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Conserved domains on  [gi|268834192|ref|NP_000172|]
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beta-glucuronidase isoform 1 precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Bgal_small_N super family cl46900
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
27-631 0e+00

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


The actual alignment was detected with superfamily member PRK10150:

Pssm-ID: 481240 [Multi-domain]  Cd Length: 604  Bit Score: 754.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  27 MLYPQESPSRECKELDGLWSFRADfsdNRRRGFEEQWYRRPLWEsgpTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVI 106
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAFKLD---RENCGIDQRWWESALPE---SRAMAVPGSFNDQFADADIRNYVGDVWYQREVF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 107 LPERWTQDlrtRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGplpSRLRITIAINNTLTPTTLPPGti 186
Cdd:PRK10150  75 IPKGWAGQ---RIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAG---KSVRITVCVNNELNWQTLPPG-- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 187 QYLTDTSKYPKgyfvQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD--SGLVNYQISVKGsNLFKLEVRLLD 264
Cdd:PRK10150 147 NVIEDGNGKKK----QKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDlnHASVDWSVETNG-DVDSVSVTLRD 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 265 AENKVVANGTGTQGQLKVPGVSLWWPylMHerpAYLYSLEVQLTAQtslGPVSDFYTLPVGIRTVAVTKSQFLINGKPFY 344
Cdd:PRK10150 222 ADGQVVATGQGTSGTLQVVNPHLWQP--GE---GYLYTLCVELAKS---GTECDTYPLRFGIRSVAVKGGQFLINGKPFY 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 345 FHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLAL---------- 414
Cdd:PRK10150 294 FKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVGLNLsfgagleagn 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 415 -------PQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNY 487
Cdd:PRK10150 374 kpketysEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 488 AADKG--APYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSL 565
Cdd:PRK10150 454 TPDTDtvSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCAF 533
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 268834192 566 LEQYHLGLDqkRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIAN 631
Cdd:PRK10150 534 LDMYHRVFD--RVPAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGIPF 597
 
Name Accession Description Interval E-value
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
27-631 0e+00

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 754.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  27 MLYPQESPSRECKELDGLWSFRADfsdNRRRGFEEQWYRRPLWEsgpTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVI 106
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAFKLD---RENCGIDQRWWESALPE---SRAMAVPGSFNDQFADADIRNYVGDVWYQREVF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 107 LPERWTQDlrtRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGplpSRLRITIAINNTLTPTTLPPGti 186
Cdd:PRK10150  75 IPKGWAGQ---RIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAG---KSVRITVCVNNELNWQTLPPG-- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 187 QYLTDTSKYPKgyfvQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD--SGLVNYQISVKGsNLFKLEVRLLD 264
Cdd:PRK10150 147 NVIEDGNGKKK----QKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDlnHASVDWSVETNG-DVDSVSVTLRD 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 265 AENKVVANGTGTQGQLKVPGVSLWWPylMHerpAYLYSLEVQLTAQtslGPVSDFYTLPVGIRTVAVTKSQFLINGKPFY 344
Cdd:PRK10150 222 ADGQVVATGQGTSGTLQVVNPHLWQP--GE---GYLYTLCVELAKS---GTECDTYPLRFGIRSVAVKGGQFLINGKPFY 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 345 FHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLAL---------- 414
Cdd:PRK10150 294 FKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVGLNLsfgagleagn 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 415 -------PQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNY 487
Cdd:PRK10150 374 kpketysEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 488 AADKG--APYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSL 565
Cdd:PRK10150 454 TPDTDtvSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCAF 533
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 268834192 566 LEQYHLGLDqkRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIAN 631
Cdd:PRK10150 534 LDMYHRVFD--RVPAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGIPF 597
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
329-631 3.87e-153

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 443.81  E-value: 3.87e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  329 VAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECP 408
Cdd:pfam02836   1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  409 GVGLALPQFF------------NNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPashleSAGYYLKMVIAHTKSLDPS 476
Cdd:pfam02836  81 LETHGLWQKFgeiepsyseltdNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNES-----GAGENIAAMYAATKSLDPT 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  477 RPVTFVSNSnyaadkGAPYVDVICLNSYYSWYHDYGHLELIqlqlATQFENWYKKYQKPIIQSEYGAETIA--GFHQDPP 554
Cdd:pfam02836 156 RPVHYEGVG------IDPEVDDIILDIYSRMYEDYGHPEVI----EKYLEDWYKKPQKPIIICEYGHAMGNspGGLQEYQ 225
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 268834192  555 LMFT--EEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNkkGIFTRQRQPKSAAFLLRERYWKIAN 631
Cdd:pfam02836 226 DLFYkyPEYQGGFIWDWHDQGIQKRDPNVGGEWYWYGGDFGDRPSDYRFCGN--GLFFADRTPKPALFELKKRYWPIKI 302
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
43-626 1.50e-104

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 330.95  E-value: 1.50e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  43 GLWSFRADFSDNrrrgfeeqwYRRPLWESGPTVDMPVPSSFND------ISQDWRLRHFVGWVWYEREVILPERWTQDlr 116
Cdd:COG3250    1 GGWKFRLGDAPE---------GAKPDFDDSGWDPITVPGDWELdlyglpDPFVGPWYLYNGVGWYRRTFTVPASWKGK-- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 117 tRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGplpsRLRITIAINNTLTPTTLPPGtiqyltdtskyp 196
Cdd:COG3250   70 -RVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPG----ENVLAVRVDNPSDGSYLEGQ------------ 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 197 kgyfvqntyfDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNL--FKLEVRLLDAENKVVANGT 274
Cdd:COG3250  133 ----------DWWRTSGIYRDVWLEATPKVHIEDVFVTPDLDDGSATLTVEVELENESDagVTVEVTLLDADGKVVATAT 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 275 GT-----------QGQLKVPGVSLWWPylmhERPaYLYSLEVQLTAQtslGPVSDFYTLPVGIRTVAVTKS-QFLINGKP 342
Cdd:COG3250  203 AKvtlaageentvTLTLTVPNPKLWSP----EDP-NLYTLVVTLKDD---GKVVDTVSTRFGFRTIEIDGDgGFLLNGKP 274
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 343 FYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECP----GVGLALPQFF 418
Cdd:COG3250  275 VFLKGVNRHEDWPDDGRAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPfewhGMLGDDPEFL 354
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 419 NNvslhhHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYlkmviAHTKSLDPSRPVtfvsnsnyaadkgapyvdv 498
Cdd:COG3250  355 EA-----VEAELREMVRRDRNHPSIILWSGGNESGGGPNFAALY-----EWVKELDPTRPV------------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 499 iclnsyyswyhdyghleliqlqlatqfenwykkyqkpIIQSEYGA---ETIAGFHQDPPlmFTEEYQKSLLEQYHLGLdQ 575
Cdd:COG3250  406 -------------------------------------RFLSEYGHampNSLGGGYHQPS--DFEEYQALQALEEYWEA-F 445
                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268834192 576 KRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFT-RQRQPKSAAFLLRERY 626
Cdd:COG3250  446 RRRPRLAGGFIWQLNDYWPEPRDNDGNFCSWGLVDyYDRTPKPAYYEVKSAW 497
GalB NF041463
beta-galactosidase GalB;
97-540 1.54e-35

beta-galactosidase GalB;


Pssm-ID: 469351 [Multi-domain]  Cd Length: 799  Bit Score: 143.51  E-value: 1.54e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  97 GWVWYEREVILPERwtqDLRTRVVLRIGSAHSYAIVWVNGvdtleHE-G----GYLPFEADISNLVQVGplpSRLRITIA 171
Cdd:NF041463  64 GVAWYRKKLDIPAS---DAGKSIFLDIDGAMSYAMVWLNG-----QLvGgwpyGYNSWRLDLTPYLKPG---GENQLAIR 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 172 INNtltpttlPPgtiqyltDTSK-YPKGyfvqntyfdffnyaGLQRSVLLYTTPTTYIDD--ITVTTS-VEQDSGLVNYQ 247
Cdd:NF041463 133 LDN-------PP-------ESSRwYPGG--------------GLYRNVWLTKTNPVHVAQwgTFVTTPeVSADSATVDLA 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 248 ISVKGSNLFKLEVRL------LDAENK---------------VVANGTGT-QGQLKVPGVSLWWPYLMHERpaYLYSLEV 305
Cdd:NF041463 185 VTVDNDSAADADVEVsteiyaLDADGKrtgkavarfapasltVAAGESATvSGSLTIANPRLWGPPPTQTP--NRYVAVT 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 306 QLTAQtslGPVSDFYTLPVGIRTVAVTKSQ-FLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTS 384
Cdd:NF041463 263 TVYQG---GKVVDRYETPFGIRSLRFDPDRgVLVNGEHIRLQGVNQHHDLGALGAAFNVRAAERQLEILREMGCNAIRMA 339
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 385 HYPYAEEVMQMCDRYGIVVIDE---------CP-GVGLALPQFfnnvslhhHMQVMEEVVRRDKNHPAVVMWSVANE-PA 453
Cdd:NF041463 340 HNPPAPELLELTDRMGFLVVDEifdswerkkTPlDFHLIFPDW--------HEQDLRAMIRRDRNHPSVIMWSIGNEvGE 411
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 454 SHLESAGYYL-KMVIAHTKSLDPSRPVTfvSNSNYAADkGAPY---VDVICLNsyyswYH--------DYGHLELIqlQL 521
Cdd:NF041463 412 QYTGEAGAAIaRRLHDIVKEEDPTRPTT--ASMNYAKP-DMPFpavMDVISLN-----YQgegirdapAYEGLKGI--RT 481
                        490       500
                 ....*....|....*....|
gi 268834192 522 ATQFENWYKKY-QKPIIQSE 540
Cdd:NF041463 482 PPLYPAFHAKFpDKVILSSE 501
 
Name Accession Description Interval E-value
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
27-631 0e+00

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 754.15  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  27 MLYPQESPSRECKELDGLWSFRADfsdNRRRGFEEQWYRRPLWEsgpTVDMPVPSSFNDISQDWRLRHFVGWVWYEREVI 106
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAFKLD---RENCGIDQRWWESALPE---SRAMAVPGSFNDQFADADIRNYVGDVWYQREVF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 107 LPERWTQDlrtRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGplpSRLRITIAINNTLTPTTLPPGti 186
Cdd:PRK10150  75 IPKGWAGQ---RIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAG---KSVRITVCVNNELNWQTLPPG-- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 187 QYLTDTSKYPKgyfvQNTYFDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQD--SGLVNYQISVKGsNLFKLEVRLLD 264
Cdd:PRK10150 147 NVIEDGNGKKK----QKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDlnHASVDWSVETNG-DVDSVSVTLRD 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 265 AENKVVANGTGTQGQLKVPGVSLWWPylMHerpAYLYSLEVQLTAQtslGPVSDFYTLPVGIRTVAVTKSQFLINGKPFY 344
Cdd:PRK10150 222 ADGQVVATGQGTSGTLQVVNPHLWQP--GE---GYLYTLCVELAKS---GTECDTYPLRFGIRSVAVKGGQFLINGKPFY 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 345 FHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECPGVGLAL---------- 414
Cdd:PRK10150 294 FKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVGLNLsfgagleagn 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 415 -------PQFFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNY 487
Cdd:PRK10150 374 kpketysEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 488 AADKG--APYVDVICLNSYYSWYHDYGHLELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQKSL 565
Cdd:PRK10150 454 TPDTDtvSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCAF 533
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 268834192 566 LEQYHLGLDqkRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFTRQRQPKSAAFLLRERYWKIAN 631
Cdd:PRK10150 534 LDMYHRVFD--RVPAVVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGIPF 597
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
329-631 3.87e-153

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 443.81  E-value: 3.87e-153
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  329 VAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECP 408
Cdd:pfam02836   1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  409 GVGLALPQFF------------NNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPashleSAGYYLKMVIAHTKSLDPS 476
Cdd:pfam02836  81 LETHGLWQKFgeiepsyseltdNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNES-----GAGENIAAMYAATKSLDPT 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  477 RPVTFVSNSnyaadkGAPYVDVICLNSYYSWYHDYGHLELIqlqlATQFENWYKKYQKPIIQSEYGAETIA--GFHQDPP 554
Cdd:pfam02836 156 RPVHYEGVG------IDPEVDDIILDIYSRMYEDYGHPEVI----EKYLEDWYKKPQKPIIICEYGHAMGNspGGLQEYQ 225
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 268834192  555 LMFT--EEYQKSLLEQYHLGLDQKRRKYVVGELIWNFADFMTEQSPTRVLGNkkGIFTRQRQPKSAAFLLRERYWKIAN 631
Cdd:pfam02836 226 DLFYkyPEYQGGFIWDWHDQGIQKRDPNVGGEWYWYGGDFGDRPSDYRFCGN--GLFFADRTPKPALFELKKRYWPIKI 302
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
43-626 1.50e-104

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 330.95  E-value: 1.50e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  43 GLWSFRADFSDNrrrgfeeqwYRRPLWESGPTVDMPVPSSFND------ISQDWRLRHFVGWVWYEREVILPERWTQDlr 116
Cdd:COG3250    1 GGWKFRLGDAPE---------GAKPDFDDSGWDPITVPGDWELdlyglpDPFVGPWYLYNGVGWYRRTFTVPASWKGK-- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 117 tRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGplpsRLRITIAINNTLTPTTLPPGtiqyltdtskyp 196
Cdd:COG3250   70 -RVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPG----ENVLAVRVDNPSDGSYLEGQ------------ 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 197 kgyfvqntyfDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNL--FKLEVRLLDAENKVVANGT 274
Cdd:COG3250  133 ----------DWWRTSGIYRDVWLEATPKVHIEDVFVTPDLDDGSATLTVEVELENESDagVTVEVTLLDADGKVVATAT 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 275 GT-----------QGQLKVPGVSLWWPylmhERPaYLYSLEVQLTAQtslGPVSDFYTLPVGIRTVAVTKS-QFLINGKP 342
Cdd:COG3250  203 AKvtlaageentvTLTLTVPNPKLWSP----EDP-NLYTLVVTLKDD---GKVVDTVSTRFGFRTIEIDGDgGFLLNGKP 274
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 343 FYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVVIDECP----GVGLALPQFF 418
Cdd:COG3250  275 VFLKGVNRHEDWPDDGRAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPfewhGMLGDDPEFL 354
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 419 NNvslhhHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYlkmviAHTKSLDPSRPVtfvsnsnyaadkgapyvdv 498
Cdd:COG3250  355 EA-----VEAELREMVRRDRNHPSIILWSGGNESGGGPNFAALY-----EWVKELDPTRPV------------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 499 iclnsyyswyhdyghleliqlqlatqfenwykkyqkpIIQSEYGA---ETIAGFHQDPPlmFTEEYQKSLLEQYHLGLdQ 575
Cdd:COG3250  406 -------------------------------------RFLSEYGHampNSLGGGYHQPS--DFEEYQALQALEEYWEA-F 445
                        570       580       590       600       610
                 ....*....|....*....|....*....|....*....|....*....|..
gi 268834192 576 KRRKYVVGELIWNFADFMTEQSPTRVLGNKKGIFT-RQRQPKSAAFLLRERY 626
Cdd:COG3250  446 RRRPRLAGGFIWQLNDYWPEPRDNDGNFCSWGLVDyYDRTPKPAYYEVKSAW 497
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
101-542 3.14e-38

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 152.14  E-value: 3.14e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  101 YEREVILPERWtqdLRTRVVLRIGSAHSYAIVWVNGvdtleHEGGY-----LPFEADISNLVQVGPlpsrlritiainNT 175
Cdd:PRK10340  113 YQRTFTLSDGW---QGKQTIIKFDGVETYFEVYVNG-----QYVGFskgsrLTAEFDISAMVKTGD------------NL 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  176 LTPTTLPPGTIQYLTDTskypkgyfvqntyfDFFNYAGLQRSVLLYTTPTTYIDDITVTTSVEQDSGLVNYQISVKGSNL 255
Cdd:PRK10340  173 LCVRVMQWADSTYLEDQ--------------DMWWLAGIFRDVYLVGKPLTHINDFTVRTDFDEDYCDATLSCEVVLENL 238
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  256 ------FKLEVRLLDAENKV---------VANGTGTQGQLKVPGVSLWwpylMHERPaYLYSLevQLTAQTSLGPVSDFY 320
Cdd:PRK10340  239 aaspvvTTLEYTLFDGERVVhssaidhlaIEKLTSASFAFTVEQPQQW----SAESP-YLYHL--VMTLKDANGNVLEVV 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  321 TLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYG 400
Cdd:PRK10340  312 PQRVGFRDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYG 391
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  401 IVVIDEC--PGVGLALPQFFNNVS-----LHHHMQVMEEVVRRDKNHPAVVMWSVANEPAshlesAGYYLKMVIAHTKSL 473
Cdd:PRK10340  392 LFVMAETdvESHGFANVGDISRITddpqwEKVYVDRIVRHIHAQKNHPSIIIWSLGNESG-----YGCNIRAMYHAAKAL 466
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  474 DPSRPVtfvsnsNYAADKGAPYVDVIclNSYYSWyhdyghleliqLQLATQF-ENwykKYQKPIIQSEYG 542
Cdd:PRK10340  467 DDTRLV------HYEEDRDAEVVDVI--STMYTR-----------VELMNEFgEY---PHPKPRILCEYA 514
lacZ PRK09525
beta-galactosidase;
31-479 3.50e-36

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 145.84  E-value: 3.50e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192   31 QESPSRECKELDGLWSFrADFSdnRRRGFEEQWYRRPLWESGPtvdMPVPSsfndisqDWRLRHF--------------- 95
Cdd:PRK09525   45 DDRPSQQRQSLNGEWRF-SYFP--APEAVPESWLECDLPDADT---IPVPS-------NWQLHGYdapiytnvtypipvn 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192   96 ---------VGWvwYEREVILPERWTQDLRTRVVLR-IGSA-HsyaiVWVNGvdtleHEGGY-----LPFEADISNLVQV 159
Cdd:PRK09525  112 ppfvpeenpTGC--YSLTFTVDESWLQSGQTRIIFDgVNSAfH----LWCNG-----RWVGYsqdsrLPAEFDLSPFLRA 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  160 GplpsrlritiaiNNTLTPTTLppgtiqyltdtsKYPKGyfvqnTYF---DFFNYAGLQRSVLLYTTPTTYIDDITVTT- 235
Cdd:PRK09525  181 G------------ENRLAVMVL------------RWSDG-----SYLedqDMWRMSGIFRDVSLLHKPTTQLSDFHITTe 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  236 -SVEQDSGLVNYQISVKGSNL--FKLEVRLLDAENKVvANGTGTQGQ----------------LKVPGVSLWwpylMHER 296
Cdd:PRK09525  232 lDDDFRRAVLEVEAQVNGELRdeLRVTVQLWDGETLV-ASGTAPFGTeiidergayadrvtlrLNVENPKLW----SAET 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  297 PaYLYSLEVQL-TAQtslGPVSDFYTLPVGIRTVAVTKSQFLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRW 375
Cdd:PRK09525  307 P-NLYRAVVSLlDAD---GTLIEAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQ 382
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  376 LGANAFRTSHYPYAEEVMQMCDRYGIVVIDEC--------PGVGLA-----LPQFfnnvslhhhMQVMEEVVRRDKNHPA 442
Cdd:PRK09525  383 HNFNAVRCSHYPNHPLWYELCDRYGLYVVDEAniethgmvPMNRLSddprwLPAM---------SERVTRMVQRDRNHPS 453
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|
gi 268834192  443 VVMWSVANEP---ASHleSAGYylkmviAHTKSLDPSRPV 479
Cdd:PRK09525  454 IIIWSLGNESghgANH--DALY------RWIKSNDPSRPV 485
GalB NF041463
beta-galactosidase GalB;
97-540 1.54e-35

beta-galactosidase GalB;


Pssm-ID: 469351 [Multi-domain]  Cd Length: 799  Bit Score: 143.51  E-value: 1.54e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  97 GWVWYEREVILPERwtqDLRTRVVLRIGSAHSYAIVWVNGvdtleHE-G----GYLPFEADISNLVQVGplpSRLRITIA 171
Cdd:NF041463  64 GVAWYRKKLDIPAS---DAGKSIFLDIDGAMSYAMVWLNG-----QLvGgwpyGYNSWRLDLTPYLKPG---GENQLAIR 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 172 INNtltpttlPPgtiqyltDTSK-YPKGyfvqntyfdffnyaGLQRSVLLYTTPTTYIDD--ITVTTS-VEQDSGLVNYQ 247
Cdd:NF041463 133 LDN-------PP-------ESSRwYPGG--------------GLYRNVWLTKTNPVHVAQwgTFVTTPeVSADSATVDLA 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 248 ISVKGSNLFKLEVRL------LDAENK---------------VVANGTGT-QGQLKVPGVSLWWPYLMHERpaYLYSLEV 305
Cdd:NF041463 185 VTVDNDSAADADVEVsteiyaLDADGKrtgkavarfapasltVAAGESATvSGSLTIANPRLWGPPPTQTP--NRYVAVT 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 306 QLTAQtslGPVSDFYTLPVGIRTVAVTKSQ-FLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTS 384
Cdd:NF041463 263 TVYQG---GKVVDRYETPFGIRSLRFDPDRgVLVNGEHIRLQGVNQHHDLGALGAAFNVRAAERQLEILREMGCNAIRMA 339
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 385 HYPYAEEVMQMCDRYGIVVIDE---------CP-GVGLALPQFfnnvslhhHMQVMEEVVRRDKNHPAVVMWSVANE-PA 453
Cdd:NF041463 340 HNPPAPELLELTDRMGFLVVDEifdswerkkTPlDFHLIFPDW--------HEQDLRAMIRRDRNHPSVIMWSIGNEvGE 411
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 454 SHLESAGYYL-KMVIAHTKSLDPSRPVTfvSNSNYAADkGAPY---VDVICLNsyyswYH--------DYGHLELIqlQL 521
Cdd:NF041463 412 QYTGEAGAAIaRRLHDIVKEEDPTRPTT--ASMNYAKP-DMPFpavMDVISLN-----YQgegirdapAYEGLKGI--RT 481
                        490       500
                 ....*....|....*....|
gi 268834192 522 ATQFENWYKKY-QKPIIQSE 540
Cdd:NF041463 482 PPLYPAFHAKFpDKVILSSE 501
Glyco_hydro_2_N pfam02837
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ...
39-224 2.74e-19

Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.


Pssm-ID: 397120 [Multi-domain]  Cd Length: 169  Bit Score: 85.37  E-value: 2.74e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192   39 KELDGLWSFRADfsdNRRRGFEEQWYRRPLWESGPTVdmpVPSSFNDIS-----------QDWRLRHFVGWVWYEREVIL 107
Cdd:pfam02837   2 KSLNGEWAFALF---DAPCGAPQSWWESALQESRTIA---VPSSWNDQPiytnveypidfADPFIPTYNGTGWYQRTFFI 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  108 PERWTQDlrtRVVLRIGSAHSYAIVWVNGVDTLEHEGGYLPFEADISNLVQVGplpsrlritiaiNNTLTPTTLPPGTIQ 187
Cdd:pfam02837  76 PSKWAGQ---RIRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVIAG------------KNRIAVKVLNWSDG* 140
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 268834192  188 YLTDTSKYPKGyfvqntyfDFFNYAGLQRSVLLYTTP 224
Cdd:pfam02837 141 YIEDQNGKYFH--------DFWNYSGIYRDVSLLTTP 169
COG3934 COG3934
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism];
338-624 3.59e-17

Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism];


Pssm-ID: 443135 [Multi-domain]  Cd Length: 331  Bit Score: 83.09  E-value: 3.59e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 338 INGKPFYFHGVNKHEDADIRGKGFDWPL--LVKDFNLLRWLGANAFRTshYPYAEEVMQMCDRY------GIV-VIDECP 408
Cdd:COG3934    1 LDGKPYFFLGVNYWPRAGGFHMWRDWDPdrVRRELDDLAALGLDVVRV--FLLWEDFQPNPGLIneealeRLDyFLDAAA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 409 GVGL-ALPQFFNN---------------VSLHHHMQV-------------MEEVVRRDKNHPAVVMWSVANEP-----AS 454
Cdd:COG3934   79 ERGLkVVLTLFNNwwsghmsgynwlpswVGGWHRRNFytdpeaveaqkayVRTLANRYKDDPAILGWELGNEPrnfgdPA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 455 HLESAGYYLKMVIAHTKSLDPSRPVT--------FVSNSNYAADKGAPYVDVICLNSY---YSWYHDYGHLE----LIQL 519
Cdd:COG3934  159 SPEAALAWLREMAAAIKSLDPNHLVSsgdegdywEVDDHPFVPAHAAPLIDYLTVHLYpfnWGWVDRPRSTDkaayLIEL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192 520 qlatqfenwYKKYQKPIIQSEYGAETIAgfhqdppLMFTEEYQKSLLEQ-YHLGLDQKRrkyVVGELIWNFADFMTEQSP 598
Cdd:COG3934  239 ---------ARALGKPVVLEEFGAPRDS-------PQASEEDRAEFYRTvLEAALTLAG---AAGANWWCFHDFDDLGDP 299
                        330       340
                 ....*....|....*....|....*.
gi 268834192 599 TRVLGNKKGIFTRQRQPKSAAFLLRE 624
Cdd:COG3934  300 PYEDQPLFGLFDSDGRPKPTAEVIRE 325
Glyco_hydro_2 pfam00703
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ...
226-327 2.13e-10

Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 395572 [Multi-domain]  Cd Length: 106  Bit Score: 58.26  E-value: 2.13e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 268834192  226 TYIDDITVTTSVEQD-SGLVNYQISVKGSNLFKLEVRLLD-----------AENKVVANGTGTQGQLKVPGVSLWWPylm 293
Cdd:pfam00703   1 VHIEDVFITPDLDDDkTAKVTVEVELENDGDASVEVTLETeikdadgktvaAAAKVLVLGAGETTELEVKNPKLWSP--- 77
                          90       100       110
                  ....*....|....*....|....*....|....
gi 268834192  294 hERPaYLYSLEVQLTAQtslGPVSDFYTLPVGIR 327
Cdd:pfam00703  78 -ETP-NLYTLTVELDKD---GKVIDEVSTRFGFR 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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