASLHNLLGAIYLGKG-------D 480
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 109 FQEALCVFLQASDLQPQN--ASFSYRCMA-----CLLALKRYHDCLALITREVKQGRASADVYILRAR---LYNFFQKA- 177
Cdd:TIGR02917 481 LAKAREAFEKALSIEPDFfpAAANLARIDiqegnPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNeeeAVAWLEKAa 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 178 KLCYQDLRSALLLDPLH------AQAKGLLQKMVDQAKQSLQD----ASTLAVQGKVHRALKCINCAIENNPLDPNFFFF 247
Cdd:TIGR02917 561 ELNPQEIEPALALAQYYlgkgqlKKALAILNEAADAAPDSPEAwlmlGRAQLAAGDLNKAVSSFKKLLALQPDSALALLL 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 248 RGTLRRRLQQFDHAVEDFLKAMDMVTDTQDnlVKQAQRQLLLTYNDFavhcynhgayqegvlllNKAIRDEQNEKGLYIN 327
Cdd:TIGR02917 641 LADAYAVMKNYAKAITSLKRALELKPDNTE--AQIGLAQLLLAAKRT-----------------ESAKKIAKSLQKQHPK 701
|
330 340
....*....|....*....|...
gi 594542569 328 RGDCFFQLGNLAFAEADYKQALA 350
Cdd:TIGR02917 702 AALGFELEGDLYLRQKDYPAAIQ 724
|
|
| TPR |
smart00028 |
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
325-353 |
1.21e-03 |
|
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.
Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 37.04 E-value: 1.21e-03
10 20
....*....|....*....|....*....
gi 594542569 325 YINRGDCFFQLGNLAFAEADYKQALALSP 353
Cdd:smart00028 4 LYNLGNAYLKLGDYDEALEYYEKALELDP 32
|
|
| NrfG |
COG4235 |
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
71-208 |
1.79e-03 |
|
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 39.22 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 71 ALQNLRRAYSYDPGNnkylnrlAFVLYLQGQCLYELCDFQEALCVFLQASDLQPQNASFSYRCMACLLALKRYHDCLALI 150
Cdd:COG4235 2 AIARLRQALAANPND-------AEGWLLLGRAYLRLGRYDEALAAYEKALRLDPDNADALLDLAEALLAAGDTEEAEELL 74
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 594542569 151 TREVKQGRASADVYILRARLYNFFQKAKLCYQDLRSALLLDPLHAQAKgLLQKMVDQA 208
Cdd:COG4235 75 ERALALDPDNPEALYLLGLAAFQQGDYAEAIAAWQKLLALLPADAPAR-LLEASIAEA 131
|
|
| TPR_12 |
pfam13424 |
Tetratricopeptide repeat; |
324-391 |
2.87e-03 |
|
Tetratricopeptide repeat;
Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 36.98 E-value: 2.87e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 594542569 324 LYINRGDCFFQLGNLAFAEADYKQALAL-SPLDEGANLRMGVLQEKLGFCQQKHRQFQTAEEHFSEAIR 391
Cdd:pfam13424 5 ALNNLAAVLRRLGRYDEALELLEKALEIaRRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALA 73
|
|
| TPR_2 |
pfam07719 |
Tetratricopeptide repeat; This Pfam entry includes outlying Tetratricopeptide-like repeats ... |
324-353 |
3.48e-03 |
|
Tetratricopeptide repeat; This Pfam entry includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by pfam00515.
Pssm-ID: 429619 [Multi-domain] Cd Length: 33 Bit Score: 35.58 E-value: 3.48e-03
10 20 30
....*....|....*....|....*....|
gi 594542569 324 LYINRGDCFFQLGNLAFAEADYKQALALSP 353
Cdd:pfam07719 3 ALYNLGLAYYKLGDYEEALEAYEKALELDP 32
|
|
| CpoB |
COG1729 |
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane ... |
299-398 |
7.49e-03 |
|
Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441335 [Multi-domain] Cd Length: 113 Bit Score: 36.89 E-value: 7.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 594542569 299 YNHGAYQEGVLLLNKAIRDEQNEKGL---YINRGDCFFQLGNLAFAEADYKQALAL---SPLDEGANLRMGVLQEKLGfc 372
Cdd:COG1729 4 LKAGDYDEAIAAFKAFLKRYPNSPLApdaLYWLGEAYYALGDYDEAAEAFEKLLKRypdSPKAPDALLKLGLSYLELG-- 81
|
90 100
....*....|....*....|....*.
gi 594542569 373 qqkhrQFQTAEEHFSEAIRHSPQKPQ 398
Cdd:COG1729 82 -----DYDKARATLEELIKKYPDSEA 102
|
|
| |
