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Conserved domains on  [gi|818644800|gb|KKS91674|]
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MAG: hypothetical protein UV65_C0001G0029 [Parcubacteria group bacterium GW2011_GWF2_43_11]

Protein Classification

DUF1573 domain-containing protein( domain architecture ID 10541252)

DUF1573 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1573 pfam07610
Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as ...
 38-141 1.18e-20

Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.


:

Pssm-ID: 429559  Cd Length: 98  Bit Score: 80.25  E-value: 1.18e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818644800   38 IEITPKSFDFGEVQYGDIAEYSFKIKNMGSAVLEIKRLATSCGCTSAEIAEKQINPGEEAELRVAYDTGamsgpHGKGPQ 117
Cdd:pfam07610   1 ITFEETTIDFGTIEEGGPVTHTFTFTNTGKAPLVITDVRTSCGCTTPEWPKEPIAPGETGKIKVTFDAK-----GRPGHF 75

                          90       100
                  ....*....|....*....|....
gi 818644800  118 ERIVYIKSSDPiNPQVEVMIYANV 141
Cdd:pfam07610  76 NKTITVYSNAS-PGPVTLTIKGNV 98
 
Name Accession Description Interval E-value
DUF1573 pfam07610
Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as ...
 38-141 1.18e-20

Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.


Pssm-ID: 429559  Cd Length: 98  Bit Score: 80.25  E-value: 1.18e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818644800   38 IEITPKSFDFGEVQYGDIAEYSFKIKNMGSAVLEIKRLATSCGCTSAEIAEKQINPGEEAELRVAYDTGamsgpHGKGPQ 117
Cdd:pfam07610   1 ITFEETTIDFGTIEEGGPVTHTFTFTNTGKAPLVITDVRTSCGCTTPEWPKEPIAPGETGKIKVTFDAK-----GRPGHF 75

                          90       100
                  ....*....|....*....|....
gi 818644800  118 ERIVYIKSSDPiNPQVEVMIYANV 141
Cdd:pfam07610  76 NKTITVYSNAS-PGPVTLTIKGNV 98
choice_anch_D NF012200
choice-of-anchor D domain; This HMM describes a repeat domain just over 100 amino acids long ...
 31-110 9.55e-06

choice-of-anchor D domain; This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.


Pssm-ID: 467954 [Multi-domain]  Cd Length: 107  Bit Score: 41.84  E-value: 9.55e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818644800  31 GTG---NLPQIEITPKSFDFGEVQYGDIAEYSFKIKNMGSAVLEIKRLATScGCTSAEIAEK-----QINPGEEAELRVA 102
Cdd:NF012200   7 GNGvaaADPSITPSPASIDFGNVRVGDTASQTVTITNTGTAALTIEGLTIS-GTNAGDFTVSgnsptTLAAGGSCTLTVT 85

                         90
                 ....*....|.
gi 818644800 103 YDT---GAMSG 110
Cdd:NF012200  86 FDPtaaGARSG 96
 
Name Accession Description Interval E-value
DUF1573 pfam07610
Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as ...
 38-141 1.18e-20

Protein of unknown function (DUF1573); These hypothetical proteins, from bacteria such as Rhodopirellula baltica, Bacteroides thetaiotaomicron, and Porphyromonas gingivalis, share a region of conserved sequence towards their N-termini.


Pssm-ID: 429559  Cd Length: 98  Bit Score: 80.25  E-value: 1.18e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818644800   38 IEITPKSFDFGEVQYGDIAEYSFKIKNMGSAVLEIKRLATSCGCTSAEIAEKQINPGEEAELRVAYDTGamsgpHGKGPQ 117
Cdd:pfam07610   1 ITFEETTIDFGTIEEGGPVTHTFTFTNTGKAPLVITDVRTSCGCTTPEWPKEPIAPGETGKIKVTFDAK-----GRPGHF 75

                          90       100
                  ....*....|....*....|....
gi 818644800  118 ERIVYIKSSDPiNPQVEVMIYANV 141
Cdd:pfam07610  76 NKTITVYSNAS-PGPVTLTIKGNV 98
choice_anch_D NF012200
choice-of-anchor D domain; This HMM describes a repeat domain just over 100 amino acids long ...
 31-110 9.55e-06

choice-of-anchor D domain; This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.


Pssm-ID: 467954 [Multi-domain]  Cd Length: 107  Bit Score: 41.84  E-value: 9.55e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818644800  31 GTG---NLPQIEITPKSFDFGEVQYGDIAEYSFKIKNMGSAVLEIKRLATScGCTSAEIAEK-----QINPGEEAELRVA 102
Cdd:NF012200   7 GNGvaaADPSITPSPASIDFGNVRVGDTASQTVTITNTGTAALTIEGLTIS-GTNAGDFTVSgnsptTLAAGGSCTLTVT 85

                         90
                 ....*....|.
gi 818644800 103 YDT---GAMSG 110
Cdd:NF012200  86 FDPtaaGARSG 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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