NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|752464390|gb|KIO42462|]
View 

beta-D-galactosidase [Escherichia coli O139:H28 str. E24377A]

Protein Classification

beta-galactosidase subunit alpha( domain architecture ID 11484666)

beta-galactosidase subunit alpha catalyzes hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides

CATH:  3.20.20.80
CAZY:  GH2
EC:  3.2.1.23
Gene Ontology:  GO:0004565|GO:0005975|GO:0009341

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
1-1021 0e+00

cryptic beta-D-galactosidase subunit alpha; Reviewed


:

Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 1978.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    1 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMW 80
Cdd:PRK10340    1 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLLLSGQWNFHFFDHPLYVPEAFTSELMSDWGHITVPAMW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   81 QMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF 160
Cdd:PRK10340   81 QMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGKQTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  161 DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAA 240
Cdd:PRK10340  161 DISAMVKTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTHINDFTVRTDFDEDYCDATLSCEVVLENLAA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  241 SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDI 320
Cdd:PRK10340  241 SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  321 KVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV 400
Cdd:PRK10340  321 KVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  401 ESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA 480
Cdd:PRK10340  401 ESHGFANVGDISRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  481 EVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVW 560
Cdd:PRK10340  481 EVVDVISTMYTRVELMNEFGEYPHPKPRILCEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVW 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  561 YKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHALDLTRGELKVENKLWFTTLDDYTLHAEVRVEGET 640
Cdd:PRK10340  561 YKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYKQVIAPVKIHALDLTRGELKVENKLWFTNLDDYTLHAEVRAEGET 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  641 LATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE 720
Cdd:PRK10340  641 LASGQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE 720
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  721 DDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD 800
Cdd:PRK10340  721 EDRLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD 800
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  801 GEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADS 880
Cdd:PRK10340  801 GEVLIISRTVIAPPVFDFGMRCTYIYRIAADGQVNVALSGERYGDYPHMIPCIGFTMGINGEYDQVAYYGRGPGENYADS 880
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  881 QQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDI 960
Cdd:PRK10340  881 QQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHTNELQKSDYI 960
                         970       980       990      1000      1010      1020
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 752464390  961 TLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFS 1021
Cdd:PRK10340  961 TLNLDHQLLGLGSNSWGSEVLDSYRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFS 1021
 
Name Accession Description Interval E-value
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
1-1021 0e+00

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 1978.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    1 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMW 80
Cdd:PRK10340    1 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLLLSGQWNFHFFDHPLYVPEAFTSELMSDWGHITVPAMW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   81 QMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF 160
Cdd:PRK10340   81 QMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGKQTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  161 DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAA 240
Cdd:PRK10340  161 DISAMVKTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTHINDFTVRTDFDEDYCDATLSCEVVLENLAA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  241 SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDI 320
Cdd:PRK10340  241 SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  321 KVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV 400
Cdd:PRK10340  321 KVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  401 ESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA 480
Cdd:PRK10340  401 ESHGFANVGDISRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  481 EVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVW 560
Cdd:PRK10340  481 EVVDVISTMYTRVELMNEFGEYPHPKPRILCEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVW 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  561 YKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHALDLTRGELKVENKLWFTTLDDYTLHAEVRVEGET 640
Cdd:PRK10340  561 YKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYKQVIAPVKIHALDLTRGELKVENKLWFTNLDDYTLHAEVRAEGET 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  641 LATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE 720
Cdd:PRK10340  641 LASGQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE 720
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  721 DDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD 800
Cdd:PRK10340  721 EDRLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD 800
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  801 GEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADS 880
Cdd:PRK10340  801 GEVLIISRTVIAPPVFDFGMRCTYIYRIAADGQVNVALSGERYGDYPHMIPCIGFTMGINGEYDQVAYYGRGPGENYADS 880
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  881 QQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDI 960
Cdd:PRK10340  881 QQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHTNELQKSDYI 960
                         970       980       990      1000      1010      1020
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 752464390  961 TLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFS 1021
Cdd:PRK10340  961 TLNLDHQLLGLGSNSWGSEVLDSYRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFS 1021
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
46-621 1.20e-166

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 503.91  E-value: 1.20e-166
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   46 GQWNFHFFDHPLQVPEAFTSelmADWGHITVPAMWQMEGHGKLQytdegfpfpidvPFVPS---DNPTGAYQRIFTLSDG 122
Cdd:COG3250     1 GGWKFRLGDAPEGAKPDFDD---SGWDPITVPGDWELDLYGLPD------------PFVGPwylYNGVGWYRRTFTVPAS 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  123 WQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVY 202
Cdd:COG3250    66 WKGKRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDGSYLEGQDWWRTSGIYRDVW 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  203 LVGKHLTHINDFTVRTDFDEAycDATLSCEVVLENLAASPVvtTLEYTLFD--GERVVHSSAIDHLAIEKLTSASFAFTV 280
Cdd:COG3250   146 LEATPKVHIEDVFVTPDLDDG--SATLTVEVELENESDAGV--TVEVTLLDadGKVVATATAKVTLAAGEENTVTLTLTV 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  281 EQPQQWSAESPYLYHLVMTLKDaNGNVLEVVPQRVGFRDIKVRD-GLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEK 359
Cdd:COG3250   222 PNPKLWSPEDPNLYTLVVTLKD-DGKVVDTVSTRFGFRTIEIDGdGGFLLNGKPVFLKGVNRHEDWPDDGRAVTDEAMRR 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  360 DLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFAnvgdisriTDDPQWEKVYVERIVRHIHAQKNHP 439
Cdd:COG3250   301 DLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGML--------GDDPEFLEAVEAELREMVRRDRNHP 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  440 SIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVhyeedrdaevvdiistmytrvplmnefgeyphpkpRIICEYAHAMGN 519
Cdd:COG3250   373 SIILWSGGNESGGGPNFAALYEWVKELDPTRPV-----------------------------------RFLSEYGHAMPN 417
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  520 GPGG----------------LTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDdngnvwykfggdygdypNNYNFCLDGLI- 582
Cdd:COG3250   418 SLGGgyhqpsdfeeyqalqaLEEYWEAFRRRPRLAGGFIWQLNDYWPEPRD-----------------NDGNFCSWGLVd 480
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 752464390  583 YSDQTPGPGLKEYKQVIAPVKIhaldlTRGELKVENKLW 621
Cdd:COG3250   481 YYDRTPKPAYYEVKSAWQPVLV-----SDGMLHILLPHW 514
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
320-604 3.90e-151

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 450.75  E-value: 3.90e-151
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   320 IKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETD 399
Cdd:pfam02836    1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   400 VESHGFAN-VGDI----SRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHY 474
Cdd:pfam02836   81 LETHGLWQkFGEIepsySELTDNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNESGAGENIAAMYAATKSLDPTRPVHY 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   475 EED-RDAEVVDII----STMYTRVPLMNEFGEYPHP------KPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVW 543
Cdd:pfam02836  161 EGVgIDPEVDDIIldiySRMYEDYGHPEVIEKYLEDwykkpqKPIIICEYGHAMGNSPGGLQEYQDLFYKYPEYQGGFIW 240
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 752464390   544 EWCDHGIQAQDDN-GNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKI 604
Cdd:pfam02836  241 DWHDQGIQKRDPNvGGEWYWYGGDFGDRPSDYRFCGNGLFFADRTPKPALFELKKRYWPIKI 302
Bgal_small_N smart01038
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
729-997 9.98e-111

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 214988 [Multi-domain]  Cd Length: 272  Bit Score: 344.18  E-value: 9.98e-111
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    729 RGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHK----QEYEGLWQPNHLQIMQEHLRDFAVEQsDGEVL 804
Cdd:smart01038    1 SGGGFSYTFDKATGALTSWTYNGKELLLRGPKPNFWRAPTDNDRgngpNAWAARWKAAGLDRLTTRVRSVEVEQ-DSDVV 79
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    805 IISRTVIAPPVfDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQAN 884
Cdd:smart01038   80 VTVEYLLAAPS-GWGFTVTVTYTIDGDGEVKVDVTFTPGGGALPDLPRIGLRFRLPDELEQVEWYGRGPGENYPDRKQSA 158
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    885 IIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDITLNL 964
Cdd:smart01038  159 RLGRYSSTVDDLFTPYVRPQENGNRTDVRWLTLTDDAGNGLRVTADQPFSFSALPYSAEDLEEAKHPHELPPRDGTVLNL 238
                           250       260       270
                    ....*....|....*....|....*....|....
gi 752464390    965 DHQLLGLGS-NSWGSEVLDSWRVWFRDFSYGFTL 997
Cdd:smart01038  239 DAKQMGVGGdDSWGPGVLPEYRLPADEYSFSFTL 272
 
Name Accession Description Interval E-value
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
1-1021 0e+00

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 1978.75  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    1 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMW 80
Cdd:PRK10340    1 MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLLLSGQWNFHFFDHPLYVPEAFTSELMSDWGHITVPAMW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   81 QMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF 160
Cdd:PRK10340   81 QMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGKQTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  161 DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAA 240
Cdd:PRK10340  161 DISAMVKTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTHINDFTVRTDFDEDYCDATLSCEVVLENLAA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  241 SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDI 320
Cdd:PRK10340  241 SPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  321 KVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV 400
Cdd:PRK10340  321 KVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  401 ESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA 480
Cdd:PRK10340  401 ESHGFANVGDISRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDA 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  481 EVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVW 560
Cdd:PRK10340  481 EVVDVISTMYTRVELMNEFGEYPHPKPRILCEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNGNVW 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  561 YKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHALDLTRGELKVENKLWFTTLDDYTLHAEVRVEGET 640
Cdd:PRK10340  561 YKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYKQVIAPVKIHALDLTRGELKVENKLWFTNLDDYTLHAEVRAEGET 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  641 LATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE 720
Cdd:PRK10340  641 LASGQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLE 720
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  721 DDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD 800
Cdd:PRK10340  721 EDRLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSD 800
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  801 GEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADS 880
Cdd:PRK10340  801 GEVLIISRTVIAPPVFDFGMRCTYIYRIAADGQVNVALSGERYGDYPHMIPCIGFTMGINGEYDQVAYYGRGPGENYADS 880
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  881 QQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDI 960
Cdd:PRK10340  881 QQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHTNELQKSDYI 960
                         970       980       990      1000      1010      1020
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 752464390  961 TLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFS 1021
Cdd:PRK10340  961 TLNLDHQLLGLGSNSWGSEVLDSYRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFS 1021
lacZ PRK09525
beta-galactosidase;
4-984 0e+00

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 781.04  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    4 WENIQLTHENRLAPRAYFFSYDSVAQARtfARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQME 83
Cdd:PRK09525   17 WENPGVTQLNRLPAHPPFASWRNSEAAR--DDRPSQQRQSLNGEWRFSYFPAPEAVPESWLECDLPDADTIPVPSNWQLH 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   84 GHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGW-QGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDI 162
Cdd:PRK09525   95 GYDAPIYTNVTYPIPVNPPFVPEENPTGCYSLTFTVDESWlQSGQTRIIFDGVNSAFHLWCNGRWVGYSQDSRLPAEFDL 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  163 SAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEV-VLENLAAS 241
Cdd:PRK09525  175 SPFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQLSDFHITTELDDDFRRAVLEVEAqVNGELRDE 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  242 PVVTTleyTLFDGERVV-------HSSAIDhlaiEKLT---SASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVV 311
Cdd:PRK09525  255 LRVTV---QLWDGETLVasgtapfGTEIID----ERGAyadRVTLRLNVENPKLWSAETPNLYRAVVSLLDADGTLIEAE 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  312 PQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYG 391
Cdd:PRK09525  328 AYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWYELCDRYG 407
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  392 LFVMAETDVESHGfanVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRL 471
Cdd:PRK09525  408 LYVVDEANIETHG---MVPMNRLSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHGANHDALYRWIKSNDPSRP 484
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  472 VHYE-EDRDAEVVDIISTMYTRVplmNEFGEYP-HPK--------------PRIICEYAHAMGNGPGGLTEYQNVFYKHD 535
Cdd:PRK09525  485 VQYEgGGADTAATDIICPMYARV---DEDQPFPaVPKwsikkwislpgetrPLILCEYAHAMGNSLGGFAKYWQAFRQYP 561
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  536 CIQGHYVWEWCDHGIQAQDDNGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHALDLTRGELK 615
Cdd:PRK09525  562 RLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFPDRTPHPALYEAKHAQQFFQFSLLSTTPLTIE 641
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  616 VENKLWFTTLDDYTLHAEVRVEGETLATQQIKLrDVAPNSEapLQITLPQL----DAREAFLNITVTKDSRTRYSEAGHS 691
Cdd:PRK09525  642 VTSEYLFRHSDNELLHWSVALDGKPLASGEVPL-DLAPQGS--QRITLPELpqpeSAGQLWLNVEVVQPNATAWSEAGHR 718
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  692 IATYQFPLKENTAQPVPFAPNNARPLTLEDDRLscTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDN- 770
Cdd:PRK09525  719 SAWQQWRLPEPLSLPLPTASHAAPQLTQDEQDF--CIELGNQRWQFNRQSGLLSQWWVGGKEQLLTPLRDQFTRAPLDNd 796
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  771 ---------------HKQEYEGL--WQPNHLQIMQEHLRDfAVE-------QSDGEVLIISRtviappvfdfgmrctYIW 826
Cdd:PRK09525  797 igvseatridpnawvERWKAAGLyqLEARLLQCDADTLAD-AVLittehayQHQGKTLFISR---------------KTY 860
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  827 RIAADGQVNVALSGERYGDYPHiIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNN 906
Cdd:PRK09525  861 RIDGQGEMTIDVDVEVASDLPP-PARIGLTCQLAQVAERVSWLGLGPHENYPDRLLAACFGRWDLPLSDMHTPYIFPSEN 939
                         970       980       990      1000      1010      1020      1030
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 752464390  907 GNRQHVRWTALTNRHGNGllvvpqrPINFSAWRYTQENIHAAQHCNELQRSDDITLNLDHQLLGLGSNswgsevlDSW 984
Cdd:PRK09525  940 GLRCGTRELNYGRHQIRG-------DFHFNISRYSQQQLMETSHRHLLQAEEGTWLNIDGFHMGVGGD-------DSW 1003
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
46-621 1.20e-166

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 503.91  E-value: 1.20e-166
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   46 GQWNFHFFDHPLQVPEAFTSelmADWGHITVPAMWQMEGHGKLQytdegfpfpidvPFVPS---DNPTGAYQRIFTLSDG 122
Cdd:COG3250     1 GGWKFRLGDAPEGAKPDFDD---SGWDPITVPGDWELDLYGLPD------------PFVGPwylYNGVGWYRRTFTVPAS 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  123 WQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVY 202
Cdd:COG3250    66 WKGKRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPGENVLAVRVDNPSDGSYLEGQDWWRTSGIYRDVW 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  203 LVGKHLTHINDFTVRTDFDEAycDATLSCEVVLENLAASPVvtTLEYTLFD--GERVVHSSAIDHLAIEKLTSASFAFTV 280
Cdd:COG3250   146 LEATPKVHIEDVFVTPDLDDG--SATLTVEVELENESDAGV--TVEVTLLDadGKVVATATAKVTLAAGEENTVTLTLTV 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  281 EQPQQWSAESPYLYHLVMTLKDaNGNVLEVVPQRVGFRDIKVRD-GLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEK 359
Cdd:COG3250   222 PNPKLWSPEDPNLYTLVVTLKD-DGKVVDTVSTRFGFRTIEIDGdGGFLLNGKPVFLKGVNRHEDWPDDGRAVTDEAMRR 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  360 DLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFAnvgdisriTDDPQWEKVYVERIVRHIHAQKNHP 439
Cdd:COG3250   301 DLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHGML--------GDDPEFLEAVEAELREMVRRDRNHP 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  440 SIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVhyeedrdaevvdiistmytrvplmnefgeyphpkpRIICEYAHAMGN 519
Cdd:COG3250   373 SIILWSGGNESGGGPNFAALYEWVKELDPTRPV-----------------------------------RFLSEYGHAMPN 417
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  520 GPGG----------------LTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDdngnvwykfggdygdypNNYNFCLDGLI- 582
Cdd:COG3250   418 SLGGgyhqpsdfeeyqalqaLEEYWEAFRRRPRLAGGFIWQLNDYWPEPRD-----------------NDGNFCSWGLVd 480
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 752464390  583 YSDQTPGPGLKEYKQVIAPVKIhaldlTRGELKVENKLW 621
Cdd:COG3250   481 YYDRTPKPAYYEVKSAWQPVLV-----SDGMLHILLPHW 514
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
320-604 3.90e-151

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 450.75  E-value: 3.90e-151
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   320 IKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETD 399
Cdd:pfam02836    1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   400 VESHGFAN-VGDI----SRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHY 474
Cdd:pfam02836   81 LETHGLWQkFGEIepsySELTDNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNESGAGENIAAMYAATKSLDPTRPVHY 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   475 EED-RDAEVVDII----STMYTRVPLMNEFGEYPHP------KPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVW 543
Cdd:pfam02836  161 EGVgIDPEVDDIIldiySRMYEDYGHPEVIEKYLEDwykkpqKPIIICEYGHAMGNSPGGLQEYQDLFYKYPEYQGGFIW 240
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 752464390   544 EWCDHGIQAQDDN-GNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKI 604
Cdd:pfam02836  241 DWHDQGIQKRDPNvGGEWYWYGGDFGDRPSDYRFCGNGLFFADRTPKPALFELKKRYWPIKI 302
Bgal_small_N smart01038
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
729-997 9.98e-111

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 214988 [Multi-domain]  Cd Length: 272  Bit Score: 344.18  E-value: 9.98e-111
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    729 RGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHK----QEYEGLWQPNHLQIMQEHLRDFAVEQsDGEVL 804
Cdd:smart01038    1 SGGGFSYTFDKATGALTSWTYNGKELLLRGPKPNFWRAPTDNDRgngpNAWAARWKAAGLDRLTTRVRSVEVEQ-DSDVV 79
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    805 IISRTVIAPPVfDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQAN 884
Cdd:smart01038   80 VTVEYLLAAPS-GWGFTVTVTYTIDGDGEVKVDVTFTPGGGALPDLPRIGLRFRLPDELEQVEWYGRGPGENYPDRKQSA 158
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    885 IIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDITLNL 964
Cdd:smart01038  159 RLGRYSSTVDDLFTPYVRPQENGNRTDVRWLTLTDDAGNGLRVTADQPFSFSALPYSAEDLEEAKHPHELPPRDGTVLNL 238
                           250       260       270
                    ....*....|....*....|....*....|....
gi 752464390    965 DHQLLGLGS-NSWGSEVLDSWRVWFRDFSYGFTL 997
Cdd:smart01038  239 DAKQMGVGGdDSWGPGVLPEYRLPADEYSFSFTL 272
Bgal_small_N pfam02929
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
729-997 4.20e-79

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 460751  Cd Length: 223  Bit Score: 257.42  E-value: 4.20e-79
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   729 RGYNFAITFSKMSGKPTSWQVNGESLLT--REPKINFFKPMIDNHkqeyeglwqpnhlqimqehlrdfaveqsdgevlii 806
Cdd:pfam02929    1 SGGDFSYTFDKATGTLTSYKYDGKELLTepLTGRPNFWRAPTDND----------------------------------- 45
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   807 srtviappvfdfgmrCTYIWRIAADGQVNVALSGERYG-DYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANI 885
Cdd:pfam02929   46 ---------------VTVTYTIYGDGTIKVDVTLKPDGlKGLPELPRFGLRLQLPKSFEQVEWYGRGPGENYPDRKTGAR 110
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   886 IDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLV-VPQRPINFSAWRYTQENIHAAQHCNELQRSDDITLNL 964
Cdd:pfam02929  111 LGIYESTVDDLFTPYIRPQENGNRTDVRWLTLTDGDGGGLLVfVGDGPFSFSALPYTPEELEAAKHPYELPKSDETVLNL 190
                          250       260       270
                   ....*....|....*....|....*....|...
gi 752464390   965 DHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTL 997
Cdd:pfam02929  191 DYAQMGVGDNSWGPGVLPEYRLPAKEYSFSFTL 223
Glyco_hydro_2_N pfam02837
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ...
44-203 1.21e-48

Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.


Pssm-ID: 397120 [Multi-domain]  Cd Length: 169  Bit Score: 170.50  E-value: 1.21e-48
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390    44 LSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGhgklQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGW 123
Cdd:pfam02837    4 LNGEWAFALFDAPCGAPQSWWESALQESRTIAVPSSWNDQP----IYTNVEYPIDFADPFIPTYNGTGWYQRTFFIPSKW 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   124 QGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQ------DMWWSAGI 197
Cdd:pfam02837   80 AGQRIRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVIAGKNRIAVKVLNWSDG*YIEDQngkyfhDFWNYSGI 159

                   ....*.
gi 752464390   198 FRDVYL 203
Cdd:pfam02837  160 YRDVSL 165
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
113-547 2.10e-40

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 158.63  E-value: 2.10e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  113 YQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNL-LCVRVMQWADST------Y 185
Cdd:PRK10150   69 YQREVFIPKGWAGQRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVrITVCVNNELNWQtlppgnV 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  186 VEDQ----------DMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVlenlaASPVVTTLEYTLFDGE 255
Cdd:PRK10150  149 IEDGngkkkqkynfDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLNHASVDWSVE-----TNGDVDSVSVTLRDAD 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  256 RVVhssaidhlaIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDAnGNVLEVVPQRVGFRDIKVRDGLFWINNRYVM 335
Cdd:PRK10150  224 GQV---------VATGQGTSGTLQVVNPHLWQPGEGYLYTLCVELAKS-GTECDTYPLRFGIRSVAVKGGQFLINGKPFY 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  336 LHGVNRHDNDHRKGRavGMDRVE--KDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDV----ESHGFA--- 406
Cdd:PRK10150  294 FKGFGKHEDADIRGK--GLDEVLnvHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAvglnLSFGAGlea 371
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  407 ---NVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNE-SGYGCNIRA----MYHAAKALDDTR-------- 470
Cdd:PRK10150  372 gnkPKETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEpASREQGAREyfapLAELTRKLDPTRpvtcvnvm 451
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  471 LVHYEEDRDAEVVDIIS-----TMYT--------RVPLMNEFGEYP--HPKPRIICEYA-------HAMGNGPGGlTEYQ 528
Cdd:PRK10150  452 FATPDTDTVSDLVDVLClnryyGWYVdsgdletaEKVLEKELLAWQekLHKPIIITEYGadtlaglHSMYDDMWS-EEYQ 530
                         490       500
                  ....*....|....*....|....*..
gi 752464390  529 NVFYK--H------DCIQGHYVWEWCD 547
Cdd:PRK10150  531 CAFLDmyHrvfdrvPAVVGEQVWNFAD 557
LacZ_4 pfam16353
Beta-galactosidase, domain 4; This entry represents domain 4 found in beta-galactosidase and ...
614-700 1.03e-20

Beta-galactosidase, domain 4; This entry represents domain 4 found in beta-galactosidase and it is organized in a jelly-roll type barrel (Rutkiewicz-Krotewicz M. et al. Crystals 2018, 8(1), 13, https://doi.org/10.3390/cryst8010013).


Pssm-ID: 465101 [Multi-domain]  Cd Length: 88  Bit Score: 87.24  E-value: 1.03e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   614 LKVENKLWFTTLDDYTLHAEVRVEGETLATQQIKLRDVAPNSEAplQITLPQL---DAREAFLNITVTKDSRTRYSEAGH 690
Cdd:pfam16353    1 VTITNRYDFTDLDDYDLSWELLADGKVVASGTLELPDVAPGESA--TVTLPLPlpgLAGEYFLTVSFRLKEDTPWAPAGH 78
                           90
                   ....*....|
gi 752464390   691 SIATYQFPLK 700
Cdd:pfam16353   79 EVAWEQFPLP 88
Glyco_hydro_2 pfam00703
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ...
209-318 1.47e-19

Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 395572 [Multi-domain]  Cd Length: 106  Bit Score: 84.83  E-value: 1.47e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390   209 THINDFTVRTDFDEAyCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFafTVEQPQQWSA 288
Cdd:pfam00703    1 VHIEDVFITPDLDDD-KTAKVTVEVELENDGDASVEVTLETEIKDADGKTVAAAAKVLVLGAGETTEL--EVKNPKLWSP 77
                           90       100       110
                   ....*....|....*....|....*....|
gi 752464390   289 ESPYLYHLVMTLkDANGNVLEVVPQRVGFR 318
Cdd:pfam00703   78 ETPNLYTLTVEL-DKDGKVIDEVSTRFGFR 106
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
889-1000 3.80e-10

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 64.01  E-value: 3.80e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 752464390  889 WRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWRYTQENIHAAQHCNELQRSDDITLNLDHQL 968
Cdd:COG3250   524 YSSTVADLYTPYVRPQENGNRTDVRWLTLTNGKGKGLLVSGVPLLSGSALAYLTEDLLAAKEEGLLLAADLTTLLLDLAD 603
                          90       100       110
                  ....*....|....*....|....*....|..
gi 752464390  969 LGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPV 1000
Cdd:COG3250   604 LGGGGNSGGGLLLLGGLLVEKDLSLAALLLAA 635
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH