|
Name |
Accession |
Description |
Interval |
E-value |
| Adk |
COG0563 |
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or ... |
17-226 |
1.45e-113 |
|
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or related kinase is part of the Pathway/BioSystem: Pyrimidine biosynthesis
Pssm-ID: 440329 [Multi-domain] Cd Length: 212 Bit Score: 323.62 E-value: 1.45e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:COG0563 2 RIILLGPPGAGKGTQAKRLAEKYGIPHISTGDMLRAAVKAGTELGKKAKEYMDAGELVPDEIVIGLVKERLAQPDCANGF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRS 176
Cdd:COG0563 82 ILDGFPRTVAQAEALDELLAELGIKLDAVIELDVDDEELVERLSGRRVCPNCGATYHVKFNPPKVEGVCDKCGGELVQRA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAA 226
Cdd:COG0563 162 DDNEETVRKRLEVYHEQTAPLIDYYRKKGKLVEIDGEGSIEEVTADILAI 211
|
|
| ADK |
pfam00406 |
Adenylate kinase; |
20-204 |
2.91e-113 |
|
Adenylate kinase;
Pssm-ID: 395329 [Multi-domain] Cd Length: 184 Bit Score: 321.95 E-value: 2.91e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 20 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLD 99
Cdd:pfam00406 1 LLGPPGAGKGTQAEKIVQKYGLPHLSTGDLLRAEIKSGTELGKEAKEYMDKGELVPDEVVVGLVKERLEQNDCKNGFLLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 100 GFPRTVRQAEMLDDLMEkRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDN 179
Cdd:pfam00406 81 GFPRTVPQAEALEELLE-RGIKLDYVIEFDVPDEVLVERLTGRRIHPNSGRSYHLEFNPPKVPGKDDVTGEPLVQRSDDN 159
|
170 180
....*....|....*....|....*
gi 386782359 180 EKALKIRLQAYHTQTTPLIEYYRKR 204
Cdd:pfam00406 160 EETVKKRLETYHKQTKPLIDYYKKK 184
|
|
| adk |
PRK00279 |
adenylate kinase; Reviewed |
17-229 |
2.05e-111 |
|
adenylate kinase; Reviewed
Pssm-ID: 234711 [Multi-domain] Cd Length: 215 Bit Score: 318.25 E-value: 2.05e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:PRK00279 2 RLILLGPPGAGKGTQAKFIAEKYGIPHISTGDMLRAAVKAGTELGKEAKSYMDAGELVPDEIVIGLVKERLAQPDCKNGF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRS 176
Cdd:PRK00279 82 LLDGFPRTIPQAEALDEMLKELGIKLDAVIEIDVPDEELVERLSGRRICPACGRTYHVKFNPPKVEGKCDVCGEELIQRA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSK 229
Cdd:PRK00279 162 DDNEETVRKRLEVYHKQTAPLIDYYKKKGKLKKIDGTGSIDEVFADILKALGK 214
|
|
| adk |
TIGR01351 |
adenylate kinase; Adenylate kinase (EC 2.7.4.3) converts ATP + AMP to ADP + ADP, that is, uses ... |
17-228 |
3.23e-102 |
|
adenylate kinase; Adenylate kinase (EC 2.7.4.3) converts ATP + AMP to ADP + ADP, that is, uses ATP as a phosphate donor for AMP. Most members of this family are known or believed to be adenylate kinase. However, some members accept other nucleotide triphosphates as donors, may be unable to use ATP, and may fail to complement adenylate kinase mutants. An example of a nucleoside-triphosphate--adenylate kinase (EC 2.7.4.10) is SP|Q9UIJ7, a GTP:AMP phosphotransferase. This family is designated subfamily rather than equivalog for this reason. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]
Pssm-ID: 273569 [Multi-domain] Cd Length: 210 Bit Score: 294.91 E-value: 3.23e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLET-PLCKNG 95
Cdd:TIGR01351 1 RLVLLGPPGSGKGTQAKRIAEKYGLPHISTGDLLRAEIKAGTPLGKKAKEYMEKGELVPDEIVNQLVKERLTQnDDNENG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 96 FLLDGFPRTVRQAEMLDDLMekrKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRR 175
Cdd:TIGR01351 81 FILDGFPRTLSQAEALDALL---EEPIDAVIELDVPDEELVERLSGRRICPSCGRVYHLKFNPPKVPGCDDCTGELLVQR 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 386782359 176 SDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:TIGR01351 158 EDDTEEVVKKRLEVYKEQTEPLIDYYKKRGILVQIDGNGPIDEVWKRILEALK 210
|
|
| ADK |
cd01428 |
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine ... |
17-219 |
1.90e-99 |
|
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for homeostasis of adenosine phosphates.
Pssm-ID: 238713 [Multi-domain] Cd Length: 194 Bit Score: 287.21 E-value: 1.90e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:cd01428 1 RILLLGPPGSGKGTQAERLAKKYGLPHISTGDLLREEIASGTELGKKAKEYIDSGKLVPDEIVIKLLKERLKKPDCKKGF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKeKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEefnppkepMKDDITGEPLIRRS 176
Cdd:cd01428 81 ILDGFPRTVDQAEALDELLDEGI-KPDKVIELDVPDEVLIERILGRRICPVSGRVYHL--------GKDDVTGEPLSQRS 151
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVV 219
Cdd:cd01428 152 DDNEETIKKRLEVYKEQTAPLIDYYKKKGKLVEIDGSGDIDEV 194
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Adk |
COG0563 |
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or ... |
17-226 |
1.45e-113 |
|
Adenylate kinase or related kinase [Nucleotide transport and metabolism]; Adenylate kinase or related kinase is part of the Pathway/BioSystem: Pyrimidine biosynthesis
Pssm-ID: 440329 [Multi-domain] Cd Length: 212 Bit Score: 323.62 E-value: 1.45e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:COG0563 2 RIILLGPPGAGKGTQAKRLAEKYGIPHISTGDMLRAAVKAGTELGKKAKEYMDAGELVPDEIVIGLVKERLAQPDCANGF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRS 176
Cdd:COG0563 82 ILDGFPRTVAQAEALDELLAELGIKLDAVIELDVDDEELVERLSGRRVCPNCGATYHVKFNPPKVEGVCDKCGGELVQRA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAA 226
Cdd:COG0563 162 DDNEETVRKRLEVYHEQTAPLIDYYRKKGKLVEIDGEGSIEEVTADILAI 211
|
|
| ADK |
pfam00406 |
Adenylate kinase; |
20-204 |
2.91e-113 |
|
Adenylate kinase;
Pssm-ID: 395329 [Multi-domain] Cd Length: 184 Bit Score: 321.95 E-value: 2.91e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 20 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLD 99
Cdd:pfam00406 1 LLGPPGAGKGTQAEKIVQKYGLPHLSTGDLLRAEIKSGTELGKEAKEYMDKGELVPDEVVVGLVKERLEQNDCKNGFLLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 100 GFPRTVRQAEMLDDLMEkRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDN 179
Cdd:pfam00406 81 GFPRTVPQAEALEELLE-RGIKLDYVIEFDVPDEVLVERLTGRRIHPNSGRSYHLEFNPPKVPGKDDVTGEPLVQRSDDN 159
|
170 180
....*....|....*....|....*
gi 386782359 180 EKALKIRLQAYHTQTTPLIEYYRKR 204
Cdd:pfam00406 160 EETVKKRLETYHKQTKPLIDYYKKK 184
|
|
| adk |
PRK00279 |
adenylate kinase; Reviewed |
17-229 |
2.05e-111 |
|
adenylate kinase; Reviewed
Pssm-ID: 234711 [Multi-domain] Cd Length: 215 Bit Score: 318.25 E-value: 2.05e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:PRK00279 2 RLILLGPPGAGKGTQAKFIAEKYGIPHISTGDMLRAAVKAGTELGKEAKSYMDAGELVPDEIVIGLVKERLAQPDCKNGF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRS 176
Cdd:PRK00279 82 LLDGFPRTIPQAEALDEMLKELGIKLDAVIEIDVPDEELVERLSGRRICPACGRTYHVKFNPPKVEGKCDVCGEELIQRA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSK 229
Cdd:PRK00279 162 DDNEETVRKRLEVYHKQTAPLIDYYKKKGKLKKIDGTGSIDEVFADILKALGK 214
|
|
| adk |
TIGR01351 |
adenylate kinase; Adenylate kinase (EC 2.7.4.3) converts ATP + AMP to ADP + ADP, that is, uses ... |
17-228 |
3.23e-102 |
|
adenylate kinase; Adenylate kinase (EC 2.7.4.3) converts ATP + AMP to ADP + ADP, that is, uses ATP as a phosphate donor for AMP. Most members of this family are known or believed to be adenylate kinase. However, some members accept other nucleotide triphosphates as donors, may be unable to use ATP, and may fail to complement adenylate kinase mutants. An example of a nucleoside-triphosphate--adenylate kinase (EC 2.7.4.10) is SP|Q9UIJ7, a GTP:AMP phosphotransferase. This family is designated subfamily rather than equivalog for this reason. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]
Pssm-ID: 273569 [Multi-domain] Cd Length: 210 Bit Score: 294.91 E-value: 3.23e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLET-PLCKNG 95
Cdd:TIGR01351 1 RLVLLGPPGSGKGTQAKRIAEKYGLPHISTGDLLRAEIKAGTPLGKKAKEYMEKGELVPDEIVNQLVKERLTQnDDNENG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 96 FLLDGFPRTVRQAEMLDDLMekrKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRR 175
Cdd:TIGR01351 81 FILDGFPRTLSQAEALDALL---EEPIDAVIELDVPDEELVERLSGRRICPSCGRVYHLKFNPPKVPGCDDCTGELLVQR 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 386782359 176 SDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:TIGR01351 158 EDDTEEVVKKRLEVYKEQTEPLIDYYKKRGILVQIDGNGPIDEVWKRILEALK 210
|
|
| ADK |
cd01428 |
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine ... |
17-219 |
1.90e-99 |
|
Adenylate kinase (ADK) catalyzes the reversible phosphoryl transfer from adenosine triphosphates (ATP) to adenosine monophosphates (AMP) and to yield adenosine diphosphates (ADP). This enzyme is required for the biosynthesis of ADP and is essential for homeostasis of adenosine phosphates.
Pssm-ID: 238713 [Multi-domain] Cd Length: 194 Bit Score: 287.21 E-value: 1.90e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:cd01428 1 RILLLGPPGSGKGTQAERLAKKYGLPHISTGDLLREEIASGTELGKKAKEYIDSGKLVPDEIVIKLLKERLKKPDCKKGF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKeKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEefnppkepMKDDITGEPLIRRS 176
Cdd:cd01428 81 ILDGFPRTVDQAEALDELLDEGI-KPDKVIELDVPDEVLIERILGRRICPVSGRVYHL--------GKDDVTGEPLSQRS 151
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVV 219
Cdd:cd01428 152 DDNEETIKKRLEVYKEQTAPLIDYYKKKGKLVEIDGSGDIDEV 194
|
|
| PLN02674 |
PLN02674 |
adenylate kinase |
17-228 |
4.10e-91 |
|
adenylate kinase
Pssm-ID: 178279 [Multi-domain] Cd Length: 244 Bit Score: 267.91 E-value: 4.10e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:PLN02674 33 RLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRS 176
Cdd:PLN02674 113 ILDGFPRTVVQAQKLDEMLAKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRK 192
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:PLN02674 193 DDTAAVLKSRLEAFHKQTEPVIDYYAKKGVVANLHAEKPPKEVTAEVQKALS 244
|
|
| PRK14532 |
PRK14532 |
adenylate kinase; Provisional |
19-230 |
3.63e-62 |
|
adenylate kinase; Provisional
Pssm-ID: 184729 [Multi-domain] Cd Length: 188 Bit Score: 192.34 E-value: 3.63e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 19 VLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLL 98
Cdd:PRK14532 4 ILFGPPAAGKGTQAKRLVEERGMVQLSTGDMLRAAIASGSELGQRVKGIMDRGELVSDEIVIALIEERLPEAEAAGGAIF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 99 DGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRlihpksgrsYHEEfnppkepmkdditgepliRRSDD 178
Cdd:PRK14532 84 DGFPRTVAQAEALDKMLASRGQKIDVVIRLKVDDEALIERIVKR---------FEEQ------------------GRPDD 136
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 386782359 179 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKA 230
Cdd:PRK14532 137 NPEVFVTRLDAYNAQTAPLLPYYAGQGKLTEVDGMGSIEAVAASIDAALEGV 188
|
|
| PRK14530 |
PRK14530 |
adenylate kinase; Provisional |
17-231 |
1.30e-58 |
|
adenylate kinase; Provisional
Pssm-ID: 237747 [Multi-domain] Cd Length: 215 Bit Score: 184.22 E-value: 1.30e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRA---MVAS--GSELGKKlKATMDAGKLVSDEMVVELIEKNLETpl 91
Cdd:PRK14530 5 RILLLGAPGAGKGTQSSNLAEEFGVEHVTTGDALRAnkqMDISdmDTEYDTP-GEYMDAGELVPDAVVNEIVEEALSD-- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 92 cKNGFLLDGFPRTVRQAEMLDDLMEkrkekLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEP 171
Cdd:PRK14530 82 -ADGFVLDGYPRNLEQAEYLESITD-----LDVVLYLDVSEEELVDRLTGRRVCPDCGANYHVEFNQPEEEGVCDECGGE 155
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 172 LIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKAT 231
Cdd:PRK14530 156 LIQRDDDTEETVRERLDVFEENTEPVIEHYRDQGVLVEVDGEQTPDEVWADIQDAIDDAT 215
|
|
| adk |
PRK02496 |
adenylate kinase; Provisional |
16-226 |
8.82e-57 |
|
adenylate kinase; Provisional
Pssm-ID: 179433 [Multi-domain] Cd Length: 184 Bit Score: 178.79 E-value: 8.82e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 16 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNG 95
Cdd:PRK02496 2 TRLIFLGPPGAGKGTQAVVLAEHLHIPHISTGDILRQAIKEQTPLGIKAQGYMDKGELVPDQLVLDLVQERLQQPDAANG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 96 FLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRlihpksgrsyheefnppkepmkdditgepliRR 175
Cdd:PRK02496 82 WILDGFPRKVTQAAFLDELLQEIGQSGERVVNLDVPDDVVVERLLAR-------------------------------GR 130
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 386782359 176 SDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAA 226
Cdd:PRK02496 131 KDDTEEVIRRRLEVYREQTAPLIDYYRDRQKLLTIDGNQSVEAVTTELKAA 181
|
|
| PRK14531 |
PRK14531 |
adenylate kinase; Provisional |
17-228 |
5.43e-51 |
|
adenylate kinase; Provisional
Pssm-ID: 172997 [Multi-domain] Cd Length: 183 Bit Score: 163.83 E-value: 5.43e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETpLCKNGF 96
Cdd:PRK14531 4 RLLFLGPPGAGKGTQAARLCAAHGLRHLSTGDLLRSEVAAGSALGQEAEAVMNRGELVSDALVLAIVESQLKA-LNSGGW 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRlihpksgrsyheefnppkepmkdditgepliRRS 176
Cdd:PRK14531 83 LLDGFPRTVAQAEALEPLLEELKQPIEAVVLLELDDAVLIERLLAR-------------------------------GRA 131
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:PRK14531 132 DDNEAVIRNRLEVYREKTAPLIDHYRQRGLLQSVEAQGSIEAITERIEKVLA 183
|
|
| PRK13808 |
PRK13808 |
adenylate kinase; Provisional |
16-230 |
5.69e-51 |
|
adenylate kinase; Provisional
Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 168.53 E-value: 5.69e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 16 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNG 95
Cdd:PRK13808 1 MRLILLGPPGAGKGTQAQRLVQQYGIVQLSTGDMLRAAVAAGTPVGLKAKDIMASGGLVPDEVVVGIISDRIEQPDAANG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 96 FLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSgrsyheefnppkepmkddiTGEPLirR 175
Cdd:PRK13808 81 FILDGFPRTVPQAEALDALLKDKQLKLDAVVELRVNEGALLARVETRVAEMRA-------------------RGEEV--R 139
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 386782359 176 SDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASI---LAAFSKA 230
Cdd:PRK13808 140 ADDTPEVLAKRLASYRAQTEPLVHYYSEKRKLLTVDGMMTIDEVTREIgrvLAAVGAA 197
|
|
| PRK14527 |
PRK14527 |
adenylate kinase; Provisional |
19-228 |
5.71e-50 |
|
adenylate kinase; Provisional
Pssm-ID: 237745 [Multi-domain] Cd Length: 191 Bit Score: 161.50 E-value: 5.71e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 19 VLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLeTPLCKNGFLL 98
Cdd:PRK14527 10 IFLGPPGAGKGTQAERLAQELGLKKLSTGDILRDHVARGTELGQRAKPIMEAGDLVPDELILALIRDEL-AGMEPVRVIF 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 99 DGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLihpksgrsyHEEfnppkepmkdditgepliRRSDD 178
Cdd:PRK14527 89 DGFPRTLAQAEALDRLLEELGARLLAVVLLEVPDEELIRRIVERA---------RQE------------------GRSDD 141
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 386782359 179 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:PRK14527 142 NEETVRRRQQVYREQTQPLVDYYEARGHLKRVDGLGTPDEVYARILKALG 191
|
|
| PRK14528 |
PRK14528 |
adenylate kinase; Provisional |
17-224 |
5.11e-49 |
|
adenylate kinase; Provisional
Pssm-ID: 172994 [Multi-domain] Cd Length: 186 Bit Score: 159.02 E-value: 5.11e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGF 96
Cdd:PRK14528 3 NIIFMGPPGAGKGTQAKILCERLSIPQISTGDILREAVKNQTAMGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 97 LLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIhpKSGrsyheefnppkepmkdditgeplirRS 176
Cdd:PRK14528 83 LLDGFPRTVEQADALDALLKNEGKSIDKAINLEVPDGELLKRLLGRAE--IEG-------------------------RA 135
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 386782359 177 DDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASIL 224
Cdd:PRK14528 136 DDNEATIKNRLDNYNKKTLPLLDFYAAQKKLSQVNGVGSLEEVTSLIQ 183
|
|
| PRK14526 |
PRK14526 |
adenylate kinase; Provisional |
19-229 |
4.07e-46 |
|
adenylate kinase; Provisional
Pssm-ID: 172992 [Multi-domain] Cd Length: 211 Bit Score: 152.31 E-value: 4.07e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 19 VLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLL 98
Cdd:PRK14526 4 VFLGPPGSGKGTIAKILSNELNYYHISTGDLFRENILNSTPLGKEIKQIVENGQLVPDSITIKIVEDKINTIKNNDNFIL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 99 DGFPRTVRQAEMLDDLMEKRKekldsVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDD 178
Cdd:PRK14526 84 DGFPRNINQAKALDKFLPNIK-----IINFLIDEELLIKRLSGRRICKSCNNIFNIYTLPTKEKGICDVCKGDLYQRKDD 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 386782359 179 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSK 229
Cdd:PRK14526 159 KEESLKTRLQEYKLQTKPLIEFYSKCNRLNNIDASKDIDEVKKKLIEIISK 209
|
|
| PLN02459 |
PLN02459 |
probable adenylate kinase |
2-205 |
6.09e-46 |
|
probable adenylate kinase
Pssm-ID: 215253 [Multi-domain] Cd Length: 261 Bit Score: 153.46 E-value: 6.09e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 2 APSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVE 81
Cdd:PLN02459 16 LASACDRSLAKGRNVNWVFLGCPGVGKGTYASRLSKLLGVPHIATGDLVREEIKSSGPLGAQLKEIVNQGKLVPDEIIFS 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 82 LIEKNLETPLCK--NGFLLDGFPRTVRQAEMLDDLMEkrkekLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYH------ 153
Cdd:PLN02459 96 LLSKRLEAGEEEgeSGFILDGFPRTVRQAEILEGVTD-----IDLVVNLKLREEVLVEKCLGRRICSECGKNFNvadidl 170
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 386782359 154 -----------EEFNPPKEPMKDditgepLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRG 205
Cdd:PLN02459 171 kgedgrpgivmPPLLPPPECASK------LITRADDTEEVVKARLRVYKEESQPVEDFYRKRG 227
|
|
| PLN02842 |
PLN02842 |
nucleotide kinase |
22-229 |
1.93e-43 |
|
nucleotide kinase
Pssm-ID: 178435 [Multi-domain] Cd Length: 505 Bit Score: 152.71 E-value: 1.93e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 22 GPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETP-LCKNGFLLDG 100
Cdd:PLN02842 4 GAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSAGTDIGKRAKEFMNSGRLVPDEIVIAMVTGRLSREdAKEKGWLLDG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 101 FPRTVRQAEMLDDLmekrKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPmkdDITGEpLIRRSDDNE 180
Cdd:PLN02842 84 YPRSFAQAQSLEKL----KIRPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNFPPESE---EIKAR-LITRPDDTE 155
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 386782359 181 KALKIRLQAYHTQTTPLIEYYRKrgIHSAIDASQTPDVVFASILAAFSK 229
Cdd:PLN02842 156 EKVKARLQIYKKNAEAILSTYSD--IMVKIDGNRPKEVVFEEISSLLSQ 202
|
|
| aden_kin_iso1 |
TIGR01360 |
adenylate kinase, isozyme 1 subfamily; Members of this family are adenylate kinase, EC 2.7.4.3. ... |
20-230 |
9.21e-41 |
|
adenylate kinase, isozyme 1 subfamily; Members of this family are adenylate kinase, EC 2.7.4.3. This clade is found only in eukaryotes and includes human adenylate kinase isozyme 1 (myokinase). Within the adenylate kinase superfamily, this set appears specifically closely related to a subfamily of eukaryotic UMP-CMP kinases (TIGR01359), rather than to the large clade of bacterial, archaeal, and eukaryotic adenylate kinase family members in TIGR01351.
Pssm-ID: 130427 [Multi-domain] Cd Length: 188 Bit Score: 138.03 E-value: 9.21e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 20 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKN-GFLL 98
Cdd:TIGR01360 8 IVGGPGSGKGTQCEKIVEKYGFTHLSTGDLLRAEVASGSERGKQLQAIMESGDLVPLDTVLDLLKDAMVAALGTSkGFLI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 99 DGFPRTVRQAEMLddlmEKRKEKLDSVIEFSIPDSLLIRRITGRliHPKSGrsyheefnppkepmkdditgeplirRSDD 178
Cdd:TIGR01360 88 DGYPREVKQGEEF----ERRIGPPTLVLYFDCSEDTMVKRLLKR--AETSG-------------------------RVDD 136
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 386782359 179 NEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKA 230
Cdd:TIGR01360 137 NEKTIKKRLETYYKATEPVIAYYETKGKLRKINAEGTVDDVFLQVCTAIDKL 188
|
|
| UMP_CMP_kin_fam |
TIGR01359 |
UMP-CMP kinase family; This subfamily of the adenylate kinase superfamily contains examples of ... |
21-228 |
1.74e-40 |
|
UMP-CMP kinase family; This subfamily of the adenylate kinase superfamily contains examples of UMP-CMP kinase, as well as others proteins with unknown specificity, some currently designated adenylate kinase. All known members are eukaryotic.
Pssm-ID: 273576 [Multi-domain] Cd Length: 185 Bit Score: 137.12 E-value: 1.74e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 21 LGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVA-SGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLD 99
Cdd:TIGR01359 5 LGGPGSGKGTQCAKIVENFGFTHLSAGDLLRAEIKrEGSENGSLIESYIKEGKIVPSEVTVELLKKAIQEDGSSKKFLID 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 100 GFPRTVRQAEMLDDLMEKrKEKLDSVIEFSIPDSLLIRRITGRliHPKSGrsyheefnppkepmkdditgeplirRSDDN 179
Cdd:TIGR01359 85 GFPRNEENLEAWEKLMDN-KVNFKFVLFFDCPEETMIKRLLKR--GQTSG-------------------------RVDDN 136
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 386782359 180 EKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:TIGR01359 137 IETLKKRFRTYNEETLPIIEHFENKGKVKEINAEGSVEEVFEDVEKIFA 185
|
|
| PTZ00088 |
PTZ00088 |
adenylate kinase 1; Provisional |
16-206 |
7.53e-35 |
|
adenylate kinase 1; Provisional
Pssm-ID: 240262 [Multi-domain] Cd Length: 229 Bit Score: 123.76 E-value: 7.53e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 16 IRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPL--CK 93
Cdd:PTZ00088 7 LKIVLFGAPGVGKGTFAEILSKKENLKHINMGNILREEIKAKTTIGKEIQKVVTSGNLVPDNLVIAIVKDEIAKVTddCF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 94 NGFLLDGFPRTVRQAEMLDDLmekrkEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYH------EEFN-PPKEPMKDD 166
Cdd:PTZ00088 87 KGFILDGFPRNLKQCKELGKI-----TNIDLFVNIYLPRNILIKKLLGRRICNTCNRNFNiahirsDPYDmPPILPPADC 161
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 386782359 167 IT--GEP-LIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGI 206
Cdd:PTZ00088 162 EGckGNPkLQKRSDDTEEIVAHRLNTYESTNSPIIQFFKNENC 204
|
|
| PRK14529 |
PRK14529 |
adenylate kinase; Provisional |
19-195 |
5.26e-28 |
|
adenylate kinase; Provisional
Pssm-ID: 237746 [Multi-domain] Cd Length: 223 Bit Score: 105.96 E-value: 5.26e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 19 VLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPlCKNGFLL 98
Cdd:PRK14529 4 LIFGPNGSGKGTQGALVKKKYDLAHIESGAIFREHIGGGTELGKKAKEYIDRGDLVPDDITIPMILETLKQD-GKNGWLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 99 DGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLI------HPKSgrSYHEEFNPPKEpmKDDITGEPL 172
Cdd:PRK14529 83 DGFPRNKVQAEKLWEALQKEGMKLDYVIEILLPREVAKNRIMGRRLckndnnHPNN--IFIDAIKPDGD--VCRVCGGEL 158
|
170 180
....*....|....*....|....
gi 386782359 173 IRRSDD-NEKALKIRLQAYHTQTT 195
Cdd:PRK14529 159 STRADDqDEEAINKRHDIYYDTET 182
|
|
| PLN02200 |
PLN02200 |
adenylate kinase family protein |
20-228 |
1.79e-25 |
|
adenylate kinase family protein
Pssm-ID: 215125 [Multi-domain] Cd Length: 234 Bit Score: 99.58 E-value: 1.79e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 20 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLcKNGFLLD 99
Cdd:PLN02200 48 VLGGPGSGKGTQCEKIVETFGFKHLSAGDLLRREIASNSEHGAMILNTIKEGKIVPSEVTVKLIQKEMESSD-NNKFLID 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 100 GFPRTVRQAEMLDDLMekrKEKLDSVIEFSIPDSLLIRRITGRlihpKSGrsyheefnppkepmkdditgeplirRSDDN 179
Cdd:PLN02200 127 GFPRTEENRIAFERII---GAEPNVVLFFDCPEEEMVKRVLNR----NQG-------------------------RVDDN 174
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 386782359 180 EKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228
Cdd:PLN02200 175 IDTIKKRLKVFNALNLPVIDYYSKKGKLYTINAVGTVDEIFEQVRPIFA 223
|
|
| AAA_17 |
pfam13207 |
AAA domain; |
21-152 |
8.44e-25 |
|
AAA domain;
Pssm-ID: 463810 [Multi-domain] Cd Length: 136 Bit Score: 95.00 E-value: 8.44e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 21 LGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGsELGKKLKAtMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDG 100
Cdd:pfam13207 1 TGVPGSGKTTQLKKLAEKLGFPHISAGDLLREEAKER-GLVEDRDE-MRKLPLEPQKELQKLAAERIAEEAGEGGVIVDG 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 386782359 101 FPRTVRQAEMLDDLMEKRKEKL--DSVIEFSIPDSLLIRRitgRLIHPKSGRSY 152
Cdd:pfam13207 79 HPRIKTPAGYLPGLPVEVLRELkpDAIILLEADPEEILER---RLKDRTRGRDD 129
|
|
| ADK_lid |
pfam05191 |
Adenylate kinase, active site lid; Comparisons of adenylate kinases have revealed a particular ... |
142-177 |
9.00e-17 |
|
Adenylate kinase, active site lid; Comparisons of adenylate kinases have revealed a particular divergence in the active site lid. In some organizms, particularly the Gram-positive bacteria, residues in the lid domain have been mutated to cysteines and these cysteine residues are responsible for the binding of a zinc ion. The bound zinc ion in the lid domain, is clearly structurally homologous to Zinc-finger domains. However, it is unclear whether the adenylate kinase lid is a novel zinc-finger DNA/RNA binding domain, or that the lid bound zinc serves a purely structural function.
Pssm-ID: 461578 [Multi-domain] Cd Length: 36 Bit Score: 70.95 E-value: 9.00e-17
10 20 30
....*....|....*....|....*....|....*.
gi 386782359 142 RLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSD 177
Cdd:pfam05191 1 RRVCPKCGRIYHVYFNPPKVEGVCDVCGGELVQRDD 36
|
|
| AAA_33 |
pfam13671 |
AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the ... |
19-142 |
1.63e-04 |
|
AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.
Pssm-ID: 463952 [Multi-domain] Cd Length: 143 Bit Score: 40.37 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 386782359 19 VLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGselGKKLKATMDAGKLVsDEMVVELIEKNLETplcKNGFLL 98
Cdd:pfam13671 3 LLVGLPGSGKSTLARRLLEELGAVRLSSDDERKRLFGEG---RPSISYYTDATDRT-YERLHELARIALRA---GRPVIL 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 386782359 99 DgFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGR 142
Cdd:pfam13671 76 D-ATNLRRDERARLLALAREYGVPVRIVVFEAPEEVLRERLAAR 118
|
|
| |
