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Conserved domains on  [gi|257743264|ref|NP_001158159|]
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protein THEMIS isoform 3 [Homo sapiens]

Protein Classification

CABIT domain-containing protein( domain architecture ID 12119421)

CABIT domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
3-230 7.71e-58

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


:

Pssm-ID: 463686  Cd Length: 261  Bit Score: 194.97  E-value: 7.71e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264    3 GNECCFSTGEVIKITGLK-VKKIIAEICEQiEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHI-------GP 74
Cdd:pfam12736  15 GSVYCLSKGDVLLIHGLKqAKKVVAQEVEE-GRGVVGPKLLIPLSYPGLFKLLADEGPFESVEELARSFPIrvlakeeGP 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264   75 SRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGE----------IMVSCAVarNHQTHSFNLPLSQEGEFYE-CED 143
Cdd:pfam12736  94 DSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGkeelasvtvgDYLICLV--NQTGESVLLPLSCRGRFSEeCED 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  144 ERIYTLKEIVE-WKIPKNRTRTVNLTDFSNKwdstnpfpKDFYGTLILKPVYEIQGVMK--------FRKDIIRILPSLD 214
Cdd:pfam12736 172 EGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEPVYEEQAVVAspllipvpFRKLEVPIPSDLD 243
                         250
                  ....*....|....*...
gi 257743264  215 VEVKDIT--DSYDANWFL 230
Cdd:pfam12736 244 VEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
246-494 1.79e-40

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


:

Pssm-ID: 463686  Cd Length: 261  Bit Score: 147.98  E-value: 1.79e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  246 FPIVTEVIEAPEGnHLPQSILQPGKTIVIHKKYQASRILASEIRSNF--PKRHFLIPTSYKGKFKRRPRE--FPTAYDL- 320
Cdd:pfam12736   1 LPQVVKVTSGIYG-EGSVYCLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEELa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  321 ------EIAKSE-------------------------KEPLHVVATKAFHSPHDKLSSVSVGDqflvhqsettevlcegi 369
Cdd:pfam12736  80 rsfpirVLAKEEgpdsvgvpmfrssddmslanftlqaGEELTLLGVEESSGGKEELASVTVGD----------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  370 kkvvnVLACEKilKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVlAATPGLQLEED 449
Cdd:pfam12736 143 -----YLICLV--NQTGESVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPV 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 257743264  450 ITDSYLLISDFANPTECWEIPVG-RLNMTVQLVSNFSRDAEPFLVR 494
Cdd:pfam12736 215 YEEQAVVASPLLIPVPFRKLEVPiPSDLDVEVAEVTSADNKDYEEF 260
 
Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
3-230 7.71e-58

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 194.97  E-value: 7.71e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264    3 GNECCFSTGEVIKITGLK-VKKIIAEICEQiEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHI-------GP 74
Cdd:pfam12736  15 GSVYCLSKGDVLLIHGLKqAKKVVAQEVEE-GRGVVGPKLLIPLSYPGLFKLLADEGPFESVEELARSFPIrvlakeeGP 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264   75 SRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGE----------IMVSCAVarNHQTHSFNLPLSQEGEFYE-CED 143
Cdd:pfam12736  94 DSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGkeelasvtvgDYLICLV--NQTGESVLLPLSCRGRFSEeCED 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  144 ERIYTLKEIVE-WKIPKNRTRTVNLTDFSNKwdstnpfpKDFYGTLILKPVYEIQGVMK--------FRKDIIRILPSLD 214
Cdd:pfam12736 172 EGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEPVYEEQAVVAspllipvpFRKLEVPIPSDLD 243
                         250
                  ....*....|....*...
gi 257743264  215 VEVKDIT--DSYDANWFL 230
Cdd:pfam12736 244 VEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
246-494 1.79e-40

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 147.98  E-value: 1.79e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  246 FPIVTEVIEAPEGnHLPQSILQPGKTIVIHKKYQASRILASEIRSNF--PKRHFLIPTSYKGKFKRRPRE--FPTAYDL- 320
Cdd:pfam12736   1 LPQVVKVTSGIYG-EGSVYCLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEELa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  321 ------EIAKSE-------------------------KEPLHVVATKAFHSPHDKLSSVSVGDqflvhqsettevlcegi 369
Cdd:pfam12736  80 rsfpirVLAKEEgpdsvgvpmfrssddmslanftlqaGEELTLLGVEESSGGKEELASVTVGD----------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  370 kkvvnVLACEKilKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVlAATPGLQLEED 449
Cdd:pfam12736 143 -----YLICLV--NQTGESVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPV 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 257743264  450 ITDSYLLISDFANPTECWEIPVG-RLNMTVQLVSNFSRDAEPFLVR 494
Cdd:pfam12736 215 YEEQAVVASPLLIPVPFRKLEVPiPSDLDVEVAEVTSADNKDYEEF 260
 
Name Accession Description Interval E-value
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
3-230 7.71e-58

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 194.97  E-value: 7.71e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264    3 GNECCFSTGEVIKITGLK-VKKIIAEICEQiEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHI-------GP 74
Cdd:pfam12736  15 GSVYCLSKGDVLLIHGLKqAKKVVAQEVEE-GRGVVGPKLLIPLSYPGLFKLLADEGPFESVEELARSFPIrvlakeeGP 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264   75 SRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGE----------IMVSCAVarNHQTHSFNLPLSQEGEFYE-CED 143
Cdd:pfam12736  94 DSVGVPMFRSSDDMSLANFTLQAGEELTLLGVEESSGGkeelasvtvgDYLICLV--NQTGESVLLPLSCRGRFSEeCED 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  144 ERIYTLKEIVE-WKIPKNRTRTVNLTDFSNKwdstnpfpKDFYGTLILKPVYEIQGVMK--------FRKDIIRILPSLD 214
Cdd:pfam12736 172 EGEYTLREIVEkFKLPLNVKVVVGDPPRGDL--------DAFTGELRLEPVYEEQAVVAspllipvpFRKLEVPIPSDLD 243
                         250
                  ....*....|....*...
gi 257743264  215 VEVKDIT--DSYDANWFL 230
Cdd:pfam12736 244 VEVAEVTsaDNKDYEEFL 261
CABIT pfam12736
Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- ...
246-494 1.79e-40

Cell-cycle sustaining, positive selection,; The 'CABIT' domain (for 'cysteine-containing, all- in Themis') is found in a newly identified gene family that has three mammalian homologs (Themis, Icb1 and 9130404H23Rik) that encode proteins with two CABIT domains and a highly conserved proline-rich region. In contrast, Fam59A, Fam59B and related proteins from mammals to cnidarians, including the insect Serrano proteins, have a single copy of the CABIT domain, a proline-rich region and often a C-terminal SAM (sterile-motif) domain. Multiple-sequence alignment has predicted that the CABIT domain adopts an all-strand structure with at least 12 strands, ie a dyad of six-stranded beta-barrel units. The CABIT domain contains a nearly absolutely conserved cysteine residue which is likely to be central to its function. CABIT domain proteins function downstream of tyrosine kinase signalling and interact with GRB2.


Pssm-ID: 463686  Cd Length: 261  Bit Score: 147.98  E-value: 1.79e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  246 FPIVTEVIEAPEGnHLPQSILQPGKTIVIHKKYQASRILASEIRSNF--PKRHFLIPTSYKGKFKRRPRE--FPTAYDL- 320
Cdd:pfam12736   1 LPQVVKVTSGIYG-EGSVYCLSKGDVLLIHGLKQAKKVVAQEVEEGRgvVGPKLLIPLSYPGLFKLLADEgpFESVEELa 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  321 ------EIAKSE-------------------------KEPLHVVATKAFHSPHDKLSSVSVGDqflvhqsettevlcegi 369
Cdd:pfam12736  80 rsfpirVLAKEEgpdsvgvpmfrssddmslanftlqaGEELTLLGVEESSGGKEELASVTVGD----------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 257743264  370 kkvvnVLACEKilKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVlAATPGLQLEED 449
Cdd:pfam12736 143 -----YLICLV--NQTGESVLLPLSCRGRFSEECEDEGEYTLREIVEKFKLPLNVKVVVGDPPRGDLD-AFTGELRLEPV 214
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 257743264  450 ITDSYLLISDFANPTECWEIPVG-RLNMTVQLVSNFSRDAEPFLVR 494
Cdd:pfam12736 215 YEEQAVVASPLLIPVPFRKLEVPiPSDLDVEVAEVTSADNKDYEEF 260
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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