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Conserved domains on  [gi|62079139|ref|NP_001014228|]
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ester hydrolase C11orf54 homolog [Rattus norvegicus]

Protein Classification

PTD012 family protein( domain architecture ID 13022627)

PTD012 family protein similar to Homo sapiens PTD012 (also called ester hydrolase C11orf54), a zinc-containing hydrolase fold protein which exhibits ester hydrolase activity on the substrate p-nitrophenyl acetate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF1907 cd17298
proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain ...
14-304 0e+00

proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion, and an acetate anion at a site that may support the enzymatic activity of a ester. In vitro hydrolytic activity towards para-nitrophenylacetate for the human enzyme was reported. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


:

Pssm-ID: 341210  Cd Length: 287  Bit Score: 520.51  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  14 EELAEVLQKGLKDNFAHVQVSVVDCPDLTKEPFTFPVKGICGQTRIAEVGGVPYLLPLVNKKKVYDLNEIAKEIKLPGAF 93
Cdd:cd17298   1 EELAAVLQDGLKKNFEEVSVSVVDCPDLTQEPFNLAAPGLCGSPRIADVGGVPYLLPLPQLDKVYDLKDIAKLMGLPDGF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  94 ILGAGAGPFQTLGFNSEFMPIVQTASEHHqPVNGSYFARANPADGKCLLEKYSQKYPDfgCALLANLFASEGQPGKVIEV 173
Cdd:cd17298  81 IIGAGAGPFPVVGVNCELMPNLSISGGGV-VTNGSRIAKVDPDNGSCELEKLPDSETR--FALLGNLFASEGKPGKVLKV 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139 174 QAKKRTGEHNFVSCMRQTLEKHYGDKPVGMGGTFLVQKGKVKAHIMPaEFSSCSLNSDEAVNQWLNFYEMKAPLVCLPVF 253
Cdd:cd17298 158 KAKKRTGEDNFITCIRKALAEHYGDKPVGLGGVFLIKKGKAKLHVMP-DFSKTPLNSDEDVNNWLKFFEMSAPLVCLGVL 236
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 62079139 254 VSKDPGLDLRLEHTHFFSHHGEGGHYHYDTTPDTVEYLGYFSPAQFLYRID 304
Cdd:cd17298 237 VSHDPGLDLRLEHTHCFSDHGEGGHYHYDTTPDTVEYEGYFNVAEKLYRID 287
 
Name Accession Description Interval E-value
DUF1907 cd17298
proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain ...
14-304 0e+00

proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion, and an acetate anion at a site that may support the enzymatic activity of a ester. In vitro hydrolytic activity towards para-nitrophenylacetate for the human enzyme was reported. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


Pssm-ID: 341210  Cd Length: 287  Bit Score: 520.51  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  14 EELAEVLQKGLKDNFAHVQVSVVDCPDLTKEPFTFPVKGICGQTRIAEVGGVPYLLPLVNKKKVYDLNEIAKEIKLPGAF 93
Cdd:cd17298   1 EELAAVLQDGLKKNFEEVSVSVVDCPDLTQEPFNLAAPGLCGSPRIADVGGVPYLLPLPQLDKVYDLKDIAKLMGLPDGF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  94 ILGAGAGPFQTLGFNSEFMPIVQTASEHHqPVNGSYFARANPADGKCLLEKYSQKYPDfgCALLANLFASEGQPGKVIEV 173
Cdd:cd17298  81 IIGAGAGPFPVVGVNCELMPNLSISGGGV-VTNGSRIAKVDPDNGSCELEKLPDSETR--FALLGNLFASEGKPGKVLKV 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139 174 QAKKRTGEHNFVSCMRQTLEKHYGDKPVGMGGTFLVQKGKVKAHIMPaEFSSCSLNSDEAVNQWLNFYEMKAPLVCLPVF 253
Cdd:cd17298 158 KAKKRTGEDNFITCIRKALAEHYGDKPVGLGGVFLIKKGKAKLHVMP-DFSKTPLNSDEDVNNWLKFFEMSAPLVCLGVL 236
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 62079139 254 VSKDPGLDLRLEHTHFFSHHGEGGHYHYDTTPDTVEYLGYFSPAQFLYRID 304
Cdd:cd17298 237 VSHDPGLDLRLEHTHCFSDHGEGGHYHYDTTPDTVEYEGYFNVAEKLYRID 287
DUF1907 pfam08925
Domain of Unknown Function (DUF1907); The structure of this domain displays an ...
21-303 0e+00

Domain of Unknown Function (DUF1907); The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif that coordinates a zinc ion, and an acetate anion at a site that likely supports the enzymatic activity of an ester hydrolase.


Pssm-ID: 462636  Cd Length: 281  Bit Score: 503.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139    21 QKGLKDNFAHVQVSVVDCPDLTKEPFTFPVKGICGQTRIAEVGGVPYLLPLVNKKKVYDLNEIAKEIKLPGAFILGAGAG 100
Cdd:pfam08925   1 QDGLTSNFEHVSVSVVDCPDLRQAPFHLAAEGLCGNPRIADVGGPPYLLPLPRLDKLYDLIDIAKRMGLPGGFIIGAGAG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139   101 PFQTLGFNSEFMPIVQTASEHHQPVNGSYFARANPADGKCLLEKYSQKyPDFGCALLANLFASEGQPGKVIEVQAKKRTG 180
Cdd:pfam08925  81 PFPVVGVNCELIPNLSWQGDGKNVVNGSRIAKVNPEDGSCCLLEYPNS-EDCRFALLANLFGSEGKPGKVLKVVAKKRTG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139   181 EHNFVSCMRQTLEKHYGDKPVGMGGTFLVQKGKVKAHIMPaEFSSCSLNSDEAVNQWLNFYEMKAPLVCLPVFVSKDPGL 260
Cdd:pfam08925 160 DKSFTTCIRKALAKHYGDKPVGLGGVFLIKNGKAKFHVMP-DFSKTPLKTEEDVNNWLKFFEMSAPLVCLGVLVSHDPGL 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 62079139   261 DLRLEHTHFFSHHGEGGHYHYDTTPDTVEYLGYFSPAQFLYRI 303
Cdd:pfam08925 239 DLRLEHTHCFSHHGEGGHYHYDTTPETVEYEGYFNPAKKLYRI 281
 
Name Accession Description Interval E-value
DUF1907 cd17298
proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain ...
14-304 0e+00

proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion, and an acetate anion at a site that may support the enzymatic activity of a ester. In vitro hydrolytic activity towards para-nitrophenylacetate for the human enzyme was reported. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


Pssm-ID: 341210  Cd Length: 287  Bit Score: 520.51  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  14 EELAEVLQKGLKDNFAHVQVSVVDCPDLTKEPFTFPVKGICGQTRIAEVGGVPYLLPLVNKKKVYDLNEIAKEIKLPGAF 93
Cdd:cd17298   1 EELAAVLQDGLKKNFEEVSVSVVDCPDLTQEPFNLAAPGLCGSPRIADVGGVPYLLPLPQLDKVYDLKDIAKLMGLPDGF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  94 ILGAGAGPFQTLGFNSEFMPIVQTASEHHqPVNGSYFARANPADGKCLLEKYSQKYPDfgCALLANLFASEGQPGKVIEV 173
Cdd:cd17298  81 IIGAGAGPFPVVGVNCELMPNLSISGGGV-VTNGSRIAKVDPDNGSCELEKLPDSETR--FALLGNLFASEGKPGKVLKV 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139 174 QAKKRTGEHNFVSCMRQTLEKHYGDKPVGMGGTFLVQKGKVKAHIMPaEFSSCSLNSDEAVNQWLNFYEMKAPLVCLPVF 253
Cdd:cd17298 158 KAKKRTGEDNFITCIRKALAEHYGDKPVGLGGVFLIKKGKAKLHVMP-DFSKTPLNSDEDVNNWLKFFEMSAPLVCLGVL 236
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 62079139 254 VSKDPGLDLRLEHTHFFSHHGEGGHYHYDTTPDTVEYLGYFSPAQFLYRID 304
Cdd:cd17298 237 VSHDPGLDLRLEHTHCFSDHGEGGHYHYDTTPDTVEYEGYFNVAEKLYRID 287
DUF1907 pfam08925
Domain of Unknown Function (DUF1907); The structure of this domain displays an ...
21-303 0e+00

Domain of Unknown Function (DUF1907); The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif that coordinates a zinc ion, and an acetate anion at a site that likely supports the enzymatic activity of an ester hydrolase.


Pssm-ID: 462636  Cd Length: 281  Bit Score: 503.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139    21 QKGLKDNFAHVQVSVVDCPDLTKEPFTFPVKGICGQTRIAEVGGVPYLLPLVNKKKVYDLNEIAKEIKLPGAFILGAGAG 100
Cdd:pfam08925   1 QDGLTSNFEHVSVSVVDCPDLRQAPFHLAAEGLCGNPRIADVGGPPYLLPLPRLDKLYDLIDIAKRMGLPGGFIIGAGAG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139   101 PFQTLGFNSEFMPIVQTASEHHQPVNGSYFARANPADGKCLLEKYSQKyPDFGCALLANLFASEGQPGKVIEVQAKKRTG 180
Cdd:pfam08925  81 PFPVVGVNCELIPNLSWQGDGKNVVNGSRIAKVNPEDGSCCLLEYPNS-EDCRFALLANLFGSEGKPGKVLKVVAKKRTG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139   181 EHNFVSCMRQTLEKHYGDKPVGMGGTFLVQKGKVKAHIMPaEFSSCSLNSDEAVNQWLNFYEMKAPLVCLPVFVSKDPGL 260
Cdd:pfam08925 160 DKSFTTCIRKALAKHYGDKPVGLGGVFLIKNGKAKFHVMP-DFSKTPLKTEEDVNNWLKFFEMSAPLVCLGVLVSHDPGL 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 62079139   261 DLRLEHTHFFSHHGEGGHYHYDTTPDTVEYLGYFSPAQFLYRI 303
Cdd:pfam08925 239 DLRLEHTHCFSHHGEGGHYHYDTTPETVEYEGYFNPAKKLYRI 281
AldB-like cd17297
proteins similar to alpha-acetolactate dehydrogenase; The structure of this domain displays an ...
56-304 3.45e-49

proteins similar to alpha-acetolactate dehydrogenase; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an H(x)H(x)nH motif (x could be any residue, n could be 9 or 10) that coordinates a zinc ion. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


Pssm-ID: 341209  Cd Length: 209  Bit Score: 163.02  E-value: 3.45e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139  56 QTRIAEVGGVPYLLPLVnKKKVYDLNEIAKEIklpgafILGAGAGPFQtlgfNSEFMPIVqtasehhqpvNGSYFARAnp 135
Cdd:cd17297   1 NNTLYQVSTIGALLPGV-YDGTYTLKELLKHG------DFGLGTFDGL----DGELIILD----------GKAYQAKA-- 57
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139 136 aDGKCllekysQKYPDFGCALLANLFASEGQpgkvIEVQAKKRTGEHNFVSCMRQTLEkhygDKPVGMGGTFLVQKGKVK 215
Cdd:cd17297  58 -DGSV------EKVPDDETTPFANVTFFEPD----LTVTLKGRTGLEDLEAALDKLLP----SKNVFYAIRIDGTFGKVK 122
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62079139 216 AHIMPAeFSSCSLNSDEaVNQWLNFYEMK-APLVCLPVFVSKDP-GLDLRLEHTHFFS-HHGEGGHYHYDTtpdTVEYLG 292
Cdd:cd17297 123 TRSVPK-QEKPYPPLAE-VAKWQKEFEFEnVPGTLVGFYTPEYPgGINVPGYHLHFLSdDRKFGGHVLDFT---TVEGEV 197
                       250
                ....*....|..
gi 62079139 293 YFSPAQFLYRID 304
Cdd:cd17297 198 YIQVAEKLYLIL 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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