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Conserved domains on  [gi|818607654|gb|KKS56603|]
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MAG: hypothetical protein UV20_C0009G0082 [Candidatus Magasanikbacteria bacterium GW2011_GWA2_42_32]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpZ super family cl44216
FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter [Energy ...
 2-73 2.04e-04

FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter [Energy production and conversion]; FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter is part of the Pathway/BioSystem: FoF1-type ATP synthase


The actual alignment was detected with superfamily member COG5336:

Pssm-ID: 444120 [Multi-domain]  Cd Length: 78  Bit Score: 36.12  E-value: 2.04e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 818607654  2 DKLKNDRKYYFFALKIAGDFGVSIAAPVVIFVLIGQYFDNKYNLTPYLTILAFVIAALISGKIIHQKAKKYG 73
Cdd:COG5336   7 AAKNPKKKESLSALGLASRLGIELVAGILVGVGIGYLLDKWLGTSPWFLIIFLLLGFAAGFYNVYRLAKKLQ 78
 
Name Accession Description Interval E-value
AtpZ COG5336
FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter [Energy ...
 2-73 2.04e-04

FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter [Energy production and conversion]; FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 444120 [Multi-domain]  Cd Length: 78  Bit Score: 36.12  E-value: 2.04e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 818607654  2 DKLKNDRKYYFFALKIAGDFGVSIAAPVVIFVLIGQYFDNKYNLTPYLTILAFVIAALISGKIIHQKAKKYG 73
Cdd:COG5336   7 AAKNPKKKESLSALGLASRLGIELVAGILVGVGIGYLLDKWLGTSPWFLIIFLLLGFAAGFYNVYRLAKKLQ 78
 
Name Accession Description Interval E-value
AtpZ COG5336
FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter [Energy ...
 2-73 2.04e-04

FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter [Energy production and conversion]; FoF1-type ATP synthase AtpZ/Atp1/AtpQ subunit, putative Ca2+/Mg2+ transporter is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 444120 [Multi-domain]  Cd Length: 78  Bit Score: 36.12  E-value: 2.04e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 818607654  2 DKLKNDRKYYFFALKIAGDFGVSIAAPVVIFVLIGQYFDNKYNLTPYLTILAFVIAALISGKIIHQKAKKYG 73
Cdd:COG5336   7 AAKNPKKKESLSALGLASRLGIELVAGILVGVGIGYLLDKWLGTSPWFLIIFLLLGFAAGFYNVYRLAKKLQ 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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