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Conserved domains on  [gi|2366409744|gb|KAJ0513394|]
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putative transcription factor HSF-type-DNA-binding family [Helianthus annuus]

Protein Classification

heat shock factor family protein( domain architecture ID 10648050)

heat shock factor (HSF) family protein may act as a transcriptional factor

CATH:  1.10.10.10
Gene Ontology:  GO:0043565|GO:0003700
PubMed:  22044151|20945528|22033015|8689565|11344080
SCOP:  4000226

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
HSF smart00415
heat shock factor;
11-73 1.02e-30

heat shock factor;


:

Pssm-ID: 214654  Cd Length: 105  Bit Score: 104.29  E-value: 1.02e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2366409744   11 SPSPFLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:smart00415   1 QPPPFLTKLYLLVEDPSTDKIISWSPSGKSFVIWDPEEFAKNLLPRYFKHNNFSSFVRQLNMY 63
 
Name Accession Description Interval E-value
HSF smart00415
heat shock factor;
11-73 1.02e-30

heat shock factor;


Pssm-ID: 214654  Cd Length: 105  Bit Score: 104.29  E-value: 1.02e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2366409744   11 SPSPFLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:smart00415   1 QPPPFLTKLYLLVEDPSTDKIISWSPSGKSFVIWDPEEFAKNLLPRYFKHNNFSSFVRQLNMY 63
HSF_DNA-bind pfam00447
HSF-type DNA-binding;
15-73 2.35e-29

HSF-type DNA-binding;


Pssm-ID: 459813  Cd Length: 98  Bit Score: 100.73  E-value: 2.35e-29
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 2366409744 15 FLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:pfam00447  1 FLRKLYRMLEDPETDDIISWSDDGDSFVILDPEEFAKEVLPKYFKHSNFSSFVRQLNMY 59
HSF1 COG5169
Heat shock transcription factor [Transcription];
9-73 6.27e-19

Heat shock transcription factor [Transcription];


Pssm-ID: 227497 [Multi-domain]  Cd Length: 282  Bit Score: 78.24  E-value: 6.27e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2366409744   9 KSSPSPFLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:COG5169     7 WSQPKEFVHKLYQILEEPEYYKLIQWSPDGRSFVILDPEEFTKVILPRYFKHGNFASFVRQLNKY 71
 
Name Accession Description Interval E-value
HSF smart00415
heat shock factor;
11-73 1.02e-30

heat shock factor;


Pssm-ID: 214654  Cd Length: 105  Bit Score: 104.29  E-value: 1.02e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2366409744   11 SPSPFLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:smart00415   1 QPPPFLTKLYLLVEDPSTDKIISWSPSGKSFVIWDPEEFAKNLLPRYFKHNNFSSFVRQLNMY 63
HSF_DNA-bind pfam00447
HSF-type DNA-binding;
15-73 2.35e-29

HSF-type DNA-binding;


Pssm-ID: 459813  Cd Length: 98  Bit Score: 100.73  E-value: 2.35e-29
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 2366409744 15 FLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:pfam00447  1 FLRKLYRMLEDPETDDIISWSDDGDSFVILDPEEFAKEVLPKYFKHSNFSSFVRQLNMY 59
HSF1 COG5169
Heat shock transcription factor [Transcription];
9-73 6.27e-19

Heat shock transcription factor [Transcription];


Pssm-ID: 227497 [Multi-domain]  Cd Length: 282  Bit Score: 78.24  E-value: 6.27e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2366409744   9 KSSPSPFLLKTYMLVDDPATDHVVSWNAAGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTY 73
Cdd:COG5169     7 WSQPKEFVHKLYQILEEPEYYKLIQWSPDGRSFVILDPEEFTKVILPRYFKHGNFASFVRQLNKY 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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