|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
46-1048 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 822.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 46 WTHQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEI 125
Cdd:PLN03210 11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 126 MKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKTNEVIRKWRQALAKMGTTTGYDSRNWDNEATMIENIATD 205
Cdd:PLN03210 91 VRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 206 ISNMLNySTPSRDFDGLIGMRAHMKVMEPMLCLHSDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENV---KE 282
Cdd:PLN03210 171 VLGKLN-LTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAfisKS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 283 LMYTRPVCSDEYSAKLHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKESRWFGHGSRIII 362
Cdd:PLN03210 250 MEIYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIV 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 363 TTQDRKLLKAHdGINHIYNVNFPSAYEACQIFCMYAFGQKFPKDGFEELAWEVAKLLGGLPLGLRVMGSHFRGMSKHEWI 442
Cdd:PLN03210 330 ITKDKHFLRAH-GIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWM 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 443 NALPRLRTRLDANIQSILKFSYNALC-EEDKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRI 521
Cdd:PLN03210 409 DMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIV 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 522 KMHNLLEQLGKEIVRhglghQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELsSELNISERAFEGMPNLKF 601
Cdd:PLN03210 489 EMHSLLQEMGKEIVR-----AQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLF 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 602 LRFYYRYGDESDKL--YLPQGLNYLSQKLKILEWDHFPLTCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANLNWMYLN 679
Cdd:PLN03210 563 LKFYTKKWDQKKEVrwHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLR 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 680 HSKILKELPDLSTatnlqelflvkcsslvelpssigkATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLP 759
Cdd:PLN03210 643 GSKNLKEIPDLSM------------------------ATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 760 ANINLESLDELDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPS----------------SIKSWPR------------- 810
Cdd:PLN03210 699 TGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSnlrlenldelilcemkSEKLWERvqpltplmtmlsp 778
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 811 ------------------------------------------------LRDLELSYNQNLKGFMHALDIITTMYFNDIEM 842
Cdd:PLN03210 779 sltrlflsdipslvelpssiqnlhklehleiencinletlptginlesLESLDLSGCSRLRTFPDISTNISDLNLSRTGI 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 843 QEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVV---NCESLERLD---------------CSFHNPKMSLGFI 904
Cdd:PLN03210 859 EEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVdfsDCGALTEASwngspsevamatdniHSKLPSTVCINFI 938
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 905 NCLKLNKEAKeLIIQITTKCTVLPGREVPVYFTHRTKNGSSLRVNL-NRRPLSTASRFKACILLVNKyckenevkevfgr 983
Cdd:PLN03210 939 NCFNLDQEAL-LQQQSIFKQLILSGEEVPSYFTHRTTGASLTNIPLlHISPCQPFFRFRACAVVDSE------------- 1004
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 984 kmmkaSYCIIDLGLDVQ--CRPT----HHFLPP---------SLTEHLYIFD----FEADVTS----NELFCDFQV---- 1036
Cdd:PLN03210 1005 -----SFFIISVSFDIQvcCRFIdrlgNHFDSPyqphvfsvtKKGSHLVIFDccfpLNEDNAPlaelNYDHVDIQFrltn 1079
|
1130
....*....|..
gi 334183667 1037 DSNEMVIKECGI 1048
Cdd:PLN03210 1080 KNSQLKLKGCGI 1091
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
48-211 |
1.33e-63 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 212.61 E-value: 1.33e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 48 HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFID-NEIKRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEIM 126
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 127 KCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKTNEVIRKWRQALAKMGTTtgYDSRNWDNEATMIENIATDI 206
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*
gi 334183667 207 SNMLN 211
Cdd:pfam01582 159 SNKLN 163
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
47-183 |
2.38e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 148.24 E-value: 2.38e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 47 THQVFPSFRG-EDVRRGFLSHIHKEFQRKGITPFIDNEIkRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEI 125
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFE-PGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 126 MKCKEEF-SQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKTNEVI-RKWRQALAKMGT 183
Cdd:smart00255 80 LENALEEgGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKeQFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
597-820 |
2.00e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 92.30 E-value: 2.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 597 PNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANLNWM 676
Cdd:COG4886 62 LSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 677 YLNHSKIlKELPD-LSTATNLQELFLVKCsSLVELPSSIGKATNLQKLYLNmCTSLVELPSSIGNLHKLQKLTLNGCsKL 755
Cdd:COG4886 142 DLSNNQL-TDLPEpLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLS-NNQITDLPEPLGNLTNLEELDLSGN-QL 217
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 334183667 756 EVLPANI-NLESLDELDLTDCLvLKRFPEIS--TNIKVLKLLRTTIKEVPSSIKsWPRLRDLELSYNQ 820
Cdd:COG4886 218 TDLPEPLaNLTNLETLDLSNNQ-LTDLPELGnlTNLEELDLSNNQLTDLPPLAN-LTNLKTLDLSNNQ 283
|
|
| GMPK |
cd00071 |
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ... |
245-275 |
1.30e-04 |
|
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.
Pssm-ID: 238026 Cd Length: 137 Bit Score: 42.90 E-value: 1.30e-04
10 20 30
....*....|....*....|....*....|.
gi 334183667 245 MIGIWGPSGIGKTTIARILFSQFSDSFELSV 275
Cdd:cd00071 1 LIVLSGPSGVGKSTLLKRLLEEFDPNFGFSV 31
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
46-1048 |
0e+00 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 822.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 46 WTHQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEI 125
Cdd:PLN03210 11 WVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 126 MKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKTNEVIRKWRQALAKMGTTTGYDSRNWDNEATMIENIATD 205
Cdd:PLN03210 91 VRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 206 ISNMLNySTPSRDFDGLIGMRAHMKVMEPMLCLHSDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENV---KE 282
Cdd:PLN03210 171 VLGKLN-LTPSNDFEDFVGIEDHIAKMSSLLHLESEEVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAfisKS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 283 LMYTRPVCSDEYSAKLHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAIAKESRWFGHGSRIII 362
Cdd:PLN03210 250 MEIYSSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRIIV 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 363 TTQDRKLLKAHdGINHIYNVNFPSAYEACQIFCMYAFGQKFPKDGFEELAWEVAKLLGGLPLGLRVMGSHFRGMSKHEWI 442
Cdd:PLN03210 330 ITKDKHFLRAH-GIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWM 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 443 NALPRLRTRLDANIQSILKFSYNALC-EEDKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRI 521
Cdd:PLN03210 409 DMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIV 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 522 KMHNLLEQLGKEIVRhglghQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELsSELNISERAFEGMPNLKF 601
Cdd:PLN03210 489 EMHSLLQEMGKEIVR-----AQSNEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEI-DELHIHENAFKGMRNLLF 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 602 LRFYYRYGDESDKL--YLPQGLNYLSQKLKILEWDHFPLTCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANLNWMYLN 679
Cdd:PLN03210 563 LKFYTKKWDQKKEVrwHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLR 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 680 HSKILKELPDLSTatnlqelflvkcsslvelpssigkATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLP 759
Cdd:PLN03210 643 GSKNLKEIPDLSM------------------------ATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 760 ANINLESLDELDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPS----------------SIKSWPR------------- 810
Cdd:PLN03210 699 TGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSnlrlenldelilcemkSEKLWERvqpltplmtmlsp 778
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 811 ------------------------------------------------LRDLELSYNQNLKGFMHALDIITTMYFNDIEM 842
Cdd:PLN03210 779 sltrlflsdipslvelpssiqnlhklehleiencinletlptginlesLESLDLSGCSRLRTFPDISTNISDLNLSRTGI 858
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 843 QEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVV---NCESLERLD---------------CSFHNPKMSLGFI 904
Cdd:PLN03210 859 EEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVdfsDCGALTEASwngspsevamatdniHSKLPSTVCINFI 938
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 905 NCLKLNKEAKeLIIQITTKCTVLPGREVPVYFTHRTKNGSSLRVNL-NRRPLSTASRFKACILLVNKyckenevkevfgr 983
Cdd:PLN03210 939 NCFNLDQEAL-LQQQSIFKQLILSGEEVPSYFTHRTTGASLTNIPLlHISPCQPFFRFRACAVVDSE------------- 1004
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 984 kmmkaSYCIIDLGLDVQ--CRPT----HHFLPP---------SLTEHLYIFD----FEADVTS----NELFCDFQV---- 1036
Cdd:PLN03210 1005 -----SFFIISVSFDIQvcCRFIdrlgNHFDSPyqphvfsvtKKGSHLVIFDccfpLNEDNAPlaelNYDHVDIQFrltn 1079
|
1130
....*....|..
gi 334183667 1037 DSNEMVIKECGI 1048
Cdd:PLN03210 1080 KNSQLKLKGCGI 1091
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
48-211 |
1.33e-63 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 212.61 E-value: 1.33e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 48 HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFID-NEIKRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEIM 126
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDdRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 127 KCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKTNEVIRKWRQALAKMGTTtgYDSRNWDNEATMIENIATDI 206
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*
gi 334183667 207 SNMLN 211
Cdd:pfam01582 159 SNKLN 163
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
47-183 |
2.38e-41 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 148.24 E-value: 2.38e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 47 THQVFPSFRG-EDVRRGFLSHIHKEFQRKGITPFIDNEIkRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEI 125
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFE-PGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAA 79
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 126 MKCKEEF-SQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKTNEVI-RKWRQALAKMGT 183
Cdd:smart00255 80 LENALEEgGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKeQFWKKALYAVPS 139
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
597-820 |
2.00e-19 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 92.30 E-value: 2.00e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 597 PNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNFCTEYLVELNMRFSKLHKLWEGNRPLANLNWM 676
Cdd:COG4886 62 LSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEELANLTNLKEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 677 YLNHSKIlKELPD-LSTATNLQELFLVKCsSLVELPSSIGKATNLQKLYLNmCTSLVELPSSIGNLHKLQKLTLNGCsKL 755
Cdd:COG4886 142 DLSNNQL-TDLPEpLGNLTNLKSLDLSNN-QLTDLPEELGNLTNLKELDLS-NNQITDLPEPLGNLTNLEELDLSGN-QL 217
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 334183667 756 EVLPANI-NLESLDELDLTDCLvLKRFPEIS--TNIKVLKLLRTTIKEVPSSIKsWPRLRDLELSYNQ 820
Cdd:COG4886 218 TDLPEPLaNLTNLETLDLSNNQ-LTDLPELGnlTNLEELDLSNNQLTDLPPLAN-LTNLKTLDLSNNQ 283
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
658-893 |
4.68e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 81.90 E-value: 4.68e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 658 SKLHKLWEGNRPLANLNWMYLNHSKILKELPDLstaTNLQELFLVKCSSLVELpssigkaTNLQKLYLNmCTSLVELPSS 737
Cdd:COG4886 63 SSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDL---TNLTELDLSGNEELSNL-------TNLESLDLS-GNQLTDLPEE 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 738 IGNLHKLQKLTLNGCsKLEVLPANI-NLESLDELDLTDCLvlkrfpeistnikvlkllrttIKEVPSSIKSWPRLRDLEL 816
Cdd:COG4886 132 LANLTNLKELDLSNN-QLTDLPEPLgNLTNLKSLDLSNNQ---------------------LTDLPEELGNLTNLKELDL 189
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 334183667 817 SYNQ--NLKGFMHALDIITTMYFNDIEMQEIPLWVKKISRLQTLILNGCkKLVSLPQLPdslsylkvvNCESLERLDCS 893
Cdd:COG4886 190 SNNQitDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNN-QLTDLPELG---------NLTNLEELDLS 258
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
50-149 |
1.32e-15 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 73.89 E-value: 1.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 50 VFPSFRGEDvrRGFLSHIHKEFQRKGITPFID-NEIKRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELvEIMKC 128
Cdd:pfam13676 1 VFISYAGED--RAWAEWLADALEAAGYRVWLDrWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEW-EAALA 77
|
90 100
....*....|....*....|.
gi 334183667 129 KEEFSQIVIPIfyRVDPSDVK 149
Cdd:pfam13676 78 DPEGRKRLIPV--RLECDLEL 96
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
48-205 |
2.33e-14 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 72.55 E-value: 2.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 48 HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNE-IKRGESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEIM 126
Cdd:PLN03194 27 CDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKnMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFCLHELALIM 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 127 KCKEEfsqiVIPIFYRVDPSDVKkltgnfgnvFKNNCVGKTNEvIRKWRQALAKMGTTTG--YDS--RNWDNEATMIENI 202
Cdd:PLN03194 107 ESKKR----VIPIFCDVKPSQLR---------VVDNGTCPDEE-IRRFNWALEEAKYTVGltFDSlkGNWSEVVTMASDA 172
|
...
gi 334183667 203 ATD 205
Cdd:PLN03194 173 VIK 175
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
653-893 |
2.96e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 69.96 E-value: 2.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 653 LNMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLV 732
Cdd:COG4886 6 LSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 733 EL-PSSIGNLHKLQKLTLNGCSKLEVLPaniNLESldeLDLTDCLVLKRFPEIS--TNIKVLKLLRTTIKEVPSSIKSWP 809
Cdd:COG4886 86 LLgLTDLGDLTNLTELDLSGNEELSNLT---NLES---LDLSGNQLTDLPEELAnlTNLKELDLSNNQLTDLPEPLGNLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 810 RLRDLELSYNQ--NLKGFMHALDIITTMYFNDIEMQEIPLWVKKISRLQTLILNGCKklvsLPQLPDSLSylkvvNCESL 887
Cdd:COG4886 160 NLKSLDLSNNQltDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQ----LTDLPEPLA-----NLTNL 230
|
....*.
gi 334183667 888 ERLDCS 893
Cdd:COG4886 231 ETLDLS 236
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
238-465 |
1.23e-10 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 62.78 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 238 LHSDEVRMIGIWGPSGIGKTTIARILFSQF---------------SDSFELSVFMENVKELMYTRPVcsdeysaklhlqk 302
Cdd:pfam00931 13 SEKDEPGIVGIHGMGGVGKTTLAAQIFNDFdeveghfdsvawvvvSKTFTISTLQQTILQNLGLSED------------- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 303 qfmsqiinhkDIEIPHLGVVEDR----LKDKKVFIVLDNIDQSIQLDAIAKESRWFGHGSRIIITTQDRKLLKAHDGINH 378
Cdd:pfam00931 80 ----------DWDNKEEGELARKirraLLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGGPSD 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 379 IYNVNFPSAYEACQIFCMYAFGQKF-PKDGFEELAWEVAKLLGGLPLGLRVMGSHFRgmSKH---EWINALPRLRTRLDA 454
Cdd:pfam00931 150 PHEVELLEPDEAWELFENKVFPKTLgECELLEDVAKEIVEKCRGLPLALKVLGGLLS--CKKtveEWKHVYDVLQSELKS 227
|
250
....*....|....*..
gi 334183667 455 N------IQSILKFSYN 465
Cdd:pfam00931 228 NsyslnsVRSILQLSYE 244
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
617-858 |
1.44e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 51.86 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 617 LPQGLNYLSqKLKILEWDHFPLTCMPSNF--CTEyLVELNMRFSKLHKLWEGNRPLANLNWMYLNHSKIlKELPD-LSTA 693
Cdd:COG4886 128 LPEELANLT-NLKELDLSNNQLTDLPEPLgnLTN-LKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQI-TDLPEpLGNL 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 694 TNLQELFLVKCSsLVELPSSIGKATNLQKLYLNMC-----------TSLVEL---------PSSIGNLHKLQKLTLNGCS 753
Cdd:COG4886 205 TNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNNqltdlpelgnlTNLEELdlsnnqltdLPPLANLTNLKTLDLSNNQ 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 754 ----KLEVLPANINLESLDEL--DLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMH 827
Cdd:COG4886 284 ltdlKLKELELLLGLNSLLLLllLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLL 363
|
250 260 270
....*....|....*....|....*....|.
gi 334183667 828 ALDIITTMYFNDIEMQEIPLWVKKISRLQTL 858
Cdd:COG4886 364 TLLLTLGLLGLLEATLLTLALLLLTLLLLLL 394
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
649-667 |
1.04e-05 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 42.71 E-value: 1.04e-05
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
672-820 |
1.54e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.08 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 672 NLNWMYLNHSKILKELP-DLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLYL--NMCTSlvELPSSIGNLHKLQklt 748
Cdd:PLN00113 213 SLKWIYLGYNNLSGEIPyEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLyqNKLSG--PIPPSIFSLQKLI--- 287
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 334183667 749 lngcsklevlpaninlesldELDLTDCLVLKRFPEISTNIKVLKLLR----TTIKEVPSSIKSWPRLRDLELSYNQ 820
Cdd:PLN00113 288 --------------------SLDLSDNSLSGEIPELVIQLQNLEILHlfsnNFTGKIPVALTSLPRLQVLQLWSNK 343
|
|
| CDC6 |
COG1474 |
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair]; |
248-340 |
1.74e-05 |
|
Cdc6-related protein, AAA superfamily ATPase [Replication, recombination and repair];
Pssm-ID: 441083 [Multi-domain] Cd Length: 389 Bit Score: 48.31 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 248 IWGPSGIGKTTIARILFSQFSDSFElsvfmenvKELMYTRPV---CSDEYSaklhlQKQFMSQIINH--KDIEIPHLGV- 321
Cdd:COG1474 56 IYGPTGTGKTAVAKYVLEELEEEAE--------ERGVDVRVVyvnCRQAST-----RYRVLSRILEElgSGEDIPSTGLs 122
|
90 100
....*....|....*....|....*...
gi 334183667 322 ---VEDRL------KDKKVFIVLDNIDQ 340
Cdd:COG1474 123 tdeLFDRLyealdeRDGVLVVVLDEIDY 150
|
|
| PRK13342 |
PRK13342 |
recombination factor protein RarA; Reviewed |
238-283 |
3.19e-05 |
|
recombination factor protein RarA; Reviewed
Pssm-ID: 237355 [Multi-domain] Cd Length: 413 Bit Score: 47.39 E-value: 3.19e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 334183667 238 LHSdevrMIgIWGPSGIGKTTIARILFSQFSDSFE-LSVFMENVKEL 283
Cdd:PRK13342 36 LSS----MI-LWGPPGTGKTTLARIIAGATDAPFEaLSAVTSGVKDL 77
|
|
| RarA |
COG2256 |
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, ... |
238-283 |
4.47e-05 |
|
Replication-associated recombination protein RarA (DNA-dependent ATPase) [Replication, recombination and repair];
Pssm-ID: 441857 [Multi-domain] Cd Length: 439 Bit Score: 47.36 E-value: 4.47e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 334183667 238 LHSdevrMIgIWGPSGIGKTTIARILFSQFSDSFE-LSVFMENVKEL 283
Cdd:COG2256 49 LSS----MI-LWGPPGTGKTTLARLIANATDAEFVaLSAVTSGVKDI 90
|
|
| GMPK |
cd00071 |
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), ... |
245-275 |
1.30e-04 |
|
Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), also known as guanylate kinase (GKase), catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to guanosine monophosphate (GMP) to yield adenosine diphosphate (ADP) and guanosine diphosphate (GDP). It plays an essential role in the biosynthesis of guanosine triphosphate (GTP). This enzyme is also important for the activation of some antiviral and anticancer agents, such as acyclovir, ganciclovir, carbovir, and thiopurines.
Pssm-ID: 238026 Cd Length: 137 Bit Score: 42.90 E-value: 1.30e-04
10 20 30
....*....|....*....|....*....|.
gi 334183667 245 MIGIWGPSGIGKTTIARILFSQFSDSFELSV 275
Cdd:cd00071 1 LIVLSGPSGVGKSTLLKRLLEEFDPNFGFSV 31
|
|
| PRK15386 |
PRK15386 |
type III secretion effector GogB; |
709-912 |
1.88e-04 |
|
type III secretion effector GogB;
Pssm-ID: 237954 [Multi-domain] Cd Length: 426 Bit Score: 45.25 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 709 ELPSSIGKATNLQKLYLNMC--TSLVELPssignlHKLQKLTLNGCSKLEVLPANINlESLDELDLTDCLVLKRFPEIST 786
Cdd:PRK15386 43 EITPQIEEARASGRLYIKDCdiESLPVLP------NELTEITIENCNNLTTLPGSIP-EGLEKLTVCHCPEISGLPESVR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 787 NIKVLKLLRTTIKEVPSSIKSwprlrdleLSYNqnlkgfmhaldIITTMYFNDIEMQEIPlwvkkisRLQTLILNGCKKL 866
Cdd:PRK15386 116 SLEIKGSATDSIKNVPNGLTS--------LSIN-----------SYNPENQARIDNLISP-------SLKTLSLTGCSNI 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 334183667 867 VSLPQLPDSLSYLKvVNCESLERLDCSFHN-PK-MSLGFINCLKLNKE 912
Cdd:PRK15386 170 ILPEKLPESLQSIT-LHIEQKTTWNISFEGfPDgLDIDLQNSVLLSPD 216
|
|
| C-JID |
pfam20160 |
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ... |
927-1022 |
4.03e-04 |
|
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.
Pssm-ID: 466313 Cd Length: 108 Bit Score: 40.89 E-value: 4.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 927 LPGREVPVYFTHRtKNGSSLRVNLNRRPLSTAS-RFKACILLVNKYCKENEVKEVFGRKMMKAS--------------YC 991
Cdd:pfam20160 1 LPGSQIPEWFNHQ-STGSSISIKLPENWYNDNFlGFAVCAVGSLIPSLHNFLGYIHFFLIPLVSlwdtskangktpndYG 79
|
90 100 110
....*....|....*....|....*....|.
gi 334183667 992 IIDLGldVQCRPTHHFLPPSLTEHLYIFDFE 1022
Cdd:pfam20160 80 RIEAS--FEFPSDLHEIKQCGVRLIYKDEVE 108
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
701-893 |
2.76e-03 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 41.46 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 701 LVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANINL---ESLDELDLTDCLV 777
Cdd:COG4886 2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlllLSLLLLLLLSLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 778 LKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELSYNQ--NLKGFMHALDIITTMYFNDIEMQEIPLWVKKISRL 855
Cdd:COG4886 82 LSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQltDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNL 161
|
170 180 190
....*....|....*....|....*....|....*...
gi 334183667 856 QTLILNGCKklvsLPQLPDSLSYLKvvnceSLERLDCS 893
Cdd:COG4886 162 KSLDLSNNQ----LTDLPEELGNLT-----NLKELDLS 190
|
|
| RNA_helicase |
pfam00910 |
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding ... |
248-292 |
3.21e-03 |
|
RNA helicase; This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Pssm-ID: 459992 Cd Length: 102 Bit Score: 37.97 E-value: 3.21e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 334183667 248 IWGPSGIGKTTIARILFSQFSDSFELSvfmenvKELMYTRPVCSD 292
Cdd:pfam00910 3 LYGPPGCGKSTLAKYLARALLKKLGLP------KDSVYSRNPDDD 41
|
|
| Udk |
COG0572 |
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway ... |
239-269 |
8.13e-03 |
|
Uridine kinase [Nucleotide transport and metabolism]; Uridine kinase is part of the Pathway/BioSystem: Pyrimidine salvage
Pssm-ID: 440337 [Multi-domain] Cd Length: 206 Bit Score: 39.05 E-value: 8.13e-03
10 20 30
....*....|....*....|....*....|.
gi 334183667 239 HSDEVRMIGIWGPSGIGKTTIARILFSQFSD 269
Cdd:COG0572 3 RSGKPRIIGIAGPSGSGKTTFARRLAEQLGA 33
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
677-819 |
8.84e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 39.00 E-value: 8.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 677 YLNHSKIlKELPDLSTATNLQELFLV--KCSSLVELPSsigkATNLQKLYL--NMCTSLVELpssiGNLHKLQKLTLNG- 751
Cdd:cd21340 8 YLNDKNI-TKIDNLSLCKNLKVLYLYdnKITKIENLEF----LTNLTHLYLqnNQIEKIENL----ENLVNLKKLYLGGn 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334183667 752 ----------CSKLEVL----------------PANIN--LESLDELDLTDClvlkRFPEIStNIKVLKLLRT------- 796
Cdd:cd21340 79 risvveglenLTNLEELhienqrlppgekltfdPRSLAalSNSLRVLNISGN----NIDSLE-PLAPLRNLEQldasnnq 153
|
170 180
....*....|....*....|....*
gi 334183667 797 --TIKEVPSSIKSWPRLRDLELSYN 819
Cdd:cd21340 154 isDLEELLDLLSSWPSLRELDLTGN 178
|
|
| Gmk |
COG0194 |
Guanylate kinase [Nucleotide transport and metabolism]; |
250-275 |
9.40e-03 |
|
Guanylate kinase [Nucleotide transport and metabolism];
Pssm-ID: 439964 Cd Length: 190 Bit Score: 38.51 E-value: 9.40e-03
10 20
....*....|....*....|....*.
gi 334183667 250 GPSGIGKTTIARILFSQFSDsFELSV 275
Cdd:COG0194 9 GPSGAGKTTLVKALLERDPD-LRFSV 33
|
|
| |
