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Conserved domains on  [gi|157821967|ref|NP_001101123|]
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membrane-associated transporter protein [Rattus norvegicus]

Protein Classification

SLC45 family MFS transporter( domain architecture ID 13022743)

SLC45 (solute carrier 45) family major facilitator superfamily (MFS) transporter facilitates the transport of sugars such as sucrose, glucose, and maltose into the cell, with the concomitant uptake of protons (symport system)

CATH:  1.20.1250.20
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
35-521 3.20e-142

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 416.26  E-value: 3.20e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  35 LVMHSMAMFGREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGVMML 114
Cdd:cd17313    1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 115 LGMALYLNGDAAVSALVANPRqklVWAISITMIGVVLFDFSADFIDGPIKAYLFDVCSHQDKEKGLHYHALFTGFGGALG 194
Cdd:cd17313   81 LGLILIPNAADIGLALGDGPR---TWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQRSKANGIINFMGGLGGVLG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 195 YLLGAIDWMHLELGKLLGTEFQVMFFFSALVLTLCFITHLCSIPEDPLRddatdpplqpdpqgsslsadgmprygsiekv 274
Cdd:cd17313  158 YLLGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLS------------------------------- 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 275 kngdadtglPVQGGKNKKPSGQsqrtMSMKSLLRALVNMPSHYRCLCISHLIGWTAFLSNMLFFTDFMGQIVYHGdpyga 354
Cdd:cd17313  207 ---------PEAGEHSENPSLG----EVLKSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG----- 268
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 355 hNSTEFLIYERGVEVGCWGLCINSVFSSVYSYFQKVMVSYIGLKGLYFMGYLLFGLGTGFIGLFPNVYSTLVLCSMFGVM 434
Cdd:cd17313  269 -TSAASSHYGAGVRMGAWGLLIFSLAFLIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIG 347
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 435 SSTLYTVPFNLIAEYHreeekekqqevpggpDNHGRGKGVDCAALTCMVQLAQILVGGGLGFL--VNMAGSVVVVVITAS 512
Cdd:cd17313  348 WATININPYPLVSDYH---------------SESGRGQGTDTGLLNLAISLAQILVSLLAGPIidVKGYGTVFPVAAVAS 412

                 ....*....
gi 157821967 513 AVALIGCCF 521
Cdd:cd17313  413 FLSLVGALF 421
 
Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
35-521 3.20e-142

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 416.26  E-value: 3.20e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  35 LVMHSMAMFGREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGVMML 114
Cdd:cd17313    1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 115 LGMALYLNGDAAVSALVANPRqklVWAISITMIGVVLFDFSADFIDGPIKAYLFDVCSHQDKEKGLHYHALFTGFGGALG 194
Cdd:cd17313   81 LGLILIPNAADIGLALGDGPR---TWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQRSKANGIINFMGGLGGVLG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 195 YLLGAIDWMHLELGKLLGTEFQVMFFFSALVLTLCFITHLCSIPEDPLRddatdpplqpdpqgsslsadgmprygsiekv 274
Cdd:cd17313  158 YLLGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLS------------------------------- 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 275 kngdadtglPVQGGKNKKPSGQsqrtMSMKSLLRALVNMPSHYRCLCISHLIGWTAFLSNMLFFTDFMGQIVYHGdpyga 354
Cdd:cd17313  207 ---------PEAGEHSENPSLG----EVLKSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG----- 268
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 355 hNSTEFLIYERGVEVGCWGLCINSVFSSVYSYFQKVMVSYIGLKGLYFMGYLLFGLGTGFIGLFPNVYSTLVLCSMFGVM 434
Cdd:cd17313  269 -TSAASSHYGAGVRMGAWGLLIFSLAFLIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIG 347
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 435 SSTLYTVPFNLIAEYHreeekekqqevpggpDNHGRGKGVDCAALTCMVQLAQILVGGGLGFL--VNMAGSVVVVVITAS 512
Cdd:cd17313  348 WATININPYPLVSDYH---------------SESGRGQGTDTGLLNLAISLAQILVSLLAGPIidVKGYGTVFPVAAVAS 412

                 ....*....
gi 157821967 513 AVALIGCCF 521
Cdd:cd17313  413 FLSLVGALF 421
GPH_sucrose TIGR01301
GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in ...
44-495 2.49e-25

GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.


Pssm-ID: 273545 [Multi-domain]  Cd Length: 477  Bit Score: 109.12  E-value: 2.49e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967   44 GREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGVmmLLGMALYLNG 123
Cdd:TIGR01301  15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA--LVAFAVILIG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  124 DAA-VSALVANPRQKLV--WAISITMIGVVLFDFSADFIDGPIKAYLFDVCSHQDKEK--GLHYHALFTGFGGALGYLLG 198
Cdd:TIGR01301  93 FAAdIGHLFGDNLDKKTkpRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTriANAYFSFFMAIGNVLGYAAG 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  199 AIDWMH--LELGKLLGTEFQVMFFFSALVLTLCFITHLCSIpedplrddatdpplqpdpqgSSLSADGMPRYGSIEKVKN 276
Cdd:TIGR01301 173 AYSGLYkiFPFTKTEACGVSCANLKSCFLIDIILLAILTYI--------------------ALSAVKENPLIGSDDFINS 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  277 GDAdtglpvqggknkkPSGQSQRTMSMKSLLRALVNMPSHYRCLCISHLIGWTAFLSNMLFFTDFMGQIVYHGDPYGAHn 356
Cdd:TIGR01301 233 EAA-------------PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA- 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  357 steflIYERGVEVGCWGLCINSVFSSVYSYFQKVM----------------VSYIGLKGLYFMGYLL----FGLGTGFIG 416
Cdd:TIGR01301 299 -----KYDDGVRAGAFGLMLNSVVLGITSIGMEKLcrgwgagkrlwgivniILAICLAATVLVTYVAknsrYYDGDGESL 373
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  417 LFPN--VYSTLVLCSMFGVMSSTLYTVPFNLIAEYhreeekekqqevpggPDNHGRGKGVDCAALTCMVQLAQILVGGGL 494
Cdd:TIGR01301 374 PPPTgiKASALIVFAILGIPLAITYSIPFALASIR---------------SSNLGAGQGLSMGVLNLAIVIPQIIVSLGS 438

                  .
gi 157821967  495 G 495
Cdd:TIGR01301 439 G 439
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
24-524 3.94e-24

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 104.98  E-value: 3.94e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  24 SAEQPKRSTGRLVMHSMAMFGREFCYAVEAAYVTPVLLSV-GLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRR 102
Cdd:COG2211    1 TAAKKKLSLKEKLAYGLGDLGLNLAFGLLSAYLLYFYTDVlGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 103 RPYILTLGVMMLLGMALylngdaAVSALVANPRQKLVWAIsitmIGVVLFDFSADFIDGPIKAYLFD-VCSHQDKEKGLH 181
Cdd:COG2211   81 RPWILIGAIPLALSFVL------LFTAPDLSPTGKLIYAL----VTYLLLGLAYTLVNIPYSALGAElTPDYEERTRLSS 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 182 YHALFTGFGGALGYLLGAIdwMHLELGKLLGTEFQVMFFFSALVLTLCFITHLCSIPEDPLRDDATDPPLQpdpqgssls 261
Cdd:COG2211  151 WRFAFAGLGGLLASVLPPP--LVAAFGGDAALGYRLTALIFAVLGLLAFLLTFFGTKERPVPEEEKVSLKE--------- 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 262 adgmprygsiekvkngdadtglpvqggknkkpsgqsqrtmSMKSLLRalvnmPSHYRCLCISHLIGWTAFLSNMLFFtdf 341
Cdd:COG2211  220 ----------------------------------------SLKALLK-----NRPFLLLLLAYLLFFLALALVAALL--- 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 342 mgqivyhgdPYgahnsteFLIYERGVEVGCWGLC--INSVFSSVYSYFQKVMVSYIGLKGLYFMGYLLFGLGTGFIGLFP 419
Cdd:COG2211  252 ---------LY-------YFKYVLGLSAALVGLLlaLYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLG 315
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 420 --NVYSTLVLCSMFGVMSSTLYTVPFNLIAEyhreeekekqqEVPGGPDNHG-RGKGVDCAALTCMVQLAQILVGGGLGF 496
Cdd:COG2211  316 pgNLWLLLVLAALAGIGLGAILVLPWAMLAD-----------VVDYDEWKTGrRREGLYFGIFTFAIKLGQALAGALAGL 384
                        490       500
                 ....*....|....*....|....*...
gi 157821967 497 LVNMAGSVVVVVITASAVALIGCCFVAL 524
Cdd:COG2211  385 LLALFGYVAGAAQSPSALTGIRLLFFLL 412
MFS_2 pfam13347
MFS/sugar transport protein; This family is part of the major facilitator superfamily of ...
37-249 2.73e-05

MFS/sugar transport protein; This family is part of the major facilitator superfamily of membrane transport proteins.


Pssm-ID: 433134 [Multi-domain]  Cd Length: 427  Bit Score: 46.53  E-value: 2.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967   37 MHSMAMFGREFCYAVEAAYVTPVLLSV-GLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGV-MML 114
Cdd:pfam13347   1 GYGSGALAAGIKYAGLATYLLYFYTDVlGLSAAAVGLVLLVARLVDAFTDPIVGHIIDRTRTRWGRRRPWLLLSAIiLAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  115 LGMALYLNGDAAVSALvanprqkLVWAISITMIGVVLFDFsadfidgpikaylFDVCSH----------QDKEKGLHYHA 184
Cdd:pfam13347  81 SFILLFTPPELGRAPL-------FIWLLATYILLRIAYTF-------------FEIPYWslgpeltrdyDERTSLTSYRS 140
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157821967  185 LFTGFGGALGYLLGAIDWMHLELGKLLGTEFQVM-FFFSALVLTLCFITHLCSIPEDPLRDDATDP 249
Cdd:pfam13347 141 FFSVGGGLLAAALAFPLVLILGGTGLERKGYRIFaLIGAVLMLLGVIITAAGTKERVSMRSKEDTG 206
 
Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
35-521 3.20e-142

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 416.26  E-value: 3.20e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  35 LVMHSMAMFGREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGVMML 114
Cdd:cd17313    1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 115 LGMALYLNGDAAVSALVANPRqklVWAISITMIGVVLFDFSADFIDGPIKAYLFDVCSHQDKEKGLHYHALFTGFGGALG 194
Cdd:cd17313   81 LGLILIPNAADIGLALGDGPR---TWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQRSKANGIINFMGGLGGVLG 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 195 YLLGAIDWMHLELGKLLGTEFQVMFFFSALVLTLCFITHLCSIPEDPLRddatdpplqpdpqgsslsadgmprygsiekv 274
Cdd:cd17313  158 YLLGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLS------------------------------- 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 275 kngdadtglPVQGGKNKKPSGQsqrtMSMKSLLRALVNMPSHYRCLCISHLIGWTAFLSNMLFFTDFMGQIVYHGdpyga 354
Cdd:cd17313  207 ---------PEAGEHSENPSLG----EVLKSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG----- 268
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 355 hNSTEFLIYERGVEVGCWGLCINSVFSSVYSYFQKVMVSYIGLKGLYFMGYLLFGLGTGFIGLFPNVYSTLVLCSMFGVM 434
Cdd:cd17313  269 -TSAASSHYGAGVRMGAWGLLIFSLAFLIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIG 347
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 435 SSTLYTVPFNLIAEYHreeekekqqevpggpDNHGRGKGVDCAALTCMVQLAQILVGGGLGFL--VNMAGSVVVVVITAS 512
Cdd:cd17313  348 WATININPYPLVSDYH---------------SESGRGQGTDTGLLNLAISLAQILVSLLAGPIidVKGYGTVFPVAAVAS 412

                 ....*....
gi 157821967 513 AVALIGCCF 521
Cdd:cd17313  413 FLSLVGALF 421
GPH_sucrose TIGR01301
GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in ...
44-495 2.49e-25

GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.


Pssm-ID: 273545 [Multi-domain]  Cd Length: 477  Bit Score: 109.12  E-value: 2.49e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967   44 GREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGVmmLLGMALYLNG 123
Cdd:TIGR01301  15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA--LVAFAVILIG 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  124 DAA-VSALVANPRQKLV--WAISITMIGVVLFDFSADFIDGPIKAYLFDVCSHQDKEK--GLHYHALFTGFGGALGYLLG 198
Cdd:TIGR01301  93 FAAdIGHLFGDNLDKKTkpRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTriANAYFSFFMAIGNVLGYAAG 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  199 AIDWMH--LELGKLLGTEFQVMFFFSALVLTLCFITHLCSIpedplrddatdpplqpdpqgSSLSADGMPRYGSIEKVKN 276
Cdd:TIGR01301 173 AYSGLYkiFPFTKTEACGVSCANLKSCFLIDIILLAILTYI--------------------ALSAVKENPLIGSDDFINS 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  277 GDAdtglpvqggknkkPSGQSQRTMSMKSLLRALVNMPSHYRCLCISHLIGWTAFLSNMLFFTDFMGQIVYHGDPYGAHn 356
Cdd:TIGR01301 233 EAA-------------PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA- 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  357 steflIYERGVEVGCWGLCINSVFSSVYSYFQKVM----------------VSYIGLKGLYFMGYLL----FGLGTGFIG 416
Cdd:TIGR01301 299 -----KYDDGVRAGAFGLMLNSVVLGITSIGMEKLcrgwgagkrlwgivniILAICLAATVLVTYVAknsrYYDGDGESL 373
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  417 LFPN--VYSTLVLCSMFGVMSSTLYTVPFNLIAEYhreeekekqqevpggPDNHGRGKGVDCAALTCMVQLAQILVGGGL 494
Cdd:TIGR01301 374 PPPTgiKASALIVFAILGIPLAITYSIPFALASIR---------------SSNLGAGQGLSMGVLNLAIVIPQIIVSLGS 438

                  .
gi 157821967  495 G 495
Cdd:TIGR01301 439 G 439
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
24-524 3.94e-24

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 104.98  E-value: 3.94e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  24 SAEQPKRSTGRLVMHSMAMFGREFCYAVEAAYVTPVLLSV-GLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRR 102
Cdd:COG2211    1 TAAKKKLSLKEKLAYGLGDLGLNLAFGLLSAYLLYFYTDVlGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 103 RPYILTLGVMMLLGMALylngdaAVSALVANPRQKLVWAIsitmIGVVLFDFSADFIDGPIKAYLFD-VCSHQDKEKGLH 181
Cdd:COG2211   81 RPWILIGAIPLALSFVL------LFTAPDLSPTGKLIYAL----VTYLLLGLAYTLVNIPYSALGAElTPDYEERTRLSS 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 182 YHALFTGFGGALGYLLGAIdwMHLELGKLLGTEFQVMFFFSALVLTLCFITHLCSIPEDPLRDDATDPPLQpdpqgssls 261
Cdd:COG2211  151 WRFAFAGLGGLLASVLPPP--LVAAFGGDAALGYRLTALIFAVLGLLAFLLTFFGTKERPVPEEEKVSLKE--------- 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 262 adgmprygsiekvkngdadtglpvqggknkkpsgqsqrtmSMKSLLRalvnmPSHYRCLCISHLIGWTAFLSNMLFFtdf 341
Cdd:COG2211  220 ----------------------------------------SLKALLK-----NRPFLLLLLAYLLFFLALALVAALL--- 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 342 mgqivyhgdPYgahnsteFLIYERGVEVGCWGLC--INSVFSSVYSYFQKVMVSYIGLKGLYFMGYLLFGLGTGFIGLFP 419
Cdd:COG2211  252 ---------LY-------YFKYVLGLSAALVGLLlaLYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLG 315
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 420 --NVYSTLVLCSMFGVMSSTLYTVPFNLIAEyhreeekekqqEVPGGPDNHG-RGKGVDCAALTCMVQLAQILVGGGLGF 496
Cdd:COG2211  316 pgNLWLLLVLAALAGIGLGAILVLPWAMLAD-----------VVDYDEWKTGrRREGLYFGIFTFAIKLGQALAGALAGL 384
                        490       500
                 ....*....|....*....|....*...
gi 157821967 497 LVNMAGSVVVVVITASAVALIGCCFVAL 524
Cdd:COG2211  385 LLALFGYVAGAAQSPSALTGIRLLFFLL 412
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
39-521 1.37e-21

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 96.73  E-value: 1.37e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  39 SMAMFGREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDhcraRWGRRRpyiltlgvMMLLGMA 118
Cdd:cd06174    2 LLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLAD----RFGRRP--------VLLLGLL 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 119 LYlngdAAVSALVAnprqkLVWAISITMIGVVLFDFSADFIDGPIKAYLFDVCSHQDKEKGLHYHALFTGFGGALGYLLG 198
Cdd:cd06174   70 LF----ALGALLFA-----FAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLG 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 199 AIDWMHLELGkllgteFQVMFFFSALVLTLCFITHLCSIPEDPLRDDATDPPLQPdpqgsslsadgmprygsiekvkngd 278
Cdd:cd06174  141 GILASSLGFG------WRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASS------------------------- 189
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 279 adtglpvqggknkkpsgqsqrTMSMKSLLRALVNmpSHYRCLCISHLIGWTAFLSNMLFFTDFMGQIVYhgdpygahnst 358
Cdd:cd06174  190 ---------------------KSVLKLLKRVLKN--PGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGG----------- 235
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 359 efliyeRGVEVGCWGLCINSVFSSVYSYFQKVMVSY-IGLKGLYFMGYLLFGLGTGFIGLFPNVYSTLVLCSMFGVMSST 437
Cdd:cd06174  236 ------LSVAVAGLLLSLFGLAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGG 309
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 438 LYTVPFNLIAEYHREeekekqqevpggpdnhgRGKGVDCAALTCMVQLAQILVGGGLGFLVNMAGSVVVVVITASAVALI 517
Cdd:cd06174  310 LLPLSFALIAELFPP-----------------EIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLL 372

                 ....
gi 157821967 518 GCCF 521
Cdd:cd06174  373 AAIL 376
MFS_2 pfam13347
MFS/sugar transport protein; This family is part of the major facilitator superfamily of ...
37-249 2.73e-05

MFS/sugar transport protein; This family is part of the major facilitator superfamily of membrane transport proteins.


Pssm-ID: 433134 [Multi-domain]  Cd Length: 427  Bit Score: 46.53  E-value: 2.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967   37 MHSMAMFGREFCYAVEAAYVTPVLLSV-GLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGV-MML 114
Cdd:pfam13347   1 GYGSGALAAGIKYAGLATYLLYFYTDVlGLSAAAVGLVLLVARLVDAFTDPIVGHIIDRTRTRWGRRRPWLLLSAIiLAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  115 LGMALYLNGDAAVSALvanprqkLVWAISITMIGVVLFDFsadfidgpikaylFDVCSH----------QDKEKGLHYHA 184
Cdd:pfam13347  81 SFILLFTPPELGRAPL-------FIWLLATYILLRIAYTF-------------FEIPYWslgpeltrdyDERTSLTSYRS 140
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157821967  185 LFTGFGGALGYLLGAIDWMHLELGKLLGTEFQVM-FFFSALVLTLCFITHLCSIPEDPLRDDATDP 249
Cdd:pfam13347 141 FFSVGGGLLAAALAFPLVLILGGTGLERKGYRIFaLIGAVLMLLGVIITAAGTKERVSMRSKEDTG 206
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
55-448 1.62e-04

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 44.13  E-value: 1.62e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  55 YVTPVLlsvGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLGV-MMLLGMALYLNGDAAVSAlvan 133
Cdd:cd17332   25 FYTDVL---GLSAAAAGTIFLVARIIDAINDPLMGYLIDRTRSRWGRFRPWLLWGAIpLALLFVLLFTTPDGSGTG---- 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 134 prqKLVWAISITMigvvLFDFSADFIDGPIKAyLFDVCSHQDKEKglhyhALFTG---FGGALGYLLGAIdwMHLELGKL 210
Cdd:cd17332   98 ---KLIYALITYI----LLDLLYTLVNIPYTA-LIPELTDDPEER-----TSLTSwrmFFATIGGLLVTV--LPPPLVAY 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 211 LGTE------FQVMFFFSALVLTLCFITHLCSIPEDPlrddatdpplqpdpqgsslsadgmprygsiekvkngdadtglp 284
Cdd:cd17332  163 FGGGnasrgyFLTALIIGIIGIILLLICFFGTRERVV------------------------------------------- 199
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 285 vqggknkkPSGQSQRTMSMKSLLRALVNMPSHyRCLCISHLIGWTAF---LSNMLFFTDFmgqiVYHGDPYGahnsteFL 361
Cdd:cd17332  200 --------PPEEEKSKLPLLKSLKALLKNRPF-LILLLAYLLYFLAFnivNTVLVYYFKY----VLGGRAEL------VL 260
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 362 IyergveVGCWGLCINSVFSSVYSYFQKvmvsyIGLKGLYFMGYLLFGLGTG--FIGLFPNVYSTLVLCSMFGVMSSTLY 439
Cdd:cd17332  261 L------LLLILSGALLALLPWPPLKKR-----FGKKKAFFIGLLLAILGLLllFFLPPGNLVLILVLAVLAGIGYGGAN 329

                 ....*....
gi 157821967 440 TVPFNLIAE 448
Cdd:cd17332  330 LLPWAMLAD 338
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
68-200 6.82e-03

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 38.98  E-value: 6.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967  68 SLYSMVWLLSPILGFLLQPVVGSASDHCrarwGRRRPYIL---TLGVMMLLGMALYLNGDaavsalvanprqkLVWAISI 144
Cdd:COG2270   52 ALWGYALAIAGLLVALLAPVLGAIADRS----GRKKPFLAfftLLGVLATAALFFVAPGG-------------LWLGLLL 114
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 157821967 145 TMIGVVLFDFSADFIDgpikAYLFDVCSHQDKEKGlhyhalfTGFGGALGYLLGAI 200
Cdd:COG2270  115 FVLANIGFEGSLVFYN----AFLPDIATPEEIGRV-------SGLGWALGYLGGVL 159
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
325-525 7.02e-03

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 38.71  E-value: 7.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 325 LIGWTAFLSNMLFFTdfmgQIVYHGdpygahnsteFLIYERGV----EVGcWGLCINSVFSSVYSYFQKVMVSYIGLKGL 400
Cdd:cd17473  201 PIYFLAFLAMLLFYV----IPIQLP----------FLLQERGGgsaaLIG-LALAIASLAGAIGALLFGRLKRRLGKRRL 265
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157821967 401 YFMGYLLFGLGTGFIGLFPNVYSTLVLCSMFGVMSSTLYTVPFNLIAEyhreeekekqqEVPggPDNHGRGkgvdCAALT 480
Cdd:cd17473  266 LAIGFALMALGFLLLALASGLWVVLLGAILAGLGFGLLLPTLNSWAMS-----------LVP--PELRGRA----MGIVT 328
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 157821967 481 CMVQLAQILVGGGLGFLVNMAGSVVVVVITASAVALIGCCFVALF 525
Cdd:cd17473  329 SAFFLGQFLSPLVLGPLVNLTGGLSGAFLILGVLALVLAIVLLLL 373
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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