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Conserved domains on  [gi|616418395|gb|KAC23578|]
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hypothetical protein W510_00260 [Staphylococcus aureus VET0215R]

Protein Classification

DUF3310 domain-containing protein( domain architecture ID 10570195)

DUF3310 domain-containing protein similar to Enterobacteria phage nucleotide kinase gp1.7 that catalyzes the phosphorylation of dGMP and dTMP to dGDP and dTDP

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3310 pfam11753
Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of ...
 18-77 2.64e-24

Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of unknown function.


:

Pssm-ID: 432050  Cd Length: 59  Bit Score: 86.20  E-value: 2.64e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 616418395  18 VKQPAHYTYGDIEIIDFIEqvtAQYPPQ--LAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVD 77
Cdd:pfam11753  1 VNHPSHYTKGDIEVIDVIE---AQLTGEefVGFCLGNAIKYVSRAGKKNGLEDLKKAKWYLD 59
 
Name Accession Description Interval E-value
DUF3310 pfam11753
Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of ...
 18-77 2.64e-24

Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of unknown function.


Pssm-ID: 432050  Cd Length: 59  Bit Score: 86.20  E-value: 2.64e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 616418395  18 VKQPAHYTYGDIEIIDFIEqvtAQYPPQ--LAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVD 77
Cdd:pfam11753  1 VNHPSHYTKGDIEVIDVIE---AQLTGEefVGFCLGNAIKYVSRAGKKNGLEDLKKAKWYLD 59
 
Name Accession Description Interval E-value
DUF3310 pfam11753
Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of ...
 18-77 2.64e-24

Protein of unknwon function (DUF3310); This is a family of conserved bacteriophage proteins of unknown function.


Pssm-ID: 432050  Cd Length: 59  Bit Score: 86.20  E-value: 2.64e-24
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 616418395  18 VKQPAHYTYGDIEIIDFIEqvtAQYPPQ--LAFAIGNAIKYLSRAPLKNGHEDLAKAKFYVD 77
Cdd:pfam11753  1 VNHPSHYTKGDIEVIDVIE---AQLTGEefVGFCLGNAIKYVSRAGKKNGLEDLKKAKWYLD 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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