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Conserved domains on  [gi|982711400|gb|KWT29615|]
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hypothetical protein AL042_10195 [Pseudomonas amygdali pv. aesculi]

Protein Classification

DUF1206 domain-containing protein( domain architecture ID 10535513)

DUF1206 domain-containing protein similar to Bacillus subtilis YxxB

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1206 pfam06724
Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane ...
 186-255 4.80e-09

Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.


:

Pssm-ID: 461995  Cd Length: 70  Bit Score: 51.66  E-value: 4.80e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 982711400  186 FGLIARGVAFIEIAVLLAVSGSSYQAMHPPGMKDALNGLQDLPAGGLVLLIVALGLIAFSVYSFAQAAWR 255
Cdd:pfam06724   1 AGYAARGVVYLLLGVLALQAALGGGGSEAGGLDGALATLLAQPFGRWLLGLVGLGLVGYGLYQLVKARYR 70
DUF1206 pfam06724
Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane ...
 14-80 4.12e-05

Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.


:

Pssm-ID: 461995  Cd Length: 70  Bit Score: 40.87  E-value: 4.12e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 982711400   14 GYAARGVVYLIIGLFAVLAAQGS--SQPADSHSSLEALLSQPFGSVLVGVVIVGLLAFAAWRVLQATRD 80
Cdd:pfam06724   2 GYAARGVVYLLLGVLALQAALGGggSEAGGLDGALATLLAQPFGRWLLGLVGLGLVGYGLYQLVKARYR 70
 
Name Accession Description Interval E-value
DUF1206 pfam06724
Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane ...
 186-255 4.80e-09

Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.


Pssm-ID: 461995  Cd Length: 70  Bit Score: 51.66  E-value: 4.80e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 982711400  186 FGLIARGVAFIEIAVLLAVSGSSYQAMHPPGMKDALNGLQDLPAGGLVLLIVALGLIAFSVYSFAQAAWR 255
Cdd:pfam06724   1 AGYAARGVVYLLLGVLALQAALGGGGSEAGGLDGALATLLAQPFGRWLLGLVGLGLVGYGLYQLVKARYR 70
DUF1206 pfam06724
Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane ...
 14-80 4.12e-05

Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.


Pssm-ID: 461995  Cd Length: 70  Bit Score: 40.87  E-value: 4.12e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 982711400   14 GYAARGVVYLIIGLFAVLAAQGS--SQPADSHSSLEALLSQPFGSVLVGVVIVGLLAFAAWRVLQATRD 80
Cdd:pfam06724   2 GYAARGVVYLLLGVLALQAALGGggSEAGGLDGALATLLAQPFGRWLLGLVGLGLVGYGLYQLVKARYR 70
 
Name Accession Description Interval E-value
DUF1206 pfam06724
Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane ...
 186-255 4.80e-09

Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.


Pssm-ID: 461995  Cd Length: 70  Bit Score: 51.66  E-value: 4.80e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 982711400  186 FGLIARGVAFIEIAVLLAVSGSSYQAMHPPGMKDALNGLQDLPAGGLVLLIVALGLIAFSVYSFAQAAWR 255
Cdd:pfam06724   1 AGYAARGVVYLLLGVLALQAALGGGGSEAGGLDGALATLLAQPFGRWLLGLVGLGLVGYGLYQLVKARYR 70
DUF1206 pfam06724
Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane ...
 14-80 4.12e-05

Domain of Unknown Function (DUF1206); This region consists of two a pair of transmembrane helices and occurs three times in each of the family member proteins.


Pssm-ID: 461995  Cd Length: 70  Bit Score: 40.87  E-value: 4.12e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 982711400   14 GYAARGVVYLIIGLFAVLAAQGS--SQPADSHSSLEALLSQPFGSVLVGVVIVGLLAFAAWRVLQATRD 80
Cdd:pfam06724   2 GYAARGVVYLLLGVLALQAALGGggSEAGGLDGALATLLAQPFGRWLLGLVGLGLVGYGLYQLVKARYR 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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