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Conserved domains on  [gi|818317774|gb|KKQ01278|]
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MAG: hypothetical protein US09_C0001G0038 [Candidatus Moranbacteria bacterium GW2011_GWD1_36_198]

Protein Classification

ArnT family glycosyltransferase( domain architecture ID 11448528)

ArnT family glycosyltransferase catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds; ArnT is an integral membrane lipid-to-lipid glycosyltransferase and the last enzyme in the aminoarabinose biosynthetic pathway of Gram-negative bacteria

CAZY:  GT83
EC:  2.4.-.-
Gene Ontology:  GO:0016757

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ArnT COG1807
PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA ...
16-253 6.66e-18

PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 441412 [Multi-domain]  Cd Length: 309  Bit Score: 84.67  E-value: 6.66e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  16 SRFFVGAILIAILAVGVFLRAYNFSDWQHFELDQSRDAKVIDLAVENGVGDLPLLgpkAAGSFLRLGPIFYYFGYVSAKV 95
Cdd:COG1807    2 SKTLSARPLLLLLLLALLLRLLGLGSLPLWDPDEARYAEIAREMLESGDWLTPTL---AGEPYFDKPPLIYWLIALSYKL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  96 FGNTPSGIAVISLIFSCLTLPLFYLFVRRFFSKKIGLMLLGVFSVSIFLVLYSRFSWNPNNLPFFILGALYGLLRATDen 175
Cdd:COG1807   79 FGVSEFAARLPSALLGLLTVLLVYLLARRLFGRRAALLAALLLLTSPLLLLFGRLATPDALLLLFWTLALYALLRALE-- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 176 EKRKGWWLIVGV-VSLTIATQlHFVAFLGLPMIAVAYLLIKRP---LINWKYWLASIACIVFLYIPSIINDFKTGGSNII 251
Cdd:COG1807  157 RRRLRWLLLAGLaLGLGFLTK-GPVALLLPGLALLLYLLLTRRwrrLRRLRLLLGLLLALLLALPWYIANDWATGPAFLE 235

                 ..
gi 818317774 252 EF 253
Cdd:COG1807  236 YF 237
 
Name Accession Description Interval E-value
ArnT COG1807
PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA ...
16-253 6.66e-18

PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441412 [Multi-domain]  Cd Length: 309  Bit Score: 84.67  E-value: 6.66e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  16 SRFFVGAILIAILAVGVFLRAYNFSDWQHFELDQSRDAKVIDLAVENGVGDLPLLgpkAAGSFLRLGPIFYYFGYVSAKV 95
Cdd:COG1807    2 SKTLSARPLLLLLLLALLLRLLGLGSLPLWDPDEARYAEIAREMLESGDWLTPTL---AGEPYFDKPPLIYWLIALSYKL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  96 FGNTPSGIAVISLIFSCLTLPLFYLFVRRFFSKKIGLMLLGVFSVSIFLVLYSRFSWNPNNLPFFILGALYGLLRATDen 175
Cdd:COG1807   79 FGVSEFAARLPSALLGLLTVLLVYLLARRLFGRRAALLAALLLLTSPLLLLFGRLATPDALLLLFWTLALYALLRALE-- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 176 EKRKGWWLIVGV-VSLTIATQlHFVAFLGLPMIAVAYLLIKRP---LINWKYWLASIACIVFLYIPSIINDFKTGGSNII 251
Cdd:COG1807  157 RRRLRWLLLAGLaLGLGFLTK-GPVALLLPGLALLLYLLLTRRwrrLRRLRLLLGLLLALLLALPWYIANDWATGPAFLE 235

                 ..
gi 818317774 252 EF 253
Cdd:COG1807  236 YF 237
PMT_2 pfam13231
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
83-240 7.46e-11

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


Pssm-ID: 433048 [Multi-domain]  Cd Length: 160  Bit Score: 60.74  E-value: 7.46e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774   83 PIFYYFGYVSAKVFGNTPSGIAVISLIFSCLTLPLFYLFVRRFFSKKIGLMLLGVFSVSIFLVLYSRFSwNPNN-LPFFI 161
Cdd:pfam13231   4 PLAAWLIALFTALFGDSEWAVRLPSALAGVLTILLLYLLARRLFGKRAALLAALLLAVVPLFVALSRLF-TPDApLLLFW 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  162 LGALYGLLRATDENekRKGWWLIVGVVsLTIATQLHFVAFLgLPMIAVAYLLI--KRPLINWKYWLASIACIVFLYIPSI 239
Cdd:pfam13231  83 ALALYFLLRALEKG--RLKWWLLAGAA-AGLGFLSKYTAAL-LVLAALLYLLIspGRRRLKSPKPYLGLLLALLLFSPVL 158

                  .
gi 818317774  240 I 240
Cdd:pfam13231 159 I 159
 
Name Accession Description Interval E-value
ArnT COG1807
PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA ...
16-253 6.66e-18

PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441412 [Multi-domain]  Cd Length: 309  Bit Score: 84.67  E-value: 6.66e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  16 SRFFVGAILIAILAVGVFLRAYNFSDWQHFELDQSRDAKVIDLAVENGVGDLPLLgpkAAGSFLRLGPIFYYFGYVSAKV 95
Cdd:COG1807    2 SKTLSARPLLLLLLLALLLRLLGLGSLPLWDPDEARYAEIAREMLESGDWLTPTL---AGEPYFDKPPLIYWLIALSYKL 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  96 FGNTPSGIAVISLIFSCLTLPLFYLFVRRFFSKKIGLMLLGVFSVSIFLVLYSRFSWNPNNLPFFILGALYGLLRATDen 175
Cdd:COG1807   79 FGVSEFAARLPSALLGLLTVLLVYLLARRLFGRRAALLAALLLLTSPLLLLFGRLATPDALLLLFWTLALYALLRALE-- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 176 EKRKGWWLIVGV-VSLTIATQlHFVAFLGLPMIAVAYLLIKRP---LINWKYWLASIACIVFLYIPSIINDFKTGGSNII 251
Cdd:COG1807  157 RRRLRWLLLAGLaLGLGFLTK-GPVALLLPGLALLLYLLLTRRwrrLRRLRLLLGLLLALLLALPWYIANDWATGPAFLE 235

                 ..
gi 818317774 252 EF 253
Cdd:COG1807  236 YF 237
PMT_2 pfam13231
Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are ...
83-240 7.46e-11

Dolichyl-phosphate-mannose-protein mannosyltransferase; This family contains members that are not captured by pfam02366.


Pssm-ID: 433048 [Multi-domain]  Cd Length: 160  Bit Score: 60.74  E-value: 7.46e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774   83 PIFYYFGYVSAKVFGNTPSGIAVISLIFSCLTLPLFYLFVRRFFSKKIGLMLLGVFSVSIFLVLYSRFSwNPNN-LPFFI 161
Cdd:pfam13231   4 PLAAWLIALFTALFGDSEWAVRLPSALAGVLTILLLYLLARRLFGKRAALLAALLLAVVPLFVALSRLF-TPDApLLLFW 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  162 LGALYGLLRATDENekRKGWWLIVGVVsLTIATQLHFVAFLgLPMIAVAYLLI--KRPLINWKYWLASIACIVFLYIPSI 239
Cdd:pfam13231  83 ALALYFLLRALEKG--RLKWWLLAGAA-AGLGFLSKYTAAL-LVLAALLYLLIspGRRRLKSPKPYLGLLLALLLFSPVL 158

                  .
gi 818317774  240 I 240
Cdd:pfam13231 159 I 159
Stt3 COG1287
Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, ...
17-412 6.29e-07

Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440898 [Multi-domain]  Cd Length: 774  Bit Score: 52.49  E-value: 6.29e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  17 RFFVGAILIAILAVGVFLRAYNFSDWQHFELDQSR--DA----KVIDLAVENGVGDL---PLLGPKAAGSFLRLGPIFYY 87
Cdd:COG1287   13 RLLHLPALLLILALALWIRLLPYDNVFRDGGVYLGgnDPwyhlRQIEYILANGPSTLpfdPLTWYPWGRDIGQFGPLFDQ 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  88 FGYVSAKVFG-NTPSG------IAVISLIFSCLTLPLFYLFVRRFFSKKIGLMLLGVFSVSIFLVLYSRFSWNPNNL--P 158
Cdd:COG1287   93 LIALLALILGlGSPSQssvytvAAWFPPIFGALTVIPVYLLGRRLGGRKAGLLAALLLALSPGQLSRSLLGFADHHVaeL 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 159 FFILGALYGLLRATDENEKRKGWW--------------LIVGVVSLTIATQLHFVAFLGLPMI--AVAYLLIKRPLINWK 222
Cdd:COG1287  173 FFSTLAVLFLVLALKRAKREKRDLealkrpllyavlagVALGLYLLTWGGYVLFVGILALFALlqLLLDLLRGRSPEYLA 252
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 223 YWLASIACIVFLYIPSIINDFKTGGSNIIEFEKVFAKTSTKGEHTL--VEKIIRNIDKSSAGYVLLISGNSQA------- 293
Cdd:COG1287  253 IVGAVSFAVAALLVLPFIPRLGFSGTGLSLLQPLLALALAAGTVFLawLARELERRDLPRLYYPAALVGLVAAglallav 332
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 294 ELPKVK---IPRIRPIFTcdedcKKGVPMGI----------------FSLFFAIIGSALLGWNIFKTKETSrrdfLIIVA 354
Cdd:COG1287  333 LLPRVLaalIPGLRRFFG-----ASALAATIaeaqpltlsdlfssfgIAFFLALIGLLLLLYRPLRERRPE----LLFLL 403
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 818317774 355 IWVLVTLAL-FTpisydmAPRFFLLVAP-------IPFVYLGLILDFFEKRKAS--------VLSWVFVLILLA 412
Cdd:COG1287  404 VWALFSIYAaFT------QVRFLYYLAVavailaaIGLGELLDRLDLDKKKREAkkningvkILAVALIVLLLL 471
PMT COG4745
Predicted membrane-bound mannosyltransferase, involved in protein glycosylation [General ...
82-218 1.97e-05

Predicted membrane-bound mannosyltransferase, involved in protein glycosylation [General function prediction only];


Pssm-ID: 443779 [Multi-domain]  Cd Length: 550  Bit Score: 47.35  E-value: 1.97e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  82 GPIFYYFGYVSAKVFGNTPSGIAVISLIFSCLTLPLFYLFVRRFfsKKIGLMLLGVF-SVSIFLVLYSRFSWNPNNLPFF 160
Cdd:COG4745   67 GPFLYHVTAALFGLFGASDFTARLPVALVGGLLPLLALLLRERL--GDAEVLALALLlAFSPVLVYYSRFMRNDVLLAAF 144
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 161 ILGALYGLLRATDeneKRKGWWLIVGVVS--LTIATQLHFVAFLGLPMIAVAYLLIKRPL 218
Cdd:COG4745  145 TLLALGAAVRAID---TRRRRYLYLAAVAlaLAFATKENAVLYLLCWLGALLLLLDHRLF 201
PTPS COG5617
Predicted membrane glycosyltransferase TK1552, contains 6-pyruvoyl-tetrahydropterin synthase ...
82-241 1.29e-04

Predicted membrane glycosyltransferase TK1552, contains 6-pyruvoyl-tetrahydropterin synthase (PTPS)-related domain [General function prediction only];


Pssm-ID: 444348  Cd Length: 560  Bit Score: 44.84  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  82 GPIFYYFGYVSAKVFGNTPSGIAVISLIFSCLTLPLFYLFVRRFF-SKKIGLM--LLGVFSVSIFLVLYSRfswnpNNLP 158
Cdd:COG5617   76 PPLPYYLIALLSLLGLDFITAYKLFAILAIFLGGVGVYLFARLMTgSRKAAGIaaVLYLLSPYFLEDLYIR-----GALP 150
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774 159 F-----FILGALYGLLRAtdeNEKRKGWWLIVGVVSLTIATQLHFVAFLGLPMIAVAYLLI----------KRPLINWKY 223
Cdd:COG5617  151 EvlalaFLPLILLFLYRW---LKTGKKRWLILLALLLALLVLSHHLTAIFGTIFFIFFLLAlavmdrlrslKELLALIKA 227
                        170
                 ....*....|....*...
gi 818317774 224 WLASIACIVFLYIPSIIN 241
Cdd:COG5617  228 VLLGLGLTSFWLLPALEE 245
PMT pfam02366
Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of ...
65-234 1.24e-03

Dolichyl-phosphate-mannose-protein mannosyltransferase; This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is the Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as Swiss:O52327 are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.


Pssm-ID: 396786 [Multi-domain]  Cd Length: 245  Bit Score: 40.76  E-value: 1.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774   65 GDLPLLGPKAAGSFLRLGPiFYYFGYVSAkvfgntpSGIAVISLIFSCLTLPLFYLFVRRF-FSKKIGLMLLGVFSVSIF 143
Cdd:pfam02366  55 LGGRLAGYDGNFTFISIGG-QYYPGNVPY-------FGMRLFSALLGSLTVPLVYLTAKRLgFSKNTALLAALLVILENS 126
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 818317774  144 LVLYSRFSWNPNNLPFFILGALYGLLRATDENEKRKGW--WLIVGVVSLTIATQLHFVAFLGLPM--IAVAYLLIKRPLI 219
Cdd:pfam02366 127 FITLSRYILLDSPLLFFTTLSMYCFWKFERKAPFSRKWwlWLLLTGIALGLALSTKGVGLFTVLPvgLLTIWHLWQLLGD 206
                         170       180
                  ....*....|....*....|..
gi 818317774  220 -------NWKYWLASIACIVFL 234
Cdd:pfam02366 207 lslllksIWKHLFARLFCLIVI 228
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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