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Conserved domains on  [gi|616614858|gb|KAE14719|]
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hypothetical protein W598_02643 [Staphylococcus aureus VET0340R]

Protein Classification

DUF2513 domain-containing protein( domain architecture ID 10566582)

DUF2513 domain-containing protein similar to Haemophilus influenzae protein HI_1406

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2513 pfam10711
Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.
 2-104 1.72e-28

Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.


:

Pssm-ID: 431452  Cd Length: 100  Bit Score: 99.62  E-value: 1.72e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 616614858    2 KLNHDCVRLLLLEIESNKKIgepltRHNFNDNII-FDKYDFETVMYSLLKLEEAKFICCDLKFIEGRVVSWIIDDITWSG 80
Cdd:pfam10711   1 KRDMDLVRDILLEIEELETG-----PDPVDLAILaIDGYSEEEIAYHLKLLHEAGLIEASGGTSLNSIPSFIVRSLTWDG 75

                          90       100
                  ....*....|....*....|....
gi 616614858   81 HEFLDNIRDNKTWNEVKRVVNKTS 104
Cdd:pfam10711  76 HDFLDNIRDDTVWNKTKDIAKKKG 99
 
Name Accession Description Interval E-value
DUF2513 pfam10711
Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.
 2-104 1.72e-28

Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.


Pssm-ID: 431452  Cd Length: 100  Bit Score: 99.62  E-value: 1.72e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 616614858    2 KLNHDCVRLLLLEIESNKKIgepltRHNFNDNII-FDKYDFETVMYSLLKLEEAKFICCDLKFIEGRVVSWIIDDITWSG 80
Cdd:pfam10711   1 KRDMDLVRDILLEIEELETG-----PDPVDLAILaIDGYSEEEIAYHLKLLHEAGLIEASGGTSLNSIPSFIVRSLTWDG 75

                          90       100
                  ....*....|....*....|....
gi 616614858   81 HEFLDNIRDNKTWNEVKRVVNKTS 104
Cdd:pfam10711  76 HDFLDNIRDDTVWNKTKDIAKKKG 99
 
Name Accession Description Interval E-value
DUF2513 pfam10711
Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.
 2-104 1.72e-28

Hypothetical protein (DUF2513); This family is found in bacteria. The function is not known.


Pssm-ID: 431452  Cd Length: 100  Bit Score: 99.62  E-value: 1.72e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 616614858    2 KLNHDCVRLLLLEIESNKKIgepltRHNFNDNII-FDKYDFETVMYSLLKLEEAKFICCDLKFIEGRVVSWIIDDITWSG 80
Cdd:pfam10711   1 KRDMDLVRDILLEIEELETG-----PDPVDLAILaIDGYSEEEIAYHLKLLHEAGLIEASGGTSLNSIPSFIVRSLTWDG 75

                          90       100
                  ....*....|....*....|....
gi 616614858   81 HEFLDNIRDNKTWNEVKRVVNKTS 104
Cdd:pfam10711  76 HDFLDNIRDDTVWNKTKDIAKKKG 99
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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