NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1917973484|gb|KAF8036942|]
View 

hypothetical protein BT93_C2618 [Corymbia citriodora subsp. variegata]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
soxA_mon super family cl31099
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 8-395 1.92e-161

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


The actual alignment was detected with superfamily member TIGR01377:

Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 458.91  E-value: 1.92e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSHGESRTIRATYPEDYYTDMVLESSKLWREAEAEAGYRVY 87
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPHSRGSSHGQSRIIRKAYPEDFYTPMMLECYQLWAQLEKEAGTKLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  88 TSTPHLDMGPANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSgRLSIPKDWIAVYTEFGGIIKPTKAVSMFQALAFQRG 167
Cdd:TIGR01377  81 RQTGLLLLGPKENQFLKTIQATLSRHGLEHELLSSKQLKQRFP-NIRVPRNEVGLLDPNGGVLYAEKALRALQELAEAHG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 168 AVLKDNMEVKDIKTDEvrgGIVVYTAMGDKFWGRKCVVTAGAWTKKLVYSItGHELPIQPLETAVWYWRIKEGHKEKYAI 247
Cdd:TIGR01377 160 ATVRDGTKVVEIEPTE---LLVTVKTTKGSYQANKLVVTAGAWTSKLLSPL-GIEIPLQPLRINVCYWREKEPGSYGVSQ 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 248 ggDFLTFASYGQ-PCIYGTPSLEFPGLIKIAVHGGCLCDPDKRPWLPGR---DLDSLKEWIEGRFLGLLdcSTPASTQSC 323
Cdd:TIGR01377 236 --AFPCFLVLGLnPHIYGLPSFEYPGLMKVYYHHGQQIDPDERDCPFGAdieDVQILRKFVRDHLPGLN--GEPKKGEVC 311

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1917973484 324 MYSMTPDENFVLDFLGRefKEDVVIGGGFSGHGFMMSPVIGRILADLALTGSAdGVELKHFRIGRFDENPKG 395
Cdd:TIGR01377 312 MYTNTPDEHFVIDLHPK--YDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKP-SYDLAIFSLNRFALKKKA 380
 
Name Accession Description Interval E-value
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 8-395 1.92e-161

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 458.91  E-value: 1.92e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSHGESRTIRATYPEDYYTDMVLESSKLWREAEAEAGYRVY 87
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPHSRGSSHGQSRIIRKAYPEDFYTPMMLECYQLWAQLEKEAGTKLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  88 TSTPHLDMGPANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSgRLSIPKDWIAVYTEFGGIIKPTKAVSMFQALAFQRG 167
Cdd:TIGR01377  81 RQTGLLLLGPKENQFLKTIQATLSRHGLEHELLSSKQLKQRFP-NIRVPRNEVGLLDPNGGVLYAEKALRALQELAEAHG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 168 AVLKDNMEVKDIKTDEvrgGIVVYTAMGDKFWGRKCVVTAGAWTKKLVYSItGHELPIQPLETAVWYWRIKEGHKEKYAI 247
Cdd:TIGR01377 160 ATVRDGTKVVEIEPTE---LLVTVKTTKGSYQANKLVVTAGAWTSKLLSPL-GIEIPLQPLRINVCYWREKEPGSYGVSQ 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 248 ggDFLTFASYGQ-PCIYGTPSLEFPGLIKIAVHGGCLCDPDKRPWLPGR---DLDSLKEWIEGRFLGLLdcSTPASTQSC 323
Cdd:TIGR01377 236 --AFPCFLVLGLnPHIYGLPSFEYPGLMKVYYHHGQQIDPDERDCPFGAdieDVQILRKFVRDHLPGLN--GEPKKGEVC 311

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1917973484 324 MYSMTPDENFVLDFLGRefKEDVVIGGGFSGHGFMMSPVIGRILADLALTGSAdGVELKHFRIGRFDENPKG 395
Cdd:TIGR01377 312 MYTNTPDEHFVIDLHPK--YDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKP-SYDLAIFSLNRFALKKKA 380
solA PRK11259
N-methyl-L-tryptophan oxidase;
8-389 3.47e-78

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 246.29  E-value: 3.47e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSHGESRTIRATYPED-YYTDMVLESSKLWREAEAEAGYRV 86
Cdd:PRK11259    4 YDVIVIGLGSMGSAAGYYLARRGLRVLGLDRFMPPHQQGSSHGDTRIIRHAYGEGpAYVPLVLRAQELWRELERESGEPL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  87 YTSTPHLDMGPANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSGrLSIPKDWIAVYTEFGGIIKPTKAVSMFQALAFQR 166
Cdd:PRK11259   84 FVRTGVLNLGPADSDFLANSIRSARQHGLPHEVLDAAEIRRRFPQ-FRLPDGYIALFEPDGGFLRPELAIKAHLRLAREA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 167 GAVLKDNMEVKDIktDEVRGGIVVYTAMGdKFWGRKCVVTAGAWTKKLVYSItghELPIQPlETAVWYWRIKEGhkeKYA 246
Cdd:PRK11259  163 GAELLFNEPVTAI--EADGDGVTVTTADG-TYEAKKLVVSAGAWVKDLLPPL---ELPLTP-VRQVLAWFQADG---RYS 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 247 IGGDF----LTFASYGQpcIYGTPSLEFPGLiKIA--VHGGCLCDPD--KRPWLPGRDLDSLKEWIEGRFLGLLDCstpA 318
Cdd:PRK11259  233 EPNRFpafiWEVPDGDQ--YYGFPAENGPGL-KIGkhNGGQEITSPDerDRFVTVAEDGAELRPFLRNYLPGVGPC---L 306

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1917973484 319 STQSCMYSMTPDENFVLDFLGREfkEDVVIGGGFSGHGFMMSPVIGRILADLALTGSADgVELKHFRIGRF 389
Cdd:PRK11259  307 RGAACTYTNTPDEHFIIDTLPGH--PNVLVASGCSGHGFKFASVLGEILADLAQDGTSD-FDLSPFSLSRF 374
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
7-388 1.05e-48

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 169.32  E-value: 1.05e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   7 EFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHhlGSSHGESRTIRATYPEDY---YTDMVLESSKLWREAEAEAG 83
Cdd:COG0665     2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGS--GASGRNAGQLRPGLAALAdraLVRLAREALDLWRELAAELG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  84 YRV-YTSTPHLDMG--PANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSGrLSIPKDWIAVYTEFGGIIKPTKAVSMFQ 160
Cdd:COG0665    80 IDCdFRRTGVLYLArtEAELAALRAEAEALRALGLPVELLDAAELREREPG-LGSPDYAGGLYDPDDGHVDPAKLVRALA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 161 ALAFQRGAVLKDNMEVKDIKTDEvrGGIVVYTAMGDKFWGRKCVVTAGAWTKKLVYSItGHELPIQPLETAVWYwrikeg 240
Cdd:COG0665   159 RAARAAGVRIREGTPVTGLEREG--GRVTGVRTERGTVRADAVVLAAGAWSARLLPML-GLRLPLRPVRGYVLV------ 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 241 hkekYAIGGDFLTFASYGQPCIYGTPSLEfpGLIKIAVHGGcLCDPDKRPwlPGRDLDSLKEWIEGRFLGLLDCStPAST 320
Cdd:COG0665   230 ----TEPLPDLPLRPVLDDTGVYLRPTAD--GRLLVGGTAE-PAGFDRAP--TPERLEALLRRLRRLFPALADAE-IVRA 299

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1917973484 321 QSCMYSMTPDENFVLDFLGREfkEDVVIGGGFSGHGFMMSPVIGRILADLaLTGSADGVELKHFRIGR 388
Cdd:COG0665   300 WAGLRPMTPDGLPIIGRLPGA--PGLYVATGHGGHGVTLAPAAGRLLADL-ILGGEPPLDLAPFSPDR 364
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-370 2.59e-39

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 143.69  E-value: 2.59e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHlGSSHGESRTIRATY---PEDYYTDMVLESSKLWREAEAEAGYR 85
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS-GASGRNAGLIHPGLrylEPSELARLALEALDLWEELEEELGID 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  86 V-YTSTPHLDMGPANDV-SLQAVIAICLKNSFSVQVLNQRAVADRFSGRLSIPKdwiAVYTEFGGIIKPTKAVSMFQALA 163
Cdd:pfam01266  80 CgFRRCGVLVLARDEEEeALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRG---GLFYPDGGHVDPARLLRALARAA 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 164 FQRGAVLKDNMEVKDIktdEVRGGIVVYTAMGDKfwgRKCVVTAGAWTKKLvySITGHELPIQPLETavWYWRIKEGHKE 243
Cdd:pfam01266 157 EALGVRIIEGTEVTGI---EEEGGVWGVVTTGEA---DAVVNAAGAWADLL--ALPGLRLPVRPVRG--QVLVLEPLPEA 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 244 KYAIGGDFLTFASYGqpcIYGTPSLEfpGLIKIAvhGGCLCDPDKRPWLPGRDLDSLKEWIEGRFLGLLDcstPASTQSC 323
Cdd:pfam01266 227 LLILPVPITVDPGRG---VYLRPRAD--GRLLLG--GTDEEDGFDDPTPDPEEIEELLEAARRLFPALAD---IERAWAG 296

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1917973484 324 MYSMtPDENFVldfLGREFKEDVVIGGGFSGHGFMMSPVIGRILADL 370
Cdd:pfam01266 297 LRPL-PDGLPI---IGRPGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
 
Name Accession Description Interval E-value
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 8-395 1.92e-161

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 458.91  E-value: 1.92e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSHGESRTIRATYPEDYYTDMVLESSKLWREAEAEAGYRVY 87
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEQFDLPHSRGSSHGQSRIIRKAYPEDFYTPMMLECYQLWAQLEKEAGTKLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  88 TSTPHLDMGPANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSgRLSIPKDWIAVYTEFGGIIKPTKAVSMFQALAFQRG 167
Cdd:TIGR01377  81 RQTGLLLLGPKENQFLKTIQATLSRHGLEHELLSSKQLKQRFP-NIRVPRNEVGLLDPNGGVLYAEKALRALQELAEAHG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 168 AVLKDNMEVKDIKTDEvrgGIVVYTAMGDKFWGRKCVVTAGAWTKKLVYSItGHELPIQPLETAVWYWRIKEGHKEKYAI 247
Cdd:TIGR01377 160 ATVRDGTKVVEIEPTE---LLVTVKTTKGSYQANKLVVTAGAWTSKLLSPL-GIEIPLQPLRINVCYWREKEPGSYGVSQ 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 248 ggDFLTFASYGQ-PCIYGTPSLEFPGLIKIAVHGGCLCDPDKRPWLPGR---DLDSLKEWIEGRFLGLLdcSTPASTQSC 323
Cdd:TIGR01377 236 --AFPCFLVLGLnPHIYGLPSFEYPGLMKVYYHHGQQIDPDERDCPFGAdieDVQILRKFVRDHLPGLN--GEPKKGEVC 311

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1917973484 324 MYSMTPDENFVLDFLGRefKEDVVIGGGFSGHGFMMSPVIGRILADLALTGSAdGVELKHFRIGRFDENPKG 395
Cdd:TIGR01377 312 MYTNTPDEHFVIDLHPK--YDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKP-SYDLAIFSLNRFALKKKA 380
solA PRK11259
N-methyl-L-tryptophan oxidase;
8-389 3.47e-78

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 246.29  E-value: 3.47e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSHGESRTIRATYPED-YYTDMVLESSKLWREAEAEAGYRV 86
Cdd:PRK11259    4 YDVIVIGLGSMGSAAGYYLARRGLRVLGLDRFMPPHQQGSSHGDTRIIRHAYGEGpAYVPLVLRAQELWRELERESGEPL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  87 YTSTPHLDMGPANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSGrLSIPKDWIAVYTEFGGIIKPTKAVSMFQALAFQR 166
Cdd:PRK11259   84 FVRTGVLNLGPADSDFLANSIRSARQHGLPHEVLDAAEIRRRFPQ-FRLPDGYIALFEPDGGFLRPELAIKAHLRLAREA 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 167 GAVLKDNMEVKDIktDEVRGGIVVYTAMGdKFWGRKCVVTAGAWTKKLVYSItghELPIQPlETAVWYWRIKEGhkeKYA 246
Cdd:PRK11259  163 GAELLFNEPVTAI--EADGDGVTVTTADG-TYEAKKLVVSAGAWVKDLLPPL---ELPLTP-VRQVLAWFQADG---RYS 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 247 IGGDF----LTFASYGQpcIYGTPSLEFPGLiKIA--VHGGCLCDPD--KRPWLPGRDLDSLKEWIEGRFLGLLDCstpA 318
Cdd:PRK11259  233 EPNRFpafiWEVPDGDQ--YYGFPAENGPGL-KIGkhNGGQEITSPDerDRFVTVAEDGAELRPFLRNYLPGVGPC---L 306

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1917973484 319 STQSCMYSMTPDENFVLDFLGREfkEDVVIGGGFSGHGFMMSPVIGRILADLALTGSADgVELKHFRIGRF 389
Cdd:PRK11259  307 RGAACTYTNTPDEHFIIDTLPGH--PNVLVASGCSGHGFKFASVLGEILADLAQDGTSD-FDLSPFSLSRF 374
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
7-388 1.05e-48

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 169.32  E-value: 1.05e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   7 EFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHhlGSSHGESRTIRATYPEDY---YTDMVLESSKLWREAEAEAG 83
Cdd:COG0665     2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGS--GASGRNAGQLRPGLAALAdraLVRLAREALDLWRELAAELG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  84 YRV-YTSTPHLDMG--PANDVSLQAVIAICLKNSFSVQVLNQRAVADRFSGrLSIPKDWIAVYTEFGGIIKPTKAVSMFQ 160
Cdd:COG0665    80 IDCdFRRTGVLYLArtEAELAALRAEAEALRALGLPVELLDAAELREREPG-LGSPDYAGGLYDPDDGHVDPAKLVRALA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 161 ALAFQRGAVLKDNMEVKDIKTDEvrGGIVVYTAMGDKFWGRKCVVTAGAWTKKLVYSItGHELPIQPLETAVWYwrikeg 240
Cdd:COG0665   159 RAARAAGVRIREGTPVTGLEREG--GRVTGVRTERGTVRADAVVLAAGAWSARLLPML-GLRLPLRPVRGYVLV------ 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 241 hkekYAIGGDFLTFASYGQPCIYGTPSLEfpGLIKIAVHGGcLCDPDKRPwlPGRDLDSLKEWIEGRFLGLLDCStPAST 320
Cdd:COG0665   230 ----TEPLPDLPLRPVLDDTGVYLRPTAD--GRLLVGGTAE-PAGFDRAP--TPERLEALLRRLRRLFPALADAE-IVRA 299

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1917973484 321 QSCMYSMTPDENFVLDFLGREfkEDVVIGGGFSGHGFMMSPVIGRILADLaLTGSADGVELKHFRIGR 388
Cdd:COG0665   300 WAGLRPMTPDGLPIIGRLPGA--PGLYVATGHGGHGVTLAPAAGRLLADL-ILGGEPPLDLAPFSPDR 364
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-370 2.59e-39

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 143.69  E-value: 2.59e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHlGSSHGESRTIRATY---PEDYYTDMVLESSKLWREAEAEAGYR 85
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS-GASGRNAGLIHPGLrylEPSELARLALEALDLWEELEEELGID 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  86 V-YTSTPHLDMGPANDV-SLQAVIAICLKNSFSVQVLNQRAVADRFSGRLSIPKdwiAVYTEFGGIIKPTKAVSMFQALA 163
Cdd:pfam01266  80 CgFRRCGVLVLARDEEEeALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRG---GLFYPDGGHVDPARLLRALARAA 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 164 FQRGAVLKDNMEVKDIktdEVRGGIVVYTAMGDKfwgRKCVVTAGAWTKKLvySITGHELPIQPLETavWYWRIKEGHKE 243
Cdd:pfam01266 157 EALGVRIIEGTEVTGI---EEEGGVWGVVTTGEA---DAVVNAAGAWADLL--ALPGLRLPVRPVRG--QVLVLEPLPEA 226

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 244 KYAIGGDFLTFASYGqpcIYGTPSLEfpGLIKIAvhGGCLCDPDKRPWLPGRDLDSLKEWIEGRFLGLLDcstPASTQSC 323
Cdd:pfam01266 227 LLILPVPITVDPGRG---VYLRPRAD--GRLLLG--GTDEEDGFDDPTPDPEEIEELLEAARRLFPALAD---IERAWAG 296

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1917973484 324 MYSMtPDENFVldfLGREFKEDVVIGGGFSGHGFMMSPVIGRILADL 370
Cdd:pfam01266 297 LRPL-PDGLPI---IGRPGSPGLYLATGHGGHGLTLAPGIGKLLAEL 339
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
4-279 2.44e-10

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 61.70  E-value: 2.44e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   4 STNEFDVIVIGGGIMGSATAYQTAKR-GCRTLLLEQfdlLHHLG--SSHGESRTIRATYpedYYT------DMVLESSKL 74
Cdd:COG0579     1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEK---EDDVAqeSSGNNSGVIHAGL---YYTpgslkaRLCVEGNEL 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484  75 WREAEAEAGYRvYTSTPHLD--MGPANDVSLQAVIAICLKNSFS-VQVLNQRAVADRfsgrlsIP--KDWI--AVYTEFG 147
Cdd:COG0579    75 FYELCRELGIP-FKRCGKLVvaTGEEEVAFLEKLYERGKANGVPgLEILDREELREL------EPllSDEGvaALYSPST 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484 148 GIIKPTKAVSMFQALAFQRGAVLKDNMEVKDIKTDEvrGGIVVYTAmGDKFWGRKCVVTAGawtkklvysitGHELPIqp 227
Cdd:COG0579   148 GIVDPGALTRALAENAEANGVELLLNTEVTGIEREG--DGWEVTTN-GGTIRARFVINAAG-----------LYADRL-- 211

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1917973484 228 LETAvwywrikeGHKEKYAI---GGDFLTFASYGQPC---IYGTPSLEFPGLikiAVH 279
Cdd:COG0579   212 AQMA--------GIGKDFGIfpvKGEYLVLDKPAELVnakVYPVPDPGAPFL---GVH 258
GIDA pfam01134
Glucose inhibited division protein A;
9-36 1.19e-05

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 47.16  E-value: 1.19e-05
                          10        20
                  ....*....|....*....|....*...
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLL 36
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLI 28
PRK13369 PRK13369
glycerol-3-phosphate dehydrogenase; Provisional
 2-93 1.93e-05

glycerol-3-phosphate dehydrogenase; Provisional


Pssm-ID: 237365 [Multi-domain]  Cd Length: 502  Bit Score: 46.50  E-value: 1.93e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   2 GSSTNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSS-----HGESRtiratYPEDYytdmvleSSKLWR 76
Cdd:PRK13369    1 MAEPETYDLFVIGGGINGAGIARDAAGRGLKVLLCEKDDLAQGTSSRsgklvHGGLR-----YLEYY-------EFRLVR 68

                          90
                  ....*....|....*..
gi 1917973484  77 EAEAEAGyRVYTSTPHL 93
Cdd:PRK13369   69 EALIERE-VLLAAAPHI 84
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 9-46 4.35e-05

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 45.29  E-value: 4.35e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDllhHLG 46
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRG---FLG 35
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-45 6.06e-05

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 44.62  E-value: 6.06e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHL 45
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYK 38
glpD PRK12266
glycerol-3-phosphate dehydrogenase; Reviewed
 3-50 7.06e-05

glycerol-3-phosphate dehydrogenase; Reviewed


Pssm-ID: 237027 [Multi-domain]  Cd Length: 508  Bit Score: 44.75  E-value: 7.06e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1917973484   3 SSTNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSS-----HG 50
Cdd:PRK12266    2 TMMETYDLLVIGGGINGAGIARDAAGRGLSVLLCEQDDLASATSSAstkliHG 54
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-56 1.31e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 44.05  E-value: 1.31e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDllhHLGsshGESRTIR 56
Cdd:COG1232     3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASD---RVG---GLIRTVE 44
glpA PRK11101
anaerobic glycerol-3-phosphate dehydrogenase subunit A;
3-41 1.47e-04

anaerobic glycerol-3-phosphate dehydrogenase subunit A;


Pssm-ID: 236847 [Multi-domain]  Cd Length: 546  Bit Score: 43.85  E-value: 1.47e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1917973484   3 SSTNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDL 41
Cdd:PRK11101    2 RDSQETDVIIIGGGATGAGIARDCALRGLRCILVERHDI 40
HI0933_like pfam03486
HI0933-like protein;
8-37 2.59e-04

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 42.95  E-value: 2.59e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1917973484   8 FDVIVIGG---GIMGSATAyqtAKRGCRTLLLE 37
Cdd:pfam03486   1 FDVIVIGGgaaGLMAAISA---AKRGRRVLLIE 30
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
12-63 3.64e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 38.67  E-value: 3.64e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1917973484  12 VIGGGIMGSATAYQTAKRGCRTLLLEQfdlLHHLGsshGESRTIRAT-YPEDY 63
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEK---RDRLG---GNAYSYRVPgYVFDY 47
MnmG COG0445
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal ...
 6-36 4.37e-04

tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440214 [Multi-domain]  Cd Length: 626  Bit Score: 42.30  E-value: 4.37e-04
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1917973484   6 NEFDVIVIGGGIMGSATAYQTAKRGCRTLLL 36
Cdd:COG0445     5 KEYDVIVVGGGHAGCEAALAAARMGAKTLLL 35
PRK11728 PRK11728
L-2-hydroxyglutarate oxidase;
8-37 4.83e-04

L-2-hydroxyglutarate oxidase;


Pssm-ID: 183292 [Multi-domain]  Cd Length: 393  Bit Score: 42.12  E-value: 4.83e-04
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKR--GCRTLLLE 37
Cdd:PRK11728    3 YDFVIIGGGIVGLSTAMQLQERypGARIAVLE 34
PLN02464 PLN02464
glycerol-3-phosphate dehydrogenase
 3-40 5.65e-04

glycerol-3-phosphate dehydrogenase


Pssm-ID: 215257 [Multi-domain]  Cd Length: 627  Bit Score: 42.08  E-value: 5.65e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1917973484   3 SSTNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFD 40
Cdd:PLN02464   67 TAAEPLDVLVVGGGATGAGVALDAATRGLRVGLVERED 104
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-82 6.06e-04

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 41.46  E-value: 6.06e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1917973484   5 TNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSHG-ESRTIRatypedyytdmVLESSKLWREAEAEA 82
Cdd:COG0654     1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIAlSPRSLE-----------LLRRLGLWDRLLARG 68
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 7-38 2.00e-03

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 40.20  E-value: 2.00e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1917973484   7 EFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:COG1053     3 EYDVVVVGSGGAGLRAALEAAEAGLKVLVLEK 34
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 4-37 2.02e-03

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 40.20  E-value: 2.02e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1917973484   4 STNEFDVIVIGGGIMGSATAYQ-TAKRGCRTLLLE 37
Cdd:COG2303     1 MLEEYDYVIVGAGSAGCVLANRlSEDAGLRVLLLE 35
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
4-38 2.12e-03

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 40.16  E-value: 2.12e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1917973484   4 STNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:COG3573     2 AAMDADVIVVGAGLAGLVAAAELADAGRRVLLLDQ 36
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 5-94 2.13e-03

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 40.22  E-value: 2.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   5 TNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQfdlLHHLGsshGESRTIRA------TYPEDYYTDMVLEssKLWREA 78
Cdd:COG1233     1 MMMYDVVVIGAGIGGLAAAALLARAGYRVTVLEK---NDTPG---GRARTFERpgfrfdVGPSVLTMPGVLE--RLFREL 72

                          90
                  ....*....|....*.
gi 1917973484  79 EAEAGYRVYTSTPHLD 94
Cdd:COG1233    73 GLEDYLELVPLDPAYR 88
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 5-96 2.37e-03

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 40.07  E-value: 2.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   5 TNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQfdllHHLGsshGESrTIRATYPedyyTDMVLESSKLWREAEAEAGY 84
Cdd:COG1249     1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEK----GRLG---GTC-LNVGCIP----SKALLHAAEVAHEARHAAEF 68

                          90
                  ....*....|..
gi 1917973484  85 RVYTSTPHLDMG 96
Cdd:COG1249    69 GISAGAPSVDWA 80
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
 9-38 2.52e-03

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 40.21  E-value: 2.52e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:PRK01747  262 DAAIIGGGIAGAALALALARRGWQVTLYEA 291
glycerol3P_GlpB TIGR03378
glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are ...
 8-82 2.54e-03

glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic]


Pssm-ID: 213807  Cd Length: 419  Bit Score: 40.00  E-value: 2.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1917973484   8 FDVIVIGGGIMGSATAYQTAKRGCRTLLLEQ-----------FDLLHHLGSSHGESR------TIRATYPEDYYTDM--- 67
Cdd:TIGR03378   1 FDVIIIGGGLAGLSCALRLAEAGKKCAIIAAgqsalhfssgsLDLLSRLPDGQAVEQpmdaleALAQQAPEHPYSKLgkt 80

                          90
                  ....*....|....*
gi 1917973484  68 VLESSKLWREAEAEA 82
Cdd:TIGR03378  81 KVLALLQWFERLLKA 95
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 7-38 2.60e-03

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 39.83  E-value: 2.60e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1917973484   7 EFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:PTZ00367   33 DYDVIIVGGSIAGPVLAKALSKQGRKVLMLER 64
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
 5-38 2.96e-03

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 39.88  E-value: 2.96e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1917973484   5 TNEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:PRK12834    2 AMDADVIVVGAGLAGLVAAAELADAGKRVLLLDQ 35
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 6-39 3.77e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 39.37  E-value: 3.77e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1917973484   6 NEFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQF 39
Cdd:PRK08849    2 NKYDIAVVGGGMVGAATALGFAKQGRSVAVIEGG 35
PRK07233 PRK07233
hypothetical protein; Provisional
 12-49 5.76e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 38.71  E-value: 5.76e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1917973484  12 VIGGGIMGSATAYQTAKRGCRTLLLEQFDLLHHLGSSH 49
Cdd:PRK07233    4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASF 41
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
7-38 5.98e-03

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 38.40  E-value: 5.98e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1917973484   7 EFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:PRK07608    5 KFDVVVVGGGLVGASLALALAQSGLRVALLAP 36
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-38 8.16e-03

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 38.04  E-value: 8.16e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1917973484   9 DVIVIGGGIMGSATAYQTAKRGCRTLLLEQ 38
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEK 30
PRK05335 PRK05335
tRNA (uracil-5-)-methyltransferase Gid; Reviewed
 10-37 8.25e-03

tRNA (uracil-5-)-methyltransferase Gid; Reviewed


Pssm-ID: 235416  Cd Length: 436  Bit Score: 38.20  E-value: 8.25e-03
                          10        20
                  ....*....|....*....|....*...
gi 1917973484  10 VIVIGGGIMGSATAYQTAKRGCRTLLLE 37
Cdd:PRK05335    5 VNVIGAGLAGSEAAWQLAKRGVPVELYE 32
PRK07121 PRK07121
FAD-binding protein;
7-39 8.29e-03

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 38.33  E-value: 8.29e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1917973484   7 EFDVIVIGGGIMGSATAYQTAKRGCRTLLLEQF 39
Cdd:PRK07121   20 EADVVVVGFGAAGACAAIEAAAAGARVLVLERA 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH