|
Name |
Accession |
Description |
Interval |
E-value |
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
1-283 |
0e+00 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 530.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 1 MAEVTQLKRYDAPRINWGKWFLIGTGVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVN 80
Cdd:PRK11602 1 MAEVTQLKRYDRPPINWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPVN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 81 LVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPF 160
Cdd:PRK11602 81 LVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 161 VVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE 240
Cdd:PRK11602 161 VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE 240
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 838657921 241 LLEQDYNTVGSFTAAALLTLMAILTLFLKSVVQWRLENQEKRQ 283
Cdd:PRK11602 241 LLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRA 283
|
|
| CysW |
COG4208 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
1-282 |
3.09e-172 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 443356 Cd Length: 281 Bit Score: 477.30 E-value: 3.09e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 1 MAEVTQLKRYDAPRiNWGKWFLIGTGVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVN 80
Cdd:COG4208 1 MSSAARARSATTEP-PWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLN 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 81 LVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPF 160
Cdd:COG4208 80 LVFGVAAAWAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 161 VVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE 240
Cdd:COG4208 160 VARELIPLMQEQGTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVE 239
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 838657921 241 LLEQDYNTVGSFTAAALLTLMAILTLFLKSVVQWRLENQEKR 282
Cdd:COG4208 240 ILYNEYNFVAAFAVASLLALLALVTLVLKTLLEWRTARRLAA 281
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
1-275 |
1.93e-124 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 355.89 E-value: 1.93e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 1 MAEVTQLkryDAPRINWGKWFLiGTGVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVN 80
Cdd:TIGR00969 1 MTALPSA---RFRFIKWGKLSL-GIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 81 LVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPF 160
Cdd:TIGR00969 77 GVFGLLIAWVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 161 VVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE 240
Cdd:TIGR00969 157 VVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIE 236
|
250 260 270
....*....|....*....|....*....|....*
gi 838657921 241 LLEQDYNTVGSFTAAALLTLMAILTLFLKSVVQWR 275
Cdd:TIGR00969 237 ERLEQYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
|
|
| permease_CysW |
TIGR02140 |
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ... |
19-275 |
6.05e-121 |
|
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]
Pssm-ID: 162725 Cd Length: 261 Bit Score: 346.68 E-value: 6.05e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 19 KWFLIGTGVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPG 98
Cdd:TIGR02140 2 RYLLISLALGLLFLLLLLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFPG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 99 RQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDE 178
Cdd:TIGR02140 82 KRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQEE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 179 AAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALL 258
Cdd:TIGR02140 162 AALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASLL 241
|
250
....*....|....*..
gi 838657921 259 TLMAILTLFLKSVVQWR 275
Cdd:TIGR02140 242 ALLALVTLVLKAILERR 258
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
14-275 |
6.23e-71 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 219.62 E-value: 6.23e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 14 RINWGKWFLIGTGVLVSAFILVvPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTR 93
Cdd:COG0555 5 VLPGFGLTLGLTLLYLSLIVLL-PLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 94 FNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQG 173
Cdd:COG0555 84 YRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELD 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 174 SHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFT 253
Cdd:COG0555 164 PELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYAGATA 243
|
250 260
....*....|....*....|..
gi 838657921 254 AAALLTLMAILTLFLKSVVQWR 275
Cdd:COG0555 244 IALVLLLISFLLLLLINLLQRR 265
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
32-245 |
6.51e-55 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 177.90 E-value: 6.51e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 32 FILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFA 111
Cdd:CHL00187 23 FLLVLPILALLIKASQQPWSDFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 112 VSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMF 191
Cdd:CHL00187 103 LPTSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTF 182
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 838657921 192 RRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIE-LLEQD 245
Cdd:CHL00187 183 WKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFqSLEQY 237
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
59-268 |
3.04e-51 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 167.92 E-value: 3.04e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 59 DPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEH 138
Cdd:COG4149 2 SPEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEEL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 139 -DLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGE 217
Cdd:COG4149 82 fGISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGE 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 838657921 218 FGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAILTLFL 268
Cdd:COG4149 162 FGATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLL 212
|
|
| permease_CysT |
TIGR02139 |
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ... |
24-277 |
2.14e-47 |
|
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]
Pssm-ID: 131194 Cd Length: 265 Bit Score: 159.41 E-value: 2.14e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 24 GTGVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLL 103
Cdd:TIGR02139 10 GVTLTYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKRIVD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 104 TLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLL 183
Cdd:TIGR02139 90 ALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEKELEEAAASL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 184 GASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAI 263
Cdd:TIGR02139 170 GASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAIASVMLIISF 249
|
250
....*....|....
gi 838657921 264 LTLFLKSVVQWRLE 277
Cdd:TIGR02139 250 VILLFINLLQWWAL 263
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
23-276 |
3.14e-47 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 159.15 E-value: 3.14e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 23 IGTGVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLL 102
Cdd:PRK10971 17 LGTSLLFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 103 LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVL 182
Cdd:PRK10971 97 DALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAET 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 183 LGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSI--RGETLSLPLQIELLEQDYNTVGSFTAAALLTl 260
Cdd:PRK10971 177 LGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIawKTEVTSLMIFVRLQEFDYPAASAIASVILAA- 255
|
250
....*....|....*.
gi 838657921 261 mAILTLFLKSVVQWRL 276
Cdd:PRK10971 256 -SLLLLFSINTLQSRF 270
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
12-289 |
9.80e-43 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 153.39 E-value: 9.80e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 12 APRINWGKWFLIGTGVLVSAFILVvPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLV 91
Cdd:COG1178 3 TRPRRRPRLLLLLLALLLALLVLL-PLLALLLRAFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 92 TRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEH---DLQIMFAWPGMVLVTVFVTCPFVVRELVPV 168
Cdd:COG1178 82 ARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALfglEPPDIYGLGGIILVLVLFNYPYVYLLLRAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 169 MLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRgetlSLPLQIelleqdYNT 248
Cdd:COG1178 162 LRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGYT----TLTTAI------YQA 231
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 838657921 249 V---GSFTAAALLTLMAILTLFLKSVVQWRLENQEKRQHQEGNH 289
Cdd:COG1178 232 WlgdFDLGAAAALALVLLLLVLLLLLLERRLRRRRRYATVGGRA 275
|
|
| Mo_ABC_porter |
TIGR01581 |
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ... |
54-268 |
1.79e-42 |
|
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.
Pssm-ID: 130643 Cd Length: 225 Bit Score: 145.23 E-value: 1.79e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 54 LQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGG 133
Cdd:TIGR01581 11 LSALTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLGP 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 134 WLDEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNAR 213
Cdd:TIGR01581 91 YLEAAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWAR 170
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 838657921 214 AIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAILTLFL 268
Cdd:TIGR01581 171 ALGEFGATLMFAGSIQGKTRTLPLAIYLNIQSDNIEAAVASALLLLVIAFLLLLV 225
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
67-268 |
4.50e-42 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 143.92 E-value: 4.50e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 67 WLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFAW 146
Cdd:TIGR02141 1 WLSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 147 PGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG 226
Cdd:TIGR02141 81 TGAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 838657921 227 SIRGETLSLPLQI-ELLEQDYNTVGsfTAAALLTLMAILTLFL 268
Cdd:TIGR02141 161 NIPGETQTIPLAIyDAVESDYELAH--QLSLVLLAISLIVLLL 201
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
60-285 |
4.60e-36 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 128.89 E-value: 4.60e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 60 PDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEH- 138
Cdd:PRK09421 5 DPEWQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWf 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 139 DLQIMFAWPGMVLVTVFVTCPFVVR------ELVPVMLSQgshedeAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNA 212
Cdd:PRK09421 85 GISFAFSWRGAALAAAVMAFPLMVRairlslEAVDRKLEQ------AARTLGASPWRVFFTITLPLTLPGIIAGTVLAFA 158
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 838657921 213 RAIGEFGAVSVVSGSIRGETLSLPLQIELLEQdynTVGSFTAAALLTLMAILtLFLKSVV--QWRLENQEKRQHQ 285
Cdd:PRK09421 159 RSLGEFGATITFVSNIPGETQTIPSAMYTLIQ---TPGGESAAARLCIISIA-IALASLLlsEWLARRSRKRLGA 229
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
9-268 |
1.48e-33 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 128.35 E-value: 1.48e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 9 RYDAPRINWGKWFLIGTGVLVSAFILVVPMVYIFVQAFSKGIMPAL------QNLADPDMLHAIWLTVMIALITVPVNLV 82
Cdd:COG1178 277 RPRRVKLGRWRWLALALCLLLVLLGLLLPLLALLLWSLTKALDDNLtldnyrFVLLDPSLLRALLNSLLLALLAALLAVL 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 83 FGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGgwldehdlqIMFAWPGMVLVTVFVTCPFVV 162
Cdd:COG1178 357 LALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLL---------LYGTLAILVLAYVVRFLPFAL 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 163 RELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgETLSLPLQIELL 242
Cdd:COG1178 428 RSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPP---GFETLAVLIYQL 504
|
250 260
....*....|....*....|....*.
gi 838657921 243 EQDYNTVGSFTAAALLTLMAILTLFL 268
Cdd:COG1178 505 ASSGRYGEAAALALLLVLVSLLPVLL 530
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
14-283 |
2.18e-32 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 120.22 E-value: 2.18e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 14 RINWGKWFLIGTGVLVSAFiLVVPMVYIFVQAFSKGIMPAL-----------QNLADPDMLHAIWLTVMIALITVPVNLV 82
Cdd:COG1177 1 SSRLGRLLLRLFLALVLLF-LYLPILVLVLYSFNDSWFLTFppegftlrwyaELFSDPRLLDALLNSLLIALLSTLLATV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 83 FGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLdehdlqimfawpGMVLVTVFVTCPFVV 162
Cdd:COG1177 80 LGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLW------------GLILAHVVFTLPFVV 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 163 RELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgetLSLPLQIELL 242
Cdd:COG1177 148 LVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGP-----GVTTLPVYIY 222
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 838657921 243 EQdYNTVGSFTAAALLTLMAILTLFLKSVVQWRLENQEKRQ 283
Cdd:COG1177 223 SM-IRRGISPEINALSTLLILLSLLLLLLAERLRRRGERRR 262
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
14-281 |
9.69e-29 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 111.38 E-value: 9.69e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 14 RINWGKWFLIGTGVLVSAFILVVPMVYIFVQAFSK--GIMPA-----LQN----LADPDMLHAIWLTVMIALITVPVNLV 82
Cdd:COG1175 15 RRRLAAYLFLLPALLLLLVFVLYPLLYTLYLSFTDwnLLGPPpefvgLDNyarlFTDPRFWNALGNTLLFTVVSVPLQLV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 83 FGVLLAWLVTRfNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSN-GPLG-----------GWLDEHDLqimfAWPGMV 150
Cdd:COG1175 95 LGLLLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDyGLLNallgalglepiNWLGDPSL----ALPAVI 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 151 LVTVFVTCPFVV-----------RELVpvmlsqgshedEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFG 219
Cdd:COG1175 170 IVTVWKGTGFNMliflaglqsipRELY-----------EAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFD 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 838657921 220 AVSVV-SGSIRGETLSLPLQIELLEQDYNTVGSftAAALLTLMAILTLFLkSVVQWRLENQEK 281
Cdd:COG1175 239 LVYVLtGGGPGNSTTTLVLYIYQTAFQQFDFGY--ASAIAVVLFLIILVL-TLLQLRLLRRRE 298
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
11-283 |
1.78e-26 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 104.84 E-value: 1.78e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 11 DAPRINWGKWFLIGTGVLVSAFILVVPMVYIFVQAFS-----KGIMPA--LQN----LADPDMLHAIWLTVMIALITVPV 79
Cdd:COG1176 3 AALRRRLRPLLLLLPALLWLLLFFVLPLLLLLVYSFTtrdpyGGVVPGftLENyarlFTDPLYLKVLLRTLWIALLTTLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 80 NLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLD-----EHDLQIMFAWPGMVLVTV 154
Cdd:COG1176 83 CLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLalgliDEPLRLLYTEFAVVIGLV 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 155 FVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGsirGETLS 234
Cdd:COG1176 163 YVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVLM 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 838657921 235 LPLQIellEQDYNTVGSF-TAAALLTLMAILTLFLKSVVQWRLENQEKRQ 283
Cdd:COG1176 240 IGNLI---YQQFLSALNWpLAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
66-263 |
2.97e-24 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 96.58 E-value: 2.97e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 66 IWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDehdlqimFA 145
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPG-------LG 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 146 WPGMVLVTVFVTcPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVS 225
Cdd:cd06261 74 LPALILALLLIA-PFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152
|
170 180 190
....*....|....*....|....*....|....*...
gi 838657921 226 GSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAI 263
Cdd:cd06261 153 GGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| TupA |
COG4662 |
ABC-type tungstate transport system, periplasmic component [Inorganic ion transport and ... |
46-232 |
3.72e-20 |
|
ABC-type tungstate transport system, periplasmic component [Inorganic ion transport and metabolism];
Pssm-ID: 443699 [Multi-domain] Cd Length: 232 Bit Score: 86.70 E-value: 3.72e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 46 FSKGIMPALQNLA--DPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLL 123
Cdd:COG4662 4 ILEGFAEALRLLLsgDPELWEIVLLSLRVSLTATLIAALIGLPLGALLALKRFPGRRLVISLLNTLMGLPPVVVGLLVYL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 124 FYGSNGPLGgwldehDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVtLPNIRWAL 203
Cdd:COG4662 84 LLSRSGPLG------FLGLLFTPTAMIIAQTVLALPIVAALTRAAVEDLDRRLRETLRSLGASRLQALLTL-LWEARFGL 156
|
170 180
....*....|....*....|....*....
gi 838657921 204 LYGVVLTNARAIGEFGAVSVVSGSIRGET 232
Cdd:COG4662 157 LAAVLAGFGRAISEVGAVMMVGGNIKGYT 185
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
13-268 |
2.30e-17 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 80.05 E-value: 2.30e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 13 PRINWGKWFLIGTGVLVSAFILVVPMVYIFVQAFSKGIMPALQN----LADPDMLHAIWLTVMIALITVPVNLVFGVLLA 88
Cdd:PRK15050 18 RRRRLRPLLWLLLPLLVLAPLVVYPLVRVVLQSLTGEHGLGLATyravLGSPDFRGALLTTLQIAFASTAGCLVLGVLLA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 89 WLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWL------DEHDLQIMFAWPGMVLVTVFVTCPFVV 162
Cdd:PRK15050 98 LVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALqrlfglEAPPLDFLYSPGGVILAEITFYTPFVV 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 163 RELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsGSIRGETlsLPLQIE-- 240
Cdd:PRK15050 178 RPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFT-GAKDVVT--LPVLIYsk 254
|
250 260
....*....|....*....|....*....
gi 838657921 241 -LLEQDYNtvgsfTAAALLTLMAILTLFL 268
Cdd:PRK15050 255 aIVDFDYP-----TACAIAVVNLALSLGL 278
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
17-279 |
2.65e-16 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 78.57 E-value: 2.65e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 17 WGKWFLIGTGVLVSAFILVVPMVYIFVQAF--SKGIMPALQN----LADPDMLHAIWLTVMIALITVPVNLVFGVLLAWL 90
Cdd:TIGR03262 1 LIARLLLAGMILALLLFLLLPLLALLTKSVydSDGDFIGLANfaeyFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 91 VTRFNFPGRQLLLTLLDIP-FAVS--PVVAgLVYLlfYGSNGPLGGWLDEHDLqimFAWPGMVLVTVFVTCPFVVRELVP 167
Cdd:TIGR03262 81 LTRSRIPGKGAFRLVALLPlLAPSllPAIS-LIYL--FGNQGLLKGLLGGFSI---YGFWGIVIGEVFYTFPHALMILVT 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 168 VMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIrgETLSLPLQIELLEQDYN 247
Cdd:TIGR03262 155 ALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDY--NVLATDIYKQVIGQQNF 232
|
250 260 270
....*....|....*....|....*....|..
gi 838657921 248 TVGSFTAAALLtLMAILTLFLKSVVQWRLENQ 279
Cdd:TIGR03262 233 PMGAVVGVLLL-LPALLAFGIDRAIQRRQRAQ 263
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
69-232 |
2.02e-15 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 72.58 E-value: 2.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 69 TVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGgwldehDLQIMFAWPG 148
Cdd:NF038017 1 SLRVSGTATLIAALIGIPLGALLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLG------FLGLLYTPTA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 149 MVLVTVFVTCPFV-------VRELVPVMLSQgshedeaAVLLGASGWQMFRRVtLPNIRWALLYGVVLTNARAIGEFGAV 221
Cdd:NF038017 75 MIIAQAVLALPIVagltlaaVQGLDPELRLQ-------ILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISEVGAV 146
|
170
....*....|.
gi 838657921 222 SVVSGSIRGET 232
Cdd:NF038017 147 MMVGGNIRGYT 157
|
|
| PhnU |
TIGR03226 |
2-aminoethylphosphonate ABC transporter, permease protein; This ABC transporter permease ... |
55-267 |
1.21e-13 |
|
2-aminoethylphosphonate ABC transporter, permease protein; This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Pssm-ID: 274484 Cd Length: 288 Bit Score: 69.59 E-value: 1.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 55 QNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGW 134
Cdd:TIGR03226 59 QFFASHDFIDALGNTLQIAFAAAGGALVLGSLLAAILFFIPFPGAQLVGRFIDLFIAFPSFLIAFAFIFIYGSAGLLNGA 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 135 L------DEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVV 208
Cdd:TIGR03226 139 LmaafafDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAGFAQIDKRLLEAASILGAHGLMLARQVIFPAALPAIAAGGI 218
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 209 LTNARAIGEFGAVSVVsGSIRGETLSLPL-QIELLEQDYNTVGSFTAAALLTLMAILTLF 267
Cdd:TIGR03226 219 LCFLLTLNEFGILLFI-GAAGLITLPMAIySKAILDIDLPAAAAGALIMIALSLALFALY 277
|
|
| COG4132 |
COG4132 |
ABC-type uncharacterized transport system, permease component [General function prediction ... |
8-274 |
2.13e-13 |
|
ABC-type uncharacterized transport system, permease component [General function prediction only];
Pssm-ID: 443307 [Multi-domain] Cd Length: 286 Bit Score: 68.68 E-value: 2.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 8 KRYDAPRINWGKWFLIGTGVLVSAFILVVPMVYIFVQAF-SKGIMPALQN---LADPDMLHAIWLTVMIALITVPVNLVF 83
Cdd:COG4132 3 TASRRRRRKWLAWLGLLPFFLFVLLFLLLPTVWVVIGAFqDDDGGFTLANyaeLTSPFYLQAFWNSIWLSLASALIGAVI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 84 GVLLAWLVTRFNFPG-RQLLLTLLDIP--FAVSPVVAGLVYLLfyGSNGPLGGWLDEHDLQIM-----FAWPGMVLVTVF 155
Cdd:COG4132 83 GLLLAYALRRGGPGWlRRAVLAFSGVAsnFAGVPLAFAFIATL--GRNGLVTLLLKQLGIDLYdgfnlYSFWGLILVYLY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 156 VTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF--------GAVSVV--- 224
Cdd:COG4132 161 FQIPLMVLLLYPALDGLRREWREAAALLGASRWQYWRRVALPVLAPSLLGTFLLLFANAFGAYatayaltgGNYNLVpir 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 838657921 225 -SGSIRGETLslpLQIELleqdyntvgsftAAALLTLMAILTLFLKSVVQW 274
Cdd:COG4132 241 iGALISGDVL---LDPNL------------GAALALGMIVIMALVMALYQW 276
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
13-268 |
2.87e-13 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 68.25 E-value: 2.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 13 PRINWGKWFLIGTGVLVSAFILVvPMVYIFVQAFSKG-------IMPA---LQN----LADPDMLHAIWLTVMIALITVP 78
Cdd:COG3833 9 RRRRLKLGLRHLVLIILAIIALF-PILWVVSASFNPGgslysssLIPEnftLENykklFTETPFLRWFLNSLIVAVVTAI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 79 VNLVFGVLLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGLV--YLLFYGSNGplggwLDEHdlqimfawPGMVLVTVFV 156
Cdd:COG3833 88 ISVFLAALAAYAFSRFRFKGRKAGLLALLL-LQMFPAFLALValYLLLSALGL-----LNTL--------LGLILVYLGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 157 TCPFVVREL------VPVMLsqgsheDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRG 230
Cdd:COG3833 154 AIPFNTWLMkgyfdtIPKEL------DEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRSPEN 227
|
250 260 270
....*....|....*....|....*....|....*....
gi 838657921 231 ETLSLPLQiELLEQDYNT-VGSFTAAALLTLMAILTLFL 268
Cdd:COG3833 228 YTLAVGLY-SFVSDQRNTnWGVFAAGAVLVAIPIVILFL 265
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
8-200 |
6.82e-13 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 67.43 E-value: 6.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 8 KRYDAPRINWGKWFLIGTGVLVSAFILVvPMVYIFVQAFS--KGIM----------PALQN----LADPDMLHAIWLTVM 71
Cdd:COG0395 3 ATARRRRRRLGRILLYLLLILLALLFLF-PLYWMVVTSFKppAEIFsgppsllpseFTLENyraaFTDGPFGRYLLNSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 72 IALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVsPVVAGLV--YLLFYGsngplGGWLDEhdlqimfaWPGM 149
Cdd:COG0395 82 VAVVSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMI-PGQVLLIplYLLFRQ-----LGLLNT--------YWGL 147
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 838657921 150 VLVTVFVTCPFVV-----------RELvpvmlsqgsheDEAAVLLGASGWQMFRRVTLPNIR 200
Cdd:COG0395 148 ILPYLAFGLPFGIfllrqffrsipREL-----------EEAARIDGASEFRIFWRIVLPLSK 198
|
|
| thiP |
PRK09433 |
thiamine transporter membrane protein; Reviewed |
26-205 |
7.78e-10 |
|
thiamine transporter membrane protein; Reviewed
Pssm-ID: 181853 [Multi-domain] Cd Length: 525 Bit Score: 59.08 E-value: 7.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 26 GVLVSAFILVV---PMVYIFVQAFSKGIMPALQnlaDPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLL 102
Cdd:PRK09433 6 GVLAAALLVALallALLALWLHAPGGDWDAVWQ---DSYLWHVLRFSFWQAFLSALLSVLPAIPLARALYRRRFPGRGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 103 LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMFA---WPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEA 179
Cdd:PRK09433 83 LRLCAMTLVLPVLVAVFGLLSVYGRSGWLAQLLQALGLEWPFSiygLQGILLAHVFFNLPLATRLLLQALESIPAEQRQL 162
|
170 180
....*....|....*....|....*.
gi 838657921 180 AVLLGASGWQMFRRVTLPNIRWALLY 205
Cdd:PRK09433 163 AAQLGMRGWQFFRLVEWPYLRRQLPP 188
|
|
| thiP |
PRK09433 |
thiamine transporter membrane protein; Reviewed |
17-222 |
2.46e-08 |
|
thiamine transporter membrane protein; Reviewed
Pssm-ID: 181853 [Multi-domain] Cd Length: 525 Bit Score: 54.46 E-value: 2.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 17 WGKWFLIGTGVLVSAFILVvPMVYIFVQAFSKGImpaLQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNF 96
Cdd:PRK09433 276 WSRLWDGLLIVLALLLLLP-PLLAVVVSGLNASL---LRVLAQPALWQALWTSLRIALAAALLAVVLTMMLLWSSRELRL 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 97 PGRQLLLTLLD----IPFAVSPVV--AGLVYLLFygsngplggwldEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVML 170
Cdd:PRK09433 352 RQRKLAAQALElsgmLILAMPGIVlaTGLFLLLR------------NTTDLPASALGIVILTNALMALPYALRVLEPPMR 419
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 838657921 171 SQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVS 222
Cdd:PRK09433 420 DIAARYGRLCQSLGIRGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIA 471
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
18-275 |
3.10e-08 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 53.81 E-value: 3.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 18 GKWFLIGTGVLVSAFILVVpMVYIFVQAfskgiMPALQNLA----------DPD---------MLHAIWLTVMIALITVP 78
Cdd:TIGR02138 4 FKGLLLFSAVIIVLVLLLI-VLFLLYEA-----IPAFEKNGilnfltgtvwDPGsgpvqeqygALPLIVGTLITSLIALL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 79 VNLVFGVLLAWLVTRFNFP-GRQLLLTLLDIPFAVSPVVAGLVYLLFYG------SNGPLGGWLDEHDLQIMFAWPGMVL 151
Cdd:TIGR02138 78 IAVPVGIGIAIFLSEIAPKrVRSVLKPVVELLAGIPSVVYGFWGLFVLVpflkphFQPFLGSNLGLIPLFGGPILTAGIV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 152 VTVFVTcPFV------VRELVPVMLSqgshedEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVS 225
Cdd:TIGR02138 158 LAIMIL-PTIasisrdALRAVPRSYK------EASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVI 230
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 838657921 226 GSIR----------GETLSLPLQIELLEQDYNTVGS---FTAAALLTLMAILTLFLKSVVQWR 275
Cdd:TIGR02138 231 GNVFpisplslfdpGTTITSLIANQFGEASGGSVHTsalFALGLVLFVITLLVNILARYIVRR 293
|
|
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
33-268 |
4.21e-08 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 53.12 E-value: 4.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 33 ILVVPMVYIFVQAFSKGImPALqnlaDPDML--------------HAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPG 98
Cdd:COG0581 1 LALLPLVWILGTVLVKGL-PAL----SWEFLtsspspgpegggilPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 99 R--QLLLTLLDIPFAVSPVVAGL-VYLLF-YGSNGPLGGWLdehdlqimfawpGMVLVTVFVTcPFVVR------ELVPV 168
Cdd:COG0581 76 RlaRLIRFAIDVLAGVPSIVYGLfGYALFvLTLGLGFSLLA------------GALALALLML-PVVIRtteealRLVPN 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 169 MLSqgshedEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGE-------FGAVSVVSGSIRGETLSLPLQIel 241
Cdd:COG0581 143 SLR------EASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGEtapllftAGVSPFLPLSLFDPFATLPVHI-- 214
|
250 260 270
....*....|....*....|....*....|....*
gi 838657921 242 leqdYNTVGSFT--------AAALLTLMAILTLFL 268
Cdd:COG0581 215 ----YNLASSPYpaaqelawAAALVLLLLVLLLNL 245
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
27-268 |
5.36e-08 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 53.01 E-value: 5.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 27 VLVSAFILVVPMVYIFVQAFSKGImPAL----------QNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNF 96
Cdd:TIGR00974 8 SLLSALLALLPLIWILWYILIKGL-PALnlefftksptPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 97 PGR--QLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGwldehdlqimFAWPGMVLVTVFVTCPFVVRELVPVMLSQGS 174
Cdd:TIGR00974 87 GSRftKIIRFAVDILAGVPSIVVGLFGYGFFVLTYLGGG----------FSLLAGALALALLILPVIIRTTEEALKAVPK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 175 HEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSG-------SIRGETLSLPLQIelleqdYN 247
Cdd:TIGR00974 157 DLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGgsaftppNLFDPFATLPVLI------YN 230
|
250 260 270
....*....|....*....|....*....|
gi 838657921 248 TVGSFT---------AAALLTLMAILTLFL 268
Cdd:TIGR00974 231 LASEGPyveaqqlawAAALVLIVLVLLLNL 260
|
|
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
66-268 |
1.14e-07 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 52.02 E-value: 1.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 66 IWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIpFAVSPVVAGLV--YLLF--YGSNGPLGGwLDEHdLQ 141
Cdd:PRK10998 85 LWNSVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLI-FQMFPAVLSLValYALFdrLGQYIPFIG-LNTH-GG 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 142 IMFAWPGMVLVTVFVTCPFVvrELVPVMLsqgsheDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAV 221
Cdd:PRK10998 162 VIFAYLGGIALHVWTIKGYF--ETIDSSL------EEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVA 233
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 838657921 222 SVVSGSIRGETLSLPLQIELLEQDYnTVGSFTAAALLTLMAILTLFL 268
Cdd:PRK10998 234 SLLLRDVNSYTLAVGMQQYLNPQNY-LWGDFAAAAVLSAIPITVVFL 279
|
|
| thiP |
TIGR01253 |
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ... |
26-270 |
1.21e-06 |
|
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]
Pssm-ID: 130320 [Multi-domain] Cd Length: 519 Bit Score: 49.53 E-value: 1.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 26 GVLVSAFILVVPMVYIFVQAFSKGIMPALQNLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTL 105
Cdd:TIGR01253 9 GVSAISFIIAFAGAAFLAIFALAGEDDWRAVFQDDYLQHLILFSFGQAFLSALLSIFFAIFLARALFRKPFLGKKALLKL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 106 LDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHDLQIMF---AWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVL 182
Cdd:TIGR01253 89 CALTFILPALVAIFGIIGIYGRQGWLATLANLFGLEWQFhiyGLQGILIAHLFFNIPLAAQLFLQALENIPGEQRQLAAQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 183 LGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPL-QIELLEQDYNTVGSFtaaALLTLM 261
Cdd:TIGR01253 169 LGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASFATVLSLGGGPQATTIELAIyQAILFDFDLAKAALF---ALLQFV 245
|
....*....
gi 838657921 262 AILTLFLKS 270
Cdd:TIGR01253 246 CCLGLFLLS 254
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
81-267 |
2.42e-06 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 46.91 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 81 LVFGVLLAwlvTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLdehdlqimfawpgMVLVTVFVTCPF 160
Cdd:pfam00528 2 IPLGIIAA---LRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHGIL-------------PAIILALLGWAG 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 161 VVRELVPVMLSQGSHE-DEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVsgsIRGETLSLPLQI 239
Cdd:pfam00528 66 YARLIRRAALRSLPSDlVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL---GSWPGLGLLLIE 142
|
170 180
....*....|....*....|....*...
gi 838657921 240 ELLEQDYNTVGSFTAAALLTLMAILTLF 267
Cdd:pfam00528 143 AILGYDYPEIQGPVLAAALILLLLNLLV 170
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
57-274 |
3.28e-06 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 47.29 E-value: 3.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 57 LADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLL-------DIPFAVSPVVaglvylLFYGSNG 129
Cdd:PRK09500 50 FNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKKFVSGMLfvvmmspDIVMAISLLV------LFMLLGI 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 130 PLGGW--LDEHdlqIMFAWPgMVLVTVFVTcpfvVRELVPVMLsqgshedEAAVLLGASGWQMFRRVTLPNIRWALLYGV 207
Cdd:PRK09500 124 QLGFWslLFAH---ITFCLP-FVVVTVYSR----LKGFDVRML-------EAAKDLGASEFTILRKIILPLALPAVAAGW 188
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 838657921 208 VLTNARAIGEFgavsVVSGSIRGETLS-LPLQIelleqdYNTVG---SFTAAALLTLMAILTLFLKSVVQW 274
Cdd:PRK09500 189 LLSFTLSLDDV----VVSSFVTGPSYEiLPLKI------YSMVKvgvSPEVNALATILLVLSLVLVILSQL 249
|
|
| thiP |
TIGR01253 |
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ... |
27-268 |
9.09e-06 |
|
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]
Pssm-ID: 130320 [Multi-domain] Cd Length: 519 Bit Score: 46.84 E-value: 9.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 27 VLVSAFILVVPMVYIFVQAFSKGIMPALqnLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLL 106
Cdd:TIGR01253 288 ILLALFFLFPPLLAIIIDALNSRNLLEV--LANPQLWQALGTSLRIALAAALLALTLAIALLLLSRELEALHKMKAGQFI 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 107 dipfavspVVAGLVYLLFYGSNGPLGGWL--DEHDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLG 184
Cdd:TIGR01253 366 --------EMAGMLILAIPGIVLAMGFFLllNDRDFLNIDADGIVIFCNALMAIPFALKILEAPFHDIMARYEMLCNSLG 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 185 ASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSirgETLSLPLQIELLEQDY-NTVGSFTAAALLTLMAI 263
Cdd:TIGR01253 438 IEGWQRFKLIELKALKAPLAQAFAFACALSIGDFGAIALFGND---DFRSLPFLLYQQIGNYrNQDAAVTAGILLLLCFI 514
|
....*
gi 838657921 264 LTLFL 268
Cdd:TIGR01253 515 LFAFI 519
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
1-226 |
1.57e-05 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 45.47 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 1 MAEVTQLKRYDAPRI--NWGKWFLigtgvLVSAFILVVPMVYIFVQAFSKGImPALQNLA----------DPD------- 61
Cdd:COG0573 1 MSSSRLRPRRRRRRLgdRLFRGLL-----LLAALLSILILLLIVLFLLIESL-PAFQEVGllefltgtewNPVssngefg 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 62 MLHAIWLTVMIALITVPVNLVFGVLLAWLVTRF-NFPGRQLLLTLLDIPFAVSPVVAGLVYLLFygsngpLGGWLDEHdl 140
Cdd:COG0573 75 ILPLIVGTLLVSLIALLIAVPLGLGIAIFLSEYaPPRLRRILKPAIELLAGIPSVVYGFWGLFV------LVPLLRDL-- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 141 qimFAWPGM--------VLVTVFVTcPFVV---RElvpVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVL 209
Cdd:COG0573 147 ---FPWPPSgfslltagIVLAIMIL-PTITslsRD---ALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVIL 219
|
250
....*....|....*..
gi 838657921 210 TNARAIGEFGAVSVVSG 226
Cdd:COG0573 220 GLGRALGETMAVLMVAG 236
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
56-218 |
3.63e-05 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 44.29 E-value: 3.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 56 NLADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLG--- 132
Cdd:PRK09497 55 RLLDPLYAEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNefl 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 133 ---GWLDEhDLQIMFAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVL 209
Cdd:PRK09497 135 lwlGVIDT-PIRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLL 213
|
....*....
gi 838657921 210 TNARAIGEF 218
Cdd:PRK09497 214 VLLPAMGMF 222
|
|
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
59-285 |
1.56e-04 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 42.53 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 59 DPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRF-NFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDE 137
Cdd:PRK10592 58 DDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPAD 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 138 HD-LQIMFAWPGMVLVTVFVTCPFVVRELVPVMlsqgsheDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIG 216
Cdd:PRK10592 138 RGmLTIWLAHVTFCTAYVAVVISSRLRELDRSI-------EEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLD 210
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 217 EFGAVSVVSGSirGETlSLPLQI-ELLEQDYNTVGSFTAAALLTLMAILTLflksvVQWRLENQEKRQHQ 285
Cdd:PRK10592 211 DLVIASFVSGP--GAT-TLPMLVfSSVRMGVNPEINALATLILGVVGIVGF-----IAWYLMARAEKQRI 272
|
|
| LplB |
COG4209 |
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and ... |
16-200 |
3.12e-03 |
|
ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 443357 [Multi-domain] Cd Length: 316 Bit Score: 38.53 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 16 NWGKWFLIGTGVLVSAFILVVPMVYIFVqAF-----SKGIMPA----LQN----LADPDMLHAIWLTVMIALITVPVNLV 82
Cdd:COG4209 26 DWQLYLMLLPGLIYLLIFSYLPMYGIVI-AFkdynpFKGIFGSpwvgLKNfkflFSSPDFWRVLRNTLLISLLKLVFGFP 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 83 FGVLLAWLV-----TRFnfpgRQLLLTLLDIPFAVSPVV-AGLVYLLFYGSNGPLGGWLDEHDLQ-IMF-----AWPG-M 149
Cdd:COG4209 105 LPIILALLLnelrsKRF----KKTVQTISYLPHFLSWVVvAGIVYQFLSPDTGLVNQLLRALGGEpINFltepkYFRPiY 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 838657921 150 VLVTVFVTCPF-----------VVRELVpvmlsqgshedEAAVLLGASGWQMFRRVTLPNIR 200
Cdd:COG4209 181 VFSGIWKEAGWgsiiylaaitgIDPELY-----------EAAAIDGAGRWQQIWHITLPGIR 231
|
|
| YnjC |
COG4135 |
ABC-type uncharacterized transport system YnjBCD, permease component [General function ... |
58-223 |
3.53e-03 |
|
ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];
Pssm-ID: 443310 [Multi-domain] Cd Length: 564 Bit Score: 38.70 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 58 ADPDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQLLLTLLDIPFAVsPVVAGL----VYLLFYGSNGplgg 133
Cdd:COG4135 350 AAPGLLEPLGNTLLLALASALIALVLVLACLEAEARRGRRPGRRALWLLYLPLLV-PQIAFLfglqVLLLRLGLDG---- 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 134 wldehdlqimfAWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPNIRWALLYgvvltnAR 213
Cdd:COG4135 425 -----------TWLAVIWAHLVFVLPYVFLSLAGPWRALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILT------AA 487
|
170
....*....|
gi 838657921 214 AIGEfgAVSV 223
Cdd:COG4135 488 AVGF--AVSV 495
|
|
| ArtM |
COG4160 |
ABC-type arginine/histidine transport system, permease component [Amino acid transport and ... |
60-203 |
6.28e-03 |
|
ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443325 [Multi-domain] Cd Length: 229 Bit Score: 37.38 E-value: 6.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 838657921 60 PDMLHAIWLTVMIALITVPVNLVFGVLLAWLVTRFNFPGRQL--LLTLLdipFAVSPVVAGLvYLLFYGsngpLG--GWL 135
Cdd:COG4160 11 PLLLSGLPLTLQLLALSLLLGFLLAVPLALARASGNRLLRWParGYIYV---FRGTPLLVQL-FLIYYG----LGqfEWV 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 838657921 136 DEHDLQIMF--AWPGMVLVTVFVTCPFVVRELVPVMLSQGSHEDEAAVLLGASGWQMFRRVTLPN-IRWAL 203
Cdd:COG4160 83 RESWLWPLLrdPWFCALLALTLNTAAYTAEIFRGAIRAVPKGEIEAARALGMSRWQTFRRIILPSaLRRAL 153
|
|
| |
