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Conserved domains on  [gi|62857827|ref|NP_001017250|]
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NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Xenopus tropicalis]

Protein Classification

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10( domain architecture ID 10563015)

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 is an accessory subunit that is involved in the functional assembly of the mitochondrial respiratory chain complex I

Gene Symbol:  NDUFB10
Gene Ontology:  GO:0005747|GO:0032981
PubMed:  7003824

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NDUFB10 pfam10249
NADH-ubiquinone oxidoreductase subunit 10; NDUFB10 is a family of conserved proteins of up to ...
 42-168 9.75e-66

NADH-ubiquinone oxidoreductase subunit 10; NDUFB10 is a family of conserved proteins of up to 180 residues. It is one of the 41 protein subunits within the hydrophobic fraction of the NADH:ubiquinone oxidoreductase (complex I), a multiprotein complex located in the inner mitochondrial membrane whose main function is the transport of electrons from NADH to ubiquinone, which is accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. NDUFB10 is encoded in the nucleus.


:

Pssm-ID: 431170  Cd Length: 126  Bit Score: 197.07  E-value: 9.75e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62857827    42 DVPVTQFHD-WVERqrSRNTYYYYHRQYRRVPDLTECEVGDYLCYFEAEMQWKRDHKVDQEIVKILQERMRACQQREGHS 120
Cdd:pfam10249   1 DKPVTWFREkIVEP--NRKKYYYYHQKFRRVPTIDECYTDDYVCYYEANMQWKRDKLVDQEILKILRQRLEDCQQYEGPD 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 62857827   121 YVQNCAKEVAQFTEAAKGYQSRYGDLGAYGNARKCLMKQKHRMIAERK 168
Cdd:pfam10249  79 YVQNCAKLKKQYEEAATNYFIKYGDLGAYGNARKAYMKQKHRMIWERR 126
 
Name Accession Description Interval E-value
NDUFB10 pfam10249
NADH-ubiquinone oxidoreductase subunit 10; NDUFB10 is a family of conserved proteins of up to ...
 42-168 9.75e-66

NADH-ubiquinone oxidoreductase subunit 10; NDUFB10 is a family of conserved proteins of up to 180 residues. It is one of the 41 protein subunits within the hydrophobic fraction of the NADH:ubiquinone oxidoreductase (complex I), a multiprotein complex located in the inner mitochondrial membrane whose main function is the transport of electrons from NADH to ubiquinone, which is accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. NDUFB10 is encoded in the nucleus.


Pssm-ID: 431170  Cd Length: 126  Bit Score: 197.07  E-value: 9.75e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62857827    42 DVPVTQFHD-WVERqrSRNTYYYYHRQYRRVPDLTECEVGDYLCYFEAEMQWKRDHKVDQEIVKILQERMRACQQREGHS 120
Cdd:pfam10249   1 DKPVTWFREkIVEP--NRKKYYYYHQKFRRVPTIDECYTDDYVCYYEANMQWKRDKLVDQEILKILRQRLEDCQQYEGPD 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 62857827   121 YVQNCAKEVAQFTEAAKGYQSRYGDLGAYGNARKCLMKQKHRMIAERK 168
Cdd:pfam10249  79 YVQNCAKLKKQYEEAATNYFIKYGDLGAYGNARKAYMKQKHRMIWERR 126
 
Name Accession Description Interval E-value
NDUFB10 pfam10249
NADH-ubiquinone oxidoreductase subunit 10; NDUFB10 is a family of conserved proteins of up to ...
 42-168 9.75e-66

NADH-ubiquinone oxidoreductase subunit 10; NDUFB10 is a family of conserved proteins of up to 180 residues. It is one of the 41 protein subunits within the hydrophobic fraction of the NADH:ubiquinone oxidoreductase (complex I), a multiprotein complex located in the inner mitochondrial membrane whose main function is the transport of electrons from NADH to ubiquinone, which is accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. NDUFB10 is encoded in the nucleus.


Pssm-ID: 431170  Cd Length: 126  Bit Score: 197.07  E-value: 9.75e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62857827    42 DVPVTQFHD-WVERqrSRNTYYYYHRQYRRVPDLTECEVGDYLCYFEAEMQWKRDHKVDQEIVKILQERMRACQQREGHS 120
Cdd:pfam10249   1 DKPVTWFREkIVEP--NRKKYYYYHQKFRRVPTIDECYTDDYVCYYEANMQWKRDKLVDQEILKILRQRLEDCQQYEGPD 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 62857827   121 YVQNCAKEVAQFTEAAKGYQSRYGDLGAYGNARKCLMKQKHRMIAERK 168
Cdd:pfam10249  79 YVQNCAKLKKQYEEAATNYFIKYGDLGAYGNARKAYMKQKHRMIWERR 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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