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Conserved domains on  [gi|320542299|ref|NP_001188669|]
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uncharacterized protein Dmel_CG33639, isoform B [Drosophila melanogaster]

Protein Classification

G-protein coupled receptor( domain architecture ID 11606548)

G-protein coupled receptor (GPCR) transmits physiological signals from the outside of the cell to the inside by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
61-384 1.70e-66

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


:

Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 215.19  E-value: 1.70e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  61 YCYGLVLPIICAMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEeFGPAFYTAHL 140
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFL-SYFYAYFLPY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 141 ELYLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPV--MGPPGVVVFLTCLATVIVYLPSIFRGELIKCILGSSDVYVYL 218
Cdd:cd14978   80 IYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWctPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 219 RRDNTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYRRTCERRRKMVLSRphaqghghghghghghghghahg 298
Cdd:cd14978  160 IPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALRKSKKRRRLLRRRR----------------------- 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 299 hgylkDDDPRKFAEERRLFLLLGSTSILFLVCVSPMAILHM--TIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLF 376
Cdd:cd14978  217 -----RLLSRSQRRERRTTIMLIAVVIVFLICNLPAGILNIleAIFGESFLSPIYQLLGDISNLLVVLNSAVNFIIYCLF 291

                 ....*...
gi 320542299 377 SEDFRNTL 384
Cdd:cd14978  292 SSKFRRTF 299
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
61-384 1.70e-66

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 215.19  E-value: 1.70e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  61 YCYGLVLPIICAMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEeFGPAFYTAHL 140
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFL-SYFYAYFLPY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 141 ELYLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPV--MGPPGVVVFLTCLATVIVYLPSIFRGELIKCILGSSDVYVYL 218
Cdd:cd14978   80 IYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWctPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 219 RRDNTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYRRTCERRRKMVLSRphaqghghghghghghghghahg 298
Cdd:cd14978  160 IPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALRKSKKRRRLLRRRR----------------------- 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 299 hgylkDDDPRKFAEERRLFLLLGSTSILFLVCVSPMAILHM--TIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLF 376
Cdd:cd14978  217 -----RLLSRSQRRERRTTIMLIAVVIVFLICNLPAGILNIleAIFGESFLSPIYQLLGDISNLLVVLNSAVNFIIYCLF 291

                 ....*...
gi 320542299 377 SEDFRNTL 384
Cdd:cd14978  292 SSKFRRTF 299
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
77-271 8.69e-10

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 59.23  E-value: 8.69e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299   77 GNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEEFGPAFYTahlelYLGNGCLGVGVMM 155
Cdd:pfam00001   1 GNLLVILVILRnKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDWPFGSALCKIVG-----ALFVVNGYASILL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  156 LLVLTIERYVSVCHPGFARPVMGPP---GVVVFLTCLATVIVYLPSIFRGELIKCilGSSDVYVYLRRDNTIYQQtifyR 232
Cdd:pfam00001  76 LTAISIDRYLAIVHPLRYKRRRTPRrakVLILVIWVLALLLSLPPLLFGWTLTVP--EGNVTVCFIDFPEDLSKP----V 149
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 320542299  233 VYKIMLEVIFKLVPTLVIGGLNMRImmvYRRTCERRRKM 271
Cdd:pfam00001 150 SYTLLISVLGFLLPLLVILVCYTLI---IRTLRKSASKQ 185
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
61-384 1.70e-66

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 215.19  E-value: 1.70e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  61 YCYGLVLPIICAMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEeFGPAFYTAHL 140
Cdd:cd14978    1 VLYGYVLPVICIFGIIGNILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFL-SYFYAYFLPY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 141 ELYLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPV--MGPPGVVVFLTCLATVIVYLPSIFRGELIKCILGSSDVYVYL 218
Cdd:cd14978   80 IYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWctPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYV 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 219 RRDNTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYRRTCERRRKMVLSRphaqghghghghghghghghahg 298
Cdd:cd14978  160 IPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALRKSKKRRRLLRRRR----------------------- 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 299 hgylkDDDPRKFAEERRLFLLLGSTSILFLVCVSPMAILHM--TIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLF 376
Cdd:cd14978  217 -----RLLSRSQRRERRTTIMLIAVVIVFLICNLPAGILNIleAIFGESFLSPIYQLLGDISNLLVVLNSAVNFIIYCLF 291

                 ....*...
gi 320542299 377 SEDFRNTL 384
Cdd:cd14978  292 SSKFRRTF 299
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
65-377 1.02e-17

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 82.72  E-value: 1.02e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  65 LVLPIICAMGIIGNVLNL-VVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHkdrgQWEEFGPAFYTAHLelY 143
Cdd:cd00637    3 VLYILIFVVGLVGNLLVIlVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLL----GRWWFGDALCKLLG--F 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 144 LGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPP--GVVVFLTCLATVIVYLPSIFrgelikciLGSSDVYVYLRRD 221
Cdd:cd00637   77 LQSVSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRraKLLIALIWLLSLLLALPPLL--------GWGVYDYGGYCCC 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 222 NTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYRRTCERRRKMVLSRPHAqghghghghghghghghahghgy 301
Cdd:cd00637  149 CLCWPDLTLSKAYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRR----------------------- 205
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 320542299 302 lkdddpRKFAEERRLFLLLGSTSILFLVCVSPMAILHMTIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLFS 377
Cdd:cd00637  206 ------RRRRRERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFFN 275
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
77-271 8.69e-10

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 59.23  E-value: 8.69e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299   77 GNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEEFGPAFYTahlelYLGNGCLGVGVMM 155
Cdd:pfam00001   1 GNLLVILVILRnKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDWPFGSALCKIVG-----ALFVVNGYASILL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  156 LLVLTIERYVSVCHPGFARPVMGPP---GVVVFLTCLATVIVYLPSIFRGELIKCilGSSDVYVYLRRDNTIYQQtifyR 232
Cdd:pfam00001  76 LTAISIDRYLAIVHPLRYKRRRTPRrakVLILVIWVLALLLSLPPLLFGWTLTVP--EGNVTVCFIDFPEDLSKP----V 149
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 320542299  233 VYKIMLEVIFKLVPTLVIGGLNMRImmvYRRTCERRRKM 271
Cdd:pfam00001 150 SYTLLISVLGFLLPLLVILVCYTLI---IRTLRKSASKQ 185
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
74-257 5.72e-09

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 56.98  E-value: 5.72e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  74 GIIGNVLNLVVLTRRN-MRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEEFGPAFYTAHLELylgngCLGVG 152
Cdd:cd14979   14 GIVGNLLTCIVIARHKsLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYPWAFGDGGCKLYYFLFEA-----CTYAT 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 153 VMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTCLATVIVyLPSIFRGELIKC--ILGSSDVYVYLRRDNTIYQQTIF 230
Cdd:cd14979   89 VLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSI-LCAIPILFLMGIqyLNGPLPGPVPDSAVCTLVVDRST 167
                        170       180
                 ....*....|....*....|....*..
gi 320542299 231 YRVYKIMLEVIFKLVPTLVIGGLNMRI 257
Cdd:cd14979  168 FKYVFQVSTFIFFVLPMFVISILYFRI 194
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
63-249 3.78e-08

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 54.20  E-value: 3.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  63 YGLVLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVhkdRGQWEEFGPAFYTAHle 141
Cdd:cd15001    2 VIIVYVITFVLGLIGNSLVIFVVARfRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYF---SPTWSLGAFLCKAVA-- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 142 lYLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPV--MGPPGVVVFLTCLATVIVYLPSIFRGELIKcILGSSDVYVYLR 219
Cdd:cd15001   77 -YLQLLSFICSVLTLTAISIERYYVILHPMKAKSFctIGRARKVALLIWILSAILASPVLFGQGLVR-YESENGVTVYHC 154
                        170       180       190
                 ....*....|....*....|....*....|...
gi 320542299 220 R---DNTIYQqtIFYRVYkiMLEVIFkLVPTLV 249
Cdd:cd15001  155 QkawPSTLYS--RLYVVY--LAIVIF-FIPLIV 182
7tmA_motilin_R cd15132
motilin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
66-170 6.98e-06

motilin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Motilin receptor, also known as GPR38, is a G-protein coupled receptor that binds the endogenous ligand motilin. Motilin is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. Motilin is also called as the housekeeper of the gut because it is responsible for the proper filling and emptying of the gastrointestinal tract in response to food intake, and for stimulating the production of pepsin. Motilin receptor shares significant amino acid sequence identity with the growth hormone secretagogue receptor (GHSR) and neurotensin receptors (NTS-R1 and 2).


Pssm-ID: 320260 [Multi-domain]  Cd Length: 289  Bit Score: 47.48  E-value: 6.98e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLaIVFAIPFGIRMLvhkdrgqWEE----FGPAFytAHL 140
Cdd:cd15132    6 VCLILFVVGVTGNTMTVLIIRRyKDMRTTTNLYLSSMAVSDLL-ILLCLPFDLYRL-------WKSrpwiFGEFL--CRL 75
                         90       100       110
                 ....*....|....*....|....*....|
gi 320542299 141 ELYLGNGCLGVGVMMLLVLTIERYVSVCHP 170
Cdd:cd15132   76 YHYISEGCTYATILHITALSIERYLAICFP 105
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
74-177 7.88e-06

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 47.48  E-value: 7.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  74 GIIGNVLN-LVVLTRRNMRGTAYIYMRAYSTAALLaIVFAIPFGI-RMLVHKDrgqWEeFGPAFytAHLELYLGNGCLGV 151
Cdd:cd15928   14 GASGNLLTvLVIGRSRDMRTTTNLYLSSLAVSDLL-IFLVLPLDLyRLWRYRP---WR-FGDLL--CRLMYFFSETCTYA 86
                         90       100
                 ....*....|....*....|....*.
gi 320542299 152 GVMMLLVLTIERYVSVCHPGFARPVM 177
Cdd:cd15928   87 SILHITALSVERYLAICHPLRAKVLV 112
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
69-381 1.32e-05

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 46.91  E-value: 1.32e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLN-LVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFgirMLVHKDRGQWeEFGPAfyTAHLELYLGNG 147
Cdd:cd15096    9 LIFIVGLIGNSLViLVVLSNQQMRSTTNILILNLAVADLLFVVFCVPF---TATDYVLPTW-PFGDV--WCKIVQYLVYV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 148 CLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTCLATVIVYLP-SIFRGELIKCILGSSDVY---VYLRRDNT 223
Cdd:cd15096   83 TAYASVYTLVLMSLDRYLAVVHPITSMSIRTERNTLIAIVGIWIVILVANiPVLFLHGVVSYGFSSEAYsycTFLTEVGT 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 224 ---IYQQTIFYRVYkimlevifkLVPTLVIGGLNMriMMVYRRtceRRRKMVLSRPHAQGhghghghghghghghahghg 300
Cdd:cd15096  163 aaqTFFTSFFLFSY---------LIPLTLICVLYM--LMLRRL---RRQKSPGGRRSAES-------------------- 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 301 ylkdddprkFAEERRLFLLLGSTSILFLVCVSPMAILHMTIASEVYP-SFPFQVFRASANLLELINYSLTFYIYCLFSED 379
Cdd:cd15096  209 ---------QRGKRRVTRLVVVVVVVFAICWLPIHIILLLKYYGVLPeTVLYVVIQILSNCLAYGNSCVNPILYAFLSQN 279

                 ..
gi 320542299 380 FR 381
Cdd:cd15096  280 FR 281
7tmA_Bombesin_R-like cd15927
bombesin receptor subfamily, member of the class A family of seven-transmembrane G ...
66-170 5.01e-05

bombesin receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This bombesin subfamily of G-protein coupled receptors consists of neuromedin B receptor (NMBR), gastrin-releasing peptide receptor (GRPR), and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin. Mammalian bombesin-related peptides are widely distributed in the gastrointestinal and central nervous systems. The bombesin family receptors couple mainly to the G proteins of G(q/11) family. NMBR functions as the receptor for the neuropeptide neuromedin B, a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. Gastrin-releasing peptide is an endogenous ligand for GRPR and shares high sequence homology with NMB in the C-terminal region. Both NMB and GRP possess bombesin-like biochemical properties. BRS-3 is classified as an orphan receptor and suggested to play a role in sperm cell division and maturation. BRS-3 interacts with known naturally-occurring bombesin-related peptides with low affinity; however, no endogenous high-affinity ligand to the receptor has been identified. The bombesin receptor family belongs to the seven transmembrane rhodopsin-like G-protein coupled receptors (class A GPCRs), which perceive extracellular signals and transduce them to guanine nucleotide-binding (G) proteins.


Pssm-ID: 320593 [Multi-domain]  Cd Length: 294  Bit Score: 44.95  E-value: 5.01e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAM----GIIGN-VLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHkDRGQWEEFGpafytAHL 140
Cdd:cd15927    2 VVPILFALiflvGVLGNgTLILIFLRNKSMRNVPNIFILSLALGDLLLLLTCVPFTSTIYTL-DSWPFGEFL-----CKL 75
                         90       100       110
                 ....*....|....*....|....*....|
gi 320542299 141 ELYLGNGCLGVGVMMLLVLTIERYVSVCHP 170
Cdd:cd15927   76 SEFLKDTSIGVSVFTLTALSADRYFAIVNP 105
7tmA_GPR151 cd15002
G protein-coupled receptor 151, member of the class A family of seven-transmembrane G ...
66-381 8.28e-05

G protein-coupled receptor 151, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor 151 (GRP151) is an orphan receptor of unknown function. Its expression is conserved in habenular axonal projections of vertebrates and may be a promising novel target for psychiatric drug development. GPR151 shows high sequence similarity with galanin receptors (GALR). GPR151 is a member of the class A rhodopsin-like GPCRs, which represent a widespread protein family that includes the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320133 [Multi-domain]  Cd Length: 280  Bit Score: 44.32  E-value: 8.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAMGIIGNVLNLVVLTRRNMRGTAYI---YMRAYSTAALLAIVFAIPFGIRMLVhkdRGQWeEFGpaFYTAHLEL 142
Cdd:cd15002    5 LLGVICLLGFAGNLMVIGILLNNARKGKPSLidsLILNLSAADLLLLLFSVPFRAAAYS---KGSW-PLG--WFVCKTAD 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 143 YLGNGCLGVGVMMLLVLTIERYVSVCHPgfARPVMGPPGVVvfltCLATVIVYLPSifrgelikCILGSSD-VYVYLRRD 221
Cdd:cd15002   79 WFGHACMAAKSFTIAVLAKACYMYVVNP--TKQVTIKQRRI----TAVVASIWVPA--------CLLPLPQwLFRTVKQS 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 222 NTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYR----RTCERRRkmvlsrphaqghghghghghghghghah 297
Cdd:cd15002  145 EGVYLCILCIPPLAHEFMSAFVKLYPLFVFCLPLTFALFYFwrayGQCQRRG---------------------------- 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 298 ghgyLKDDDPRKFAEERRLFLLLGSTSILFLVC-----VSPMAILHMTIASevypSFPFQVFRASANLLELINYSLTFYI 372
Cdd:cd15002  197 ----TKTQNLRNQIRSRKLTHMLLSVVLAFTILwlpewVAWLWLIHIKSSG----SSPPQLFNVLAQLLAFSISSVNPII 268

                 ....*....
gi 320542299 373 YCLFSEDFR 381
Cdd:cd15002  269 FLLMSEEFR 277
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
63-176 8.49e-05

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 44.12  E-value: 8.49e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  63 YGLVLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHkDRGQWEEFGPAFYTahle 141
Cdd:cd14969    3 LAVYLSLIGVLGVVLNGLVIIVFLKkKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLS-GRWSFGDPGCVIYG---- 77
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 320542299 142 lyLGNGCLGVGVMMLL-VLTIERYVSVCHPGFARPV 176
Cdd:cd14969   78 --FAVTFLGLVSISTLaALAFERYLVIVRPLKAFRL 111
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
66-377 1.08e-04

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 43.96  E-value: 1.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEEFGpaFYTAHLELYLG 145
Cdd:cd14964    4 ILSLLTCLGLLGNLLVLLSLVRLRKRPRSTRLLLASLAACDLLASLVVLVLFFLLGLTEASSRPQAL--CYLIYLLWYGA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 146 NgclGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTCL---ATVIVYLPSIFRgelikcilGSSDVYVYLRRDN 222
Cdd:cd14964   82 N---LASIWTTLVLTYHRYFALCGPLKYTRLSSPGKTRVIILGCwgvSLLLSIPPLVGK--------GAIPRYNTLTGSC 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 223 TIYQQTIFYRVYkiMLEVIFkLVPTLVIGGLNMRIMMVYRRTCERRRKMVLSRPhaqghghghghghghghghahghgyl 302
Cdd:cd14964  151 YLICTTIYLTWG--FLLVSF-LLPLVAFLVIFSRIVLRLRRRVRAIRSAASLNT-------------------------- 201
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 320542299 303 kdddPRKFAEERRLFLLLgstsILFLVCVSPMAIlHMTIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLFS 377
Cdd:cd14964  202 ----DKNLKATKSLLILV----ITFLLCWLPFSI-VFILHALVAAGQGLNLLSILANLLAVLASTLNPFIYCLGN 267
7tmA_prokineticin-R cd15204
prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
64-273 1.09e-04

prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Prokineticins 1 (PROK1) and 2 (PROK2), also known as endocrine gland vascular endothelial factor and Bombina varigata 8, respectively, are multifunctional chemokine-like peptides that are highly conserved across species. Prokineticins can bind with similar affinities to two closely homologous 7-transmembrane G protein coupled receptors, PROKR1 and PROKR2, which are phylogenetically related to the tachykinin receptors. Prokineticins and their GPCRs are widely distributed in human tissues and are involved in numerous physiological roles, including gastrointestinal motility, generation of circadian rhythms, neuron migration and survival, pain sensation, angiogenesis, inflammation, and reproduction. Moreover, different point mutations in genes encoding PROK2 or its receptor (PROKR2) can lead to Kallmann syndrome, a disease characterized by delayed or absent puberty and impaired olfactory function.


Pssm-ID: 320332 [Multi-domain]  Cd Length: 288  Bit Score: 43.80  E-value: 1.09e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  64 GLVLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRgQWEEFGPAFYTAHlel 142
Cdd:cd15204    4 GVVYVLIMLVCGVGNLLLIAVLARyKKLRTLTNLLIANLALSDFLVAVFCLPFEMDYYVVRQR-SWTHGDVLCAVVN--- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 143 YLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTCLATVIVYLPSIFrgelikcilgSSDVYVYLRRDN 222
Cdd:cd15204   80 YLRTVSLYVSTNALLVIAIDRYLVIVHPLKPRMKRRTACVVIALVWVVSLLLAIPSAV----------YSKTTPYANQGK 149
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 223 TI------YQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMM-VYRRTC------------ERRRKMVL 273
Cdd:cd15204  150 IFcgqiwpVDQQAYYKAYYLFLFVLEFVLPVLIMTLCYLRIVRkVWFRRVpgqqteqirrrlRRRRRKVR 219
7tmA_UII-R cd14999
urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled ...
64-263 1.78e-04

urotensin-II receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The urotensin-II receptor (UII-R, also known as the hypocretin receptor) is a member of the class A rhodopsin-like G-protein coupled receptors, which binds the peptide hormone urotensin-II. Urotensin II (UII) is a vasoactive somatostatin-like or cortistatin-like peptide hormone. However, despite the apparent structural similarity to these peptide hormones, they are not homologous to UII. Urotensin II was first identified in fish spinal cord, but later found in humans and other mammals. In fish, UII is secreted at the back part of the spinal cord, in a neurosecretory centre called uroneurapophysa, and is involved in the regulation of the renal and cardiovascular systems. In mammals, urotensin II is the most potent mammalian vasoconstrictor identified to date and causes contraction of arterial blood vessels, including the thoracic aorta. The urotensin II receptor is a rhodopsin-like G-protein coupled receptor, which binds urotensin-II. The receptor was previously known as GPR14, or sensory epithelial neuropeptide-like receptor (SENR). The UII receptor is expressed in the CNS (cerebellum and spinal cord), skeletal muscle, pancreas, heart, endothelium and vascular smooth muscle. It is involved in the pathophysiological control of cardiovascular function and may also influence CNS and endocrine functions. Binding of urotensin II to the receptor leads to activation of phospholipase C, through coupling to G(q/11) family proteins. The resulting increase in intracellular calcium may cause the contraction of vascular smooth muscle.


Pssm-ID: 320130 [Multi-domain]  Cd Length: 282  Bit Score: 43.20  E-value: 1.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  64 GLVLPIICAMGIIGNVLNLVVLTRRNM-RGTAYIYMRAYSTAALLAIVfAIPFGIrmlvhkdrgqweefgpAFYTAHLEL 142
Cdd:cd14999    3 GTVLSLMCVVGVAGNVYTLVVMCLSMRpRASMYVYILNLALADLLYLL-TIPFYV----------------STYFLKKWY 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 143 YLGNGC----------LGVGVMMLLVLTIERYVSVCHP--GFARPVmGPPGVVVFLTCLATVIVYLPSIFRGELIKcilg 210
Cdd:cd14999   66 FGDVGCrllfsldfltMHASIFTLTVMSTERYLAVVKPldTVKRSK-SYRKLLAGVIWLLSLLLTLPMAIMIRLVT---- 140
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 320542299 211 SSDVYVYLRRDNTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYRR 263
Cdd:cd14999  141 VEDKSGGSKRICLPTWSEESYKVYLTLLFSTSIVIPGLVIGYLYIRLARKYWL 193
7tmA_MCHR2 cd15339
melanin concentrating hormone receptor 2, member of the class A family of seven-transmembrane ...
69-170 2.16e-04

melanin concentrating hormone receptor 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320461 [Multi-domain]  Cd Length: 283  Bit Score: 42.88  E-value: 2.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVfAIPFGIRMLVHKdrGQWeEFGPAFYTAHLELYLGNGC 148
Cdd:cd15339    9 ILCSTGLVGNILVLFTIIRSRKKTVPDIYVCNLAVADLVHII-VMPFLIHQWARG--GEW-VFGSPLCTIITSLDTCNQF 84
                         90       100
                 ....*....|....*....|..
gi 320542299 149 LGVGVMMllVLTIERYVSVCHP 170
Cdd:cd15339   85 ACSAIMT--AMSLDRYIALVHP 104
7tmA_MCHR-like cd15088
melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G ...
66-384 3.23e-04

melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320216 [Multi-domain]  Cd Length: 278  Bit Score: 42.44  E-value: 3.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVfAIPFGIRMLVHKdrGQWeEFGPAFYTAHLELYL 144
Cdd:cd15088    6 VFGCICVVGLVGNGIVLYVLVRcSKLRTAPDIFIFNLAVADLLFML-GMPFLIHQFAID--GQW-YFGEVMCKIITALDA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 145 GNGCLGVGVMMllVLTIERYVSVCHP----GFARPVMGPpgVVVFLTCLATVIVYLPSIFRGELIKCILGSSDVYVYLRR 220
Cdd:cd15088   82 NNQFTSTYILT--AMSVDRYLAVVHPirstKYRTRFVAK--LVNVGLWAASFLSILPVWVYSSLIYFPDGTTFCYVSLPS 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 221 DNTIYqqtiFYRVYKIMLEVIFKLVPTLVIgglnmrIMMVYRRTCERRRKMVLSRPHAQGhghghghghghghghahghg 300
Cdd:cd15088  158 PDDLY----WFTIYHFILGFAVPLVVITVC------YILILHRLARGVAPGNQSHGSSRT-------------------- 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 301 ylkdddprkfaeeRRLFLLLGSTSILFLVCVSPMAILHMTIASEVYPSFPFQVFRASANLLELINYSLTFYIYCLFSEDF 380
Cdd:cd15088  208 -------------KRVTKMVILIVVVFIVCWLPFHVVQLVNLAMNRPTLAFEVAYFLSICLGYANSCLNPFVYILVSENF 274

                 ....
gi 320542299 381 RNTL 384
Cdd:cd15088  275 RKRL 278
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
69-382 4.34e-04

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 42.20  E-value: 4.34e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNL-VVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVhkdrgqweeFGPAFYTAHL---ELYL 144
Cdd:cd14993    9 VVFLLALVGNSLVIaVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENV---------YRPWVFGEVLckaVPYL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 145 GNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTC--LATVIVYLPS-IFRGELIKCILGSSDVYVYLRRD 221
Cdd:cd14993   80 QGVSVSASVLTLVAISIDRYLAICYPLKARRVSTKRRARIIIVAiwVIAIIIMLPLlVVYELEEIISSEPGTITIYICTE 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 222 ntIYQQTIFYRVYKIMLEVIFKLVPTLVigglnmrIMMVYRRTCER--RRKMVLSRPHAQghghghghghghghghahgh 299
Cdd:cd14993  160 --DWPSPELRKAYNVALFVVLYVLPLLI-------ISVAYSLIGRRlwRRKPPGDRGSAN-------------------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 300 gylKDDDPRKFAEERRLFLLLGSTSILFLVCVSPMAILHMTIA----SEVYPSFPFQVFRASANLLELINYSLTFYIYCL 375
Cdd:cd14993  211 ---STSSRRILRSKKKVARMLIVVVVLFALSWLPYYVLSILLDfgplSSEESDENFLLILPFAQLLGYSNSAINPIIYCF 287

                 ....*..
gi 320542299 376 FSEDFRN 382
Cdd:cd14993  288 MSKKFRR 294
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
64-170 5.32e-04

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 41.60  E-value: 5.32e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  64 GLVLPIICAMGIIGNVLN-LVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKdRGQWEeFGPAfyTAHLEL 142
Cdd:cd14995    4 TFLVLLICGVGIVGNIMVvLVVLRTRHMRTPTNCYLVSLAVADLMVLVAAGLPNEIESLLG-PDSWI-YGYA--GCLLIT 79
                         90       100
                 ....*....|....*....|....*...
gi 320542299 143 YLGNGCLGVGVMMLLVLTIERYVSVCHP 170
Cdd:cd14995   80 YLQYLGINASSLSITAFTIERYIAICHP 107
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
69-251 8.68e-04

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 41.10  E-value: 8.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHkdrGQWEeFGPAFYTAHLELYLGNg 147
Cdd:cd15210    9 VFMVVGVPGNLLTVLALLRsKKLRTRTNAFIINLSISDLLFCAFNLPLAASTFLH---QAWI-HGETLCRVFPLLRYGL- 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 148 cLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVV--VFLTCLATVIVYLPS----IFRGELIKCILGSSdvyvYLRRD 221
Cdd:cd15210   84 -VAVSLLTLVLITLNRYILIAHPSLYPRIYTRRGLAlmIAGTWIFSFGSFLPLwlgiWGRFGLDPKVCSCS----ILRDK 158
                        170       180       190
                 ....*....|....*....|....*....|
gi 320542299 222 NTiyqqtifyRVYKIMLEVIFKLVPTLVIG 251
Cdd:cd15210  159 KG--------RSPKTFLFVFGFVLPCLVII 180
7tmA_CCK_R cd15206
cholecystokinin receptors, member of the class A family of seven-transmembrane G ...
69-170 1.84e-03

cholecystokinin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320334 [Multi-domain]  Cd Length: 269  Bit Score: 40.07  E-value: 1.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRgqweEFGPAFytAHLELYLGNG 147
Cdd:cd15206    9 VIFLLAVVGNILVIVTLVQnKRMRTVTNVFLLNLAVSDLLLAVFCMPFTLVGQLLRNF----IFGEVM--CKLIPYFQAV 82
                         90       100
                 ....*....|....*....|...
gi 320542299 148 CLGVGVMMLLVLTIERYVSVCHP 170
Cdd:cd15206   83 SVSVSTFTLVAISLERYFAICHP 105
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
62-175 2.00e-03

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 40.08  E-value: 2.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  62 CYGlvlpIICAMGIIGNVLNL-VVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFgirmlvhkdrgqweEFGPA-FYTAH 139
Cdd:cd15393    6 LYG----IISLVAVVGNFLVIwVVAKNRRMRTVTNIFIANLAVADIIIGLFSIPF--------------QFQAAlLQRWV 67
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 320542299 140 LELYLGNGC-------LGVGVMMLLVLTIERYVSVCHPGFARP 175
Cdd:cd15393   68 LPRFMCPFCpfvqvlsVNVSVFTLTVIAVDRYRAVIHPLKARC 110
7tmA_NMU-R2 cd15357
neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G ...
65-170 2.08e-03

neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320479 [Multi-domain]  Cd Length: 293  Bit Score: 39.85  E-value: 2.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  65 LVLPIICAMGIIGNVLN-LVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKDRGQWEEFGPAFYTAHLELY 143
Cdd:cd15357    5 LVYAVIFVVGVIGNLLVcLVILKHQNMKTPTNYYLFSLAVSDLLVLLFGMPLEVYEMWSNYPFLFGPVGCYFKTALFETV 84
                         90       100
                 ....*....|....*....|....*..
gi 320542299 144 lgngCLGvGVMMLLVLTIERYVSVCHP 170
Cdd:cd15357   85 ----CFA-SILSVTTVSVERYVAILHP 106
7tmA_NTSR1 cd15355
neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G ...
72-200 2.66e-03

neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320477 [Multi-domain]  Cd Length: 310  Bit Score: 39.83  E-value: 2.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  72 AMGIIGNVLNLVVLTR----RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVhkdrgqWEEFGPAFYTAHLELY--LG 145
Cdd:cd15355   12 VVGTVGNSITLYTLARkkslQHLQSTVHYHLASLALSDLLILLLAMPVELYNFI------WVHHPWAFGDAACRGYyfLR 85
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 320542299 146 NGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTC--LATVIVYLPSIF 200
Cdd:cd15355   86 DACTYATALNVASLSVERYLAICHPFKAKSLMSRSRTKKFISAiwLASALLAIPMLF 142
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
69-257 2.70e-03

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 39.76  E-value: 2.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFgirMLVHKDRGQWeeFGPAFYTAHLElYLGNG 147
Cdd:cd15205    9 LIFVLALFGNSLVIYVVTRkRAMRTATNIFICSLALSDLLITFFCIPF---TLLQNISSNW--LGGAFMCKMVP-FVQST 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 148 CLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTC--LATVIVYLPSIF--RGELIKCILGSSDVYVYLRRDNT 223
Cdd:cd15205   83 AVVTSILTMTCIAVERHQGIVHPLKMKWQYTNRRAFTMLGLvwIVSVIVGSPMLFvqQLEVKYDFLYEKRHVCCLERWYS 162
                        170       180       190
                 ....*....|....*....|....*....|....
gi 320542299 224 IYQQTIfyrvYKIMLEVIFKLVPTLVIGGLNMRI 257
Cdd:cd15205  163 PTQQKI----YTTFILVILFLLPLTTMLFLYSRI 192
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
64-257 2.81e-03

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 39.72  E-value: 2.81e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  64 GLVLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHKdrgQWEEfgPAFYTAhLEL 142
Cdd:cd14992    4 GVALVVIILVSVVGNFIVIAALARhKNLRGATNYFIASLAISDLLMALFCTPFNFTYVVSL---SWEY--GHFLCK-IVN 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 143 YLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLT-------CLATVIVYLPSIFRgELIKCILGSSDVY 215
Cdd:cd14992   78 YLRTVSVYASSLTLTAIAFDRYFAIIHPLKPRHRQSYTTTVIIIItiwvvslLLAIPQLYYATTEV-LFSVKNQEKIFCC 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 320542299 216 VYLRRDNTIYqqtifYRVYKIMLEVIFKLVPTLVIGGLNMRI 257
Cdd:cd14992  157 QIPPVDNKTY-----EKVYFLLIFVVIFVLPLIVMTLAYARI 193
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
63-170 3.84e-03

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 39.17  E-value: 3.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  63 YGLVLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLaIVFAIPFgiRMLVHKdRGQWEEFGPAFYTAHLE 141
Cdd:cd14982    3 FPIVYSLIFILGLLGNILALWVFLRkMKKRSPTTIYMINLALADLL-FVLTLPF--RIYYYL-NGGWWPFGDFLCRLTGL 78
                         90       100
                 ....*....|....*....|....*....
gi 320542299 142 LYLGNGCLGVGVMMllVLTIERYVSVCHP 170
Cdd:cd14982   79 LFYINMYGSILFLT--CISVDRYLAVVHP 105
7tmA_GPR39 cd15135
G protein-coupled receptor 39, member of the class A family of seven-transmembrane G ...
65-200 5.78e-03

G protein-coupled receptor 39, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR39 is an orphan G protein-coupled receptor that belongs to the growth hormone secretagogue and neurotensin receptor subfamily. GPR39 is expressed in peripheral tissues such as pancreas, gut, gastrointestinal tract, liver, kidney as well as certain regions of the brain. The divalent metal ion Zn(2+) has been shown to be a ligand capable of activating GPR39. Thus, it has been suggested that GPR39 function as a G(q)-coupled Zn(2+)-sensing receptor which involved in the regulation of endocrine pancreatic function, body weight, gastrointestinal mobility, and cell death.


Pssm-ID: 320263 [Multi-domain]  Cd Length: 320  Bit Score: 38.62  E-value: 5.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  65 LVLPIICAMGIIGNVLNLVVL----TRRNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVhkdrgqWEEFGPAFYTAHL 140
Cdd:cd15135    5 LLYSLILVAGILGNSATIKVTqvlqKKGYLQKSVTDHMVSLACSDLLVLLLGMPVELYSAI------WDPFATPSGNIAC 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 320542299 141 ELY--LGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVmgPPGVVVFLTC---LATVIVYLPSIF 200
Cdd:cd15135   79 KIYnfLFEACSYATILNVATLSFERYIAICHPFKYKAL--SGSRVRLLICfvwLTSALVALPLLF 141
7tmA_NTSR cd15130
neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
69-200 5.95e-03

neurotensin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320258 [Multi-domain]  Cd Length: 281  Bit Score: 38.39  E-value: 5.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNLVVLTR----RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVhkdrgqWEEFGPAFYTAHLELY- 143
Cdd:cd15130    9 ALFVVGTVGNSVTLFTLARkkslQSLQSTVRYHLGSLALSDLLILLLAMPVELYNFI------WVHHPWAFGDAGCRGYy 82
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 144 -LGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGV--VVFLTCLATVIVYLPSIF 200
Cdd:cd15130   83 fLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTkkFISAIWLASALLAIPMLF 142
7tmA_GPR139 cd15919
G-protein-coupled receptor GPR139, member of the class A family of seven-transmembrane G ...
69-381 6.26e-03

G-protein-coupled receptor GPR139, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR139, a vertebrate orphan receptor, is very closely related to GPR142, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and plays an important role in mediating insulin secretion and maintaining glucose homeostasis, whereas GPR139 is expressed almost exclusively in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139. These orphan receptors are phylogenetically clustered with invertebrate FMRFamide receptors such as Drosophila melanogaster DrmFMRFa-R.


Pssm-ID: 320585 [Multi-domain]  Cd Length: 270  Bit Score: 38.34  E-value: 6.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  69 IICAMGIIGNVLNLVVLTRRNMR--GTAYIYMRAYSTAALLaIVFAIPFGIRMLvhkdrgqwEEF-----GPAFYTAHLE 141
Cdd:cd15919    9 LLLCLGLPANILTVIILSQLVARrqKSSYNYLLALAAADIL-VLFFIVFVDFLL--------EDFilnkqMPQVLDKIIE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 142 LyLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPG-----VVVFLTCLATVIVYL--PSIFRGELIKCILGSSDV 214
Cdd:cd15919   80 V-LEFSSIHTSIWITVPLTIDRYIAVCHPLKYHTVSYPARtrkviVSVYITCFLTSIPYYwwPNIWIEDYTSTSMHHVLI 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 215 YVYLrrdntiyqqtifYRVYkimlevifkLVPTLVIGGLNMRIMMVYRRTCERRRkmvlsrphaqghghghghghghghg 294
Cdd:cd15919  159 WIHC------------FTVY---------LVPCSIFFVLNSIIVYKLRRKSNFRL------------------------- 192
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 295 hahghgylkdddpRKFAEERRLFLLLGSTSIlFLVCVSP--MAILHMTIASEVYPSFPFQVFRASANLLELINYSLTFYI 372
Cdd:cd15919  193 -------------RGYSTGKTTAILFTITSI-FAILWAPriIMILYHLYVSPINNSWLVHIVSDIANMLALLNTAINFFL 258

                 ....*....
gi 320542299 373 YCLFSEDFR 381
Cdd:cd15919  259 YCFISKRFR 267
7tmA_NTSR2 cd15356
neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G ...
66-200 6.67e-03

neurotensin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320478 [Multi-domain]  Cd Length: 285  Bit Score: 38.31  E-value: 6.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAMGIIGNVLNLVVLTR----RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVhkdrgqWEEFGPAFYTAHLE 141
Cdd:cd15356    6 VYALIWALGAAGNALTIHLVLKkrslRGLQGTVHYHLVSLALSDLLILLISVPIELYNFV------WFHYPWVFGDLVCR 79
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 320542299 142 LY--LGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGV--VVFLTCLATVIVYLPSIF 200
Cdd:cd15356   80 GYyfVRDICSYATVLNIASLSAERYLAICQPLRAKRLLSKRRTkwLLALIWASSLGFALPMAF 142
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
62-197 8.15e-03

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 38.21  E-value: 8.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  62 CYGLVLPIICAMGIIGNVLNLVVLTR-RNMRGTAYIYMRAYSTAALLAIVFAIPFGIRMLVHkdRGQWeEFGPAFYTAHL 140
Cdd:cd15212    2 AQALVLLAIFLLSSLGNCAVIGVIVKhRQLRTVTNAFILSLSLSDLLTALLCLPFAFLTLFS--RPGW-LFGDRLCLANG 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 320542299 141 ELylgNGCLGV-GVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTCLATVIVYLP 197
Cdd:cd15212   79 FF---NACFGIvSTLTMTLISFDRYYAIVRQPQGKIGRRRALQLLAAAWLTALGFSLP 133
7tmA_PAR4 cd15372
protease-activated receptor 4, member of the class A family of seven-transmembrane G ...
63-194 8.64e-03

protease-activated receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors; Protease-acted receptors (PARs) are seven-transmembrane proteins that belong to the class A G-protein coupled receptor (GPCR) family. Four different types of the protease-activated receptors have been identified: PAR1, PAR2, PAR3, and PAR4. PARs are predominantly expressed in platelets and are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 320494 [Multi-domain]  Cd Length: 274  Bit Score: 37.80  E-value: 8.64e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  63 YGLVlpiiCAMGIIGNVLNLVVLTRRNMRGTAYIYMRAYSTAALLAIVfAIPFGIrmlVHKDRGQWEEFGPAFYTAHLEL 142
Cdd:cd15372    7 YTLV----FLVGLPANGLALWVLATQVKRLPSTIFLINLAVADLLLIL-VLPFKI---SYHFLGNNWPFGEGLCRVVTAF 78
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 320542299 143 YLGNgcLGVGVMMLLVLTIERYVSVCHPGFARPVMGpPGVVVFLTCLATVIV 194
Cdd:cd15372   79 FYGN--MYCSVLLLMCISLDRYLAVVHPFFARTLRS-RRFALCMCTAIWLIA 127
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
63-384 8.82e-03

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 37.93  E-value: 8.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  63 YGLVLPIICAMGIIGNVL-NLVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFgirMLVHKDRGQWEeFGPAFYTAHLe 141
Cdd:cd14967    2 LAVFLSLIILVTVFGNLLvILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPF---SAVYTLLGYWP-FGPVLCRFWI- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 142 lYLGNGCLGVGVMMLLVLTIERYVSVCHPGFARPVMGPPGVVVFLTC---LATVIVYLPSIFRGELIKCIlgssdvyvyl 218
Cdd:cd14967   77 -ALDVLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAvwvYSLLISLPPLVGWRDETQPS---------- 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 219 rrDNTIYQQTIFYRVYKIMLEVIFKLVPTLVIGGLNMRIMMVYRRtcerrrkmvlsrphaqghghghghghghghghahg 298
Cdd:cd14967  146 --VVDCECEFTPNKIYVLVSSVISFFIPLLIMIVLYARIFRVARR----------------------------------- 188
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 299 hgylkdddprkfaeERRLFLLLGSTSILFLVCVSPMAILHMTIASEVYPSFPFQVFRASAnLLELINYSLTFYIYCLFSE 378
Cdd:cd14967  189 --------------ELKAAKTLAIIVGAFLLCWLPFFIIYLVSAFCPPDCVPPILYAVFF-WLGYLNSALNPIIYALFNR 253

                 ....*.
gi 320542299 379 DFRNTL 384
Cdd:cd14967  254 DFRRAF 259
7tmA_Mel1 cd15209
melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled ...
66-381 9.40e-03

melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Melatonin (N-acetyl-5-methoxytryptamine) is a naturally occurring sleep-promoting chemical found in vertebrates, invertebrates, bacteria, fungi, and plants. In mammals, melatonin is secreted by the pineal gland and is involved in regulation of circadian rhythms. Its production peaks during the nighttime, and is suppressed by light. Melatonin is shown to be synthesized in other organs and cells of many vertebrates, including the Harderian gland, leukocytes, skin, and the gastrointestinal (GI) tract, which contains several hundred times more melatonin than the pineal gland and is involved in the regulation of GI motility, inflammation, and sensation. Melatonin exerts its pleiotropic physiological effects through specific membrane receptors, named MT1A, MT1B, and MT1C, which belong to the class A rhodopsin-like G-protein coupled receptor family. MT1A and MT1B subtypes are present in mammals, whereas MT1C subtype has been found in amphibians and birds. The melatonin receptors couple to G proteins of the G(i/o) class, leading to the inhibition of adenylate cyclase.


Pssm-ID: 320337 [Multi-domain]  Cd Length: 279  Bit Score: 37.84  E-value: 9.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299  66 VLPIICAMGIIGNVLN-LVVLTRRNMRGTAYIYMRAYSTAALLAIVFAIPFgirMLVHKDRGQWEefgpafytahlelyL 144
Cdd:cd15209    6 VLIVTIVVDVLGNLLViLSVLRNKKLRNAGNIFVVSLSVADLVVAIYPYPL---ILHAIFHNGWT--------------L 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 145 GN-GCLGVGVMMLL----------VLTIERYVSVCHPGFARPVMGPPGVVVF--LTCLATVIVYLPSIFRGELikcilgs 211
Cdd:cd15209   69 GQlHCQASGFIMGLsvigsifnitAIAINRYCYICHSLQYDRLYSLRNTCCYlcLTWLLTVLAVLPNFFIGSL------- 141
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 212 sdvyvylRRDNTIYQQTIFYRV---YKIMLEVIFKLVPTLVIGGLNMRIMMVYRRTCERRRkmvlsrphaqghghghghg 288
Cdd:cd15209  142 -------QYDPRIYSCTFAQTVstvYTITVVVIHFLLPLLIVSFCYLRIWVLVLQVRQRVK------------------- 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320542299 289 hghghghahghgylKDDDPRKFAEERRLFLLLGSTSILFLVCVSPMAILHMTIA---SEVYPSFPFQVFRASAnLLELIN 365
Cdd:cd15209  196 --------------PDQRPKLKPADVRNFLTMFVVFVLFAVCWAPLNFIGLAVAinpKEMAPKIPEWLFVASY-FMAYFN 260
                        330
                 ....*....|....*.
gi 320542299 366 YSLTFYIYCLFSEDFR 381
Cdd:cd15209  261 SCLNAIIYGLLNQNFR 276
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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