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Conserved domains on  [gi|47577557|ref|NP_001000348|]
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olfactory receptor Olr668 [Rattus norvegicus]

Protein Classification

olfactory receptor family 4A protein( domain architecture ID 11610412)

olfactory receptor family 4A protein is an odorant receptor belonging to the G-protein coupled receptor 1 family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 1.02e-149

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 420.47  E-value: 1.02e-149
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVTIINSHaLLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15939   1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15939  80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15939 160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                       250       260
                ....*....|....*....|....*...
gi 47577557 263 AFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15939 240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 1.02e-149

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 420.47  E-value: 1.02e-149
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVTIINSHaLLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15939   1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15939  80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15939 160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                       250       260
                ....*....|....*....|....*...
gi 47577557 263 AFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15939 240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 1.71e-38

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 137.25  E-value: 1.71e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557    29 FLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTG 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILF-VIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   109 VEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   189 TDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILI-----YARPAS 262
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLsmvhrFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 47577557   263 AFFSEKNVFLFaTILTPLLNPMIYTFRNKEMKNAIRKM 300
Cdd:pfam13853 240 PLLQIMMANAY-LFFPPVLNPIVYSVKTKQIRDCVKRM 276
 
Name Accession Description Interval E-value
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
23-290 1.02e-149

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 420.47  E-value: 1.02e-149
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVTIINSHaLLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15939   1 KICFVVFLLIYLATVLGNLLIVVTIKASQ-TLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15939  80 EHFFGGAEIFLLTVMAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15939 160 LLKLACTDTYVIGLLVVANSGLICLLSFLILLISYIVILYSLRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRPVT 239
                       250       260
                ....*....|....*....|....*...
gi 47577557 263 AFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15939 240 TFPIDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
26-290 3.46e-120

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 345.73  E-value: 3.46e-120
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  26 FIAFLFVYIATFGGNMIIVVTIInSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHF 105
Cdd:cd15226   4 FVFFSLFYVATVLGNLLIVVTVT-SDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 106 FTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLLK 185
Cdd:cd15226  83 FGGSEMVLLIAMAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPNVVDSFFCDLPLVIK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 186 LACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASAFF 265
Cdd:cd15226 163 LACTDTYVLELMVVANSGLISLVCFLLLLISYIVILVTVRKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFP 242
                       250       260
                ....*....|....*....|....*
gi 47577557 266 SEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15226 243 VDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
24-297 3.59e-109

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 318.25  E-value: 3.59e-109
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15225   2 LLFVVFLLIYLVTLLGNLLIILITKVDPAL-HTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15225  81 LFLGGTECFLLAAMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15225 161 LKLACADTSLNEIAIFVASVLVILVPFLLILVSYIFIISTiLKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15225 241 SYSPETDKLlsLFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
25-290 1.93e-108

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 316.20  E-value: 1.93e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15936   3 LFLVFLLVYLTTWLGNLLIIITVISDPHL-HTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15936  82 FTGGAEVFLLSVMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASAF 264
Cdd:cd15936 162 KLACTDTFLLELLMVSNSGLVTLLIFFILLISYTVILVKIRTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTF 241
                       250       260
                ....*....|....*....|....*.
gi 47577557 265 FSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15936 242 PMDKAVSVLYTVITPMLNPMIYTLRN 267
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
24-290 4.34e-108

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 315.19  E-value: 4.34e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd13954   2 LLFVLFLLIYLLTLLGNLlIILLVRLDSR--LHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd13954  80 FFSLGGTECFLLAVMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd13954 160 LLKLSCSDTSLNELVIFILAGFVGLGSFLLTLVSYIYIISTiLKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPS 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 47577557 262 SAFFSEKNVF--LFATILTPLLNPMIYTFRN 290
Cdd:cd13954 240 SSYSSDLDKVvsVFYTVVTPMLNPIIYSLRN 270
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
24-290 7.46e-106

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 309.44  E-value: 7.46e-106
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15230   2 PLFVLFLLIYLITLVGNLgMIVLIRIDSR--LHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15230  80 FAVFGTTECFLLAAMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNVINHFFCDIPP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15230 160 LLKLSCSDTHINELVLFAFSGFIGLSTLLIILISYLYILITiLRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPS 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 47577557 262 SAFFSEKN--VFLFATILTPLLNPMIYTFRN 290
Cdd:cd15230 240 SSYSLDQDkvVSVFYTVVIPMLNPLIYSLRN 270
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
24-290 7.16e-100

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 294.35  E-value: 7.16e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15940   2 AFFMLFLVLYLLTLSGNILIMITIVMDPRL-HTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15940  81 HLFACTEIFLLTIMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15940 161 IKLACTDTYLIDILIVSNSGLISLVCFVALLGSYIVILVSLRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRPSTS 240
                       250       260
                ....*....|....*....|....*..
gi 47577557 264 FFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15940 241 FSEDKVVSVFYTVVTPLLNPIIYTLRN 267
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
9-299 3.28e-99

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 293.50  E-value: 3.28e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   9 EFLLLGLSQNPKVHKIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYER 88
Cdd:cd15943   1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIV-LIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAEN 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  89 RTISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFC 168
Cdd:cd15943  80 KTISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFC 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 169 GPNVIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVV 247
Cdd:cd15943 160 GSNVINHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAiLRIHSSEGRRKAFSTCASHLMAVT 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 47577557 248 LFFVPCILIYARPASAFFSEKN--VFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15943 240 IFYGTTLFMYLRPSSSYSLDQDkvVSVFYTVVIPMLNPLIYSLRNKEVKDALRR 293
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
24-290 1.30e-98

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 291.28  E-value: 1.30e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15935   2 LLFVLVLACYAAILLGNLLIVVTVHADPHLLQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15935  82 HFLGGSEMLLLTLMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15935 162 IKLACMDTYVVEVLMVANSGLLSLVCFLVLLVSYGIILTTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSS 241
                       250       260
                ....*....|....*....|....*..
gi 47577557 264 FFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15935 242 SSVDKVASVFYTLITPALNPLIYTLRN 268
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
25-297 9.69e-95

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 281.46  E-value: 9.69e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGN-MIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15231   3 LFLIFLIIYLVTLLGNlLIITLVLLDSH--LHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15231  81 VSFVGTECLLLAVMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15231 161 LKLSCSDTSLNEVLLLVASVFIGLTPFLFIVISYVYIISTiLKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFSEKN--VFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15231 241 GYSLDKDtlISVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
25-297 1.55e-94

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 281.02  E-value: 1.55e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15229   3 LFLVFLVIYLLTLLGNLlIMLVIRADSH--LHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15229  81 FFFAGTEAFLLSAMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15229 161 LPLSCSDTFANKMVLLTSSVIFGLGSFLLTLVSYIHIISTiLRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFS--EKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15229 241 ASSSvlDRVFSIQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
10-294 1.66e-94

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 281.52  E-value: 1.66e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  10 FLLLGLSQNPKVHKIIFIAFLFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERR 89
Cdd:cd15408   1 FILLGFTDQPELQVLLFVVFLLIYVITLVGN-LGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  90 TISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCG 169
Cdd:cd15408  80 VISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 170 PNVIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVL 248
Cdd:cd15408 160 SNVINHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATiLRMRSAEGRHKAFSTCASHLTAVTL 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 47577557 249 FFVPCILIYARPASAFFSE--KNVFLFATILTPLLNPMIYTFRNKEMK 294
Cdd:cd15408 240 FYGSLAFMYLRPSSRYSLDldKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
10-300 3.20e-94

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 281.08  E-value: 3.20e-94
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  10 FLLLGLSQNPKVHKIIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYER 88
Cdd:cd15410   1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLgMIVLIKIDPK--LHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAED 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  89 RTISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFC 168
Cdd:cd15410  79 KAISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFC 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 169 GPNVIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVV 247
Cdd:cd15410 159 GSNVINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTiLRIRSAEGRQKAFSTCASHLTAIT 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 47577557 248 LFFVPCILIYARPASAF--FSEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRKM 300
Cdd:cd15410 239 IFHGTILFMYCRPSSSYslDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKL 293
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
25-290 2.20e-93

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 277.91  E-value: 2.20e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIiNSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15938   3 LFALFLLAYTMVLVGNLLIMVTV-RSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15938  82 FVGAAEMFLLTVMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRahSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASAF 264
Cdd:cd15938 162 KLACTDTCVTELLMVSNSGLISTVCFVVLVTSYTTILVTIR--STEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTF 239
                       250       260
                ....*....|....*....|....*.
gi 47577557 265 FSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15938 240 PVDKHVSVLYNVITPMLNPLIYTLRN 265
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
24-290 5.53e-93

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 277.00  E-value: 5.53e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15937   2 LLFVLFLLFYLIILPGNILIILTIQGDPQL-GSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15937  81 HFLGAAEMFLLVAMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15937 161 IKLACTNTYTVELLMFSNSGLVILLCFLLLLISYAFLLAKLRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRS 240
                       250       260
                ....*....|....*....|....*..
gi 47577557 264 FFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15937 241 FPMDKVVAVFHTVIFPLLNPMIYTLRN 267
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
24-299 1.17e-92

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 276.51  E-value: 1.17e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15411   2 PLFVLFLVIYVITVMGNLGMIL-LIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15411  81 IALATTECFLLGLMAYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15411 161 LKLSCSDTHVNEMLIFILAGLTLVGSLLIILVSYTYILSTiLKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 263 AFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15411 241 SYSLGQDKVasVFYTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
24-299 9.52e-92

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 274.24  E-value: 9.52e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15416   2 ILFVLFLVIYSVTLLGNLSIIL-LIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15416  81 ATFGTVECFLLAAMAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15416 161 LKLSCSDIRLAKILPSISSGIIILVTVLTIIISYLYILIAiLRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNS 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 263 AFFSEKN--VFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15416 241 SYSMDQNkvVSVFYMVVIPMLNPLIYSLRNKEVKGALKR 279
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
24-290 2.32e-91

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 272.82  E-value: 2.32e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFa 102
Cdd:cd15912   2 LLFLLLLLTYLLTLLGNLlIITITLVDHR--LHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSF- 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTG-VEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd15912  79 FYFFLGtTEFFLLAVMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSG 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 PLLKLACTDTHIFVILVFAnsGSICIIIFSLLL--VSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYA 258
Cdd:cd15912 159 PLLKLSCSDTRLIELLDFI--LASVVLLGSLLLtiVSYIYIISTiLRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYV 236
                       250       260       270
                ....*....|....*....|....*....|....
gi 47577557 259 RPA--SAFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15912 237 RPSqsSSLDLNKVVALLNTVVTPLLNPFIYTLRN 270
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
24-299 2.48e-91

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 272.98  E-value: 2.48e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15417   2 ILFVLFLGIYLVTLLWNLgLIILIRMDSH--LHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFV 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15417  80 FSGMGLTECFLLAAMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15417 160 LLSLSCSDTFISQVVLFLVAVLFGVFSVLVVLISYGYIISTiLKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPS 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47577557 262 SAFFSEKN--VFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15417 240 SSHSQDQDkvASVFYTVVIPMLNPLIYSLRNKEIKDALKR 279
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
26-290 2.56e-91

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 272.44  E-value: 2.56e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  26 FIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHF 105
Cdd:cd15911   4 FLLFLVIYIVTMAGNILIIVLVVADRHL-HTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 106 FTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLLK 185
Cdd:cd15911  83 LAATECYLLAVMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLK 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 186 LACTDTHIFVILVFAnSGSICIII-FSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15911 163 LSCSDTSLVELVTFI-LSSIVTLPpFLLTLTSYICIISTiLRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPSTN 241
                       250       260
                ....*....|....*....|....*....
gi 47577557 264 FFSEKN-VF-LFATILTPLLNPMIYTFRN 290
Cdd:cd15911 242 TSRDLNkVFsLFYTVLTPLVNPLIYSLRN 270
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
22-297 2.66e-91

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 272.94  E-value: 2.66e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  22 HKIIFIAFLFVYIATFGGNMIIVVTIINSHALLgSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVF 101
Cdd:cd15235   1 QPLLFLLFLAMYLLTLLGNLLIVLLIRSDPRLH-TPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMY 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd15235  80 FFIAFGNTDSFLLAVMAYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCGSNEIPHFFCDLQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 PLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15235 160 PLLKLSCSDTSLNELLIFTEGAVVVLGPFLLIVLSYARILAAvLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQP 239
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 261 ASAFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15235 240 SSSYSADKDRVatVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
24-299 3.25e-91

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 272.64  E-value: 3.25e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15419   2 LLFLLFLVIYMVTVLGN-IGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15419  81 SLFGTTEGFLLAAMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15419 161 LKLSCSDTFINELVMFVLCGLIIVSTILVILVSYAYILSTiLRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGA 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 263 AFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15419 241 VSSPEqsKVVSVFYTLVIPMLNPLIYSLRNKDVKEALKR 279
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
24-299 8.17e-91

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 271.59  E-value: 8.17e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINsHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15409   2 PLFLVFLAIYLITLVGNLGLIALIWK-DSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15409  81 GFSATTECFLLAAMAYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15409 161 LKISCTDPSINELVLFIFSGSIQVFTILTVLISYSYILFTiLKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 263 AFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15409 241 LYALDQDMMdsLFYTIVIPLLNPFIYSLRNKEVIDALRK 279
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
26-290 1.40e-90

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 270.86  E-value: 1.40e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  26 FIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15227   4 FVLFLLIYLAALTGNLlIITVVTLDHH--LHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFI 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15227  82 FFAASELALLTVMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCGSNVIHQFFCDIPQLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVIlFS--LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15227 162 KLSCSDTYLNEIGVLVLSVCLGLGCFVFIIVSYVHI-FStvLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47577557 263 AFFSEKNVFL--FATILTPLLNPMIYTFRN 290
Cdd:cd15227 241 DSPSLLDLLLsvFYSVVPPTLNPIIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
24-296 3.87e-89

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 267.49  E-value: 3.87e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTI-INSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15421   2 FLFSLILLIFLVALTGNALLILLIwLDSR--LHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15421  80 FLTLGGAECLLLALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15421 160 LLKLSCADTSAYETVVYVSGVLFLLIPFSLILASYALILLTvLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPG 239
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 262 SAFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15421 240 SYHSPEqdKVVSVFYTILTPMLNPLIYSLRNKEVLGA 276
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
24-297 1.49e-88

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 265.83  E-value: 1.49e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINShALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15228   2 ILFVLFLAFYLCTLLGNLLILSAILSD-PRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFY 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15228  81 HFLGSTECLLYTVMAYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSNVVDYFFCDIFPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15228 161 LKLACADTSIAETVSFTNVGLVPLTCFLLILASYVRIVISiLKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTP 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47577557 263 AFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15228 241 SPVLVTPVQIFNNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
23-290 2.11e-88

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 265.25  E-value: 2.11e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVTIInSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15918   1 QLLFGLFLGMYLVTVLGNLLIILAIG-SDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15918  80 FLLFGDLDNFLLAVMAYDRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCASNEIPHFFCDLNP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15918 160 LLKLSCSDTHLNELVILVLGGLVGLVPFLCILVSYVRIVSAvLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPP 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 47577557 262 SAFFSEKNVF--LFATILTPLLNPMIYTFRN 290
Cdd:cd15918 240 SSHSASKDSVaaVMYTVVTPMLNPFIYSLRN 270
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
23-290 3.06e-88

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 264.91  E-value: 3.06e-88
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVTI-INSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVF 101
Cdd:cd15237   1 ILLFILFLLIYLLTLLGNGLIILLIwLDSR--LHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd15237  79 FFLALGVTECVLLAVMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 PLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15237 159 AVLKLACADTSLNEAVIFVTSVLVLLIPFSLILASYIRILATiLRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRP 238
                       250       260       270
                ....*....|....*....|....*....|..
gi 47577557 261 ASAFF--SEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15237 239 HSTHSpdQDKMISVFYTIVTPMLNPLIYSLRN 270
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
24-290 1.32e-87

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 263.35  E-value: 1.32e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15232   2 LLFWLFLFLYAAALTGNSLIILAISTSPKL-HTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15232  81 TWSLGSELLLLTAMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15232 161 LLLSCSDTSLNEIMAFVADVFFGVGNFLLTLTSYGFIIRSiLRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47577557 263 AFFSE--KNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15232 241 SYSPEkdKVVAVLYSVVTPTLNPLIYSLRN 270
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
25-297 1.50e-87

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 263.16  E-value: 1.50e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTII-NSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLL-YERRTISFDGCMAQVFA 102
Cdd:cd15916   3 LFLIFLIIYLLTVLGNLLILLTVWvDSH--LHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15916  81 FHFLGSTECFLYTLMAYDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15916 161 LLKLACADTTINELVIFASIGVVALGCFILILLSYGNIVRAiLRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPG 240
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 47577557 262 SAFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15916 241 SKEALDGVIAVFYTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
24-290 2.41e-86

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 259.93  E-value: 2.41e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15915   2 FLFVLFLLLYLASLLGNGaILAVVIAEPR--LHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15915  80 FHFLGSSEAMLLAVMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSL--RAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15915 160 LLKLACGDTSLNLWLLNIVTGSIALGTFILTLLSYIYIISFLllKVRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRP 239
                       250       260       270
                ....*....|....*....|....*....|..
gi 47577557 261 ASAFFSEKN--VFLFATILTPLLNPMIYTFRN 290
Cdd:cd15915 240 SSGDSLEQDriVALLYTVVTPVLNPLIYTLRN 271
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
25-299 2.83e-86

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 260.04  E-value: 2.83e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15415   3 LFMLFLLIYFITLLGNLGMIV-LIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15415  82 VFVTTEGFLLAVMAYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15415 162 KLSCSDTHINELLLLTFSGVIAMSTLLTIIISYIFILFAiLRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQ 241
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 264 FF--SEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15415 242 YSleQEKVSAVFYTLVIPMLNPLIYSLRNKDVKDALKR 279
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
25-296 4.22e-86

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 259.57  E-value: 4.22e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15420   3 LFGLFSLLYIFTLLGNGLILG-LIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15420  82 ALAHTECVLLAVMSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15420 162 KLACADTWINEILIFAGCVFILLGPFSLILISYLHILAAiLKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSS 241
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47577557 264 F--FSEKNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15420 242 NsaEQEKILSLFYSLFNPMLNPLIYSLRNKQVKGA 276
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
10-299 4.63e-86

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 260.06  E-value: 4.63e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  10 FLLLGLSQNPKVHKIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERR 89
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMII-LIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  90 TISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCG 169
Cdd:cd15945  80 SIPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 170 PNVIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVL 248
Cdd:cd15945 160 SNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITvLKIRSAEGRFKAFSTCASHLTAVGL 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 47577557 249 FFVPCILIYARPASAFF--SEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15945 240 FYGTLLFMYLRPSSSYSldTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALKK 292
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
24-290 1.26e-85

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 257.92  E-value: 1.26e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15431   2 ILFVLLLIVYLVTLLGNGlIILLIRVDSQ--LHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYI 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFIlYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15431  80 SLFLGITECLLLAVMAYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTVIPVLTM-PLHFCGPNVINHFFCEVQA 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15431 159 LLKLACSDTSLNEILMFATSIFTLLLPFSFILVSYIRIGVAvLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQ 238
                       250       260       270
                ....*....|....*....|....*....|.
gi 47577557 262 SAFFSEKN--VFLFATILTPLLNPMIYTFRN 290
Cdd:cd15431 239 SKSSSDQDkiISVFYGVVTPMLNPLIYSLRN 269
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
24-299 3.45e-85

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 257.25  E-value: 3.45e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15413   2 PLFGLFLVIYLTTVMGNLgMIILTRLDSR--LQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15413  80 FLTFIISELFLLSAMAYDRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGsiCIIIFSLL--LVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYAR 259
Cdd:cd15413 160 LLALSCSDTHEKELIILIFAG--FNLISSLLivLVSYLFILSAiLRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQ 237
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 47577557 260 PAS--AFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15413 238 PKSshSLDTDKMASVFYTLVIPMLNPLIYSLRNKEVKDALKK 279
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
23-290 1.31e-83

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 252.93  E-value: 1.31e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVF 101
Cdd:cd15947   1 MPLFVVVLIFYLLTLLGNTaIILLSLLDPR--LHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd15947  79 IFLWLGSTECVLLAVMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 PLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15947 159 ALIKLACVDTTFNELELFVASVFFLLVPLSLILVSYGFIARAvLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQP 238
                       250       260       270
                ....*....|....*....|....*....|..
gi 47577557 261 ASAFFSEKNVF--LFATILTPLLNPMIYTFRN 290
Cdd:cd15947 239 PSSYSQDQGKFisLFYTVVTPTLNPLIYTLRN 270
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
25-296 2.56e-83

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 252.71  E-value: 2.56e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTI-INSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15429   3 LFVLFLVMYLLTLLGNFLIILLIrLDPR--LHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFIS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15429  81 LALGGTEFILLAVMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15429 161 VRLACVDTSLNEVAILVSSVVVLLTPCFLVLLSYIHIISAiLRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRS 240
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 47577557 263 --AFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15429 241 gsSALQEKMISLFYAVVTPMLNPLIYSLRNKEVKGA 276
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
14-300 2.81e-82

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 250.36  E-value: 2.81e-82
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  14 GLSQNPKVHKIIFIAFLFVYIATFGGN--MIIVVTIiNSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTI 91
Cdd:cd15406   1 GLTDQPELQLPLFLLFLGIYVVTVVGNlgMILLITL-SSQ--LHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNII 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  92 SFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPN 171
Cdd:cd15406  78 SYPECMTQLFFFCVFAIAECYMLTAMAYDRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDN 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 172 VIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFF 250
Cdd:cd15406 158 VINHYFCDILPLLKLSCSSTYINELLLFIVGGFNVLATTLAILISYAFILSSiLRIRSAEGRSKAFSTCSSHLAAVGVFY 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 47577557 251 VPCILIYARPASA--FFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRKM 300
Cdd:cd15406 238 GSIIFMYLKPSSSssMTQEKVSSVFYTTVIPMLNPLIYSLRNKDVKNALKKV 289
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
24-303 2.33e-80

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 245.41  E-value: 2.33e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVvTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15414   2 PLFLLFLLVYLITLLGNLGMI-ILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15414  81 GLFVAAECFLLASMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15414 161 LSLSCADTQINKWVLFIMAGALGVLSGLIILVSYIYILIAiLRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSS 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47577557 263 AFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNAIRKMWKR 303
Cdd:cd15414 241 SSSLDldKVVSVFYTAVIPMLNPLIYSLRNKEVKDALRRTIRR 283
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
26-290 2.87e-80

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 244.50  E-value: 2.87e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  26 FIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHF 105
Cdd:cd15224   4 FLLFLIAYVLTLLENLLIILTIWLNSQL-HKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLS 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 106 FTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLLK 185
Cdd:cd15224  83 LACTECVLLAVMAYDRYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLN 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 186 LACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP--AS 262
Cdd:cd15224 163 LSCTDMSLAELVDFILALIILLVPLLVTVASYICIISTvLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPkaIS 242
                       250       260
                ....*....|....*....|....*...
gi 47577557 263 AFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15224 243 SFDSNKLVSVLYTVVTPLLNPIIYCLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
23-299 2.99e-79

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 242.30  E-value: 2.99e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15412   1 PLLFVLFLVIYLITLLGNLGMIL-LIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15412  80 FIALVITEYYMLAVMAYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15412 160 LIKLSCSDTYVKETAMFIVAGFNLSSSLLIILISYLFILIAiLRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPP 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|
gi 47577557 262 SAFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15412 240 SEESVEqsKIVAVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
23-297 4.49e-79

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 241.90  E-value: 4.49e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVF 101
Cdd:cd15434   1 KILSVVVLIFYLLTLVGNTtIILVSCLDSR--LHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLF 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd15434  79 IALGLGGTECVLLAVMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGHHRVDHFFCEMP 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 PLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15434 159 ALIKLACVDTTAYEATIFALGVFILLFPLSLILVSYGYIARAvLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQP 238
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 261 ASAFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15434 239 KNSVSQDQGKFltLFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
24-297 1.02e-78

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 240.91  E-value: 1.02e-78
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLY-ERRTISFDGCMAQVFA 102
Cdd:cd15941   2 LFFLLFLLIYLLTVLGNLLILLTIGSDPHLHGLPMYHFLGHLSFLDACLSSVTVPKVLAGLLTlSGRTISFEGCVVQLYA 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15941  82 FHFLASTECFLYTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPP 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15941 162 VLKLACADTTINELVILANIGIVAAGCFLLIVISYIYIVAAvLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPS 241
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 47577557 262 SAFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15941 242 SSQAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
24-297 4.79e-78

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 239.25  E-value: 4.79e-78
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVvTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15424   2 LLFVVILIIYLLTILGNLVII-ILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15424  81 LSLGSTECLLLGAMAYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15424 161 LKLACADTHITEAIVFGAGVLILLVPLSVILTSYGLILASvLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFS--EKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15424 241 GSTPdrDKQIAVFYIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
24-299 2.68e-77

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 237.37  E-value: 2.68e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINShALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15418   3 ILFVVFLLSYILTLVGNLTLIALICLD-SRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15418  82 AGLAYSECFLLAAMAYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPL 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15418 162 VKLACDDTRVYELILYFILGFNVIAPTALILASYTFILAAiLRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSS 241
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 263 AFFSEKN--VFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15418 242 SHTPDRDkvVALFYTVVNPLLNPLIYSLRNKDVKEALKK 280
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
10-300 5.67e-76

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 234.29  E-value: 5.67e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  10 FLLLGLSQNPKVHKIIFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERR 89
Cdd:cd15944   1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQL-HTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHK 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  90 TISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCG 169
Cdd:cd15944  80 VISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 170 PNVIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVL 248
Cdd:cd15944 160 SNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAiLRMRSAEGRRKAFSTCASHFTGVTL 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 47577557 249 FFVPCILIYARPAS--AFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRKM 300
Cdd:cd15944 240 FYGTVIFMYLRPTSvySLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKL 293
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
25-297 6.97e-76

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 233.48  E-value: 6.97e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIInSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15942   3 LFLFFLVVYLLTLSGNSLIILVVI-SDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15942  82 FLGCAECFLYTVMAYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAML 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15942 162 KLACADTAFNELVTFIDIGLVAMTCFLLILMSYVYIVSAiLKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRPGSQ 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 47577557 264 FFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15942 242 DPLDGVVAVFYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
24-290 4.73e-75

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 231.11  E-value: 4.73e-75
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVvTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15914   2 LLFILLLLIYLFIITGNLLIF-TVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15914  81 HSLGITECYLLTAMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSY-GVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15914 161 LSLACTDTSLNVLVDFVIHAVIILLTFLLILLSYvKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSK 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47577557 263 AF--FSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15914 241 SYslDYDRAIAVVYAVLTPFFNPIIYSLRN 270
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
24-297 1.35e-74

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 230.16  E-value: 1.35e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTII-NSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15234   2 LLFGLFLSMYLVTVLGNLLIILAVSsDSH--LHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15234  80 FLLFGGLDNFLLAVMAYDRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15234 160 VLKLACSDTLINNILIYLATVIFGGIPLSGIIFSYYKIVSSiLRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYISSA 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 262 SAFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15234 240 VTHSSRKTAVasVMYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
23-290 1.60e-74

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 229.95  E-value: 1.60e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGN-MIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVF 101
Cdd:cd15430   1 ILLFVLCLIMYLVILLGNgVLIIITILDSH--LHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd15430  79 LSLAMGSTECVLLAVMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEIL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 PLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15430 159 AVLKLACVDISLNEIIMLVGNIIFLVIPLLLICISYIFILSTiLRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKP 238
                       250       260       270
                ....*....|....*....|....*....|..
gi 47577557 261 AS--AFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15430 239 KSknAQISDKLITLFYGVVTPMLNPIIYSLRN 270
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
25-297 1.97e-74

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 230.00  E-value: 1.97e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15405   3 LFFLFLGIYVVTVVGNLgLITLICLNSH--LHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15405  81 CFFVISECYVLTAMAYDRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCDSNIINHYMCDILPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15405 161 LQLSCTSTYVNELVVFVVVGINIIVPSVTIFISYALILSNiLHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15405 241 VGSVNQGKVssVFYTNVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
23-297 1.17e-71

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 222.74  E-value: 1.17e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15432   1 MVLFVVFLIFYILTLLGNLAIIL-VSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFI 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15432  80 FLGLGSTECVLLAVMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15432 160 LLKLSCVDTTANEAELFVISVLLLLIPLGLILISYIFIVRAvLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPP 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 262 SAFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15432 240 SNSSHDrgKMVALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
25-297 2.08e-70

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 219.66  E-value: 2.08e-70
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTII-NSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15428   3 LFILFLIIYLMTVLGNLLLVLLVIvDSH--LHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15428  81 LSFGITECALLSVMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15428 161 LKLASTDTHQAEMAMFIMCVFTLVLPVLLILASYTRIIYTvFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15428 241 STSKEydKMISVFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
24-290 2.52e-70

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 219.11  E-value: 2.52e-70
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVvTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15913   2 LLFSFFSVIYILTLLGNGAII-CAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15913  81 FSLGTTECFFLSVMAFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYG-VILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15913 161 LALSCVPAPGTELICYTLSSLIIFGTFLFILGSYTlVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47577557 263 AFFSE--KNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15913 241 GNSTGmqKIVTLFYSVVTPLLNPLIYSLRN 270
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
24-297 3.20e-70

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 219.28  E-value: 3.20e-70
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIInSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15233   2 VLFVTFLLAYIVTIGGNLSILAAIL-LEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15233  81 HLLAGADCFLLTAMAYDRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCGPNVINHFFCDLPPL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYG-VILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15233 161 FQLSCSSTHLNELLLFVFAFFMALAPCVLIVVSYAhVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGS 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 263 AFFSEKN--VFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15233 241 VYSSDKDkvIGILNTVLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
25-299 2.79e-69

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 216.90  E-value: 2.79e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNM-IIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15407   3 LFIIFTLIYLITLVGNLgMILLILLDSR--LHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15407  81 VVFATVENFLLASMAYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFCKSNVINHFFCDIPPV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGsiCIIIFSLL--LVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARP 260
Cdd:cd15407 161 LALSCSDIHISEIVLFFLAS--FNVFFALLviLISYLFIFITiLRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQP 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47577557 261 AS--AFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAIRK 299
Cdd:cd15407 239 SSshSMDTDKMASVFYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
24-290 1.31e-67

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 212.34  E-value: 1.31e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVvTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15946   2 ILFAVFLLIYLSILLGNGLII-TLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15946  81 LALGITECTLFSVMAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15946 161 LKLACADTSLNEMVDFVLGVIVLVVPLSLILASYVNIFKAiLKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGS 240
                       250       260       270
                ....*....|....*....|....*....|
gi 47577557 263 AFFSE--KNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd15946 241 NYSPErdKKISLFYNVFTALLNPVIYSLRN 270
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
23-297 4.52e-67

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 211.19  E-value: 4.52e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15433   1 PVLFVVVLIFYLLTLVGNTIIIL-LSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFI 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15433  80 SLALGSAECVLLAVMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15433 160 FLKLACGDDETTEVQMFVARVVILLLPAALILGSYGHVAHAvLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPI 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 262 SAFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15433 240 HRYSQAHGKFvsLFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
24-297 2.59e-63

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 201.54  E-value: 2.59e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTI-INSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15236   2 VFFALFLAMYLTTVLGNLLIILLIrLDSH--LHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15236  80 FIFFGCLDSFLLAVMAYDRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCADNVIPHFFCDLVA 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15236 160 LLKLSCSSTSLNELVIFTEGGLLFVLPLLLILGSYIRIAATiLKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPS 239
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 262 SAFFSEKNVF--LFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15236 240 SNNSSDKDIVasVMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
25-297 1.24e-56

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 184.42  E-value: 1.24e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15223   3 LSLPFLLLYLVALVANSLLLLIIKLERSL-HQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15223  82 FFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMALV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFF--VPCILIYARPA 261
Cdd:cd15223 162 SLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAvLRLASGEARSKALNTCGSHLIVILFFYtaVLVSSLTYRFG 241
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 262 SAFFSEKNVFLFAT--ILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15223 242 KTIPPDVHVLLSVLyiLIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
25-293 1.97e-51

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 170.55  E-value: 1.97e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15917   3 LSIPFCAMYLVALLGNITILF-VIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15917  82 SFTAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVIlvFANSGSICIIIFSLLLV--SYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIY---- 257
Cdd:cd15917 162 KLACGDTRVNSI--YGLFVALLIVGFDLLFIalSYVLILRAvLQLPSKEARLKALSTCGSHICVILIFYTPALFSFlthr 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47577557 258 -----ARPASAFFSekNVFLfatILTPLLNPMIYTFRNKEM 293
Cdd:cd15917 240 fghhvPPHVHILLA--NLYL---LLPPMLNPIVYGVRTKQI 275
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
25-293 9.84e-51

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 169.13  E-value: 9.84e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVvTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15950   3 IAIPFCSMYVIALLGNGTIL-LVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILvGIAWTGGFLHSIIQIIFIL-YLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15950  82 SFTAVESGVLLAMAFDRYVAICHPLRYSAILTSQVIAQI-GLAIVLRALLFMTPLTCLVtSLPYCGSRVVPHSYCEHMAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHifVILVFANSGSICIIIFSLLL--VSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCIL-IYA- 258
Cdd:cd15950 161 VKLACADPR--PSSLYSITGSTLVVGTDSAFiaVSYGLILRAvLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLsIYTq 238
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 259 RPASAFFSEKNVFL--FATILTPLLNPMIYTFRNKEM 293
Cdd:cd15950 239 RFGQGVPPHTQVLLadLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
25-293 4.94e-50

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 167.17  E-value: 4.94e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLF--VYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFA 102
Cdd:cd15952   1 FWIGFPFcaVYLIALLGNCTILF-VIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFP 182
Cdd:cd15952  80 IHTFTGMESAVLVAMAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMG 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHIFVILVFansGSICIIIFSLLLV--SYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPciliyar 259
Cdd:cd15952 160 IAKLACASIRINIIYGL---FAISVLVLDVILIalSYVLILRAvFRLPSHDARLKALSTCGSHVCVILAFYTP------- 229
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 47577557 260 pasAFFS------EKNVFLFATILT--------PLLNPMIYTFRNKEM 293
Cdd:cd15952 230 ---ALFSflthrfGHNIPRYIHILLanlyvvlpPMLNPVIYGVRTKQI 274
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
25-292 4.77e-49

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 164.60  E-value: 4.77e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15222   3 ISIPFCLLYLVALLGNSTILFVIKTEPSL-HEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIM-NRRLCAILVGIAWTGGFLHsIIQIIFILYLPFCGPNVIDHFLCdLFP- 182
Cdd:cd15222  82 TFSFMESSVLLAMAFDRFVAICNPLRYASILtNSRIAKIGLAIVLRSVLLL-LPLPFLLKRLPFCHSNVLSHSYC-LHQd 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLKLACTDTHI------FVILVFANSGSICIiifsllLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCIL 255
Cdd:cd15222 160 VMKLACSDTRVnsiyglFVVLSTMGLDSLLI------LLSYVLILKTvLGIASREERLKALNTCVSHICAVLIFYVPMIG 233
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 47577557 256 I-----YARPASAFFSE--KNVFLFatiLTPLLNPMIYTFRNKE 292
Cdd:cd15222 234 LsmvhrFGKHASPLVHVlmANVYLL---VPPVLNPIIYSVKTKQ 274
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
25-292 6.62e-48

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 161.69  E-value: 6.62e-48
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15221   3 ISIPFCSMYIVALLGNSLLLFVIVTERSL-HEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15221  82 FVFVTESAILLAMAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPciliyarpasA 263
Cdd:cd15221 162 RLACADITVNIWYGLTVALLTVGLDVVLIAVSYALILRAvFRLPSKDARLKALSTCGSHVCVILMFYTP----------A 231
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47577557 264 FFS------EKNVFLFATIL--------TPLLNPMIYTFRNKE 292
Cdd:cd15221 232 FFSflthrfGRHIPRHVHILlanlyvlvPPMLNPIVYGVKTKQ 274
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
25-292 1.97e-43

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 150.19  E-value: 1.97e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALLGsPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15951   3 ISIPFCIMYAVALLGNFTILFIVKTEPSLHE-PMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15951  82 SFSTMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHI------FVILVFANSGSICIIifslllVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIY 257
Cdd:cd15951 162 KLACADTRVsrayglSVAFLVGGLDVIFIA------VSYIQILRAvFKLPSKEARLKTFGTCGSHICVILVFYIPALFSF 235
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 47577557 258 ---------ARPASAFFSekNVFLfatILTPLLNPMIYTFRNKE 292
Cdd:cd15951 236 lthrfghnvPPHVHILIA--NVYL---LVPPMLNPIIYGVRTKQ 274
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
25-292 2.56e-39

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 139.32  E-value: 2.56e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15953   3 ISIPFCLMYIVTLLGNCTILFVVGKEQSL-HKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15953  82 TLSIMESAVLVAMAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVI--LVFAnsgsICIIIFSLLLV--SYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPciliyar 259
Cdd:cd15953 162 KLACGDTTINRIygLVVA----LLVVGLDLLLIalSYALIIRAvLRLSSKKARQKALNTCTAHICVILMSYTP------- 230
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 47577557 260 pasAFFS------EKNV-----FLFATI---LTPLLNPMIYTFRNKE 292
Cdd:cd15953 231 ---ALFSflthrfGQGIaphihIILANLyllVPPMLNPIIYGVKTKE 274
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
29-300 1.71e-38

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 137.25  E-value: 1.71e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557    29 FLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTG 108
Cdd:pfam13853   1 FCLMYLIIFLGNGTILF-VIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   109 VEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLLKLAC 188
Cdd:pfam13853  80 MESAVLLAMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSC 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   189 TDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILI-----YARPAS 262
Cdd:pfam13853 160 ADIKVNNIYGLFVVTSTFGIDSLLIVLSYGLILRTvLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLsmvhrFGHNVP 239
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 47577557   263 AFFSEKNVFLFaTILTPLLNPMIYTFRNKEMKNAIRKM 300
Cdd:pfam13853 240 PLLQIMMANAY-LFFPPVLNPIVYSVKTKQIRDCVKRM 276
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
22-294 2.33e-37

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 134.26  E-value: 2.33e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  22 HKIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVF 101
Cdd:cd15948   1 HPWISIPFCSAFTVALLGNCTLLY-VIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAiLVGIAWTGGFLHSIIQIIFILY-LPFCGPNVIDHFLCDL 180
Cdd:cd15948  80 FLHSFSIMESAVLLAMAFDRYVAICNPLRYATILTNSVIT-KIGLAALARAVTLMTPLPFLLRrLPYCRSHVIAHCYCEH 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 181 FPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCIL--IY 257
Cdd:cd15948 159 MAVVKLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAvLSLASKEEQLKAFGTCGSHICAILVFYTPVVLssTM 238
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 258 ARPASAFFSEKNVFL--FATILTPLLNPMIYTFRNKEMK 294
Cdd:cd15948 239 HRFARHVAPHVHILLanFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
25-293 8.97e-36

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 129.98  E-value: 8.97e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15956   3 LSLPFCFIYVLSLLGNGVLLSVVWKEHRL-HQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15956  82 AFSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFS-LRAHSSEGRHKALSTCGSHITVVVLFFVPCILIY------ 257
Cdd:cd15956 162 KLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTvLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVlmhrfg 241
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 258 -ARPASAFFSEKNVFLfatILTPLLNPMIYTFRNKEM 293
Cdd:cd15956 242 hSVPSAAHVLLSNLYL---LLPPALNPIVYGIRTKQI 275
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
8-294 6.29e-33

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 122.96  E-value: 6.29e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   8 TEFLLLGLSQNPKVHKIIFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYE 87
Cdd:cd15949   2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILF-IIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  88 RRTISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPF 167
Cdd:cd15949  81 SNEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPW 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 168 CGPNVIDHFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSL-RAHSSEGRHKALSTCGSHITVV 246
Cdd:cd15949 161 YRTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVqRLATSEARLKTFGTCVSHVCAI 240
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 47577557 247 VLFFVPCIL--IYARPASAFFSEKNVFL--FATILTPLLNPMIYTFRNKEMK 294
Cdd:cd15949 241 LAFYVPIAVssLIHRFGQNVPPPTHILLanFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
25-293 5.79e-32

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 119.93  E-value: 5.79e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15954   3 ISIPFCFMYIIAMVGNCGLLY-LIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPLL 184
Cdd:cd15954  82 TFTGMESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSS-EGRHKALSTCGSHITVVVLFFVPCILIYAR---- 259
Cdd:cd15954 162 KLACANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSkEARSKAFSTCTAHICAIVITYTPAFFTFFAhrfg 241
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 47577557 260 ----PASAFFSEKNVFLfatILTPLLNPMIYTFRNKEM 293
Cdd:cd15954 242 ghhiTPHIHIIMANLYL---LLPPMMNPIVYGVKTKQI 276
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
25-293 6.29e-28

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 109.09  E-value: 6.29e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNMIIVVtIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15955   3 IGIPFCIMFLLAVLGNCTLLI-VIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRR-LCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15955  82 TLQAFESGILLAMALDRYVAICHPLRHSSILTPQvLLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSL-RAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPAS 262
Cdd:cd15955 162 VKLAADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVfRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRF 241
                       250       260       270
                ....*....|....*....|....*....|....*
gi 47577557 263 AFFSEKNV-FLFATI---LTPLLNPMIYTFRNKEM 293
Cdd:cd15955 242 GHHVAPYVhILLSNLyllVPPVLNPIVYGVKTKQI 276
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
39-286 5.94e-26

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 103.53  E-value: 5.94e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557    39 GNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERR-TISFDGCMAQVFAVHFFTGVEVIILITM 117
Cdd:pfam00001   1 GNLLVILVILRNKKL-RTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDwPFGSALCKIVGALFVVNGYASILLLTAI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   118 AYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNvidHFLCDLFPLLKLACTDTHIFVIL 197
Cdd:pfam00001  80 SIDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGN---VTVCFIDFPEDLSKPVSYTLLIS 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557   198 VFAnsgsiCIIIFSLLLVSYGVILFSLRAHSSEG--------RHKALSTCGSHITVVVLFFVPCILIYARPASAFFSEKN 269
Cdd:pfam00001 157 VLG-----FLLPLLVILVCYTLIIRTLRKSASKQkssertqrRRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 47577557   270 --------VFLFATILTPLLNPMIY 286
Cdd:pfam00001 232 rlldkalsVTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
25-290 3.98e-17

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 79.64  E-value: 3.98e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd00637   1 LAVLYILIFVVGLVGN-LLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQS 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLfpll 184
Cdd:cd00637  80 VSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDL---- 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 klacTDTHIFVILVFAnsgSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSH------------ITVVVLFFV- 251
Cdd:cd00637 156 ----TLSKAYTIFLFV---LLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRrrrrerkvtktlLIVVVVFLLc 228
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 47577557 252 --------PCILIYARPASAFFSEKNVFLFATILTPLLNPMIYTFRN 290
Cdd:cd00637 229 wlpyfillLLDVFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-297 8.36e-12

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 64.12  E-value: 8.36e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLgSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd14967   1 LLAVFLSLIILVTVFGNLLVILAVYRNRRLR-TVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPnviDHFLCDLFPL 183
Cdd:cd14967  80 VLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSV---VDCECEFTPN 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 lklactDTHIFVILVFAnsgsiCIIIFSLLLVSYGVILFSLRAHssegrHKALSTcgshITVVVLFFVPC---------I 254
Cdd:cd14967 157 ------KIYVLVSSVIS-----FFIPLLIMIVLYARIFRVARRE-----LKAAKT----LAIIVGAFLLCwlpffiiylV 216
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 47577557 255 LIYARPASAFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd14967 217 SAFCPPDCVPPILYAVFFWLGYLNSALNPIIYALFNRDFRRAF 259
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
24-297 1.13e-10

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 61.07  E-value: 1.13e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINsHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd14969   2 VLAVYLSLIGVLGVVLNGLVIIVFLK-KKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLcAILVGIAWTGGFLHSIiqiifilyLPFCGPNVIDHFL----CD 179
Cdd:cd14969  81 TFLGLVSISTLAALAFERYLVIVRPLKAFRLSKRRA-LILIAFIWLYGLFWAL--------PPLFGWSSYVPEGggtsCS 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 180 LFPLLKLACTDTHIFVILVFANSGSICIIIFSlllvsYGVILFSLRAHSSEGRHKALSTCGS-----------HITVVVL 248
Cdd:cd14969 152 VDWYSKDPNSLSYIVSLFVFCFFLPLAIIIFC-----YYKIYRTLRKMSKRAARRKNSAITKrtkkaekkvakMVLVMIV 226
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47577557 249 FFVPCILIYARPA--SAFFSEKNVFLFATILTPLL-------NPMIYTFRNKEMKNAI 297
Cdd:cd14969 227 AFLIAWTPYAVVSlyVSFGGESTIPPLLATIPALFaksstiyNPIIYVFMNKQFRRAL 284
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
27-296 8.24e-09

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 55.38  E-value: 8.24e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  27 IAFLFVYIATFGGNMIIVVTIINSHALLgSPMYFFLAFLSFLDaCISSVITPKITVDLLYERRTISFDGCMA-QVFAVHF 105
Cdd:cd14972   3 VVAIVLGVFIVVENSLVLAAIIKNRRLH-KPMYILIANLAAAD-LLAGIAFVFTFLSVLLVSLTPSPATWLLrKGSLVLS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 106 FTgVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIiqiifilyLPFCGPNVIDHFL--C-DLFP 182
Cdd:cd14972  81 LL-ASAYSLLAIAVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSVLLAL--------LPVLGWNCVLCDQesCsPLGP 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLklacTDTHIFVILVFAnsgsicIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSH--------ITVVVLF--FVP 252
Cdd:cd14972 152 GL----PKSYLVLILVFF------FIALVIIVFLYVRIFWCLWRHANAIAARQEAAVPAQpstsrklaKTVVIVLgvFLV 221
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 47577557 253 C---------ILIYARPASAFFSEKNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd14972 222 CwlpllillvLDVLCPSVCDIQAVFYYFLVLALLNSAINPIIYAFRLKEMRRA 274
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
40-297 1.04e-06

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 49.07  E-value: 1.04e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  40 NMIIVVTIINSHALLGSPMYFFLAFLSFLDAcISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGVEVIILITMAY 119
Cdd:cd15341  18 NVAVLYLILSSPKLRRKPSYLFIGSLALADF-LASVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMSFTASLGSLLLMAF 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 120 DRYVAICKPLLYSSIMNRRLCAILVGIAWtggflhsiIQIIFILYLPFCGPNV--IDHFLCDLFPLLKLACTDTHIFVIl 197
Cdd:cd15341  97 DRYVCIYYPSEYKALVTRKRALVALAVMW--------VLTALIAYLPLMGWNCcpLNSPCSELFPLIPNDYLLSWLLLV- 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 198 vfansgsicIIIFSLLLVSYGVILFSLRAH--------SSEGRHKA--------LSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15341 168 ---------AILLSGIIYTYGHVLWKAHKHvvymekhqDQQGPGNArmrldvrlAKTLGLVLAVLLICWSPVLALMMHSL 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47577557 262 SAFFSE--KNVFLFATIL---TPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15341 239 FTSLSDhiKKAFAFCSTLclvNSMVNPIIYALRSRELRSSL 279
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
31-174 3.06e-06

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 47.61  E-value: 3.06e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  31 FVYIATFGGNMIIVVTIINSHALLgSPMYFFLAFLSFLD---ACISsvITPKITVDLlyerrTISFDGCMAQVFAVHFFT 107
Cdd:cd15196   9 TILVLALFGNSCVLLVLYRRRRKL-SRMHLFILHLSVADllvALFN--VLPQLIWDI-----TYRFYGGDLLCRLVKYLQ 80
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47577557 108 GVEV----IILITMAYDRYVAICKPLLYSSIMNRRlCAILVGIAWTGGFLHSIIQiIFILYLPFCGPNVID 174
Cdd:cd15196  81 VVGMyassYVLVATAIDRYIAICHPLSSHRWTSRR-VHLMVAIAWVLSLLLSIPQ-LFIFSYQEVGSGVYD 149
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
54-230 9.40e-06

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 46.56  E-value: 9.40e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  54 LGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLLYSS 133
Cdd:cd15083  31 LRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFSGGLFGIMSINTLAAIAVDRYLVITRPMKASV 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 134 IMNRRLCAILVGIAWtggfLHSIIQIIfilyLPFCGPN--VIDHFL--CDLFPLLKLACTDTHIFVILVFANSGSICIII 209
Cdd:cd15083 111 RISHRRALIVIAVVW----LYSLLWVL----PPLFGWSryVLEGLLtsCSFDYLSRDDANRSYVICLLIFGFVLPLLIII 182
                       170       180
                ....*....|....*....|.
gi 47577557 210 FslllvSYGVILFSLRAHSSE 230
Cdd:cd15083 183 Y-----CYSFIFRAVRRHEKA 198
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
25-296 9.48e-06

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 46.20  E-value: 9.48e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVY-IATFGGNMIIVVTIINSHaLLGSPMYFFLAFLSFLDACISSVITP-KITVDLLYERRTISFDGC-MAQVF 101
Cdd:cd15067   1 LLGVVLSLFcLVTVAGNLLVILAVLRER-YLRTVTNYFIVSLAVADLLVGSIVMPfSILHEMTGGYWLFGRDWCdVWHSF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGvEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWtggFLHSIIQIIFILYLPFCGPNVIDHFLCdLF 181
Cdd:cd15067  80 DVLASTA-SILNLCVISLDRYWAITDPISYPSRMTKRRALIMIALVW---ICSALISFPAIAWWRAVDPGPSPPNQC-LF 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 pllklacTDTHIFVILvfansgSICI---IIFSLLLVSYGVIlfsLRAHSSEgrHKALSTCGSHITVVVL----FFVPCI 254
Cdd:cd15067 155 -------TDDSGYLIF------SSCVsfyIPLVVMLFTYYRI---YRAAAKE--QKAAKTLGIVMGVFILcwlpFFVTNI 216
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 47577557 255 LIYARPASAFFSEKNVFLFATILTPL---LNPMIYTFRNKEMKNA 296
Cdd:cd15067 217 LIGFCPSNCVSNPDILFPLVTWLGYInsgMNPIIYACSSRDFRRA 261
7tmA_Parietopsin cd15085
non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled ...
26-146 1.09e-05

non-visual parietopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Parietopsin is a non-visual green light-sensitive opsin that was initially identified in the parietal eye of lizards. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Parietopsin belongs to the class A of the G protein-coupled receptors and shows strong homology to the vertebrate visual opsins.


Pssm-ID: 320213 [Multi-domain]  Cd Length: 280  Bit Score: 46.00  E-value: 1.09e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  26 FIAFLFVYIATFGGNMIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHF 105
Cdd:cd15085   5 FLMFLNATFSIFNNVLVIAVTLKNPQ--LRNPINIFILNLSFSDLMMALCGTTIVTVTNYEGYFYLGDAFCIFQGFAVNY 82
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 47577557 106 FTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGI 146
Cdd:cd15085  83 FGIVSLWSLTLLAYERYNVVCKPMGGLKLSTKRGYQGLLFI 123
7tmA_Pinopsin cd15084
non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled ...
30-300 1.88e-05

non-visual pinopsins, member of the class A family of seven-transmembrane G protein-coupled receptors; Pinopsins are found in the pineal organ of birds, reptiles and amphibians, but are absent from teleosts and mammals. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Pinopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320212 [Multi-domain]  Cd Length: 295  Bit Score: 45.62  E-value: 1.88e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  30 LFVYIATFGGNMIIVVTIinSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGV 109
Cdd:cd15084  19 MVVALASFVNGLVIVVSI--KYKKLRSPLNYILVNLAVADLLVTLFGSSVSFSNNIVGFFVFGKTMCEFEGFMVSLTGIV 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 110 EVIILITMAYDRYVAICKPlLYSSIMNRRLCAILVGIAWTGGFLHSIIQII-FILYLP-----FCGPNvidhflcdlfpl 183
Cdd:cd15084  97 GLWSLAILAFERYLVICKP-MGDFRFQQRHAVSGCAFTWGWSLLWTSPPLFgWSSYVPeglrtSCGPN------------ 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANsgsiCIII-FSLLLVSYGVILFSLRA-----HSSEGRHKALSTCGSHITVVVLFFVPCILIY 257
Cdd:cd15084 164 WYTGGTNNNSYILALFVT----CFALpLSTIIFSYSNLLLTLRAvaaqqKESETTQRAEKEVTRMVIAMVMAFLICWLPY 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 47577557 258 ARPASAFFSEKNVFLFATILT---------PLLNPMIYTFRNKEMKNAIRKM 300
Cdd:cd15084 240 ATFAMVVATNKDVVIQPTLASlpsyfsktaTVYNPIIYVFMNKQFRSCLLEL 291
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
24-295 2.37e-05

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 44.95  E-value: 2.37e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCmaqvfav 103
Cdd:cd15329   2 LIGIVLLIIILGTVVGNALVIIAVCLVKKL-RTPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILC------- 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVII-------LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSiIQIIFILYLPFCGPNVidhf 176
Cdd:cd15329  74 DVWISFDVLLctasilnLCAISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALIS-IPPLFGWKNKVNDPGV---- 148
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 177 lcdlfpllklaCTDTHIFVILVFANSGSICIIIFSLLLVSYGVilfsLRAHSSEGrhKALSTCGshitVVVLFFVPC--- 253
Cdd:cd15329 149 -----------CQVSQDFGYQIYATFGAFYIPLIVMLVLYYKI----YRAAKSER--KAIKTLG----IIMGAFTLCwlp 207
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 47577557 254 --ILIYARPASAFFSEKNV-------FLFATILTPLLNPMIYTFRNKEMKN 295
Cdd:cd15329 208 ffILALLRPFLKPIKCSCIplwlsrlFLWLGYANSFLNPIIYAKFNREFRT 258
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
105-166 2.77e-05

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 44.85  E-value: 2.77e-05
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLP 166
Cdd:cd15055  82 ILTSASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSSVLLYDNLNQP 143
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
26-161 5.71e-05

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 43.82  E-value: 5.71e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  26 FIAFLFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHF 105
Cdd:cd15390   4 SIVFVVMVLVAIGGN-LIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFNFTYLLYNDWPFGLFYCKFSNFVAIT 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 47577557 106 FTGVEVIILITMAYDRYVAICKPLLYSsiMNRRLCAILVGIAWTGGFLHSIIQIIF 161
Cdd:cd15390  83 TVAASVFTLMAISIDRYIAIVHPLRPR--LSRRTTKIAIAVIWLASFLLALPQLLY 136
7tmA_S1PR cd15102
sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G ...
42-297 9.53e-05

sphingosine-1-phosphate receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320230 [Multi-domain]  Cd Length: 270  Bit Score: 43.23  E-value: 9.53e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  42 IIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKItvdLLYERRTISFdgCMAQVFA----VHFFTGVEVIILITM 117
Cdd:cd15102  19 LLVLIAIWRHMKFHRPMYYFLGNLALSDLLAGAAYLANI---LLSGARTLRL--SPAQWFLregsMFVALSASVFSLLAI 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 118 AYDRYVAICKPLLYSSIMNRRLCAiLVGIAWtggflhsIIQIIFILyLPFCGPNVIDHfLCDLFPLLKLACTDTHIFVIL 197
Cdd:cd15102  94 AIERHLTMAKMKPYGASKTSRVLL-LIGACW-------LISLLLGG-LPILGWNCLGA-LDACSTVLPLYSKHYVLFCVT 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 198 VFANS-GSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTcgshITVVVLFFVPC--------ILIYARPASA--FFS 266
Cdd:cd15102 164 IFAGIlAAIVALYARIYCLVRASGRKATRASASPRSLALLKT----VLIVLLVFIACwgplfillLLDVACPVKTcpILY 239
                       250       260       270
                ....*....|....*....|....*....|.
gi 47577557 267 EKNVFLFATILTPLLNPMIYTFRNKEMKNAI 297
Cdd:cd15102 240 KADWFLALAVLNSALNPIIYTLRSRELRRAV 270
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
30-296 1.08e-04

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 43.07  E-value: 1.08e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  30 LFVYIATFGGNMIIVVTIINSHALLGSPMYFFLAfLSFLDACISSVITP-KITVDLLYERRTISFDGCMAQVFAVHFFTG 108
Cdd:cd15052   8 LLLVIATIGGNILVCLAISLEKRLQNVTNYFLMS-LAIADLLVGLLVMPlSILTELFGGVWPLPLVLCLLWVTLDVLFCT 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 109 VEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPfcgPNVIDHFLCDLFpllklac 188
Cdd:cd15052  87 ASIMHLCTISLDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVLGIIDT---TNVLNNGTCVLF------- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 189 tdTHIFVIlvfanSGSIC--IIIFSLLLVSYGVILFSLRAhssegRHKALSTCGSHITVVVL-----FFVPCILIYARPA 261
Cdd:cd15052 157 --NPNFVI-----YGSIVafFIPLLIMVVTYALTIRLLSN-----EQKASKVLGIVFAVFVIcwcpfFITNILTGLCEEC 224
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 47577557 262 SAFFSEK--NVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15052 225 NCRISPWllSVFVWLGYVSSTINPIIYTIFNKTFRRA 261
7tmA_MC5R cd15354
melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G ...
42-294 1.28e-04

melanocortin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320476 [Multi-domain]  Cd Length: 270  Bit Score: 43.00  E-value: 1.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  42 IIVVTIINSHALLGSPMYFFLAFLSFLDACIS-SVITPKITVDLLYERRTISFDGCMAQ---VFAVHFFTGV--EVIILI 115
Cdd:cd15354  19 ILVILAIVKNKNLHSPMYFFVCSLAVADMLVSvSNAWETITIYLLNNRHLVIEDAFVRHidnVFDSLICISVvaSMCSLL 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 116 TMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTggfLHSIIQIIFILYlpfcgpnvidhflCDLFPLlkLACTDTHIFV 195
Cdd:cd15354  99 AIAVDRYVTIFYALRYHNIMTVRRAGIIIACIWT---FCTGCGIIFILY-------------SESTYV--IICLITMFFA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 196 ILVFANSgsicIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPC--------ILIYARP----ASA 263
Cdd:cd15354 161 MLFLMVS----LYIHMFLLARTHVKRIAALPGYNSVRQRTSMKGAVTLTILLGIFIVCwapfflhlILMISCPqnlyCVC 236
                       250       260       270
                ....*....|....*....|....*....|.
gi 47577557 264 FFSEKNVFLFATILTPLLNPMIYTFRNKEMK 294
Cdd:cd15354 237 FMSHFNMYLILIMCNSVIDPLIYAFRSQEMR 267
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
24-297 1.37e-04

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 42.82  E-value: 1.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15012   1 IFIILYTLVFCCCFFGN-LLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLCRMYQFVH 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYL----PFCGPNVIDHFLCD 179
Cdd:cd15012  80 SLSYTASIGILVVISVERYIAILHPLRCKQLLTAARLRVTIVTVWLTSAVYNTPYFVFSQTVeilvTQDGQEEEICVLDR 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 180 LFPLLKLacTDTHIFVILVfansgsicIIIFSLLLVSYGVILFSL-RAHSSEGRHKALSTCgshITVVVLFFVPCILIYA 258
Cdd:cd15012 160 EMFNSKL--YDTINFIVWY--------LIPLLIMTVLYSKISIVLwKSSSIEARRKVVRLL---VAVVVSFALCNLPYHA 226
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 47577557 259 RPASAFFSEKNVFL--FATILTPL----------LNPMIYTFRNKEMKNAI 297
Cdd:cd15012 227 RKMWQYWSEPYRCDsnWNALLTPLtflvlyfnsaVNPLLYAFLSKRFRQSM 277
7tmA_CB1 cd15340
cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G ...
27-296 1.91e-04

cannabinoid receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320462 [Multi-domain]  Cd Length: 292  Bit Score: 42.20  E-value: 1.91e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  27 IAFLFVYIATFG--GNMIIVVTIINSHALLGSPMYFFLAFLSFLDaCISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15340   3 IAVLSLTLGTFTvlENLLVLCVILHSRSLRCRPSYHFIGSLAVAD-LLGSVIFVYSFLDFHVFHRKDSPNVFLFKLGGVT 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTggflhsiIQIIFILyLPFCGPNVID-HFLC-DLFP 182
Cdd:cd15340  82 ASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRTKAVIAFCVMWT-------IAIVIAV-LPLLGWNCKKlNSVCsDIFP 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 183 LLklactDTHIFVILVFANSGSICIIIFSLLLV-----SYGVILF------SLRAHSSEGRHKALS---------TCGSH 242
Cdd:cd15340 154 LI-----DETYLMFWIGVTSVLLLFIVYAYMYIlwkahHHAVRMLqrgtqkSIIVYTSEDGKVQTTrpdqtrmdiRLAKT 228
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47577557 243 ITVVVLFFVPC------ILIYARPASAFFSEKNVFLFATILTPL---LNPMIYTFRNKEMKNA 296
Cdd:cd15340 229 LVLILVVLIICwgpllaIMVYDVFGKMNKLIKTVFAFCSMLCLLnstVNPIIYALRSKDLRHA 291
7tmA_mAChR_M1 cd17790
muscarinic acetylcholine receptor subtype M1, member of the class A family of ...
34-165 1.97e-04

muscarinic acetylcholine receptor subtype M1, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. M1 is the dominant mAChR subtype involved in learning and memory. It is linked to synaptic plasticity, neuronal excitability, and neuronal differentiation during early development. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341356 [Multi-domain]  Cd Length: 262  Bit Score: 42.26  E-value: 1.97e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  34 IATFGGNMIIVVTIINSHALLGSPMYFFLAfLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGVEVII 113
Cdd:cd17790  12 LVTVTGNLLVLISFKVNSELKTVNNYFLLS-LACADLIIGAFSMNLYTTYILMGHWALGTVACDLWLALDYVASNASVMN 90
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 47577557 114 LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYL 165
Cdd:cd17790  91 LLIISFDRYFSITRPLTYRAKRTPRRAAIMIGLAWLISFVLWAPAILFWQYL 142
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
24-296 2.30e-04

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 41.93  E-value: 2.30e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIInSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTisfdgcMAQVFAv 103
Cdd:cd15064   2 LISVLLSLIILATILGNALVIAAIL-LTRKLHTPANYLIASLAVADLLVAVLVMPLSAVYELTGRWI------LGQVLC- 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVII-------LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFilylpFCGPNVIDhf 176
Cdd:cd15064  74 DIWISLDVTCctasilhLCVIALDRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISLPPLFG-----WRTPDSED-- 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 177 lcdlfpllKLACTDTHIFVILVFANSGSIcIIIFSLLLVSYGVIlfsLRAHSSEgrHKALSTCGSHITVVVLFFVPCILI 256
Cdd:cd15064 147 --------PSECLISQDIGYTIFSTFGAF-YIPLLLMLILYWKI---YRAAARE--RKAAKTLGIILGAFIVCWLPFFLV 212
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 47577557 257 -YARP--ASAFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15064 213 aLIVPlcSHCWIPLalKSFFLWLGYFNSLINPLIYTFFNKDFRKA 257
7tmA_mAChR cd15049
muscarinic acetylcholine receptor subfamily, member of the class A family of ...
25-161 2.75e-04

muscarinic acetylcholine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341322 [Multi-domain]  Cd Length: 262  Bit Score: 41.92  E-value: 2.75e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVYIATFGGN-MIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15049   3 ICIATGSLSLVTVGGNiLVILSFRVNRQ--LRTVNNYFLLSLACADLIIGLVSMNLYTVYLVMGYWPLGPLLCDLWLALD 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIF 161
Cdd:cd15049  81 YVASNASVMNLLLISFDRYFSVTRPLTYRAKRTPKRAILMIALAWVISFVLWAPAILG 138
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
21-163 4.46e-04

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 41.21  E-value: 4.46e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  21 VHKIIFIAFLFVyiATFGGNMIiVVTIINSHALLGSPMYFFLAFLSFLDACISSV-ITPKITVDLLYER-------RTIS 92
Cdd:cd14986   1 VSRVAVLGVLFV--FTLVGNGL-VILVLRRKRKKRSRVNIFILNLAIADLVVAFFtVLTQIIWEATGEWvagdvlcRIVK 77
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47577557  93 FdgcmAQVFAVHFFTgvevIILITMAYDRYVAICKPLlySSIMNRRLCAILVGIAWTGGFLHSIIQ-IIFIL 163
Cdd:cd14986  78 Y----LQVVGLFAST----YILVSMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSIPQlVIFVE 139
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
24-161 4.65e-04

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 41.19  E-value: 4.65e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTiSFDGCMAQVfaV 103
Cdd:cd15392   2 IIILMYSTIFVLAVGGN-GLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPFSFIALLILQYW-PFGEFMCPV--V 77
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 47577557 104 HFFTGVEVII----LITMAYDRYVAICKPLlySSIMNRRLCAILVGIAWTGGFLHSIIQIIF 161
Cdd:cd15392  78 NYLQAVSVFVsaftLVAISIDRYVAIMWPL--RPRMTKRQALLLIAVIWIFALATALPIAIT 137
7tmA_Peropsin cd15073
retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of ...
25-297 5.99e-04

retinal pigment epithelium-derived rhodopsin homolog, member of the class A family of seven-transmembrane G protein-coupled receptors; Peropsin, also known as a retinal pigment epithelium-derived rhodopsin homolog (RRH), is a visual pigment-like protein found exclusively in the apical microvilli of the retinal pigment epithelium. Peropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Peropsin presumably plays a physiological role in the retinal pigment epithelium either by detecting light directly or monitoring the levels of retinoids, the primary light absorber in visual perception, or other pigment-related compounds in the eye.


Pssm-ID: 320201 [Multi-domain]  Cd Length: 280  Bit Score: 40.88  E-value: 5.99e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  25 IFIAFLFVY-IATFGGNMIIVVTIINSHALLgSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15073   2 IVAAYLIVAgIISTISNGIVLVTFVKFRELR-TPTNALIINLAVTDLGVSIIGYPFSAASDLHGSWKFGYAGCQWYAFLN 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSiMNRRLCAILVGIAWTGGFlhsiiqiiFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15073  81 IFFGMASIGLLTVVAVDRYLTICRPDLGRK-MTTNTYTVMILLAWTNAF--------FWAAMPLVGWASYALDPTGATCT 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHI--FVILVFAnsgsICIII-FSLLLVSYGVILFSLRAHSSEGRHKALS---TCGSHITVVVLFFVPCILIY 257
Cdd:cd15073 152 INWRKNDSSFvsYTMSVIV----VNFIVpLAVMFYCYYNVSRFVKKVLASDCLESVNidwTDQNDVTKMSVIMIVMFLVA 227
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 47577557 258 ARPAS------AFFSEKNVFLFATILTPLL-------NPMIYTFRNKEMKNAI 297
Cdd:cd15073 228 WSPYSivclwaSFGEPKKIPPWMAIIPPLFaksstfyNPCIYVIANKKFRRAI 280
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
42-294 6.36e-04

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 40.66  E-value: 6.36e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  42 IIVVTIINSHALLGSPMYFFLAFLSFLDACISS-------VITPKITVDLLYERRTISFDGCMAQVFAVHFFTgvEVIIL 114
Cdd:cd15353  19 ILVIAAIAKNKNLHSPMYFFICSLAVADMLVSVsngsetvVITLLNGNDTDAQSFTVNIDNVIDSVICSSLLA--SICSL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 115 ITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGflhSIIQIIFILYLPfcgpnvidhflcdlfPLLKLACTDTHIF 194
Cdd:cd15353  97 LSIAVDRYFTIFYALQYHNIMTVRRAGVIITCIWTAC---TVSGVLFIIYSD---------------SSVVIICLISMFF 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 195 VILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVL----FFVPCILIYARPAS----AFFS 266
Cdd:cd15353 159 TMLALMASLYVHMFLLARLHIKRIAVLPGTGPIRQGANMKGAITLTILLGVFVVcwapFFLHLIFYISCPRNpycvCFMS 238
                       250       260
                ....*....|....*....|....*...
gi 47577557 267 EKNVFLFATILTPLLNPMIYTFRNKEMK 294
Cdd:cd15353 239 HFNMYLILIMCNSVIDPLIYAFRSQELR 266
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
31-149 6.93e-04

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 40.90  E-value: 6.93e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  31 FVYIATFGGNMIIVVTIINSHALLGSPmYFFLAFLSFLDACISSVITPKITVDLLYERRTI-SFDGCMAQVFAVHFFTGV 109
Cdd:cd15005   9 LILCVSLAGNLLFSVLIVRDRSLHRAP-YYFLLDLCLADGLRSLACFPFVMASVRHGSGWIyGALSCKVIAFLAVLFCFH 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 47577557 110 EVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWT 149
Cdd:cd15005  88 SAFTLFCIAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWT 127
7tmA_mAChR_M3 cd15299
muscarinic acetylcholine receptor subtype M3, member of the class A family of ...
23-165 7.28e-04

muscarinic acetylcholine receptor subtype M3, member of the class A family of seven-transmembrane G protein-coupled receptors; Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. The M3 receptor is mainly located in smooth muscle, exocrine glands and vascular endothelium. It induces vomiting in the central nervous system and is a critical regulator of glucose homeostasis by modulating insulin secretion. Generally, M3 receptor causes contraction of smooth muscle resulting in vasoconstriction and increased glandular secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320426 [Multi-domain]  Cd Length: 274  Bit Score: 40.70  E-value: 7.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  23 KIIFIAFL--FVYIATFGGNMIIVVTIINSHALLGSPMYFFLAfLSFLDACISSVITPKITVDLLYERRTISFDGCMAQV 100
Cdd:cd15299   2 QVVLIAFLtgILALVTIIGNILVIVSFKVNKQLKTVNNYFLLS-LACADLIIGVISMNLFTTYIIMNRWALGNLACDLWL 80
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47577557 101 FAVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYL 165
Cdd:cd15299  81 SIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQYF 145
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
24-296 7.75e-04

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 40.56  E-value: 7.75e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLGSPMYFFLAfLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15063   2 ISLLVLTFLNVLVVLGNLLVIAAVLCSRKLRTVTNLFIVS-LACADLLVGTLVLPFSAVNEVLDVWIFGHTWCQIWLAVD 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFlhsiiqiiFILYLPFCGPNVIDHFLCDLFPL 183
Cdd:cd15063  81 VWMCTASILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSF--------VICFPPLVGWNDGKDGIMDYSGS 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 --LKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVilfsLRAHSSEGrhKALSTCGSHITVVVLFFVPCILIYARPA 261
Cdd:cd15063 153 ssLPCTCELTNGRGYVIYSALGSFYIPMLVMLFFYFRI----YRAARMET--KAAKTVAIIVGCFIFCWLPFFTVYLVRA 226
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 47577557 262 SAFFSEKN----VFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15063 227 FCEDCIPPllfsVFFWLGYCNSALNPCIYALFSRDFRFA 265
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
24-156 8.31e-04

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 40.42  E-value: 8.31e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIInSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFD-GCMAQVFA 102
Cdd:cd14979   2 LVTAIYVAIFVVGIVGNLLTCIVIA-RHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWWQYPWAFGDgGCKLYYFL 80
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 47577557 103 VHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSI 156
Cdd:cd14979  81 FEACTYATVLTIVALSVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAI 134
7tmA_MC1R cd15351
melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G ...
29-294 8.31e-04

melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320473 [Multi-domain]  Cd Length: 271  Bit Score: 40.16  E-value: 8.31e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  29 FLFVYIATFGGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQvfavHFFTG 108
Cdd:cd15351   7 FLFLGLVSLVENILVVVAIAKNRNL-HSPMYYFICCLAVSDMLVSVSNLIETLFMLLLEHGVLVCRAPMLQ----HMDNV 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 109 VEVII----------LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSiiqiifILYLPFCGPNVIdhflc 178
Cdd:cd15351  82 IDTMIcssvvsslsfLGAIAVDRYITIFYALRYHSIMTLQRAVNAIAGIWLASTVSS------TLFIVYYNSNAV----- 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 179 dlfpllkLACTDTHIFVILVFansgSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGShITVVVL---------- 248
Cdd:cd15351 151 -------ILCLIVFFLFMLVL----MLVLYIHMFILACRHSQSISSQQRRQCPHQQTASLKGA-ITLTILlgifflcwgp 218
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 47577557 249 FFVPCILIYARPASAF----FSEKNVFLFATILTPLLNPMIYTFRNKEMK 294
Cdd:cd15351 219 FFLHLTLIVTCPTHPFclcyFKYFNLFLILIICNSIIDPLIYAFRSQELR 268
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
29-255 9.70e-04

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 40.35  E-value: 9.70e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  29 FLFVYIATFGGNMIIVVTIINSHALLgSPMYFFLAFLSFLDACISSVITPKITVDLlYERRTISFDGCMAQVF----AVH 104
Cdd:cd14997   7 YGVIFVVGVLGNVLVGIVVWKNKDMR-TPTNIFLVNLSVADLLVLLVCMPVALVET-WAREPWLLGEFMCKLVpfveLTV 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 105 FFTGVEVIILITmaYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLpfcgpnVIDHFLCDLFPLL 184
Cdd:cd14997  85 AHASVLTILAIS--FERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFITEFK------EEDFNDGTPVAVC 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 185 KLAcTDTHIFVILVFANSGSICIIIFSLLLVSYGVILFSLRAHSS----EGRHKALSTCGSH-------ITVVVLFFVpC 253
Cdd:cd14997 157 RTP-ADTFWKVAYILSTIVVFFVVPLAILSGLYSVICRRLVGHPAlesrRADAANRHTLRSRrqvvymlITVVVLFFV-C 234

                ..
gi 47577557 254 IL 255
Cdd:cd14997 235 LL 236
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
34-296 1.19e-03

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 40.05  E-value: 1.19e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  34 IATFGGNMIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGVEVII 113
Cdd:cd15104  11 PLIITGNLLVIVALLKLIRKKDTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGENTQKVLCLLRMCFVITSCAASVLS 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 114 LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIF-----ILYLPFCG------PNVIDHFLCDLF- 181
Cdd:cd15104  91 LAAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIGFLPLISpqfqqTSYKGKCSffaafhPRVLLVLSCMVFf 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 182 -PLLKLACTDTHIFVIlVFANSGSICIIIFSLLLVSYgvilfsLRAHSSEgrHKALSTCGSHITVVVLFFVP---CILIY 257
Cdd:cd15104 171 pALLLFVFCYCDILKI-ARVHSRAIYKVEHALARQIH------PRRTLSD--FKAARTVAVLIGCFLLSWLPfqiTGLVQ 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 47577557 258 ARPASAFFSE--KNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15104 242 ALCDECKLYDvlEDYLWLLGLCNSLLNPWIYAFWQKEVRRA 282
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
36-296 1.43e-03

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 39.82  E-value: 1.43e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  36 TFGGNMIIVVTIINSHALLGSPMYFFLAFLSFLDAcISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGVEVIILI 115
Cdd:cd15099  14 TFLENILVLLTILSSTALRRRPSYLFIGSLALADM-LASVIFTISFLDFHVFHQRDSRNLFLFKLGGVTMAFTASVGSLL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 116 TMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTggflhsiiQIIFILYLPFCGPNV--IDHFLCDLFPLLKlacTDTHI 193
Cdd:cd15099  93 LTALDRYLCIYQPSNYKLLVTRTRAKVAILLMWC--------VTIIISFLPLMGWRCktWDSPCSRLFPYID---RHYLA 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 194 FVILVFAnsgsiciIIFSLLLVSYGVILFSLRAH-SSEGRHKA----------------LSTCGSHITVVVL---FFVPC 253
Cdd:cd15099 162 SWTGLQL-------VLLFLIIYAYPYILWKAHRHeANMGGPKLgrqqvkgqarmrmdirLAKTLSLILLVLAicwLPVLA 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 47577557 254 ILIYARPASAFFSEKNVFLFATIL---TPLLNPMIYTFRNKEMKNA 296
Cdd:cd15099 235 FMLVDVRVTLTNKQKRMFAFCSMLclvNSCVNPIIYALRSRELRGA 280
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
28-164 1.46e-03

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 39.67  E-value: 1.46e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  28 AFLFVYIATFGGNMIIVVTIINSHALLGSPMYFFLAfLSFLDACISSVITPKITVDLLYERRTISFDGC-MAQVFAVHFF 106
Cdd:cd15066   5 AMTLIILAAIFGNLLVIISVMRHRKLRVITNYFVVS-LAMADMLVALCAMTFNASVEITGRWMFGYFMCdVWNSLDVYFS 83
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*...
gi 47577557 107 TgVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILY 164
Cdd:cd15066  84 T-ASILHLCCISVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISFLPIFLGWY 140
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
35-296 1.49e-03

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 39.55  E-value: 1.49e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  35 ATFGGNMIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITP-KITVDLLYERrtiSFDGCMAQVFAVHFFTGVEVII 113
Cdd:cd14968  14 SVLGNVLVIWAVKLNRA--LRTVTNYFIVSLAVADILVGALAIPlAILISLGLPT---NFHGCLFMACLVLVLTQSSIFS 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 114 LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLhsiiqiifILYLPFCGPNViDHFLCDLFPLLKLACTDTHI 193
Cdd:cd14968  89 LLAIAIDRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFL--------VGLTPMFGWNN-GAPLESGCGEGGIQCLFEEV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 194 FVI--LVFANSGSICIIIFSLLLVSYGVILFSLR------------AHSSEGRHKALSTCGSHITVVVLFFVPCILIYAR 259
Cdd:cd14968 160 IPMdyMVYFNFFACVLVPLLIMLVIYLRIFRVIRkqlrqiesllrsRRSRSTLQKEVKAAKSLAIILFLFALCWLPLHII 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 47577557 260 PASAFFSEKN-----VFLFATILTPL---LNPMIYTFRNKEMKNA 296
Cdd:cd14968 240 NCITLFCPECkvpkiLTYIAILLSHAnsaVNPIVYAYRIRKFRQT 284
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
114-159 1.50e-03

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 39.72  E-value: 1.50e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 47577557 114 LITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQI 159
Cdd:cd15057  91 LCVISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISFIPV 136
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
31-149 1.63e-03

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 39.55  E-value: 1.63e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  31 FVYIATFGGNMIIVVTIINSHALLGSPmYFFLAFLSFLDACISSVITPKITVDLLY-ERRTISFDGCMAQVFAVHFFTGV 109
Cdd:cd15217   9 LIICVSLAGNLIVSLLVLKDRALHKAP-YYFLLDLCLADTIRSAVCFPFVLVSIRNgSAWTYSVLSCKIVAFMAVLFCFH 87
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 47577557 110 EVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWT 149
Cdd:cd15217  88 AAFMLFCISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWT 127
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
27-225 1.73e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 39.54  E-value: 1.73e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  27 IAFLFVYIATFGGNMIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQV-----F 101
Cdd:cd14978   5 YVLPVICIFGIIGNILNLVVLTRKS--MRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYSSSFLSYFYAYFlpyiyP 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 102 AVHFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFCGPNVIDHFLCDLF 181
Cdd:cd14978  83 LANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLPRFFEYEVVECENCNNNSYYYVIPT 162
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 47577557 182 PLLKLACTdthIFVILVFANSGSICIIIFSLLLVSYGVILFSLR 225
Cdd:cd14978 163 LLRQNETY---LLKYYFWLYAIFVVLLPFILLLILNILLIRALR 203
7tmA_5-HT5 cd15328
serotonin receptor subtype 5, member of the class A family of seven-transmembrane G ...
24-296 1.78e-03

serotonin receptor subtype 5, member of the class A family of seven-transmembrane G protein-coupled receptors; 5-HT5 receptor, one of 14 mammalian 5-HT receptors, is activated by the neurotransmitter and peripheral signal mediator serotonin (also known as 5-hydroxytryptamine or 5-HT). The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/0) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320451 [Multi-domain]  Cd Length: 259  Bit Score: 39.16  E-value: 1.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLGSPmYFFLAFLSFLDACISSVITPKITVDLLYERRT----------ISF 93
Cdd:cd15328   2 LVLTLLAMLVVATFLWNLLVLVTILRVRTFHRVP-HNLVASMAVSDVLVAALVMPLSLVHELSGRRWqlgrslcqvwISF 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  94 D--GCMAQVFAVhfftgveviilITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTggfLHSIIQIIFILYlpfcgpn 171
Cdd:cd15328  81 DvlCCTASIWNV-----------TAIALDRYWSITRHLEYTLRTRRRISNVMIALTWA---LSAVISLAPLLF------- 139
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 172 vidhFLCDLFPLLKLACTDTHIFVILVFANSGSICIIIFSLLLVSYGVIlfslraHSSEGRHKALSTCGSHITVVVLFFV 251
Cdd:cd15328 140 ----GWGETYSEDSEECQVSQEPSYTVFSTFGAFYLPLCVVLFVYWKIY------KAAQKEKRAALMVGILIGVFVLCWI 209
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 47577557 252 PCILiyARPASAFFS------EKNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15328 210 PFFL--TELISPLCScdippiWKSIFLWLGYSNSFFNPLIYTAFNKNYNNA 258
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
27-148 1.78e-03

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 39.32  E-value: 1.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  27 IAFLFVYIATFG--GNMIIVVTIINSHALLgSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVH 104
Cdd:cd15336   3 VGSVILIIGITGmlGNALVIYAFCRSKKLR-TPANYFIINLAVSDFLMSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGA 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47577557 105 FFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAW 148
Cdd:cd15336  82 LFGITSMITLLAISLDRYLVITKPLASIRWVSKKRAMIIILLVW 125
7tmA_Parapinopsin cd15075
non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled ...
95-294 2.05e-03

non-visual parapinopsin, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the non-visual pineal pigment, parapinopsin, which is a member of the class A of the seven transmembrane G protein-coupled receptors. Parapinopsin serves as a UV-sensitive pigment for the wavelength discrimination in the pineal-related organs of lower vertebrates such as reptiles, amphibians, and fish. Although parapinopsin is phylogenetically related to vertebrate visual pigments such as rhodopsin, which releases its retinal chromophore and bleaches, the parapinopsin photoproduct is stable and does not bleach. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells.


Pssm-ID: 320203 [Multi-domain]  Cd Length: 279  Bit Score: 38.99  E-value: 2.05e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  95 GCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLlySSIMNRRLCAiLVGIAWTggFLHSIIQIIFILY---------- 164
Cdd:cd15075  72 GCVLEGFAVAFFGIAALCTVAVIAVDRLFVVCKPL--GTLTFQTRHA-LAGIASS--WLWSLIWNTPPLFgwgsyqlegv 146
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 165 LPFCGPNVIDHFLCDLFpllklactdthiFVILVFansgSICIII-FSLLLVSYGVILFSLRAHSSEGRHKALST----- 238
Cdd:cd15075 147 MTSCAPDWYSRDPVNVS------------YILCYF----SFCFAIpFAIILVSYGYLLWTLRQVAKLGVAEGGSTakaev 210
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 47577557 239 CGSHITVVVLF-FVPCILIYARPASAFFSEKNVFLFATILT---------PLLNPMIYTFRNKEMK 294
Cdd:cd15075 211 QVARMVVVMVMaFLLCWLPYAAFALTVVSKPDVYINPLIATvpmylakssTVYNPIIYIFMNKQFR 276
7tmA_tyramine_R-like cd15061
tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
24-296 2.32e-03

tyramine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine-specific receptors and similar proteins found in insects and other invertebrates. These tyramine receptors form a distinct receptor family that is phylogenetically different from the other tyramine/octopamine receptors which also found in invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320189 [Multi-domain]  Cd Length: 256  Bit Score: 38.88  E-value: 2.32e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLGSPmYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15061   1 ILISFLILAIIFTIFGNLLVILAVATTRRLRTIT-NCYIVSLATADLLVGVLVLPLAIIRQLLGYWPLGSHLCDFWISLD 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWtggflhsiIQIIFILYLPFCGPNviDHFLCDLFpl 183
Cdd:cd15061  80 VLLCTASILNLCCISLDRYFAITYPLKYRTKRSRRLAITMILAVW--------VISLLITSPPLVGPS--WHGRRGLG-- 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 lKLACTDTHIFVILvfansGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPCILIYARPASA 263
Cdd:cd15061 148 -SCYYTYDKGYRIY-----SSMGSFFLPLLLMLFVYLRIFRVIAKERKTAKTLAIVVGCFIVCWLPFFIMYLIEPFCDCQ 221
                       250       260       270
                ....*....|....*....|....*....|....
gi 47577557 264 FFSE-KNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15061 222 FSEAlSTAFTWLGYFNSVINPFIYAFYNKDFRRA 255
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
42-296 2.67e-03

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 38.62  E-value: 2.67e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  42 IIVVTIINSHALLGSPMYFFLAFLSFLDACIS-SVITPKITVDLL---YERRTISFDGCMAQVFAVHFFTGVEVII--LI 115
Cdd:cd15103  19 ILVILAIAKNKNLHSPMYFFICSLAVADMLVSvSNALETIVIILLnngYLVPRDSFEQHIDNVIDSMICSSLLASIcsLL 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 116 TMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFILYLPFcgpnvidhflcdlfpllkLACTDTHIFV 195
Cdd:cd15103  99 AIAVDRYITIFYALRYHSIMTVRRAGVIITAIWVFCTVCGILFIIYSDSVPV------------------IICLISMFFA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 196 ILVFANSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVL----FFVPCILIYARPA----SAFFSE 267
Cdd:cd15103 161 MLVLMASLYVHMFLLARSHVKKIAALPGQRSTRQRANMKGAVTLTILLGVFIFcwapFFLHLTLMISCPSnpycACYMSH 240
                       250       260
                ....*....|....*....|....*....
gi 47577557 268 KNVFLFATILTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15103 241 FNVYLILIMCNSVIDPLIYAFRSQELRKT 269
7tmA_AKHR cd15382
adipokinetic hormone receptor, member of the class A family of seven-transmembrane G ...
24-241 4.10e-03

adipokinetic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flight, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. AKH is structurally related to the mammalian gonadotropin-releasing hormone (GnRH) and they share a common ancestor. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320504 [Multi-domain]  Cd Length: 298  Bit Score: 38.45  E-value: 4.10e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITPK-----ITV-----DLLyerrtisf 93
Cdd:cd15382   2 VSIIVYSVLFLIAAVGNLTVLLILLRNRRRKRSRVNILLMHLAIADLLVTFIMMPLeigwaATVawlagDFL-------- 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  94 dgCMAQVFAVHFFTGVEVIILITMAYDRYVAICKPLlySSIMNRRLCAILVGIAWTGGFLHSIIQIifILYLPFCGPNVI 173
Cdd:cd15382  74 --CRLMLFFRAFGLYLSSFVLVCISLDRYFAILKPL--RLSDARRRGRIMLAVAWVISFLCSIPQS--FIFHVESHPCVT 147
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 47577557 174 DHFLC---DLFPllklacTDTHIFVILVFaNSGSICIIIFSLLLVSYGVILFSLRAHSSEGRHKALSTCGS 241
Cdd:cd15382 148 WFSQCvtfNFFP------SHDHELAYNIF-NMITMYALPLIIIVFCYSLILCEISRKSKEKKEDVSEKSSS 211
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
32-148 4.36e-03

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 38.20  E-value: 4.36e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  32 VYIATFGGNMIIVVTIINSHALLGSPMYFFLAfLSFLDACISSVITPKITVDLLYERRTISFDGCmaqvfavHFFTGVEV 111
Cdd:cd15058  10 IILAIVVGNLLVIIAIARTSRLQTMTNIFITS-LACADLVMGLLVVPLGATIVVTGKWQLGNFWC-------ELWTSVDV 81
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47577557 112 I-------ILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAW 148
Cdd:cd15058  82 LcvtasieTLCVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVW 125
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
24-161 5.04e-03

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 38.17  E-value: 5.04e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATfgGNMIIVVTIINSHALlGSPMYFFLAFLSFLDACISSVitpKITVDLLYeRRTISFDGCMAQVFAV 103
Cdd:cd15197   4 LATLWVLFVFIVV--GNSSVLFALWMRKAK-KSRMNFFITQLAIADLCVGLI---NVLTDIIW-RITVEWRAGDFACKVI 76
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 47577557 104 HFFTGVEV----IILITMAYDRYVAICKPLLYSSimNRRLCAILVGIAWTGGFLHSI-IQIIF 161
Cdd:cd15197  77 RYLQVVVTyastYVLVALSIDRYDAICHPMNFSQ--SGRQARVLICVAWILSALFSIpMLIIF 137
7tmA_mAChR_DM1-like cd15301
muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G ...
24-148 5.20e-03

muscarinic acetylcholine receptor DM1, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes muscarinic acetylcholine receptor DM1-like from invertebrates. Muscarinic acetylcholine receptors (mAChRs) regulate the activity of many fundamental central and peripheral functions. The mAChR family consists of 5 subtypes M1-M5, which can be further divided into two major groups according to their G-protein coupling preference. The M1, M3 and M5 receptors selectively interact with G proteins of the G(q/11) family, whereas the M2 and M4 receptors preferentially link to the G(i/o) types of G proteins. Activation of mAChRs by agonist (acetylcholine) leads to a variety of biochemical and electrophysiological responses. In general, the exact nature of these responses and the subsequent physiological effects mainly depend on the molecular and pharmacological identity of the activated receptor subtype(s). All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320428 [Multi-domain]  Cd Length: 270  Bit Score: 37.88  E-value: 5.20e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  24 IIFIAFLFVYIATFGGNMIIVVTIINSHalLGSPMYFFLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAV 103
Cdd:cd15301   3 IVIVAAVLSLVTVGGNVMVMISFKIDKQ--LQTISNYFLFSLAVADFAIGVISMPLFTVYTALGYWPLGYEVCDTWLAID 80
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 47577557 104 HFFTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAW 148
Cdd:cd15301  81 YLASNASVLNLLIISFDRYFSVTRPLTYRARRTTKKAAVMIASAW 125
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
30-152 5.53e-03

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 37.99  E-value: 5.53e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  30 LFVYIATFGGNmIIVVTIINSHALLGSPMYFFLAFLSFLDACISSVITP-KITVDLLYErrtISFDGCMAQVFAVHFFTG 108
Cdd:cd15069   8 LIIAALSVAGN-VLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPfAITISLGFC---TDFHSCLFLACFVLVLTQ 83
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 47577557 109 VEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGF 152
Cdd:cd15069  84 SSIFSLLAVAVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAF 127
7tmA_5-HT1A_vertebrates cd15330
serotonin receptor subtype 1A from vertebrates, member of the class A family of ...
39-296 6.48e-03

serotonin receptor subtype 1A from vertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320453 [Multi-domain]  Cd Length: 260  Bit Score: 37.65  E-value: 6.48e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  39 GNMIIVVTIINSHALLGSPMYFfLAFLSFLDACISSVITPKITVDLLYERRTISFDGCMAQVFAVHFFTGVEVIILITMA 118
Cdd:cd15330  17 GNACVVAAIALERSLQNVANYL-IGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIA 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 119 YDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIifilyLPFCGPNviDHFLCDlfpllklACTDTHIFVILV 198
Cdd:cd15330  96 LDRYWAITDPIDYVNKRTPRRAAVLISLTWLIGFSISIPPM-----LGWRTPE--DRSDPD-------ACTISKDPGYTI 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 199 FANSGSICIIIFsLLLVSYGVIlfsLRAHSSEgrHKALSTCGSHITVVVLFFVP-CILIYARPASAFFSEKNVFLFATI- 276
Cdd:cd15330 162 YSTFGAFYIPLI-LMLVLYGRI---FKAAARE--RKTVKTLGIIMGTFILCWLPfFIVALVLPFCESTCHMPELLGAIIn 235
                       250       260
                ....*....|....*....|....
gi 47577557 277 ----LTPLLNPMIYTFRNKEMKNA 296
Cdd:cd15330 236 wlgySNSLLNPIIYAYFNKDFQSA 259
7tmA_S1PR2_Edg5 cd15347
sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial ...
56-294 7.41e-03

sphingosine-1-phosphate receptor subtype 2 (S1PR2 or S1P2), also called endothelial differentiation gene 5 (Edg5), member of the class A family of seven-transmembrane G protein-coupled receptors; The endothelial differentiation gene (Edg) family of G-protein coupled receptors binds blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). The Edg receptors couple and activate at least three different G protein subtypes including G(i/o), G(q/11), and G(12/13).


Pssm-ID: 320469 [Multi-domain]  Cd Length: 266  Bit Score: 37.48  E-value: 7.41e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  56 SPMYFFLAFLSFLDACISSVITPKItvdLLYERRTISFDGCMAQVFAVHFFTGV--EVIILITMAYDRYVAICKPLLYSS 133
Cdd:cd15347  33 SAMFFFIGNLAFSDLLAGVAFIANI---LLSGSVTFRLTPVQWFIREGTAFITLsaSVFSLLAIAIERHVAITKVKLYGS 109
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 134 IMNRRLcAILVGIAWtggflhsiIQIIFILYLPFCGPNVIDHfLCDLFPLLKLACTDTHIFVILVFAnsgsiciIIFSLL 213
Cdd:cd15347 110 DKNCRM-VLLIGACW--------VISIVLGGLPILGWNCIGN-LEDCSTVLPLYSKHYILFVVTIFS-------IILLSI 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 214 LVSYGVILFSLRAHSSEGRHKALSTCGSHITVVVLFFVPC--------ILIYARPASA--FFSEKNVFLFATILTPLLNP 283
Cdd:cd15347 173 VILYVRIYCIVRSSHAEMAAPQTLALLKTVTIVLGVFIVCwlpafiilLLDTSCKVKScpILYKADYFFSVATLNSALNP 252
                       250
                ....*....|.
gi 47577557 284 MIYTFRNKEMK 294
Cdd:cd15347 253 VIYTLRSKDMR 263
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
32-297 7.64e-03

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 37.30  E-value: 7.64e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557  32 VYIATFG-----GNMIIVVTIINSHALLgSPMYFFLAFLSFLDACISSVIT-PKITVDLLYERRTISFDGCMAQVFAVHF 105
Cdd:cd15337   5 IYIAIVGilgviGNLLVIYLFSKTKSLR-TPSNMFIINLAISDFGFSAVNGfPLKTISSFNKKWIWGKVACELYGFAGGI 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 106 FTGVEVIILITMAYDRYVAICKPLLYSSIMNRRLCAILVGIAWTGGFLHSIIQIIFIlylpfcGPNVIDHFL--CDLFPL 183
Cdd:cd15337  84 FGFMSITTLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPPFFGW------GRYVPEGFQtsCTFDYL 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 47577557 184 LKLACTDTHIFVILVFANSGSICIIIFslllvSYGVILFSLRAHSSEGRHKALSTCGSHI-----------------TVV 246
Cdd:cd15337 158 SRDLNNRLFILGLFIFGFLCPLLIIIF-----CYVNIIRAVRNHEKEMTQTAKSGMGKDTekndarkkaeiriakvaIIL 232
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 47577557 247 VLFFVPCILIYArpASAFFSeknVFLFATILTPLL--------------NPMIYTFRNKEMKNAI 297
Cdd:cd15337 233 ISLFLLSWTPYA--VVALLG---QFGPAYWITPYVselpvmfakasaiyNPIIYALSHPKFRAAL 292
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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