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Conserved domains on  [gi|948283836|gb|KRH98101|]
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polysaccharide pyruvyl transferase CsaB [Cylindrospermopsis sp. CR12]

Protein Classification

polysaccharide pyruvyl transferase family protein( domain architecture ID 10022700)

polysaccharide pyruvyl transferase family protein may be involved in peptidoglycan-associated polymer biosynthesis; similar to Acanthamoeba polyphaga mimivirus uncharacterized protein L143

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
S_layer_CsaB TIGR03609
polysaccharide pyruvyl transferase CsaB; The CsaB protein (cell surface anchoring B) of ...
3-300 5.46e-141

polysaccharide pyruvyl transferase CsaB; The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking]


:

Pssm-ID: 132648  Cd Length: 298  Bit Score: 401.25  E-value: 5.46e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836    3 VLLSGYYGKGNGGDEALLATLLQMLPPHITPVVLSGSPQLTTTHYGVESHDRMAFIPLIRALRSCQGFIWGGGSLMQDAT 82
Cdd:TIGR03609   1 ALLCGYYGFGNLGDEALLAALLRELPPGVEPTVLSNDPAETAKLYGVEAVNRRSLLAVLRALRRADVVIWGGGSLLQDVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   83 SSINPLYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPHILAPDPVWGLA 162
Cdd:TIGR03609  81 SFRSLLYYLGLMRLARLFGKPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKRLGIPAELAADPVWLLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  163 SESVPELAGLPKPRIAVTLRKHPQLTQDRLANLIRGLVDLQKHTQAFILILPFQKTEDLEIAQQIHSQLPNNSQVFCLDK 242
Cdd:TIGR03609 161 PEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLD 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 948283836  243 PQILKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDPKINRLMEDLPIPGWNLPDL 300
Cdd:TIGR03609 241 PEELLGLFASARLVIGMRLHALILAAAAGVPFVALSYDPKVRAFAADAGVPGFELAAL 298
 
Name Accession Description Interval E-value
S_layer_CsaB TIGR03609
polysaccharide pyruvyl transferase CsaB; The CsaB protein (cell surface anchoring B) of ...
3-300 5.46e-141

polysaccharide pyruvyl transferase CsaB; The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 132648  Cd Length: 298  Bit Score: 401.25  E-value: 5.46e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836    3 VLLSGYYGKGNGGDEALLATLLQMLPPHITPVVLSGSPQLTTTHYGVESHDRMAFIPLIRALRSCQGFIWGGGSLMQDAT 82
Cdd:TIGR03609   1 ALLCGYYGFGNLGDEALLAALLRELPPGVEPTVLSNDPAETAKLYGVEAVNRRSLLAVLRALRRADVVIWGGGSLLQDVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   83 SSINPLYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPHILAPDPVWGLA 162
Cdd:TIGR03609  81 SFRSLLYYLGLMRLARLFGKPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKRLGIPAELAADPVWLLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  163 SESVPELAGLPKPRIAVTLRKHPQLTQDRLANLIRGLVDLQKHTQAFILILPFQKTEDLEIAQQIHSQLPNNSQVFCLDK 242
Cdd:TIGR03609 161 PEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLD 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 948283836  243 PQILKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDPKINRLMEDLPIPGWNLPDL 300
Cdd:TIGR03609 241 PEELLGLFASARLVIGMRLHALILAAAAGVPFVALSYDPKVRAFAADAGVPGFELAAL 298
WcaK COG2327
Polysaccharide pyruvyl transferase family protein WcaK (colanic acid biosynthesis) [Cell wall ...
1-345 1.62e-113

Polysaccharide pyruvyl transferase family protein WcaK (colanic acid biosynthesis) [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441900 [Multi-domain]  Cd Length: 357  Bit Score: 333.56  E-value: 1.62e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   1 MRVLLSGYYGKGNGGDEALLATLLQMLP---PHITPVVLSGSPQLTTTHYGVESHDRMAFIPLIRALRSCQGFIWGGGSL 77
Cdd:COG2327    1 MKILLSGYYGFGNLGDEALLEALLQLLRkrlPDAEITVLSGNPEETRKRYGVRAVPRRNFLEILRALRRADLVISGGGGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  78 MQDATSSINPLYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPH---ILA 154
Cdd:COG2327   81 LQDVTSLRSLLYYLGLVLLAKLLGKPVVIYGQGIGPFKSPLSRRLLRRVLNRADLISVRDEASAELLKDLGVKKppiELT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836 155 PDPVWGLASESVPELAGLPKPRIAVTLRKHPQLTQDRLANLIRGLVDLQKHTQAFILILPFQKTE--DLEIAQQIHSQLP 232
Cdd:COG2327  161 PDPAFLLPPEPVDKEAPLERPVVGVNLRPWRGLEEDYLEALAAALDRLIERTGYKVVLLPHQYGQedDLAIAEELAAKLK 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836 233 NNSQVFCLDK-PQILKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDPKINRLMEDLPIPGWNLPDLPDDPNLIAKTW 311
Cdd:COG2327  241 ERVVVLDEELdPDELLSLIARADLVIGMRLHALIFALSAGVPVIALSYDPKVRGLMEDLGLPDYVLDLDDLDPEELLAAV 320
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 948283836 312 LDFYHNTESLS---RDKLQSLLDGSLLHRDLLYRVFS 345
Cdd:COG2327  321 EELLANREELReklAEKLAELRARARENLELLLKLLK 357
PS_pyruv_trans pfam04230
Polysaccharide pyruvyl transferase; Pyruvyl-transferases involved in peptidoglycan-associated ...
13-281 2.23e-26

Polysaccharide pyruvyl transferase; Pyruvyl-transferases involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora.


Pssm-ID: 427804  Cd Length: 233  Bit Score: 104.64  E-value: 2.23e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   13 NGGDEALLATLLQMLP---PHITPVVLSGSPQLTTTHYGV--ESHDRMAFIPLIRALRSCQGFIWGGGSLMQDatSSINP 87
Cdd:pfam04230   1 NYGDELILEALLKLLKklgPDAEIIVLSPDPDETKKRLSDkrSKKLKLLKKLLKLLDKADDVIIVGGGLGNLG--DLYKL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   88 LYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPH--ILAPDPVWGLASES 165
Cdd:pfam04230  79 LIYLRLAFVAKKLGKPVILLGQGIGPFLNEALRKLLKKILSKADLISVRDELSYELLEKLGIKEnvELVPDPAFLLDKLP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  166 VPELAGLPKPRIAvtlrkhpqltqdrlanlirglvdlqkhtqafililpfqkteDLEIAQQIHSQLPNNSQVFCLDKPQI 245
Cdd:pfam04230 159 PKEIKKKPKKDYI-----------------------------------------SIAKSSKKDLEDLNEKLALLYDLPEE 197
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 948283836  246 LKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDP 281
Cdd:pfam04230 198 LLSLISQADFVITTRLHGLILALLFGVPFIVIAYDS 233
 
Name Accession Description Interval E-value
S_layer_CsaB TIGR03609
polysaccharide pyruvyl transferase CsaB; The CsaB protein (cell surface anchoring B) of ...
3-300 5.46e-141

polysaccharide pyruvyl transferase CsaB; The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 132648  Cd Length: 298  Bit Score: 401.25  E-value: 5.46e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836    3 VLLSGYYGKGNGGDEALLATLLQMLPPHITPVVLSGSPQLTTTHYGVESHDRMAFIPLIRALRSCQGFIWGGGSLMQDAT 82
Cdd:TIGR03609   1 ALLCGYYGFGNLGDEALLAALLRELPPGVEPTVLSNDPAETAKLYGVEAVNRRSLLAVLRALRRADVVIWGGGSLLQDVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   83 SSINPLYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPHILAPDPVWGLA 162
Cdd:TIGR03609  81 SFRSLLYYLGLMRLARLFGKPVILWGQGIGPLRRRLSRWLVRRVLRGCRAISVRDAASYRLLKRLGIPAELAADPVWLLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  163 SESVPELAGLPKPRIAVTLRKHPQLTQDRLANLIRGLVDLQKHTQAFILILPFQKTEDLEIAQQIHSQLPNNSQVFCLDK 242
Cdd:TIGR03609 161 PEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLD 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 948283836  243 PQILKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDPKINRLMEDLPIPGWNLPDL 300
Cdd:TIGR03609 241 PEELLGLFASARLVIGMRLHALILAAAAGVPFVALSYDPKVRAFAADAGVPGFELAAL 298
WcaK COG2327
Polysaccharide pyruvyl transferase family protein WcaK (colanic acid biosynthesis) [Cell wall ...
1-345 1.62e-113

Polysaccharide pyruvyl transferase family protein WcaK (colanic acid biosynthesis) [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441900 [Multi-domain]  Cd Length: 357  Bit Score: 333.56  E-value: 1.62e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   1 MRVLLSGYYGKGNGGDEALLATLLQMLP---PHITPVVLSGSPQLTTTHYGVESHDRMAFIPLIRALRSCQGFIWGGGSL 77
Cdd:COG2327    1 MKILLSGYYGFGNLGDEALLEALLQLLRkrlPDAEITVLSGNPEETRKRYGVRAVPRRNFLEILRALRRADLVISGGGGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  78 MQDATSSINPLYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPH---ILA 154
Cdd:COG2327   81 LQDVTSLRSLLYYLGLVLLAKLLGKPVVIYGQGIGPFKSPLSRRLLRRVLNRADLISVRDEASAELLKDLGVKKppiELT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836 155 PDPVWGLASESVPELAGLPKPRIAVTLRKHPQLTQDRLANLIRGLVDLQKHTQAFILILPFQKTE--DLEIAQQIHSQLP 232
Cdd:COG2327  161 PDPAFLLPPEPVDKEAPLERPVVGVNLRPWRGLEEDYLEALAAALDRLIERTGYKVVLLPHQYGQedDLAIAEELAAKLK 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836 233 NNSQVFCLDK-PQILKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDPKINRLMEDLPIPGWNLPDLPDDPNLIAKTW 311
Cdd:COG2327  241 ERVVVLDEELdPDELLSLIARADLVIGMRLHALIFALSAGVPVIALSYDPKVRGLMEDLGLPDYVLDLDDLDPEELLAAV 320
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 948283836 312 LDFYHNTESLS---RDKLQSLLDGSLLHRDLLYRVFS 345
Cdd:COG2327  321 EELLANREELReklAEKLAELRARARENLELLLKLLK 357
PS_pyruv_trans pfam04230
Polysaccharide pyruvyl transferase; Pyruvyl-transferases involved in peptidoglycan-associated ...
13-281 2.23e-26

Polysaccharide pyruvyl transferase; Pyruvyl-transferases involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora.


Pssm-ID: 427804  Cd Length: 233  Bit Score: 104.64  E-value: 2.23e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   13 NGGDEALLATLLQMLP---PHITPVVLSGSPQLTTTHYGV--ESHDRMAFIPLIRALRSCQGFIWGGGSLMQDatSSINP 87
Cdd:pfam04230   1 NYGDELILEALLKLLKklgPDAEIIVLSPDPDETKKRLSDkrSKKLKLLKKLLKLLDKADDVIIVGGGLGNLG--DLYKL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836   88 LYYGGLMALAQFMGLKTIAWGQGIGPLSLPQNRWLAQRNFAGCLGVSVRDRSSAGLLSGWHIPH--ILAPDPVWGLASES 165
Cdd:pfam04230  79 LIYLRLAFVAKKLGKPVILLGQGIGPFLNEALRKLLKKILSKADLISVRDELSYELLEKLGIKEnvELVPDPAFLLDKLP 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 948283836  166 VPELAGLPKPRIAvtlrkhpqltqdrlanlirglvdlqkhtqafililpfqkteDLEIAQQIHSQLPNNSQVFCLDKPQI 245
Cdd:pfam04230 159 PKEIKKKPKKDYI-----------------------------------------SIAKSSKKDLEDLNEKLALLYDLPEE 197
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 948283836  246 LKGAFRGVNMVIGMRLHSLIMAASEGCRCFALSYDP 281
Cdd:pfam04230 198 LLSLISQADFVITTRLHGLILALLFGVPFIVIAYDS 233
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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