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Conserved domains on  [gi|818771084|gb|KKU12352|]
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hypothetical protein UX19_C0002G0059 [Candidatus Woesebacteria bacterium GW2011_GWA1_45_8]

Protein Classification

type II secretion system protein( domain architecture ID 11450365)

type II secretion system protein similar to Pseudomonas aeruginosa type II secretion system protein H, which is involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins; required for the translocation of a variety of enzymes across the outer membrane; pilin similar to fimbrial protein PilE, which is required for pilus biogenesis, as well as fimbrial protein PilA, which is responsible for the adhesive property of the pilus

Gene Ontology:  GO:0005886|GO:0015628|GO:0015627
PubMed:  30767847|1365398

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PulG COG2165
Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, ...
 1-68 6.45e-07

Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


:

Pssm-ID: 441768 [Multi-domain]  Cd Length: 99  Bit Score: 44.52  E-value: 6.45e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 818771084   1 MLITIAIIGILATTSFILINPQRQlaKSRDTQRRTDLYSIATSVYQYSAEHsGALPDTDGDPATSNFP 68
Cdd:COG2165   18 LLVVIAIIGILAALALPALQGARE--RARRAELRSNLRQIQQALERYRLDN-GRYPSSLTGLLADVRG 82
 
Name Accession Description Interval E-value
PulG COG2165
Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, ...
 1-68 6.45e-07

Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 441768 [Multi-domain]  Cd Length: 99  Bit Score: 44.52  E-value: 6.45e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 818771084   1 MLITIAIIGILATTSFILINPQRQlaKSRDTQRRTDLYSIATSVYQYSAEHsGALPDTDGDPATSNFP 68
Cdd:COG2165   18 LLVVIAIIGILAALALPALQGARE--RARRAELRSNLRQIQQALERYRLDN-GRYPSSLTGLLADVRG 82
 
Name Accession Description Interval E-value
PulG COG2165
Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, ...
 1-68 6.45e-07

Type II secretory pathway, pseudopilin PulG [Cell motility, Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 441768 [Multi-domain]  Cd Length: 99  Bit Score: 44.52  E-value: 6.45e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 818771084   1 MLITIAIIGILATTSFILINPQRQlaKSRDTQRRTDLYSIATSVYQYSAEHsGALPDTDGDPATSNFP 68
Cdd:COG2165   18 LLVVIAIIGILAALALPALQGARE--RARRAELRSNLRQIQQALERYRLDN-GRYPSSLTGLLADVRG 82
PilE COG4968
Type IV pilus assembly protein PilE [Cell motility, Extracellular structures];
1-83 2.79e-05

Type IV pilus assembly protein PilE [Cell motility, Extracellular structures];


Pssm-ID: 443994 [Multi-domain]  Cd Length: 124  Bit Score: 40.83  E-value: 2.79e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818771084   1 MLITIAIIGILATTSFilinP--QRQLAKSRDTQRRTDLYSIATSVYQYSAEH---SGALPDTDGDPATSNFPTSAtcIG 75
Cdd:COG4968   17 LMIVVAIIGILAAIAI----PsyQDYVERARRAEAKAALLELAQAQERYYADNgsyPSALADLGLPASTSGYYTIS--IA 90


                 ....*...
gi 818771084  76 TGGGCFNL 83
Cdd:COG4968   91 AAATTYTL 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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