|
Name |
Accession |
Description |
Interval |
E-value |
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
30-292 |
1.88e-96 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 284.62 E-value: 1.88e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 30 GYILIRGLPHVTWQFLTNPASTFTKGGGIGVQLFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKNWVTNVVRTAIEVLSS 109
Cdd:COG0581 11 GTVLVKGLPALSWEFLTSSPSPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLARLIRFAIDVLAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 110 LPSVVVGLFGFLVFVIQFKLGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPN 189
Cdd:COG0581 91 VPSIVYGLFGYALFVLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 190 IITGMILGAGRIFGEAAALIYTAGQSApsldftnwnptyiASPLNPMRPAETLAVHIWKINSEGImPDATAVSAGASAVL 269
Cdd:COG0581 171 ILTGVILAIARAAGETAPLLFTAGVSP-------------FLPLSLFDPFATLPVHIYNLASSPY-PAAQELAWAAALVL 236
|
250 260
....*....|....*....|...
gi 1681436014 270 IIAVLLFNWLARVIGKRVYRKMT 292
Cdd:COG0581 237 LLLVLLLNLLARLLRRRFRKKLK 259
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
7-289 |
2.79e-74 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 228.66 E-value: 2.79e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 7 DKVATGVLTLIAGLIVLLLASLLGYILIRGLPHVTWQFLTNPASTFTKGGGIGVQLFNSFYLLVIAMVISVPLSIGAGIY 86
Cdd:TIGR00974 1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 87 LAEYAPKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQ-FKLGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQRE 165
Cdd:TIGR00974 81 LAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVLTyLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKDLRE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 166 AGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSAPsldftnwnptyiaSPLNPMRPAETLAVH 245
Cdd:TIGR00974 161 ASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAF-------------TPPNLFDPFATLPVL 227
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1681436014 246 IWKINSEGIMPDATAVSAGASAVLIIAVLLFNWLARVIGKRVYR 289
Cdd:TIGR00974 228 IYNLASEGPYVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFKK 271
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
53-283 |
4.52e-34 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 125.57 E-value: 4.52e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 53 TKGGGIGVQLFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFKlGFS 132
Cdd:PRK11268 74 TAGGGLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME-HFS 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 133 ILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTA 212
Cdd:PRK11268 153 GWAGVIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTA 232
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1681436014 213 gqsapsLDFTNWNptyiaspLNPMRPAETLAVHIWKInseGIMPDATAVSAGASAVLII--AVLLFNWLARVI 283
Cdd:PRK11268 233 ------LSNQFWS-------TDMMQPIANLPVTIFKF---AMSPFAEWQQLAWAGVLLItlCVLLLNILARVV 289
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
62-234 |
6.95e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 79.63 E-value: 6.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 62 LFNSFYLLVIAMVISVPLSIGAGIYLAEYapKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFK---LGFSILAGAL 138
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARK--RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGwgiLPGLGLPALI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 139 ALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSAPS 218
Cdd:cd06261 79 LALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
|
170
....*....|....*.
gi 1681436014 219 LDFTNWNPTYIASPLN 234
Cdd:cd06261 159 PGTGLLLIFAILFPGD 174
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
80-287 |
5.64e-13 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 65.78 E-value: 5.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 80 SIGAGIYLAEYaPKNWVTNVVRTAIEVLSSLPSVVVGLFgFLVFVIQFKLGFSILAGALALTVFNLPLLTRNVEDALKSI 159
Cdd:pfam00528 1 GIPLGIIAALR-RGRRLDRLLRPLIDLLQALPSFVLAIL-LVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 160 HFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSApsldftnwnptyiasplnpmrpa 239
Cdd:pfam00528 79 PSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPG----------------------- 135
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1681436014 240 etLAVHIWKINSEGIMPDATAVSAGASAVLIIAVLLFNWLARVIGKRV 287
Cdd:pfam00528 136 --LGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
69-213 |
3.36e-07 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 49.47 E-value: 3.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 69 LVIAMVISVPLsiGAGIYLAEYAPKNWVTNVVRTaievLSSLPSVVVGLFGFLVFVIQFKLGFSIL-----AGALALTVF 143
Cdd:NF038017 9 TLIAALIGIPL--GALLALRRFPGRRLVISLLNT----LMGLPPVVVGLIVYLLLSRSGPLGFLGLlytptAMIIAQAVL 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 144 NLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKhVIIPEALPNIITGMILGAGRIFGEAAALIYTAG 213
Cdd:NF038017 83 ALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMVGG 151
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
30-292 |
1.88e-96 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 284.62 E-value: 1.88e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 30 GYILIRGLPHVTWQFLTNPASTFTKGGGIGVQLFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKNWVTNVVRTAIEVLSS 109
Cdd:COG0581 11 GTVLVKGLPALSWEFLTSSPSPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLARLIRFAIDVLAG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 110 LPSVVVGLFGFLVFVIQFKLGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPN 189
Cdd:COG0581 91 VPSIVYGLFGYALFVLTLGLGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 190 IITGMILGAGRIFGEAAALIYTAGQSApsldftnwnptyiASPLNPMRPAETLAVHIWKINSEGImPDATAVSAGASAVL 269
Cdd:COG0581 171 ILTGVILAIARAAGETAPLLFTAGVSP-------------FLPLSLFDPFATLPVHIYNLASSPY-PAAQELAWAAALVL 236
|
250 260
....*....|....*....|...
gi 1681436014 270 IIAVLLFNWLARVIGKRVYRKMT 292
Cdd:COG0581 237 LLLVLLLNLLARLLRRRFRKKLK 259
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
7-289 |
2.79e-74 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 228.66 E-value: 2.79e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 7 DKVATGVLTLIAGLIVLLLASLLGYILIRGLPHVTWQFLTNPASTFTKGGGIGVQLFNSFYLLVIAMVISVPLSIGAGIY 86
Cdd:TIGR00974 1 DKIFTFISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 87 LAEYAPKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQ-FKLGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQRE 165
Cdd:TIGR00974 81 LAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYGFFVLTyLGGGFSLLAGALALALLILPVIIRTTEEALKAVPKDLRE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 166 AGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSAPsldftnwnptyiaSPLNPMRPAETLAVH 245
Cdd:TIGR00974 161 ASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAF-------------TPPNLFDPFATLPVL 227
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1681436014 246 IWKINSEGIMPDATAVSAGASAVLIIAVLLFNWLARVIGKRVYR 289
Cdd:TIGR00974 228 IYNLASEGPYVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFKK 271
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
4-290 |
5.91e-47 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 159.49 E-value: 5.91e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 4 KKWDKVATGVLTLIAGLIVLLLASLLGYILIRGLP----HVTWQFLTNPA-STFTKGG--GIGVQLFNSFYLLVIAMVIS 76
Cdd:COG0573 14 RLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPafqeVGLLEFLTGTEwNPVSSNGefGILPLIVGTLLVSLIALLIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 77 VPLSIGAGIYLAEYAPKnWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFK-------LGFSILAGALALTVFNLPLLT 149
Cdd:COG0573 94 VPLGLGIAIFLSEYAPP-RLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRdlfpwppSGFSLLTAGIVLAIMILPTIT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 150 RNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSApsldftnwnptyi 229
Cdd:COG0573 173 SLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAVLMVAGNAP------------- 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1681436014 230 ASPLNPMRPAETLAVHIwkINSegiMPDATAVSAGASA------VLIIAVLLFNWLARVIGKRVYRK 290
Cdd:COG0573 240 QIPFSLFDPGRTLTALI--ALE---FGEAPFGSLHYSAlfalglVLFVITLLVNLLARLIVRRYREK 301
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
7-287 |
8.78e-36 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 130.08 E-value: 8.78e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 7 DKVATGVLTLIAGLIVLLLASLLGYILIRGLP----HVTWQFLT----NPASTFTKG-GGIGVQLFNSFYLLVIAMVISV 77
Cdd:TIGR02138 1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPafekNGILNFLTgtvwDPGSGPVQEqYGALPLIVGTLITSLIALLIAV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 78 PLSIGAGIYLAEYAPKnWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFK----------------LGFSILAGALALT 141
Cdd:TIGR02138 81 PVGIGIAIFLSEIAPK-RVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKphfqpflgsnlgliplFGGPILTAGIVLA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 142 VFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSAPSldf 221
Cdd:TIGR02138 160 IMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIGNVFPI--- 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1681436014 222 tnwnptyiaSPLNPMRPAETLAVhiwKINSEgiMPDATAVSAGASA------VLIIAVLLFNWLARVIGKRV 287
Cdd:TIGR02138 237 ---------SPLSLFDPGTTITS---LIANQ--FGEASGGSVHTSAlfalglVLFVITLLVNILARYIVRRR 294
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
53-283 |
4.52e-34 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 125.57 E-value: 4.52e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 53 TKGGGIGVQLFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFKlGFS 132
Cdd:PRK11268 74 TAGGGLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQME-HFS 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 133 ILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTA 212
Cdd:PRK11268 153 GWAGVIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGETAPLLFTA 232
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1681436014 213 gqsapsLDFTNWNptyiaspLNPMRPAETLAVHIWKInseGIMPDATAVSAGASAVLII--AVLLFNWLARVI 283
Cdd:PRK11268 233 ------LSNQFWS-------TDMMQPIANLPVTIFKF---AMSPFAEWQQLAWAGVLLItlCVLLLNILARVV 289
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
62-234 |
6.95e-18 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 79.63 E-value: 6.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 62 LFNSFYLLVIAMVISVPLSIGAGIYLAEYapKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFK---LGFSILAGAL 138
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARK--RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGwgiLPGLGLPALI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 139 ALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSAPS 218
Cdd:cd06261 79 LALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPG 158
|
170
....*....|....*.
gi 1681436014 219 LDFTNWNPTYIASPLN 234
Cdd:cd06261 159 PGTGLLLIFAILFPGD 174
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
62-290 |
9.71e-15 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 72.45 E-value: 9.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 62 LFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKnwvtnvVRTAIEVLSSL----PSVVVGLfGFLVFVIQFKLGFSILAGA 137
Cdd:COG1177 63 LLNSLLIALLSTLLATVLGTPAALALARYRFR------GRRLLLALLLLplvvPGIVLGV-ALLLLFSALGLSGGLWGLI 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 138 LALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSAp 217
Cdd:COG1177 136 LAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGV- 214
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1681436014 218 sldftnwnptyiasplnpmrpaETLAVHIWKINSEGIMPDATAVsagaSAVLIIAVLLFNWLARVIGKRVYRK 290
Cdd:COG1177 215 ----------------------TTLPVYIYSMIRRGISPEINAL----STLLILLSLLLLLLAERLRRRGERR 261
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
30-286 |
3.02e-13 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 69.42 E-value: 3.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 30 GYILIRGLPHVTWQFLTNPASTFTKGGGIGVQ-LFNSFYLLVIAMVISVPLSIGAGIYLAEYapKNWVTNVVRTAIEVLS 108
Cdd:COG1178 307 LALLLWSLTKALDDNLTLDNYRFVLLDPSLLRaLLNSLLLALLAALLAVLLALLLAYLVRRR--RGRLARLLDRLAMLPY 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 109 SLPSVVVGLfGFLVFVIQFK---LGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPE 185
Cdd:COG1178 385 AVPGIVLGL-GLLLLFNRPLpllLYGTLAILVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPL 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 186 ALPNIITGMILGAGRIFGE--AAALIYTAGQsapsldftnwnptyiasplnpmrpaETLAVHIWKINSEGIMPDAtavsA 263
Cdd:COG1178 464 LRPGLLAAALLVFVTSMKElsATLLLRPPGF-------------------------ETLAVLIYQLASSGRYGEA----A 514
|
250 260
....*....|....*....|...
gi 1681436014 264 GASAVLIIAVLLFNWLARVIGKR 286
Cdd:COG1178 515 ALALLLVLVSLLPVLLLERLLGR 537
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
80-287 |
5.64e-13 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 65.78 E-value: 5.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 80 SIGAGIYLAEYaPKNWVTNVVRTAIEVLSSLPSVVVGLFgFLVFVIQFKLGFSILAGALALTVFNLPLLTRNVEDALKSI 159
Cdd:pfam00528 1 GIPLGIIAALR-RGRRLDRLLRPLIDLLQALPSFVLAIL-LVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 160 HFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALIYTAGQSApsldftnwnptyiasplnpmrpa 239
Cdd:pfam00528 79 PSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPG----------------------- 135
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1681436014 240 etLAVHIWKINSEGIMPDATAVSAGASAVLIIAVLLFNWLARVIGKRV 287
Cdd:pfam00528 136 --LGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLLDPRV 181
|
|
| pstC |
PRK11275 |
phosphate ABC transporter permease PstC; |
70-213 |
1.76e-12 |
|
phosphate ABC transporter permease PstC;
Pssm-ID: 183070 Cd Length: 319 Bit Score: 66.64 E-value: 1.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 70 VIAMVISVPLSIGAGIYLAEYAPkNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFK--------------------- 128
Cdd:PRK11275 83 FIALLIAVPVSFGIALFLTELAP-GWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFAtyfqepvgnvlsnipivgalf 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 129 ----LGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGE 204
Cdd:PRK11275 162 sgpaFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGE 241
|
....*....
gi 1681436014 205 AAALIYTAG 213
Cdd:PRK11275 242 TMAVTFIIG 250
|
|
| HisM |
COG0765 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
42-191 |
2.04e-10 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 59.32 E-value: 2.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 42 WQFLTNPASTFTKGggigvqLFNSFYLLVIAMVISVPLsiGAGIYLAEYAPKNWVTNVVRTAIEVLSSLPSVVVgLFgFL 121
Cdd:COG0765 5 FSVLLDYLPLLLEG------LLVTLLLTVLAIVLGLVL--GLLLALARLSPNPVLRWLATAYVEFFRGTPLLVQ-LF-FI 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1681436014 122 VFVI-QFKLGFS-ILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNII 191
Cdd:COG0765 75 YFGLpLLGIDLSpFVAAVIALTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIIL 146
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
70-191 |
1.03e-09 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 57.55 E-value: 1.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 70 VIAMVISVPLSIGAgiylAE-YAPKNWVTNVVRTAIEVLSSLPSVVVGLfgflVFVIQFklGFSILAGALALTVFNLPLL 148
Cdd:TIGR01097 72 VLAAVLAVPLALLA----ARnITPSPWLYGLARLLLNFLRAIPELVWAL----IFVAAV--GLGPFAGVLALAFHTVGFL 141
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1681436014 149 TRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNII 191
Cdd:TIGR01097 142 GKLFAEAIEEVDPGPVEALRATGASKLQVIRYGVLPQVLPQFL 184
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
56-199 |
3.53e-09 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 56.31 E-value: 3.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 56 GGIGVQLFNSFYLLVIAMVISVPLSIGAGIYLAEYApknWVTNVVRTAIEVLSSLPSVVVGLFGFLVFviqfklGFSILA 135
Cdd:COG0600 57 GELWEHLLASLLRVLLGFALAALLGVPLGLLLGLSR---LLRRLLDPLLVFLRPIPPLALAPLLILWF------GIGEAS 127
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1681436014 136 GALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAG 199
Cdd:COG0600 128 KIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALG 191
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
70-191 |
5.08e-09 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 55.47 E-value: 5.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 70 VIAMVISVPLSIGAgiylAE-YAPKNWVTNVVRTAIEVLSSLPSVVVGLfgflVFVIQFklGFSILAGALALTVFNLPLL 148
Cdd:COG3639 65 LLGAVLALPLAFLA----ARnLAPNPWVRLLARRLLNVLRAIPELVWAL----IFVAAV--GLGPFAGVLALAIHTIGFL 134
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1681436014 149 TRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNII 191
Cdd:COG3639 135 GKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVLPQVLPQFL 177
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
70-209 |
1.43e-08 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 54.16 E-value: 1.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 70 VIAMVISVPLSIGAGIYLAEYapKNWVTNVVRTAIEVLSSLPSVVVG-----LFG-------FLVFVIQFKLGFSILAGA 137
Cdd:PRK09421 19 SVAVLFSLPFGILVAWLLARC--RFPGKSLLDSLLHLPLVLPPVVTGyllliSMGrrgfigqWLYEWFGISFAFSWRGAA 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1681436014 138 LALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAALI 209
Cdd:PRK09421 97 LAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGATI 168
|
|
| MetP |
COG2011 |
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
62-194 |
6.77e-08 |
|
ABC-type methionine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 441614 Cd Length: 220 Bit Score: 51.98 E-value: 6.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 62 LFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKN-----WVTNVVRTAIEVLSSLPSVVvglfgFLVFVI---QFKLGFSI 133
Cdd:COG2011 16 TGETLYMVGVSTLIAVLLGLPLGVLLVLTRPGGllpnpVLYRVLGVIVNIFRSIPFII-----LLVALIpltRLIVGTSI 90
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1681436014 134 --LAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGM 194
Cdd:COG2011 91 gtTAAIVPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGL 153
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
69-213 |
3.36e-07 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 49.47 E-value: 3.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 69 LVIAMVISVPLsiGAGIYLAEYAPKNWVTNVVRTaievLSSLPSVVVGLFGFLVFVIQFKLGFSIL-----AGALALTVF 143
Cdd:NF038017 9 TLIAALIGIPL--GALLALRRFPGRRLVISLLNT----LMGLPPVVVGLIVYLLLSRSGPLGFLGLlytptAMIIAQAVL 82
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 144 NLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKhVIIPEALPNIITGMILGAGRIFGEAAALIYTAG 213
Cdd:NF038017 83 ALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMVGG 151
|
|
| DppB |
COG0601 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
58-203 |
5.78e-06 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440366 [Multi-domain] Cd Length: 314 Bit Score: 46.98 E-value: 5.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 58 IGVQLFNSFYLLVIAMVISVPLSIGAGIYLAeYAPKNWVTNVVRTAIEVLSSLPSVVVGLFGFLVFVIQFKL-----GFS 132
Cdd:COG0601 91 IAERLPVTLELALLALLLALLIGIPLGILAA-LRRGSWLDRLITVLALLGISIPSFWLGLLLILLFAVKLGWlpvsgRVS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 133 ILAG-----------ALALTVFNLPLLTR----NVEDALKSIHFTqreAGLALGLSRYETVKHVIIPEALPNIITGMILG 197
Cdd:COG0601 170 PWEDfldalrhlilpALTLALGSLAGIARltrsSMLEVLGQDYVR---TARAKGLSERRVLLRHALRNALIPVVTVLGLQ 246
|
....*.
gi 1681436014 198 AGRIFG 203
Cdd:COG0601 247 LGGLLG 252
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
62-286 |
2.31e-05 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 45.54 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 62 LFNSFYLLVIAMVISVPLSIGAGIYLAEYAPKnwvtnvVRTAIEVLSSLPSVV---------VGLFGF---------LVF 123
Cdd:COG1178 56 LGNTLLLALLVTLLSLLLGVPLAWLLARTDFP------GRRLLRWLLLLPLALppyvvalawIALFGPngllntllrALF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 124 VIQFKLGFSILAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNIITGMILgagrIFG 203
Cdd:COG1178 130 GLEPPDIYGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALL----VFL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 204 EAAAliytagqsapslDFTnwNPTYIASPLNpmrpaeTLAVHIWK-INSEGIMPDATAVsagaSAVLIIAVLLFNWLARV 282
Cdd:COG1178 206 LCLA------------DFG--TPLVLGGGYT------TLTTAIYQaWLGDFDLGAAAAL----ALVLLLLVLLLLLLERR 261
|
....
gi 1681436014 283 IGKR 286
Cdd:COG1178 262 LRRR 265
|
|
| glnP |
PRK09494 |
glutamine ABC transporter permease protein; Reviewed |
152-187 |
2.69e-04 |
|
glutamine ABC transporter permease protein; Reviewed
Pssm-ID: 181907 [Multi-domain] Cd Length: 219 Bit Score: 41.19 E-value: 2.69e-04
10 20 30
....*....|....*....|....*....|....*.
gi 1681436014 152 VEDALKSIHFTQREAGLALGLSRYETVKHVIIPEAL 187
Cdd:PRK09494 109 TRGAVLSIHKGFREAGLALGLSRRETLRYVIGPLAL 144
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
70-208 |
3.31e-04 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 41.25 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 70 VIAMVISVPLSIGAGIyLAEYAPKnWVTNVVRTAIEVLSSLPSVVvglfgfLVFVIQFKLGFSILAGALALTVFNLPLLT 149
Cdd:COG1173 86 LLAVLIALVIGVLLGL-LAGYFGG-WVDAVLMRLVDVLLAFPSLL------LAIALVAVLGPGLLNVILALGLTGWPGYA 157
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1681436014 150 RNVEDALKSIhfTQRE---AGLALGLSRYETVKHVIIPEALPNIITGMILGAGRIFGEAAAL 208
Cdd:COG1173 158 RLVRAQVLSL--REREyveAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAILAEAGL 217
|
|
| PRK11123 |
PRK11123 |
arginine ABC transporter permease ArtQ; |
63-188 |
2.02e-03 |
|
arginine ABC transporter permease ArtQ;
Pssm-ID: 182979 [Multi-domain] Cd Length: 238 Bit Score: 38.89 E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 63 FNSFYLLVIAMVISVPL---SIGAGIYLA---------EYAPKNWVTNVVRTaieVLSSLPSVVVGLF------------ 118
Cdd:PRK11123 1 MNEFFPLASAAGMTVGLavcALIVGLALAmlfavwesaKWRPVAWPGTALVT---LLRGLPEILVVLFiyfgssqllltl 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 119 --GFLV--FVIQFKLGFSI--------LAGALALTVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPE- 185
Cdd:PRK11123 78 sdGFTLnlGFVQIPVQMDIenfevspfLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQm 157
|
....*.
gi 1681436014 186 ---ALP 188
Cdd:PRK11123 158 wrhALP 163
|
|
| PRK10782 |
PRK10782 |
D-methionine ABC transporter permease MetI; |
66-191 |
2.71e-03 |
|
D-methionine ABC transporter permease MetI;
Pssm-ID: 182726 Cd Length: 217 Bit Score: 38.18 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1681436014 66 FYLLVIAMVISVPLSIGAGIYLAEYAPknwVTNVVRTAIEVLSSLPSVVVglfgfLVFVIQFK---LGFSI--LAGALAL 140
Cdd:PRK10782 25 FFGFVIGLPVGVLLYVTRPGQIIANAK---LYRTLSALVNIFRSIPFIIL-----LVWMIPFTrviVGTSIglQAAIVPL 96
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1681436014 141 TVFNLPLLTRNVEDALKSIHFTQREAGLALGLSRYETVKHVIIPEALPNII 191
Cdd:PRK10782 97 TVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLV 147
|
|
| |
