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Conserved domains on  [gi|1903585588|dbj|GGO85554|]
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hypothetical protein GCM10012280_19600 [Wenjunlia tyrosinilytica]

Protein Classification

class I SAM-dependent methyltransferase( domain architecture ID 10614797)

class I SAM-dependent methyltransferase catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor

CATH:  2.20.25.110
EC:  2.1.-.-|2.1.1.-
Gene Ontology:  GO:0032259|GO:0008757|GO:0008168|GO:1904047
PubMed:  12504684|12826405

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 54-145 7.95e-19

Methyltransferase domain; This family appears to be a methyltransferase domain.


:

Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 77.99  E-value: 7.95e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  54 VLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSHYGRLN-TLTFVAGHALHyLQASDDHFDAIYS--VFGAIGLV 130
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGlNVEFVQGDAED-LPFPDGSFDLVVSsgVLHHLPDP 79

                          90
                  ....*....|....*
gi 1903585588 131 APELLLPAIAQHLKP 145
Cdd:pfam13649  80 DLEAALREIARVLKP 94
 
Name Accession Description Interval E-value
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 54-145 7.95e-19

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 77.99  E-value: 7.95e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  54 VLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSHYGRLN-TLTFVAGHALHyLQASDDHFDAIYS--VFGAIGLV 130
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGlNVEFVQGDAED-LPFPDGSFDLVVSsgVLHHLPDP 79

                          90
                  ....*....|....*
gi 1903585588 131 APELLLPAIAQHLKP 145
Cdd:pfam13649  80 DLEAALREIARVLKP 94
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 52-155 4.67e-18

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 76.98  E-value: 4.67e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  52 KRVLELGCGPGHNAAHLAtRYGAQATGVDLVGLQVRRARSHYGRLNtLTFVAGhALHYLQASDDHFDAIYSVFGAIGLVA 131
Cdd:COG2227    26 GRVLDVGCGTGRLALALA-RRGADVTGVDISPEALEIARERAAELN-VDFVQG-DLEDLPLEDGSFDLVICSEVLEHLPD 102

                          90       100
                  ....*....|....*....|....
gi 1903585588 132 PELLLPAIAQHLKPRCTLAFSVPH 155
Cdd:COG2227   103 PAALLRELARLLKPGGLLLLSTPN 126
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 53-155 1.60e-12

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 61.68  E-value: 1.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  53 RVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSH--YGRLNTLTFVAGHALHYLQASDDHFDAIYSVFGAIGLV 130
Cdd:cd02440     1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELARKAaaALLADNVEVLKGDAEELPPEADESFDVIISDPPLHHLV 80

                          90       100
                  ....*....|....*....|....*.
gi 1903585588 131 A-PELLLPAIAQHLKPRCTLAFSVPH 155
Cdd:cd02440    81 EdLARFLEEARRLLKPGGVLVLTLVL 106
PLN02244 PLN02244
tocopherol O-methyltransferase
 52-122 7.96e-06

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 45.89  E-value: 7.96e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1903585588  52 KRVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARS---HYGRLNTLTFVAGHALHyLQASDDHFDAIYS 122
Cdd:PLN02244  120 KRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANAlaaAQGLSDKVSFQVADALN-QPFEDGQFDLVWS 192
BioC TIGR02072
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin ...
 47-152 1.96e-05

malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]


Pssm-ID: 273953 [Multi-domain]  Cd Length: 240  Bit Score: 44.20  E-value: 1.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  47 PDLCRKRVLELGCGPGHNAAHLATRY-GAQATGVDLVGLQVRRARSHYGRlnTLTFVAGHALHyLQASDDHFDAIYSVFG 125
Cdd:TIGR02072  31 GIFIPASVLDIGCGTGYLTRALLKRFpQAEFIALDISAGMLAQAKTKLSE--NVQFICGDAEK-LPLEDSSFDLIVSNLA 107

                          90       100
                  ....*....|....*....|....*..
gi 1903585588 126 AIGLVAPELLLPAIAQHLKPRCTLAFS 152
Cdd:TIGR02072 108 LQWCDDLSQALSELARVLKPGGLLAFS 134
 
Name Accession Description Interval E-value
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 54-145 7.95e-19

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 77.99  E-value: 7.95e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  54 VLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSHYGRLN-TLTFVAGHALHyLQASDDHFDAIYS--VFGAIGLV 130
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGlNVEFVQGDAED-LPFPDGSFDLVVSsgVLHHLPDP 79

                          90
                  ....*....|....*
gi 1903585588 131 APELLLPAIAQHLKP 145
Cdd:pfam13649  80 DLEAALREIARVLKP 94
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 52-155 4.67e-18

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 76.98  E-value: 4.67e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  52 KRVLELGCGPGHNAAHLAtRYGAQATGVDLVGLQVRRARSHYGRLNtLTFVAGhALHYLQASDDHFDAIYSVFGAIGLVA 131
Cdd:COG2227    26 GRVLDVGCGTGRLALALA-RRGADVTGVDISPEALEIARERAAELN-VDFVQG-DLEDLPLEDGSFDLVICSEVLEHLPD 102

                          90       100
                  ....*....|....*....|....
gi 1903585588 132 PELLLPAIAQHLKPRCTLAFSVPH 155
Cdd:COG2227   103 PAALLRELARLLKPGGLLLLSTPN 126
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
53-153 1.19e-15

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 69.85  E-value: 1.19e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  53 RVLELGCGPGHNAAHLATRY-GAQATGVDLVGLQVRRARSHYGRlntLTFVAGHALHYlqASDDHFDAIYSvFGAIGLVA 131
Cdd:COG4106     4 RVLDLGCGTGRLTALLAERFpGARVTGVDLSPEMLARARARLPN---VRFVVADLRDL--DPPEPFDLVVS-NAALHWLP 77

                          90       100
                  ....*....|....*....|...
gi 1903585588 132 -PELLLPAIAQHLKPRCTLAFSV 153
Cdd:COG4106    78 dHAALLARLAAALAPGGVLAVQV 100
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 53-154 1.59e-14

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 68.42  E-value: 1.59e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  53 RVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSH---YGRLNTLTFVAGHALHYlqASDDHFDAIYSV--FGAI 127
Cdd:COG2230    54 RVLDIGCGWGGLALYLARRYGVRVTGVTLSPEQLEYARERaaeAGLADRVEVRLADYRDL--PADGQFDAIVSIgmFEHV 131

                          90       100
                  ....*....|....*....|....*..
gi 1903585588 128 GLVAPELLLPAIAQHLKPRCTLAFSVP 154
Cdd:COG2230   132 GPENYPAYFAKVARLLKPGGRLLLHTP 158
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 52-156 7.21e-14

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 66.56  E-value: 7.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  52 KRVLELGCGPGHNAAHLAtRYGAQATGVDLVGLQVRRARSHYGRLNT-LTFVAGHALHyLQASDDHFDAIYSVFGAIGLV 130
Cdd:COG2226    24 ARVLDLGCGTGRLALALA-ERGARVTGVDISPEMLELARERAAEAGLnVEFVVGDAED-LPFPDGSFDLVISSFVLHHLP 101

                          90       100
                  ....*....|....*....|....*.
gi 1903585588 131 APELLLPAIAQHLKPRCTLAFSVPHP 156
Cdd:COG2226   102 DPERALAEIARVLKPGGRLVVVDFSP 127
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 53-162 7.55e-14

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 67.63  E-value: 7.55e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  53 RVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSHYGR--LNTLTFVAGHALHYLQASDDHFDAIYSvFGAIGLV 130
Cdd:COG0500    29 RVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIALARARAAKagLGNVEFLVADLAELDPLPAESFDLVVA-FGVLHHL 107

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1903585588 131 APEL---LLPAIAQHLKPRCTLAFSVPHPQRGGRR 162
Cdd:COG0500   108 PPEEreaLLRELARALKPGGVLLLSASDAAAALSL 142
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 53-155 1.60e-12

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 61.68  E-value: 1.60e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  53 RVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSH--YGRLNTLTFVAGHALHYLQASDDHFDAIYSVFGAIGLV 130
Cdd:cd02440     1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELARKAaaALLADNVEVLKGDAEELPPEADESFDVIISDPPLHHLV 80

                          90       100
                  ....*....|....*....|....*.
gi 1903585588 131 A-PELLLPAIAQHLKPRCTLAFSVPH 155
Cdd:cd02440    81 EdLARFLEEARRLLKPGGVLVLTLVL 106
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 55-151 8.93e-12

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 59.60  E-value: 8.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  55 LELGCGPGHNAAHLAtRYGAQATGVDLVGLQVRRARSHYGRLNtLTFVAGHALHyLQASDDHFDAIYSVFGAIGLVAPEL 134
Cdd:pfam08241   1 LDVGCGTGLLTELLA-RLGARVTGVDISPEMLELAREKAPREG-LTFVVGDAED-LPFPDNSFDLVLSSEVLHHVEDPER 77

                          90
                  ....*....|....*..
gi 1903585588 135 LLPAIAQHLKPRCTLAF 151
Cdd:pfam08241  78 ALREIARVLKPGGILII 94
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
52-161 3.37e-11

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 60.01  E-value: 3.37e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  52 KRVLELGCGPGHNAAHLAtRYGAQATGVDLVGLQVRRARSH--YGRLNTLTFVAghalhyLQASDDHFDAIYS--VFGAI 127
Cdd:COG4976    48 GRVLDLGCGTGLLGEALR-PRGYRLTGVDLSEEMLAKAREKgvYDRLLVADLAD------LAEPDGRFDLIVAadVLTYL 120

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1903585588 128 GlvAPELLLPAIAQHLKPRCTLAFSVPHPQRGGR 161
Cdd:COG4976   121 G--DLAAVFAGVARALKPGGLFIFSVEDADGSGR 152
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
 42-154 1.03e-07

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 50.12  E-value: 1.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  42 AEILGPDLCRKRVLELGCGPGHNAAHLAtRYGAQATGVDLVGLQVRRARSHYgrlntltFVAGHALHYLQASDDHFDAIY 121
Cdd:pfam13489  14 LRLLPKLPSPGRVLDFGCGTGIFLRLLR-AQGFSVTGVDPSPIAIERALLNV-------RFDQFDEQEAAVPAGKFDVIV 85

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1903585588 122 S--VFGAIGlvAPELLLPAIAQHLKPRCTLAFSVP 154
Cdd:pfam13489  86 AreVLEHVP--DPPALLRQIAALLKPGGLLLLSTP 118
PLN02244 PLN02244
tocopherol O-methyltransferase
 52-122 7.96e-06

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 45.89  E-value: 7.96e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1903585588  52 KRVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARS---HYGRLNTLTFVAGHALHyLQASDDHFDAIYS 122
Cdd:PLN02244  120 KRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANAlaaAQGLSDKVSFQVADALN-QPFEDGQFDLVWS 192
BioC TIGR02072
malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin ...
 47-152 1.96e-05

malonyl-acyl carrier protein O-methyltransferase BioC; This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]


Pssm-ID: 273953 [Multi-domain]  Cd Length: 240  Bit Score: 44.20  E-value: 1.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  47 PDLCRKRVLELGCGPGHNAAHLATRY-GAQATGVDLVGLQVRRARSHYGRlnTLTFVAGHALHyLQASDDHFDAIYSVFG 125
Cdd:TIGR02072  31 GIFIPASVLDIGCGTGYLTRALLKRFpQAEFIALDISAGMLAQAKTKLSE--NVQFICGDAEK-LPLEDSSFDLIVSNLA 107

                          90       100
                  ....*....|....*....|....*..
gi 1903585588 126 AIGLVAPELLLPAIAQHLKPRCTLAFS 152
Cdd:TIGR02072 108 LQWCDDLSQALSELARVLKPGGLLAFS 134
PRK08317 PRK08317
hypothetical protein; Provisional
 53-123 2.00e-05

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 44.16  E-value: 2.00e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1903585588  53 RVLELGCGPGHNAAHLATRYGA--QATGVDLVGLQVRRARSH-YGRLNTLTFVAGHALHyLQASDDHFDAIYSV 123
Cdd:PRK08317   22 RVLDVGCGPGNDARELARRVGPegRVVGIDRSEAMLALAKERaAGLGPNVEFVRGDADG-LPFPDGSFDAVRSD 94
Methyltransf_12 pfam08242
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 55-149 5.06e-05

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 400515 [Multi-domain]  Cd Length: 98  Bit Score: 41.20  E-value: 5.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  55 LELGCGPGHNAAHLATRY-GAQATGVDLVGLQVRRARSHYGRL--NTLTFVAGHALHYLQASDDHFDAIYS--VFGAIGl 129
Cdd:pfam08242   1 LEIGCGTGTLLRALLEALpGLEYTGLDISPAALEAARERLAALglLNAVRVELFQLDLGELDPGSFDVVVAsnVLHHLA- 79

                          90       100
                  ....*....|....*....|
gi 1903585588 130 vAPELLLPAIAQHLKPRCTL 149
Cdd:pfam08242  80 -DPRAVLRNIRRLLKPGGVL 98
PRK11705 PRK11705
cyclopropane fatty acyl phospholipid synthase;
50-123 8.84e-05

cyclopropane fatty acyl phospholipid synthase;


Pssm-ID: 183282  Cd Length: 383  Bit Score: 42.91  E-value: 8.84e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  50 CRK-------RVLELGCGPGHNAAHLATRYGAQATGVDLVGLQVRRARSHYGRLNtLTFvaghalhYLQ---ASDDHFDA 119
Cdd:PRK11705  160 CRKlqlkpgmRVLDIGCGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEI-------RLQdyrDLNGQFDR 231


                  ....
gi 1903585588 120 IYSV 123
Cdd:PRK11705  232 IVSV 235
ubiE PRK00216
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol ...
 53-120 5.06e-04

bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE;


Pssm-ID: 234689 [Multi-domain]  Cd Length: 239  Bit Score: 40.14  E-value: 5.06e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1903585588  53 RVLELGCGPGHNAAHLATRYG--AQATGVDL------VGLQvrRARSHYGRLNtLTFVAGHALHyLQASDDHFDAI 120
Cdd:PRK00216   54 KVLDLACGTGDLAIALAKAVGktGEVVGLDFsegmlaVGRE--KLRDLGLSGN-VEFVQGDAEA-LPFPDNSFDAV 125
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
 52-168 8.54e-04

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 38.55  E-value: 8.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1903585588  52 KRVLELGCGPGHNAAHLATRYGAQA--TGVDLVGLQVRRARSHYGRLN--TLTFVAGHALHYLQA-SDDHFDAIYSvFGA 126
Cdd:pfam13847   5 MRVLDLGCGTGHLSFELAEELGPNAevVGIDISEEAIEKARENAQKLGfdNVEFEQGDIEELPELlEDDKFDVVIS-NCV 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1903585588 127 IGLVA-PELLLPAIAQHLKPRCTLAFSVPHPQRGGRRPSTDDR 168
Cdd:pfam13847  84 LNHIPdPDKVLQEILRVLKPGGRLIISDPDSLAELPAHVKEDS 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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