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Concise Results
Standard Results
Full Results
lysine decarboxylase, constitutive [Klebsiella pneumoniae CHS 80]
Protein Classification
lysine decarboxylase LdcC ( domain architecture ID 11487770 )
lysine decarboxylase LdcC catalyzes the conversion from L-lysine to cadaverine; constitutively but weakly expressed under various conditions
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
14-725
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1605.94
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 14 NIIAIMGPHGV YH KDEPIKELE A ALQ R QGFQTIWPQNS A DLL Q FIEHNPRICGVIFDWDEYS V DLCSDINQLNEYLPLYA 93
Cdd:PRK15399 2 NIIAIMGPHGV FY KDEPIKELE S ALQ A QGFQTIWPQNS V DLL K FIEHNPRICGVIFDWDEYS L DLCSDINQLNEYLPLYA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 94 FIN A HSTMDVS S QD L RM T LWFFEYALG LS E E IA T RI G QYT R EYL E NITPPFT R ALF N YV Q EGKYTFCTPGHMGG S AYQKS 173
Cdd:PRK15399 82 FIN T HSTMDVS V QD M RM A LWFFEYALG AA E D IA I RI R QYT N EYL D NITPPFT K ALF T YV K EGKYTFCTPGHMGG T AYQKS 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 174 PVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR A FGAEQSY M VTNGTSTSNKIVGMY S APAGSTLLID 253
Cdd:PRK15399 162 PVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR T FGAEQSY I VTNGTSTSNKIVGMY A APAGSTLLID 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 254 RNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIPRREFTRDSI QQ KV RD T GG AQWPVHAVITNSTYDGLLYNT T W L K E T 333
Cdd:PRK15399 242 RNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIPRREFTRDSI EE KV AA T TQ AQWPVHAVITNSTYDGLLYNT D W I K Q T 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 334 LDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER I PGKVIFETQSTHKMLAA L SQASLIHIKG N YDEETFNEAFMMHTSTSP 413
Cdd:PRK15399 322 LDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER V PGKVIFETQSTHKMLAA F SQASLIHIKG E YDEETFNEAFMMHTSTSP 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 414 SYPIVAS I ETAAAMLRGN S GKRLI Q RS I ERAL D FRKEVQRLREESDGWFFDIWQPE A VD K AECWPVAPGE D WHGFKDADA 493
Cdd:PRK15399 402 SYPIVAS V ETAAAMLRGN P GKRLI N RS V ERAL H FRKEVQRLREESDGWFFDIWQPE N VD E AECWPVAPGE Q WHGFKDADA 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 494 DHM Y LDPVKVTILTPGMDEQGNM D EEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAYD 573
Cdd:PRK15399 482 DHM F LDPVKVTILTPGMDEQGNM S EEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAYD 561
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 574 LNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH R LIR Q H Q LP Q LML S AFDVLPEM K MTPH H AWQRQIKGEVET IE LE N LV 653
Cdd:PRK15399 562 LNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH K LIR K H D LP G LML R AFDVLPEM I MTPH Q AWQRQIKGEVET VA LE Q LV 641
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 636340345 654 GR I SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG R HYPGFETDIHGAKRDEDGVYRVRVLK NDE 725
Cdd:PRK15399 642 GR V SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG Q HYPGFETDIHGAKRDEDGVYRVRVLK MAG 713
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
14-725
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1605.94
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 14 NIIAIMGPHGV YH KDEPIKELE A ALQ R QGFQTIWPQNS A DLL Q FIEHNPRICGVIFDWDEYS V DLCSDINQLNEYLPLYA 93
Cdd:PRK15399 2 NIIAIMGPHGV FY KDEPIKELE S ALQ A QGFQTIWPQNS V DLL K FIEHNPRICGVIFDWDEYS L DLCSDINQLNEYLPLYA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 94 FIN A HSTMDVS S QD L RM T LWFFEYALG LS E E IA T RI G QYT R EYL E NITPPFT R ALF N YV Q EGKYTFCTPGHMGG S AYQKS 173
Cdd:PRK15399 82 FIN T HSTMDVS V QD M RM A LWFFEYALG AA E D IA I RI R QYT N EYL D NITPPFT K ALF T YV K EGKYTFCTPGHMGG T AYQKS 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 174 PVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR A FGAEQSY M VTNGTSTSNKIVGMY S APAGSTLLID 253
Cdd:PRK15399 162 PVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR T FGAEQSY I VTNGTSTSNKIVGMY A APAGSTLLID 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 254 RNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIPRREFTRDSI QQ KV RD T GG AQWPVHAVITNSTYDGLLYNT T W L K E T 333
Cdd:PRK15399 242 RNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIPRREFTRDSI EE KV AA T TQ AQWPVHAVITNSTYDGLLYNT D W I K Q T 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 334 LDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER I PGKVIFETQSTHKMLAA L SQASLIHIKG N YDEETFNEAFMMHTSTSP 413
Cdd:PRK15399 322 LDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER V PGKVIFETQSTHKMLAA F SQASLIHIKG E YDEETFNEAFMMHTSTSP 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 414 SYPIVAS I ETAAAMLRGN S GKRLI Q RS I ERAL D FRKEVQRLREESDGWFFDIWQPE A VD K AECWPVAPGE D WHGFKDADA 493
Cdd:PRK15399 402 SYPIVAS V ETAAAMLRGN P GKRLI N RS V ERAL H FRKEVQRLREESDGWFFDIWQPE N VD E AECWPVAPGE Q WHGFKDADA 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 494 DHM Y LDPVKVTILTPGMDEQGNM D EEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAYD 573
Cdd:PRK15399 482 DHM F LDPVKVTILTPGMDEQGNM S EEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAYD 561
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 574 LNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH R LIR Q H Q LP Q LML S AFDVLPEM K MTPH H AWQRQIKGEVET IE LE N LV 653
Cdd:PRK15399 562 LNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH K LIR K H D LP G LML R AFDVLPEM I MTPH Q AWQRQIKGEVET VA LE Q LV 641
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 636340345 654 GR I SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG R HYPGFETDIHGAKRDEDGVYRVRVLK NDE 725
Cdd:PRK15399 642 GR V SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG Q HYPGFETDIHGAKRDEDGVYRVRVLK MAG 713
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
142-557
0e+00
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 685.00
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 142 PP FTR ALF N YV QE G K YTF CT PGH M GG SAY QK S P V G CL FYDFFG G N T L KA DV S I SVT ELG S LLDH T G PHL EA EE Y I AR A FG 221
Cdd:pfam01276 1 PP LYK ALF K YV RR G N YTF HC PGH Q GG AGF QK H P A G RF FYDFFG E N L L RI DV C I EDV ELG D LLDH E G AIK EA QK Y A AR V FG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 222 A EQ SY M V T NGTS T SNK I VGM YSAPA G S T L LIDRNCHKS LA H L LM M S DVV P LW L K P T RNA L GI L GGIP RR EF TRDSIQQKV 301
Cdd:pfam01276 81 A DK SY F V V NGTS G SNK T VGM AVCTP G D T I LIDRNCHKS IH H A LM L S GAT P VY L E P S RNA Y GI I GGIP LH EF QEETLKEAI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 302 RDTGG A QW P VH AVITN S TYDG L LYN TTWLKE TL DVP S -- I H FDSAWV P Y TH F H PIY QGK S G M S GE RIP G KV IF E TQS T HK 379
Cdd:pfam01276 161 AEVPD A KG P RL AVITN P TYDG V LYN AKEIVD TL HHL S dp I L FDSAWV G Y EQ F I PIY ADA S P M G GE NEN G PG IF V TQS V HK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 380 M LAALSQAS L IH I K GN -- YDEET FNEAFMMH TS TSPSYPI V AS IET AA A ML R GNSG K RL IQRSI ERA LD FRK EVQ rlr EE 457
Cdd:pfam01276 241 L LAALSQAS Y IH K K EG hi VNHDR FNEAFMMH AT TSPSYPI F AS LDV AA K ML E GNSG R RL WNECV ERA IE FRK AID --- TL 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 458 SDGW FF DI W Q PE A VD KA ECWP VA PGE D WHGF KDADADHMY LDP V K V TILTPGMDE Q G NMD E E G I PA AL VAK F L D E R G V V V 537
Cdd:pfam01276 318 NNCE FF RP W N PE I VD GK ECWP FH PGE T WHGF EGYADNQYF LDP C K L TILTPGMDE D G EYS E F G V PA TI VAK W L R E N G I V P 397
410 420
....*....|....*....|
gi 636340345 538 EKT GPY N L LFLF SI G I D K T R 557
Cdd:pfam01276 398 EKT DLN N I LFLF TP G E D R T K 417
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
136-723
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 559.34
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 136 Y LENITP P FTR AL FN Y VQE G KYT F CT PGH M GG SAY qkspv G CL FYDFFG G N TLKA D VSI s VTE L GS L L D HT G PHL EA E E Y 215
Cdd:COG1982 1 Y MDQLLT P LFD AL KK Y AER G PVS F HV PGH K GG RGF ----- G RE FYDFFG E N VFRL D LTE - LPG L DD L H D PE G VIK EA Q E L 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 216 I A R AFGA EQSYMVT NGTS TS NK IVGMYSAPA G STL L ID RNCHKS LA H L L MM S DVV P LW L K P T - R N A LGI L GGI PRREFTR 294
Cdd:COG1982 75 A A E AFGA DRTFFLV NGTS SG NK AMILAVCGP G DKV L VP RNCHKS VI H G L IL S GAI P VY L N P E i D N E LGI I GGI TPEAVEE 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 295 DS I QQK vrdtggaq WPVHAV ITN S TY D G LL Y NTTWLK E TLD -- VPSIHF D S A WVPYTH FHP IYQ g K S G M S gerip GKVIF 372
Cdd:COG1982 155 AL I EHP -------- DAKAVL ITN P TY Y G VC Y DLKAIA E LAH eh GIPVLV D E A HGAHFG FHP DLP - R S A M E ----- AGADL 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 373 ET QSTHK M L A AL S Q A S LI H I KG NY - D E E TF NEA F M MHT STSPSY PIV AS IET A AAMLR G N s G KR L IQRSI E R A LDF RKE V 451
Cdd:COG1982 221 VV QSTHK T L G AL T Q S S ML H V KG GR v D H E RV NEA L M LLQ STSPSY LLM AS LDV A RRQMA G E - G EE L LDEAL E L A IEA RKE I 299
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 452 QRL reesdg WFFDIWQ PE AVD kaecwpvapgedwhgfkda DADHMY LDP V K V TI LT PG M deqgnmdee GI PAAL VA KF L D 531
Cdd:COG1982 300 NKI ------ PGLYVFG PE DLG ------------------- APGVYD LDP T K L TI DV PG L --------- GI SGYE VA EY L R 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 532 E R - G VV VE KTGP YN L LFL F S I G ID K TRAMG L LRG L T E F KR A YD L N LRVKNM LP D lyaedpdfyrnmriqdlaqgihrlir 610
Cdd:COG1982 346 E E y G IQ VE LADL YN I LFL L S L G DT K EDIER L VAA L K E L KR L YD K N APLEEV LP L -------------------------- 399
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 611 qhqlpqlmls AF DV LPE MK M T P HH A WQ rqik G E V E TIE LE NL VGRI S A N M IL PYPPG V PLLMPGE M ITEE sra V L D F L LM 690
Cdd:COG1982 400 ---------- AF PP LPE LV M S P RE A FF ---- A E T E LVP LE EA VGRI A A E M VI PYPPG I PLLMPGE R ITEE --- V I D Y L RA 462
570 580 590
....*....|....*....|....*....|...
gi 636340345 691 L CSI G RHY PGFE tdihgakrd EDGVYRV RV L K N 723
Cdd:COG1982 463 L EEA G GRF PGFE --------- DPELRTI RV V K E 486
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
143-453
1.19e-132
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 393.92
E-value: 1.19e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 143 P FTR AL FN Y VQE G KYT F CT PGH M GG SAYQ KS pvgcl FY D F F G G N TL KADV SI s V T E L GS LLD H TGP HL EA E E YI ARAFGA 222
Cdd:cd00615 1 P LFE AL KE Y AKR G IIS F HV PGH K GG RGFR KS ----- FY E F Y G E N LF KADV TE - L T G L DD LLD P TGP IK EA Q E LA ARAFGA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 223 EQSYMVT NGTS T SNK I V GMYSAPA G STL LIDRNCHKS LAHL L MM S DV VP LW LKP T RN A - L GI L GGIP RRE F TRDS I Q qkv 301
Cdd:cd00615 75 KHTFFLV NGTS S SNK A V ILAVCGP G DKI LIDRNCHKS VING L VL S GA VP VY LKP E RN P y Y GI A GGIP PET F KKAL I E --- 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 302 rdtgg AQWPVH AVITN S TY D G LL YN TTWLK E TLD -- VPSIHF D S A WVPYTH FHPI YQGKSG M S G eripgk VIFET QSTHK 379
Cdd:cd00615 152 ----- HPDAKA AVITN P TY Y G IC YN LRKIV E EAH hr GLPVLV D E A HGAHFR FHPI LPSSAA M A G ------ ADIVV QSTHK 220
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 636340345 380 M L A AL S Q A S L IH I KG NY - DEETF NEA FMM H T STSPSY P I V AS IET A A AM L r GNS GK R L IQRS IE R AL DF R K E VQR 453
Cdd:cd00615 221 T L P AL T Q G S M IH V KG DL v NPDRV NEA LNL H Q STSPSY L I L AS LDV A R AM M - ALE GK E L VEEL IE L AL YA R Q E INK 294
Name
Accession
Description
Interval
E-value
PRK15399
PRK15399 lysine decarboxylase;
14-725
0e+00
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain]
Cd Length: 713
Bit Score: 1605.94
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 14 NIIAIMGPHGV YH KDEPIKELE A ALQ R QGFQTIWPQNS A DLL Q FIEHNPRICGVIFDWDEYS V DLCSDINQLNEYLPLYA 93
Cdd:PRK15399 2 NIIAIMGPHGV FY KDEPIKELE S ALQ A QGFQTIWPQNS V DLL K FIEHNPRICGVIFDWDEYS L DLCSDINQLNEYLPLYA 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 94 FIN A HSTMDVS S QD L RM T LWFFEYALG LS E E IA T RI G QYT R EYL E NITPPFT R ALF N YV Q EGKYTFCTPGHMGG S AYQKS 173
Cdd:PRK15399 82 FIN T HSTMDVS V QD M RM A LWFFEYALG AA E D IA I RI R QYT N EYL D NITPPFT K ALF T YV K EGKYTFCTPGHMGG T AYQKS 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 174 PVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR A FGAEQSY M VTNGTSTSNKIVGMY S APAGSTLLID 253
Cdd:PRK15399 162 PVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIAR T FGAEQSY I VTNGTSTSNKIVGMY A APAGSTLLID 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 254 RNCHKSLAHLLMMSDVVP L WLKPTRNALGILGGIPRREFTRDSI QQ KV RD T GG AQWPVHAVITNSTYDGLLYNT T W L K E T 333
Cdd:PRK15399 242 RNCHKSLAHLLMMSDVVP I WLKPTRNALGILGGIPRREFTRDSI EE KV AA T TQ AQWPVHAVITNSTYDGLLYNT D W I K Q T 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 334 LDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER I PGKVIFETQSTHKMLAA L SQASLIHIKG N YDEETFNEAFMMHTSTSP 413
Cdd:PRK15399 322 LDVPSIHFDSAWVPYTHFHPIYQGKSGMSGER V PGKVIFETQSTHKMLAA F SQASLIHIKG E YDEETFNEAFMMHTSTSP 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 414 SYPIVAS I ETAAAMLRGN S GKRLI Q RS I ERAL D FRKEVQRLREESDGWFFDIWQPE A VD K AECWPVAPGE D WHGFKDADA 493
Cdd:PRK15399 402 SYPIVAS V ETAAAMLRGN P GKRLI N RS V ERAL H FRKEVQRLREESDGWFFDIWQPE N VD E AECWPVAPGE Q WHGFKDADA 481
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 494 DHM Y LDPVKVTILTPGMDEQGNM D EEGIPAALVAKFLDERG V VVEKTGPYNLLFLFSIGIDKT R AMGLLRGLTEFKRAYD 573
Cdd:PRK15399 482 DHM F LDPVKVTILTPGMDEQGNM S EEGIPAALVAKFLDERG I VVEKTGPYNLLFLFSIGIDKT K AMGLLRGLTEFKRAYD 561
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 574 LNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH R LIR Q H Q LP Q LML S AFDVLPEM K MTPH H AWQRQIKGEVET IE LE N LV 653
Cdd:PRK15399 562 LNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIH K LIR K H D LP G LML R AFDVLPEM I MTPH Q AWQRQIKGEVET VA LE Q LV 641
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 636340345 654 GR I SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG R HYPGFETDIHGAKRDEDGVYRVRVLK NDE 725
Cdd:PRK15399 642 GR V SANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIG Q HYPGFETDIHGAKRDEDGVYRVRVLK MAG 713
PRK15400
PRK15400 lysine decarboxylase;
13-726
0e+00
lysine decarboxylase;
Pssm-ID: 185298 [Multi-domain]
Cd Length: 714
Bit Score: 1287.88
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 13 V N I IAI MGPH GVY H K D EPI K EL EA AL Q R QG FQ TIW P QNSA DLL QF IE H N P R I CGVIFDWD E Y SVD LC SD I NQL NE Y LPLY 92
Cdd:PRK15400 1 M N V IAI LNHM GVY F K E EPI R EL HR AL E R LN FQ IVY P NDRD DLL KL IE N N A R L CGVIFDWD K Y NLE LC EE I SKM NE N LPLY 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 93 AF I N AH ST M DVS SQ DLR MTLW FFEYALG LSEE IA TR I G Q Y T R EY LEN I T PP F T R ALF N YV Q EGKYTFCTPGHMGG S A Y QK 172
Cdd:PRK15400 81 AF A N TY ST L DVS LN DLR LQVS FFEYALG AADD IA NK I K Q T T D EY IDT I L PP L T K ALF K YV R EGKYTFCTPGHMGG T A F QK 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 173 SPVG C LFYDFFG G NT L K A D V SISV T ELGSLLDH T GPH L EAEEYIAR A F G A EQ SYMVTNGTST S NKIVGMYSAPAGST L LI 252
Cdd:PRK15400 161 SPVG S LFYDFFG P NT M K S D I SISV S ELGSLLDH S GPH K EAEEYIAR V F N A DR SYMVTNGTST A NKIVGMYSAPAGST V LI 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 253 DRNCHKSL A HL L MMSDV V P LWLK PTRNA L GILGGIP RR EF TRDS I QQK V RD T GG A Q WPVHAVITNSTYDGLLYNT TWL K E 332
Cdd:PRK15400 241 DRNCHKSL T HL M MMSDV T P IYFR PTRNA Y GILGGIP QS EF QHAT I AKR V KE T PN A T WPVHAVITNSTYDGLLYNT DFI K K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 333 TLDV P SIHFDSAWVPYT H F H PIY Q GK S GMSG E R IP GKVI F ETQSTHK M LAA L SQAS L IH I KG NYD EETFNEA F MMHT S TS 412
Cdd:PRK15400 321 TLDV K SIHFDSAWVPYT N F S PIY E GK C GMSG G R VE GKVI Y ETQSTHK L LAA F SQAS M IH V KG DVN EETFNEA Y MMHT T TS 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 413 P S Y P IVAS I ETAAAM LR GN S GKRLI QR SIERA LD FRKE VQ RLR E ESDGWFFD I WQP EAV D KA ECWP VAPGED WHGFK DA D 492
Cdd:PRK15400 401 P H Y G IVAS T ETAAAM MK GN A GKRLI NG SIERA IK FRKE IK RLR T ESDGWFFD V WQP DHI D TT ECWP LRSDST WHGFK NI D 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 493 AD HMYLDP V KVT I LTPGM DEQ G N M DEE GIPA AL VAK F LDE R G V VVEKTGPYNLLFLFSIGIDKT R A MG LLR G LT E FKRA Y 572
Cdd:PRK15400 481 NE HMYLDP I KVT L LTPGM KKD G T M SDF GIPA SI VAK Y LDE H G I VVEKTGPYNLLFLFSIGIDKT K A LS LLR A LT D FKRA F 560
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 573 DLNLRVKNMLP D LY A EDP D FY R NMRIQ D LAQ G IH R LI RQ H Q LP Q LM LS AF D VLP E M K MTP HH A W Q RQIK G EV E TIE L ENL 652
Cdd:PRK15400 561 DLNLRVKNMLP S LY R EDP E FY E NMRIQ E LAQ N IH K LI VH H N LP D LM YR AF E VLP T M V MTP YA A F Q KELH G MT E EVY L DEM 640
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 636340345 653 VGR IS ANMILPYPPGVPL L MPGEMITEESR A VL D FL L MLC S IG R HYPGFETDIHGA K R DE DG V Y R V R VLK NDER 726
Cdd:PRK15400 641 VGR VN ANMILPYPPGVPL V MPGEMITEESR P VL E FL Q MLC E IG A HYPGFETDIHGA Y R QA DG R Y T V K VLK EESK 714
OKR_DC_1
pfam01276 Orn/Lys/Arg decarboxylase, major domain;
142-557
0e+00
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain]
Cd Length: 417
Bit Score: 685.00
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 142 PP FTR ALF N YV QE G K YTF CT PGH M GG SAY QK S P V G CL FYDFFG G N T L KA DV S I SVT ELG S LLDH T G PHL EA EE Y I AR A FG 221
Cdd:pfam01276 1 PP LYK ALF K YV RR G N YTF HC PGH Q GG AGF QK H P A G RF FYDFFG E N L L RI DV C I EDV ELG D LLDH E G AIK EA QK Y A AR V FG 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 222 A EQ SY M V T NGTS T SNK I VGM YSAPA G S T L LIDRNCHKS LA H L LM M S DVV P LW L K P T RNA L GI L GGIP RR EF TRDSIQQKV 301
Cdd:pfam01276 81 A DK SY F V V NGTS G SNK T VGM AVCTP G D T I LIDRNCHKS IH H A LM L S GAT P VY L E P S RNA Y GI I GGIP LH EF QEETLKEAI 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 302 RDTGG A QW P VH AVITN S TYDG L LYN TTWLKE TL DVP S -- I H FDSAWV P Y TH F H PIY QGK S G M S GE RIP G KV IF E TQS T HK 379
Cdd:pfam01276 161 AEVPD A KG P RL AVITN P TYDG V LYN AKEIVD TL HHL S dp I L FDSAWV G Y EQ F I PIY ADA S P M G GE NEN G PG IF V TQS V HK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 380 M LAALSQAS L IH I K GN -- YDEET FNEAFMMH TS TSPSYPI V AS IET AA A ML R GNSG K RL IQRSI ERA LD FRK EVQ rlr EE 457
Cdd:pfam01276 241 L LAALSQAS Y IH K K EG hi VNHDR FNEAFMMH AT TSPSYPI F AS LDV AA K ML E GNSG R RL WNECV ERA IE FRK AID --- TL 317
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 458 SDGW FF DI W Q PE A VD KA ECWP VA PGE D WHGF KDADADHMY LDP V K V TILTPGMDE Q G NMD E E G I PA AL VAK F L D E R G V V V 537
Cdd:pfam01276 318 NNCE FF RP W N PE I VD GK ECWP FH PGE T WHGF EGYADNQYF LDP C K L TILTPGMDE D G EYS E F G V PA TI VAK W L R E N G I V P 397
410 420
....*....|....*....|
gi 636340345 538 EKT GPY N L LFLF SI G I D K T R 557
Cdd:pfam01276 398 EKT DLN N I LFLF TP G E D R T K 417
PRK15029
PRK15029 arginine decarboxylase; Provisional
31-722
0e+00
arginine decarboxylase; Provisional
Pssm-ID: 184989 [Multi-domain]
Cd Length: 755
Bit Score: 567.55
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 31 IKE L EA AL QR Q GFQT I WPQNSA D LLQFIEH N PR I CGVI F DWDEYSV D LCSDIN QL ------- NEYL P L ya F INAHSTMDV 103
Cdd:PRK15029 21 VER L AD AL SQ Q NVTV I KSTSFD D GFAILSS N EA I DCLM F SYQMEHP D EHQNVR QL igklher QQNV P V -- F LLGDREKAL 98
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 104 SSQ D LRMTLWFF E Y A LG L SEE --- IA T R IGQYTRE Y LENIT PP FTR AL FN Y VQEGK Y TFCT PGH M GG SAYQ K S P V G CLFY 180
Cdd:PRK15029 99 AAM D RDLLELVD E F A WI L EDT adf IA G R AVAAMTR Y RQQLL PP LFS AL MK Y SDIHE Y SWAA PGH Q GG VGFT K T P A G RFYH 178
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 181 D FF G G N TLKA D VS I SV T E LGSLLDHTG PHL E A E E Y I AR A FGA EQ S YM V TN GTS T SN KIVGMYSAPAGSTLLI DRNCHKS L 260
Cdd:PRK15029 179 D YY G E N LFRT D MG I ER T S LGSLLDHTG AFG E S E K Y A AR V FGA DR S WS V VV GTS G SN RTIMQACMTDNDVVVV DRNCHKS I 258
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 261 AHL L MMSDVV P LWLK P T RN AL GI L G G I PRR E FTRDSI Q Q K VRD ----- TGGA Q W P VHA V I TN S TYDG LL YN TTWLKET L D 335
Cdd:PRK15029 259 EQG L ILTGAK P VYMV P S RN RY GI I G P I YPQ E MQPETL Q K K ISE spltk DKAG Q K P SYC V V TN C TYDG VC YN AKEAQDL L E 338
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 336 -- VPSI HFD S AW VP Y TH F H PIY QGKSG M S GE RI -- P G KVI F E T Q STHK M L A ALSQAS L IH I --- K G NYDEET FN E A F MMH 408
Cdd:PRK15029 339 kt SDRL HFD E AW YG Y AR F N PIY ADHYA M R GE PG dh N G PTV F A T H STHK L L N ALSQAS Y IH V reg R G AINFSR FN Q A Y MMH 418
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 409 TS TSP S Y P I V AS IET A AA M LR GNSG KR L I Q RS I ER A L DFR KEVQ RL R --- EESDG WFF DI W QP E A V DKAE ---------- 475
Cdd:PRK15029 419 AT TSP L Y A I C AS NDV A VS M MD GNSG LS L T Q EV I DE A V DFR QAMA RL Y kef TADGS WFF KP W NK E V V TDPQ tgktydfada 498
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 476 ---------- CW PVA PGE D WHGFKD ADADHMY LDP V KV T IL T PGM D E Q G NMD E E G I PAALV AKF L DER G V V VEK T GPYNL 545
Cdd:PRK15029 499 ptkllttvqd CW VMH PGE S WHGFKD LPDNWSM LDP I KV S IL A PGM G E D G ELE E T G V PAALV TAW L GRH G I V PTR T TDFQI 578
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 546 L FLFS I G IDKTRAMG L LRG L TE FKR A YD L N LRVKNML P D L YAED PD F Y R NM R I Q DL AQGIHRLIRQHQLPQLMLS A FDV L 625
Cdd:PRK15029 579 M FLFS M G VTRGKWGT L VNT L CS FKR H YD A N TPLAQVM P E L VEQY PD T Y A NM G I H DL GDTMFAWLKENNPGARLNE A YSG L 658
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 626 P EMKM TP HH A WQRQIKGE VE TIEL ENL V GRI S AN MIL PYPPG V P L L MP GE MITEESRAVLDF L LM L C S IGR H Y PGFE TDI 705
Cdd:PRK15029 659 P VAEI TP RE A YNAIVDNN VE LVSI ENL P GRI A AN SVI PYPPG I P M L LS GE NFGDKNSPQVSY L RS L Q S WDH H F PGFE HET 738
730
....*....|....*..
gi 636340345 706 H G AKR d E DG V Y R V RVL K 722
Cdd:PRK15029 739 E G TEI - I DG I Y H V MCV K 754
LdcC
COG1982 Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
136-723
0e+00
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain]
Cd Length: 486
Bit Score: 559.34
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 136 Y LENITP P FTR AL FN Y VQE G KYT F CT PGH M GG SAY qkspv G CL FYDFFG G N TLKA D VSI s VTE L GS L L D HT G PHL EA E E Y 215
Cdd:COG1982 1 Y MDQLLT P LFD AL KK Y AER G PVS F HV PGH K GG RGF ----- G RE FYDFFG E N VFRL D LTE - LPG L DD L H D PE G VIK EA Q E L 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 216 I A R AFGA EQSYMVT NGTS TS NK IVGMYSAPA G STL L ID RNCHKS LA H L L MM S DVV P LW L K P T - R N A LGI L GGI PRREFTR 294
Cdd:COG1982 75 A A E AFGA DRTFFLV NGTS SG NK AMILAVCGP G DKV L VP RNCHKS VI H G L IL S GAI P VY L N P E i D N E LGI I GGI TPEAVEE 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 295 DS I QQK vrdtggaq WPVHAV ITN S TY D G LL Y NTTWLK E TLD -- VPSIHF D S A WVPYTH FHP IYQ g K S G M S gerip GKVIF 372
Cdd:COG1982 155 AL I EHP -------- DAKAVL ITN P TY Y G VC Y DLKAIA E LAH eh GIPVLV D E A HGAHFG FHP DLP - R S A M E ----- AGADL 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 373 ET QSTHK M L A AL S Q A S LI H I KG NY - D E E TF NEA F M MHT STSPSY PIV AS IET A AAMLR G N s G KR L IQRSI E R A LDF RKE V 451
Cdd:COG1982 221 VV QSTHK T L G AL T Q S S ML H V KG GR v D H E RV NEA L M LLQ STSPSY LLM AS LDV A RRQMA G E - G EE L LDEAL E L A IEA RKE I 299
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 452 QRL reesdg WFFDIWQ PE AVD kaecwpvapgedwhgfkda DADHMY LDP V K V TI LT PG M deqgnmdee GI PAAL VA KF L D 531
Cdd:COG1982 300 NKI ------ PGLYVFG PE DLG ------------------- APGVYD LDP T K L TI DV PG L --------- GI SGYE VA EY L R 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 532 E R - G VV VE KTGP YN L LFL F S I G ID K TRAMG L LRG L T E F KR A YD L N LRVKNM LP D lyaedpdfyrnmriqdlaqgihrlir 610
Cdd:COG1982 346 E E y G IQ VE LADL YN I LFL L S L G DT K EDIER L VAA L K E L KR L YD K N APLEEV LP L -------------------------- 399
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 611 qhqlpqlmls AF DV LPE MK M T P HH A WQ rqik G E V E TIE LE NL VGRI S A N M IL PYPPG V PLLMPGE M ITEE sra V L D F L LM 690
Cdd:COG1982 400 ---------- AF PP LPE LV M S P RE A FF ---- A E T E LVP LE EA VGRI A A E M VI PYPPG I PLLMPGE R ITEE --- V I D Y L RA 462
570 580 590
....*....|....*....|....*....|...
gi 636340345 691 L CSI G RHY PGFE tdihgakrd EDGVYRV RV L K N 723
Cdd:COG1982 463 L EEA G GRF PGFE --------- DPELRTI RV V K E 486
Orn_deC_like
cd00615 Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ...
143-453
1.19e-132
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain]
Cd Length: 294
Bit Score: 393.92
E-value: 1.19e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 143 P FTR AL FN Y VQE G KYT F CT PGH M GG SAYQ KS pvgcl FY D F F G G N TL KADV SI s V T E L GS LLD H TGP HL EA E E YI ARAFGA 222
Cdd:cd00615 1 P LFE AL KE Y AKR G IIS F HV PGH K GG RGFR KS ----- FY E F Y G E N LF KADV TE - L T G L DD LLD P TGP IK EA Q E LA ARAFGA 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 223 EQSYMVT NGTS T SNK I V GMYSAPA G STL LIDRNCHKS LAHL L MM S DV VP LW LKP T RN A - L GI L GGIP RRE F TRDS I Q qkv 301
Cdd:cd00615 75 KHTFFLV NGTS S SNK A V ILAVCGP G DKI LIDRNCHKS VING L VL S GA VP VY LKP E RN P y Y GI A GGIP PET F KKAL I E --- 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 302 rdtgg AQWPVH AVITN S TY D G LL YN TTWLK E TLD -- VPSIHF D S A WVPYTH FHPI YQGKSG M S G eripgk VIFET QSTHK 379
Cdd:cd00615 152 ----- HPDAKA AVITN P TY Y G IC YN LRKIV E EAH hr GLPVLV D E A HGAHFR FHPI LPSSAA M A G ------ ADIVV QSTHK 220
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 636340345 380 M L A AL S Q A S L IH I KG NY - DEETF NEA FMM H T STSPSY P I V AS IET A A AM L r GNS GK R L IQRS IE R AL DF R K E VQR 453
Cdd:cd00615 221 T L P AL T Q G S M IH V KG DL v NPDRV NEA LNL H Q STSPSY L I L AS LDV A R AM M - ALE GK E L VEEL IE L AL YA R Q E INK 294
PRK13578
PRK13578 ornithine decarboxylase; Provisional
120-723
1.24e-120
ornithine decarboxylase; Provisional
Pssm-ID: 237434 [Multi-domain]
Cd Length: 720
Bit Score: 377.77
E-value: 1.24e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 120 G LS E EIATRIGQ Y T R E ------- Y L EN IT PPF TRA L FN YV QE G KY TF CT PGH M GG SAYQ K S P V G CL FYDFFG G N TLK AD V 192
Cdd:PRK13578 80 G VF E LCESNNEF Y G R Q letaask Y E EN LL PPF FDT L TD YV EM G NS TF DC PGH Q GG QFFR K H P A G RQ FYDFFG E N LFR AD M 159
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 193 SISVTE LG S LL D H T G PHLE A EEYI A RA F G A EQS Y M V T NGTS T SNK I V GMYSAPA G STL L I DRN C HKS LA H - L L MMSDVV P 271
Cdd:PRK13578 160 CNADVK LG D LL I H E G AAKD A QKHA A KV F N A DKT Y F V L NGTS A SNK V V TNALLTP G DLV L F DRN N HKS NH H g A L IQAGAT P 239
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 272 LW L KPT RN AL G IL GGI PRRE F TRDSIQQKV R DT -- GG A QWPVH --- AVI TNS TYDG LL YN TTWLKETL ---- D V ps I H FD 342
Cdd:PRK13578 240 VY L ETA RN PF G FI GGI DAHC F DEEYLREQI R EV ap ER A DEARP frl AVI QLG TYDG TI YN ARQVVDKI ghlc D Y -- I L FD 317
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 343 SAWV P Y TH F H P IYQGK S GMS --- G E RI PG kv IF E TQS T HK ML A AL SQ A S L IH I K G N Y -------- DEETF N E AFM M H T ST 411
Cdd:PRK13578 318 SAWV G Y EQ F I P MMADC S PLL lel N E ND PG -- IF V TQS V HK QQ A GF SQ T S Q IH K K D N H ikgqaryc PHKRL N N AFM L H A ST 395
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 412 SP S YP IV A SIETA A A M LR G N SG K RL IQRSIERALDF RK EV ---- QRL R ---- EES DG wff DI WQ ---- PEAVDKAECWPV 479
Cdd:PRK13578 396 SP F YP LF A ALDVN A K M HE G E SG R RL WMECVKLGIEA RK LI larc KLI R pfip PVV DG --- KP WQ dypt EQIASDLRFFSF 472
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 480 A PGE D WHGF KDADA D HMYL DP V K VTIL TPG M D - E Q G NMDEE GIPA ALV A KF L D E R G V V V EK TGPYNL LFL FSIGI D KTRA 558
Cdd:PRK13578 473 E PGE K WHGF EGYAE D QYFV DP C K LLLT TPG I D a E T G EYEDF GIPA TIL A NY L R E N G I V P EK CDLNSI LFL LTPAE D MAKL 552
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 559 MG L LRG L TE F KRAYDLNLRVKNM LP DL Y AED P DF YR NMRIQD L A Q GI H R L IRQ H QLP QL MLSA F -- DVL P EMK M T P HH A W 636
Cdd:PRK13578 553 QQ L VAM L AR F EKHIEDDAPLAEV LP SV Y KKN P ER YR GYTLRQ L C Q EM H D L YVS H DVK QL QKEM F rk ASF P RVV M N P QD A N 632
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 637 QRQ I K GEVE TIE L ENLV GRI S A NMI LPYPPGV PLLM PGE MITE esr AV LDFL L M L CSIGRHY PGF ETDIH G -- AKR D E DG 714
Cdd:PRK13578 633 IAY I R GEVE LVR L SEAE GRI A A EGA LPYPPGV LCVV PGE IWGG --- AV QRYF L A L EEGINLL PGF APELQ G vy LET D A DG 709
650
....*....|.
gi 636340345 715 VY R VR -- VLK N 723
Cdd:PRK13578 710 RK R AY gy VLK P 720
OKR_DC_1_C
pfam03711 Orn/Lys/Arg decarboxylase, C-terminal domain;
582-713
6.25e-67
Orn/Lys/Arg decarboxylase, C-terminal domain;
Pssm-ID: 461020 [Multi-domain]
Cd Length: 132
Bit Score: 216.62
E-value: 6.25e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 582 LP D L Y A ED P DF Y RN M RIQ DL A Q GI H RLI R QHQLPQ L MLS AF DV LPE MK MTP HH A W Q RQIK GEVE TIE L EN L V GRI S A NMI 661
Cdd:pfam03711 1 LP E L V A AY P ER Y EG M GLR DL C Q EM H DFY R ENNVAR L QKE AF RS LPE PA MTP AE A Y Q ELVR GEVE LVP L DE L E GRI A A VGV 80
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 636340345 662 LPYPPG V PLLMPGE MIT EE S R AV LD F LL M L CSIGRHY PGFET D IHG AK R D ED 713
Cdd:pfam03711 81 LPYPPG I PLLMPGE RFG EE N R PI LD Y LL A L EEFDNRF PGFET E IHG VY R E ED 132
OKR_DC_1_N
pfam03709 Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is ...
27-136
4.00e-34
Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure.
Pssm-ID: 427454 [Multi-domain]
Cd Length: 111
Bit Score: 125.81
E-value: 4.00e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 636340345 27 K DEPIK EL EA AL Q R Q G FQTIWPQNSA DLL QF IE HNPR I CG V IFD WD E Y SVD L CSD I NQL N EY LP LYAFINA H STM DV SSQ 106
Cdd:pfam03709 2 K IAASR EL AE AL E R T G REVVDATSTD DLL AA IE TFTD I AA V VLS WD D Y AAG L LDE I RRR N FD LP VFLLGET H TSE DV PAD 81
90 100 110
....*....|....*....|....*....|
gi 636340345 107 D LR MTLW F F E Y A LGLS E E IA TR I GQYTRE Y 136
Cdd:pfam03709 82 V LR LIDG F I E L A EDTP E F IA RQ I EAAAKK Y 111
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
