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Conserved domains on  [gi|616275192|gb|KAA91409|]
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DNA mismatch repair protein mutL, partial [Staphylococcus aureus VET0107R]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MutL super family cl33837
DNA mismatch repair ATPase MutL [Replication, recombination and repair];
3-37 8.88e-17

DNA mismatch repair ATPase MutL [Replication, recombination and repair];


The actual alignment was detected with superfamily member COG0323:

Pssm-ID: 440092 [Multi-domain]  Cd Length: 515  Bit Score: 70.46  E-value: 8.88e-17
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 616275192   3 LIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKR 37
Cdd:COG0323  481 LLRDLEATENPYTCPHGRPTWIELSLEELEKLFKR 515
 
Name Accession Description Interval E-value
MutL COG0323
DNA mismatch repair ATPase MutL [Replication, recombination and repair];
3-37 8.88e-17

DNA mismatch repair ATPase MutL [Replication, recombination and repair];


Pssm-ID: 440092 [Multi-domain]  Cd Length: 515  Bit Score: 70.46  E-value: 8.88e-17
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 616275192   3 LIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKR 37
Cdd:COG0323  481 LLRDLEATENPYTCPHGRPTWIELSLEELEKLFKR 515
mutL PRK00095
DNA mismatch repair endonuclease MutL;
3-38 5.03e-16

DNA mismatch repair endonuclease MutL;


Pssm-ID: 234630 [Multi-domain]  Cd Length: 617  Bit Score: 68.32  E-value: 5.03e-16
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 616275192   3 LIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRV 38
Cdd:PRK00095 582 LLRQLEATENPGTCPHGRPTYIELSLSDLEKLFKRI 617
 
Name Accession Description Interval E-value
MutL COG0323
DNA mismatch repair ATPase MutL [Replication, recombination and repair];
3-37 8.88e-17

DNA mismatch repair ATPase MutL [Replication, recombination and repair];


Pssm-ID: 440092 [Multi-domain]  Cd Length: 515  Bit Score: 70.46  E-value: 8.88e-17
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 616275192   3 LIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKR 37
Cdd:COG0323  481 LLRDLEATENPYTCPHGRPTWIELSLEELEKLFKR 515
mutL PRK00095
DNA mismatch repair endonuclease MutL;
3-38 5.03e-16

DNA mismatch repair endonuclease MutL;


Pssm-ID: 234630 [Multi-domain]  Cd Length: 617  Bit Score: 68.32  E-value: 5.03e-16
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 616275192   3 LIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRV 38
Cdd:PRK00095 582 LLRQLEATENPGTCPHGRPTYIELSLSDLEKLFKRI 617
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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