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Conserved domains on  [gi|838961996|gb|KLZ43005|]
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major type 1 subunit fimbrin (pilin) [Klebsiella pneumoniae]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
33-193 7.14e-38

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 128.62  E-value: 7.14e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  33 SGTSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVT-TVAVLFDGARD 111
Cdd:COG3539   15 SAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSnSVKVTFTGTAD 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 112 QSDNSLLAIN--GGASGVAIKLYEHDrSTAVSLGKTSAKQTVTPgtsggTGSADLEFYADYISTAATVTAGKADGTANFN 189
Cdd:COG3539   95 SANPGLLANTgsGGASGVGIQLLDSD-GTPIPLGTPSSAVTLTS-----NGSATLPFYARYVATGATVTAGSFNATATFT 168


                 ....
gi 838961996 190 MIYN 193
Cdd:COG3539  169 IDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
33-193 7.14e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 128.62  E-value: 7.14e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  33 SGTSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVT-TVAVLFDGARD 111
Cdd:COG3539   15 SAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSnSVKVTFTGTAD 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 112 QSDNSLLAIN--GGASGVAIKLYEHDrSTAVSLGKTSAKQTVTPgtsggTGSADLEFYADYISTAATVTAGKADGTANFN 189
Cdd:COG3539   95 SANPGLLANTgsGGASGVGIQLLDSD-GTPIPLGTPSSAVTLTS-----NGSATLPFYARYVATGATVTAGSFNATATFT 168


                 ....
gi 838961996 190 MIYN 193
Cdd:COG3539  169 IDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 40-192 5.17e-23

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 90.79  E-value: 5.17e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  40 AGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVTTVAVLFDGARDQSDNSLLA 119
Cdd:PRK15289  24 EDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLK 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 120 I----NGG-------------ASGVAIKLYEHDRSTAVSLGKTSAKQTVTpgtsgGTGSADLEFYADYISTAATVTAGKA 182
Cdd:PRK15289 104 VgtplTAGnpgdftgtgqaiaATGVGIRIFNQSDNSQVKLYNDSAYTAID-----AEGKAEMKFIARYVATNATVTAGTA 178

                        170
                 ....*....|
gi 838961996 183 DGTANFNMIY 192
Cdd:PRK15289 179 NADSQFTVEY 188
Fimbrial pfam00419
Fimbrial protein;
44-193 8.53e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 60.14  E-value: 8.53e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996   44 VIFNGSIT--DSSCNVDSSSNgQKVDLGKWASNYFTGTGFETTKTPFHIKVK-DCPASVTTVAVLFDGARDQSDNSLLAI 120
Cdd:pfam00419   1 INFTGTVTrvPATCKITAGTP-IEVDFGQIPVNELNAGGEGSRQKPFSITLEcSSGSSAVKVTVGLFGTADASSPNLLLT 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 838961996  121 NGGAS---GVAIKLYEHDrSTAVSLGKTSAKqtvTPGTSGGTGSADLEFYADYISTAA-TVTAGKADGTANFNMIYN 193
Cdd:pfam00419  80 GNGAGaatGVGIRLYDAN-GGALPPNNGTSS---IPVSATAAVATGITFTASLVATTGgTPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
33-193 7.14e-38

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 128.62  E-value: 7.14e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  33 SGTSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVT-TVAVLFDGARD 111
Cdd:COG3539   15 SAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSnSVKVTFTGTAD 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 112 QSDNSLLAIN--GGASGVAIKLYEHDrSTAVSLGKTSAKQTVTPgtsggTGSADLEFYADYISTAATVTAGKADGTANFN 189
Cdd:COG3539   95 SANPGLLANTgsGGASGVGIQLLDSD-GTPIPLGTPSSAVTLTS-----NGSATLPFYARYVATGATVTAGSFNATATFT 168


                 ....
gi 838961996 190 MIYN 193
Cdd:COG3539  169 IDYQ 172
lpfA PRK15289
fimbrial protein; Provisional
 40-192 5.17e-23

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 90.79  E-value: 5.17e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  40 AGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVTTVAVLFDGARDQSDNSLLA 119
Cdd:PRK15289  24 EDGVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAPGGDGDLK 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 120 I----NGG-------------ASGVAIKLYEHDRSTAVSLGKTSAKQTVTpgtsgGTGSADLEFYADYISTAATVTAGKA 182
Cdd:PRK15289 104 VgtplTAGnpgdftgtgqaiaATGVGIRIFNQSDNSQVKLYNDSAYTAID-----AEGKAEMKFIARYVATNATVTAGTA 178

                        170
                 ....*....|
gi 838961996 183 DGTANFNMIY 192
Cdd:PRK15289 179 NADSQFTVEY 188
PRK09934 PRK09934
fimbriae assembly protein;
7-193 6.48e-23

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 89.95  E-value: 6.48e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996   7 FITILIGTLLSGVALQATAANTINpdsgtssegaggqVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKT 86
Cdd:PRK09934   5 FFACFCGLLWSPLSWAADPLGEIN-------------IELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPV 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  87 PFHIKVKDCPASvtTVAVLFDGArDQSDNSLLAINGG--ASGVAIKLYEHDRSTaVSLGKTSAKQTVTpgtsgGTGSADL 164
Cdd:PRK09934  72 PFSLKLEGCPPG--SASITFTGT-PASDTNLLALDDPamAQTVAIEIRDSDRSR-LALGQASPTVEVD-----ANGNATL 142

                        170       180
                 ....*....|....*....|....*....
gi 838961996 165 EFYADYISTAATVTAGKADGTANFNMIYN 193
Cdd:PRK09934 143 NFYANYIALADGVQPGVAKADATFMINYN 171
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
11-192 5.79e-21

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 85.39  E-value: 5.79e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  11 LIGTLLSGVALQATAANTINPDSGTSSegaGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHI 90
Cdd:PRK15194   5 FISSAIASLLFVAGAAYAADPTPVSVD---GGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  91 KVKDC-PASVTTVAVLFDGARDQSDNSLLAINGG-----ASGVAIKLYEHDRSTAVSLGKT-SAKQTVTPGTSggtgsaD 163
Cdd:PRK15194  82 QLNDCdPVVAATAAVAFSGQADATNDNLLAVASStntttATGVGIEILDNTSSILKPDGATfSANQNLIEGTN------T 155

                        170       180
                 ....*....|....*....|....*....
gi 838961996 164 LEFYADYISTAATVTAGKADGTANFNMIY 192
Cdd:PRK15194 156 LHFSARYKATGTSASAGQANADATFIMKY 184
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 23-193 9.97e-19

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 79.24  E-value: 9.97e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  23 ATAANTINPDSGTSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCP-ASVTT 101
Cdd:PRK15209   7 ALSALALTSTSVFAAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDiTTNKK 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 102 VAVLFDGARDQSDNSLLAIN---GGASGVAIKLYEHDRS-TAVSLGKTSakqtvtpgTSGGTGSADLEFYADYISTAATV 177
Cdd:PRK15209  87 VNVSFNGVGDADDSTLVSVSteaGAATGVGIGIYDNANTlVELNTGKST--------TTLAAGQTVLYFTANYVSTKDTV 158

                        170
                 ....*....|....*.
gi 838961996 178 TAGKADGTANFNMIYN 193
Cdd:PRK15209 159 TTGYGNAEVDFNLSYE 174
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 33-192 4.08e-17

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 74.75  E-value: 4.08e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  33 SGTSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVTTVAVLFDGARDQ 112
Cdd:PRK15191  14 AASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTVSFSGAADS 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 113 SDNSLLAINGG---ASGVAIKLYEHDRsTAVSLGKTSAKQTVTPGTSggtgSADLEFYADYISTAATVTAGKADGTANFN 189
Cdd:PRK15191  94 RNTDLLALTAGesdASGIGIALYDQNK-TLIPLGQESDVVTLSPGQA----SAHLQFYARYLADGGAVTPGDANASATFI 168


                 ...
gi 838961996 190 MIY 192
Cdd:PRK15191 169 LAY 171
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 14-192 5.58e-16

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 71.81  E-value: 5.58e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  14 TLLSGVALQATAANTinpdSGTSSEGAGGQVIFNGSITDSSCNVDSSSngQKVDLGKWASNYFTGTGFETTKTPFHIKVK 93
Cdd:PRK15205   6 ALLPLALLLLTASGM----AAPTDLGPAGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKPVKVGTELNQKNFSIGLK 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  94 DCpASVTTVAVLFDGARDQSDNSLLAIN-GGASGVAIKLyehdrstavslgKTSA-KQTVTPGTSG--------GTGSAD 163
Cdd:PRK15205  80 DC-DGISKASVTMDGSPDPDDPSLFALDaGGATGVALKI------------KTSKgTQQYPKSTDGtpvewainGDGTTQ 146

                        170       180
                 ....*....|....*....|....*....
gi 838961996 164 LEFYADYISTAATVTAGKADGTANFNMIY 192
Cdd:PRK15205 147 LNYIASYVPVNADATVGTANATVNFSVTY 175
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 31-192 6.15e-16

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 72.04  E-value: 6.15e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  31 PDSGTSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVTTVAVLFDGAR 110
Cdd:PRK15190  17 PQINASADDLAYNLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAGAKIWFTGEP 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 111 DQSDNSLLAI--------NGGASGVAIKLYEHDRSTaVSLGKTSAkqTVTPGTSggtGSADLEFYADYISTAATVTAGKA 182
Cdd:PRK15190  97 DPDNPALLAItdtgmgsgNMLASGVGVEILNDDQDT-ISINNADS--VVYPLKA---GRNTLSFYIRYKSTRPTVTSGNA 170

                        170
                 ....*....|
gi 838961996 183 DGTANFNMIY 192
Cdd:PRK15190 171 TAVMYFDMQY 180
Fimbrial pfam00419
Fimbrial protein;
44-193 8.53e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 60.14  E-value: 8.53e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996   44 VIFNGSIT--DSSCNVDSSSNgQKVDLGKWASNYFTGTGFETTKTPFHIKVK-DCPASVTTVAVLFDGARDQSDNSLLAI 120
Cdd:pfam00419   1 INFTGTVTrvPATCKITAGTP-IEVDFGQIPVNELNAGGEGSRQKPFSITLEcSSGSSAVKVTVGLFGTADASSPNLLLT 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 838961996  121 NGGAS---GVAIKLYEHDrSTAVSLGKTSAKqtvTPGTSGGTGSADLEFYADYISTAA-TVTAGKADGTANFNMIYN 193
Cdd:pfam00419  80 GNGAGaatGVGIRLYDAN-GGALPPNNGTSS---IPVSATAAVATGITFTASLVATTGgTPTAGDFNATATIVVDYQ 152
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 23-193 3.13e-10

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 56.64  E-value: 3.13e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  23 ATAANTINPdSGTSSEGAGGQVIFNGSITDSSCNVDSSSngQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASV-TT 101
Cdd:PRK15300  11 ALAAITLSP-AALADTAKDGTVHITGLIKQNACTVKTDS--VEVTLQEEFASLFTAAGQTAGDTDFTIELENCDANVySS 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 102 VAVLFDGARDQSDNSLLAINGGASGVAIKLYEHDRSTAVSLGKTSAKQTVTPGTSGGTGSADLEFYADYISTAATVTAGK 181
Cdd:PRK15300  88 VQARFEGTLDGTDATILKNEDDAENIGVQILDKTSTPMTFNDLQAWSAAVALPTAEGVTELSMPFTARYIATAVPVKSGT 167

                        170
                 ....*....|..
gi 838961996 182 ADGTANFNMIYN 193
Cdd:PRK15300 168 VDATATFYLQYN 179
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
41-192 9.09e-10

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 55.25  E-value: 9.09e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  41 GGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTG-FETTKTPFHIKVKDCPASVT-TVAVLFDGARDQSDNSLL 118
Cdd:PRK15200  26 SGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGsFAPVSVPFSLRLISCSAEVWrHVGIAFAGVTPAEDPHVF 105

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 838961996 119 AING---GASGVAIKLYEHDRSTAVSlgkTSAKQTVTPGTsggTGSADLEFYADYISTAATVTAGKADGTANFNMIY 192
Cdd:PRK15200 106 LASGegiGNAGIGLALFDDQQRQIIP---NTLPLHYAPIL---TSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 41-193 1.82e-09

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 54.44  E-value: 1.82e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  41 GGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGF-ETTKTPFHIKVKDCPASVT-TVAVLFDGARDQSDNSLL 118
Cdd:PRK15187  31 GGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMvANQKEDFTIKLEDCDTQTSqNAAVIFNGQQDANQPGSL 110

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 838961996 119 AINGG---ASGVAIKLYEHDrSTAVSLGKTSAKQTVTPGTSggtgsaDLEFYADYISTaATVTAGKADGTANFNMIYN 193
Cdd:PRK15187 111 ANTAGagsATNVALQLYGPD-GQALNIGESSSTVTLNDGEN------VIPLSVDYIAT-GTATAGNVTATATFSMVYS 180
PRK15210 PRK15210
fimbrial protein;
35-192 4.32e-06

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 45.46  E-value: 4.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  35 TSSEGAGGQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGTGFETTKTPFHIKVKDCP------------ASVTTV 102
Cdd:PRK15210  28 TAGPFGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCAfdpnipdtagsaGKMSKV 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 103 AVLFDGARDQSDNSLLAiNGGASGVAIKLYEHDRSTAVSLGktsakqtvTPGTSGG-----TGSADLEFYADYISTAATV 177
Cdd:PRK15210 108 TVSFSGTANTSKKAYTT-SGSAQHVGVQLLKSDNTSIIEPN--------TPMPDGDaqqlqAGNNELNFFARLIALDNGV 178

                        170
                 ....*....|....*
gi 838961996 178 TAGKADGTANFNMIY 192
Cdd:PRK15210 179 TPGDFNASVTYTLKY 193
PRK15296 PRK15296
fimbrial protein SthA;
10-192 2.28e-05

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 43.16  E-value: 2.28e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  10 ILIGTLLSGVALQATAANTINpdsgtssegaggqviFNGSITDSSCNVDSSSNGQK-VDLGKWASNYFTGTGFETTKTPF 88
Cdd:PRK15296   7 IILAMLTAVASTPVFAQNTIT---------------FNGKIYDQACTVQVNGSTDTtIDLGNYSKERIAEKGATTDYVPF 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  89 HIKVKDCPASVTTVA----VLFDGARDQSD-----NSLLAINGGASGVAIKLYEHDRSTAVSlgkTSAKQTVTPGTSGGT 159
Cdd:PRK15296  72 TVSLVSCPEAGTGVPtqamFRFHGATDDSNptyfkNADEGSETGAAGVGISIQNASHSDVTD---NTDDAAVNLPTDGST 148

                        170       180       190
                 ....*....|....*....|....*....|....
gi 838961996 160 gsADLEFYADYIST-AATVTAGKADGTANFNMIY 192
Cdd:PRK15296 149 --ADFTYYAAMANDgSATVTGGDVSTQVTYTVSY 180
PRK15283 PRK15283
fimbrial major subunit StfA;
42-192 4.40e-05

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 42.45  E-value: 4.40e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  42 GQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTGtGFETTKTPFHIKVKDCP------ASVTTVAVLFDGARDQSDN 115
Cdd:PRK15283  29 GTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMG-GKESSKVDFHIGLENCAfttekeASTVFSAIGNESSANPGSV 107

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 838961996 116 SLLAINGGASGVAIKLYEHDRSTAVSLGKT-SAKQTVTPGTSGGTGSADLEFYADYISTAATVTAGKADGTANFNMIY 192
Cdd:PRK15283 108 ALMRIGGGEMAGSSIVIGNHLGSAIKLGDAySENLTMNGSVAAAKQTLNFKAWVKGDSAASTIDTGEFSSTVNFTISY 185
PRK09733 PRK09733
fimbrial-like protein;
42-192 5.41e-05

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 41.86  E-value: 5.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  42 GQVIFNGSITDSSCNVDSSSNGQKVDLGKWASNYFTgTGFETTKTPFHIKVKDCPASVTT-----VAVLFDGARDQSDNS 116
Cdd:PRK09733  26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLK-SDQKSLAEPFTIHLQDCMLSQGGttyskAKVTFTTANTMTGQS 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 117 LLAIN------GGASGVAIKLYEHDrSTAVSLGktsakQTVTPGTSGGTGSADLEFYADYISTAATVTAGKADGTANFNM 190
Cdd:PRK09733 105 DLLKNtketeiGGATGVGVRILDSQ-SGEVTLG-----TPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKI 178


                 ..
gi 838961996 191 IY 192
Cdd:PRK09733 179 AY 180
PRK15292 PRK15292
type 1 fimbrial protein;
126-193 1.16e-04

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 41.86  E-value: 1.16e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 838961996 126 GVAIKLYEHDRSTAVSLGKTSAKQTVT-PGTSGGTG--SADLEFYADYISTAATVTAGKADGTANFNMIYN 193
Cdd:PRK15292 295 NTKIDLFTSTRTTNADGSQTVSYSYFTnPDSPGGAMnmSTTLKISANYYKTGATVTAGQANATGTLTLTYN 365
PRK15293 PRK15293
fimbrial protein SthD;
48-192 7.30e-04

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 38.89  E-value: 7.30e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  48 GSITDSSCNVDSSSNgqkVDLGKWASNYFTGTGFETTKTPFHIKVKDCPASVTTVAVLFDGARDQSDNSLLAI-----NG 122
Cdd:PRK15293  41 GLIYADPCTVTVPDT---LSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAAISFNGVPYPDPNYASAIyansaAN 117

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996 123 GASGVAIKLYEHDRSTAVSLGKTSakqTVTPGTSGGTGSADLEFYADYISTAATVTAGKADGTANFNMIY 192
Cdd:PRK15293 118 PAQDLGLQLFNLDGKSLVNLANNV---TYTVDINSNTHEANLPVAARMYTPYGKVTAGDFTSVVTITIAW 184
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 13-129 1.42e-03

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 37.75  E-value: 1.42e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  13 GTLLSGVALQATAaNTInpdsgtssEGAGGQVIFNGSITDSSCN-VDSSSNGQKVDLGKWASNYFTGTGfETTKTPFHIK 91
Cdd:PRK15260   9 GHLIGGVMLWAVC-NTL--------PAATPNVHYSGKLVAGACNlVVDNDTMATVDFHTIGSDNFDASG-QTTPVPFTLS 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 838961996  92 VKDCPASVTT-VAVLFDGARDQSDNSLLAINGG--ASGVAI 129
Cdd:PRK15260  79 LQDCKTALANgVLVTFQGVEDSTLPGLLALEPSseASGFAI 119
PRK15307 PRK15307
major fimbrial protein StkA; Provisional
 15-193 1.79e-03

major fimbrial protein StkA; Provisional


Pssm-ID: 185207  Cd Length: 201  Bit Score: 37.71  E-value: 1.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  15 LLSGVALQATAANTINPDSGTSSEGAGGQVIFNGSITDSSCNV----DSSSNGQKVDLG---KWASNYFTGTGFETT--K 85
Cdd:PRK15307   2 FLKKYGLAAAVAMTLSASSAMAADPDTGTITFHGLVTNNTCNIsldnKIDQDGNDFDITlptVFVKDFATALGVNSTlgE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838961996  86 TPFHIKVKDCP-ASVTTVAVLFDGARDQSDNSLLAI------NGGASGVAIKLYeHDRSTAVSLGKTSAKQTVTPGTSGG 158
Cdd:PRK15307  82 KQFTLNLSECDnATLKDASAQFNSWGGSSATSGGLLvppanlQGSATNVNLVLA-NNGNTATDLIKIDQPNNTQKATIST 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 838961996 159 TGSADLEFYADYI------STAATVTAGKADGTANFNMIYN 193
Cdd:PRK15307 161 DGTGDLFYRVAYTqgqkwnADTSPVTSGTVQAQVAFTMIYN 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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