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Conserved domains on  [gi|254553285|ref|NP_001156949|]
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transmembrane protein 89 precursor [Rattus norvegicus]

Protein Classification

TMEM89 domain-containing protein( domain architecture ID 10633429)

TMEM89 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TMEM89 pfam15098
TMEM89 protein family; The function of this family of transmembrane proteins, TMEM89, has not, ...
 23-156 1.84e-90

TMEM89 protein family; The function of this family of transmembrane proteins, TMEM89, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are approximately 159 amino acids in length.


:

Pssm-ID: 434455  Cd Length: 134  Bit Score: 259.36  E-value: 1.84e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553285   23 WSRPLWYQVGLDLQPWGCQPNNLDNCRNSLGCPGYWMGLGGSRIYPVAGVTITTTMMLVISRVMLHRWRAKVAKGQLPQV 102
Cdd:pfam15098   1 WSRPLWYQVGLDLQPWGCQPNSLEGCGRSLGCPGYWMGLGTNRIYPVAGVTITTTMMLMISRVVLQRRRSQAAKGEHPQV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 254553285  103 TTNSCKHWKRQPTVSDRTLVLRVLHMLDAILLHIEGHLQRLASQQQIQIKGSPP 156
Cdd:pfam15098  81 TTDPCGPWKRRTPISDRALLLGVLHMLDALLVHIEGHLQRLATQQQIQIKGTPT 134
 
Name Accession Description Interval E-value
TMEM89 pfam15098
TMEM89 protein family; The function of this family of transmembrane proteins, TMEM89, has not, ...
 23-156 1.84e-90

TMEM89 protein family; The function of this family of transmembrane proteins, TMEM89, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are approximately 159 amino acids in length.


Pssm-ID: 434455  Cd Length: 134  Bit Score: 259.36  E-value: 1.84e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553285   23 WSRPLWYQVGLDLQPWGCQPNNLDNCRNSLGCPGYWMGLGGSRIYPVAGVTITTTMMLVISRVMLHRWRAKVAKGQLPQV 102
Cdd:pfam15098   1 WSRPLWYQVGLDLQPWGCQPNSLEGCGRSLGCPGYWMGLGTNRIYPVAGVTITTTMMLMISRVVLQRRRSQAAKGEHPQV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 254553285  103 TTNSCKHWKRQPTVSDRTLVLRVLHMLDAILLHIEGHLQRLASQQQIQIKGSPP 156
Cdd:pfam15098  81 TTDPCGPWKRRTPISDRALLLGVLHMLDALLVHIEGHLQRLATQQQIQIKGTPT 134
 
Name Accession Description Interval E-value
TMEM89 pfam15098
TMEM89 protein family; The function of this family of transmembrane proteins, TMEM89, has not, ...
 23-156 1.84e-90

TMEM89 protein family; The function of this family of transmembrane proteins, TMEM89, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are approximately 159 amino acids in length.


Pssm-ID: 434455  Cd Length: 134  Bit Score: 259.36  E-value: 1.84e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553285   23 WSRPLWYQVGLDLQPWGCQPNNLDNCRNSLGCPGYWMGLGGSRIYPVAGVTITTTMMLVISRVMLHRWRAKVAKGQLPQV 102
Cdd:pfam15098   1 WSRPLWYQVGLDLQPWGCQPNSLEGCGRSLGCPGYWMGLGTNRIYPVAGVTITTTMMLMISRVVLQRRRSQAAKGEHPQV 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 254553285  103 TTNSCKHWKRQPTVSDRTLVLRVLHMLDAILLHIEGHLQRLASQQQIQIKGSPP 156
Cdd:pfam15098  81 TTDPCGPWKRRTPISDRALLLGVLHMLDALLVHIEGHLQRLATQQQIQIKGTPT 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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