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Conserved domains on  [gi|1617669707|dbj|GCT68739|]
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cell division protein DamX [Escherichia coli]

Protein Classification

cell division protein DamX( domain architecture ID 11485075)

cell division protein DamX is a SPOR domain-containing protein that binds to the septal ring and interacts with multiple Fts proteins, including FtsQ and FtsN

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10905 PRK10905
cell division protein DamX; Validated
 105-428 0e+00

cell division protein DamX; Validated


:

Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 531.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 105 MMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAE----NTQQDVSLPPISSTP 180
Cdd:PRK10905    1 MMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEqtagNTQQDVSLPPISSTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 181 TQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQ 260
Cdd:PRK10905   81 TQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 261 AVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 340
Cdd:PRK10905  161 AVIEPKKPQATAKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 341 KSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL 420
Cdd:PRK10905  241 KSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKRAVSTLPADVQAKNPWAKPL 320


                  ....*...
gi 1617669707 421 RQVQADLK 428
Cdd:PRK10905  321 HQVQADLK 328
 
Name Accession Description Interval E-value
PRK10905 PRK10905
cell division protein DamX; Validated
 105-428 0e+00

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 531.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 105 MMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAE----NTQQDVSLPPISSTP 180
Cdd:PRK10905    1 MMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEqtagNTQQDVSLPPISSTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 181 TQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQ 260
Cdd:PRK10905   81 TQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 261 AVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 340
Cdd:PRK10905  161 AVIEPKKPQATAKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 341 KSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL 420
Cdd:PRK10905  241 KSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKRAVSTLPADVQAKNPWAKPL 320


                  ....*...
gi 1617669707 421 RQVQADLK 428
Cdd:PRK10905  321 HQVQADLK 328
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 223-428 2.63e-39

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 146.92  E-value: 2.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 223 LPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPA---APVASTKAPA 299
Cdd:COG3266   249 LIIGSALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAeaaAPQPTAAKPV 328

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 300 ATSTPAPKETATTAPVQTASPAqttaTPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLK-NYVVYET 378
Cdd:COG3266   329 VTETAAPAAPAPEAAAAAAAPA----APAVAKKLAADEQWLASQPASHYTLQLLGASSEAALEAFAAKHSLKgNLWVYPT 404

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1617669707 379 TRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK 428
Cdd:COG3266   405 TRNGKPWYVVVYGSYASRAEAKAAVAALPAELRASKPWVRSIAQVQQELK 454
SPOR pfam05036
SPOR domain; Bacterial SPOR domains bind peptidoglycan (PG) and target proteins to the cell ...
 344-419 1.22e-09

SPOR domain; Bacterial SPOR domains bind peptidoglycan (PG) and target proteins to the cell division site by binding to denuded glycan strands that lack stem peptides. This 70 residue domain is composed of two 35 residue repeats found in proteins involved in sporulation and cell division such as FtsN, DedD, and CwlM. This domain is involved in binding peptidoglycan. Two tandem repeats fold into a pseudo-2-fold symmetric single-domain structure containing numerous contacts between the repeats. FtsN is an essential cell division protein with a simple bitopic topology, a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. These repeats lay at the periplasmic C-terminus. FtsN localizes to the septum ring complex.


Pssm-ID: 461531 [Multi-domain]  Cd Length: 76  Bit Score: 54.29  E-value: 1.22e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1617669707 344 PSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVY-ETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQaKNPWAKP 419
Cdd:pfam05036   1 ASGGYYVQLGAFSNEANAEALAAKLRAKGFAAYvAVTSKGGGLYRVRVGPFASREEARAALKKLKALAG-LSPFVVK 76
 
Name Accession Description Interval E-value
PRK10905 PRK10905
cell division protein DamX; Validated
 105-428 0e+00

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 531.82  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 105 MMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAE----NTQQDVSLPPISSTP 180
Cdd:PRK10905    1 MMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEqtagNTQQDVSLPPISSTP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 181 TQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQ 260
Cdd:PRK10905   81 TQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRQTAKTQTAERPATTRPARKQ 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 261 AVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 340
Cdd:PRK10905  161 AVIEPKKPQATAKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 341 KSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPL 420
Cdd:PRK10905  241 KSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKRAVSTLPADVQAKNPWAKPL 320


                  ....*...
gi 1617669707 421 RQVQADLK 428
Cdd:PRK10905  321 HQVQADLK 328
PRK11901 PRK11901
hypothetical protein; Reviewed
 1-428 1.12e-75

hypothetical protein; Reviewed


Pssm-ID: 237015 [Multi-domain]  Cd Length: 327  Bit Score: 238.81  E-value: 1.12e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707   1 MDEFKPEDELKPDPSDRRtgrsrqssersertergepqinfddielddtddrrptraqkarneepeieeeidesedetvd 80
Cdd:PRK11901    1 MDEFKPEDELKPDTSDRR-------------------------------------------------------------- 18

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  81 eervERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPS---TSSSDQTASGEKSIDLAG----------- 146
Cdd:PRK11901   19 ----PTRSRKSSNGPKLAVSRQHMMIGIGILVLLLLIIAIGSALKSPTeheSQQSSNNAGAEKNIDLSGssslssgnqss 94

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 147 NATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQN---QQQLNNVAVNSTL 223
Cdd:PRK11901   95 PSAANNTSDGHDASGVKNTAPPQDISAPPISPTPTQAAPPQTPNGQQRIELPGNISDALSQQQGqvnAASQNAQGNTSTL 174

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 224 PTEPATVAPVRngnasrdtaktqtaerpattrparqqaviepKKPQATVKTEPKPVAQTPKRTEPAApvASTKAPAATST 303
Cdd:PRK11901  175 PTAPATVAPSK-------------------------------GAKVPATAETHPTPPQKPATKKPAV--NHHKTATVAVP 221

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 304 PAPKetatTAPVQTASPAqttatpaaggktagnvGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQ 383
Cdd:PRK11901  222 PATS----GKPKSGAASA----------------RALSSAPASHYTLQLSSASRSDTLNAYAKKQNLSHYHVYETKRDGK 281

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 1617669707 384 PWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK 428
Cdd:PRK11901  282 PWYVLVSGNYASSAEAKRAIATLPAEVQAKKPWVKPVQQVQQDLK 326
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 223-428 2.63e-39

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 146.92  E-value: 2.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 223 LPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPA---APVASTKAPA 299
Cdd:COG3266   249 LIIGSALKAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAPAAAAAAAAPAeaaAPQPTAAKPV 328

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 300 ATSTPAPKETATTAPVQTASPAqttaTPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLK-NYVVYET 378
Cdd:COG3266   329 VTETAAPAAPAPEAAAAAAAPA----APAVAKKLAADEQWLASQPASHYTLQLLGASSEAALEAFAAKHSLKgNLWVYPT 404

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1617669707 379 TRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK 428
Cdd:COG3266   405 TRNGKPWYVVVYGSYASRAEAKAAVAALPAELRASKPWVRSIAQVQQELK 454
SPOR pfam05036
SPOR domain; Bacterial SPOR domains bind peptidoglycan (PG) and target proteins to the cell ...
 344-419 1.22e-09

SPOR domain; Bacterial SPOR domains bind peptidoglycan (PG) and target proteins to the cell division site by binding to denuded glycan strands that lack stem peptides. This 70 residue domain is composed of two 35 residue repeats found in proteins involved in sporulation and cell division such as FtsN, DedD, and CwlM. This domain is involved in binding peptidoglycan. Two tandem repeats fold into a pseudo-2-fold symmetric single-domain structure containing numerous contacts between the repeats. FtsN is an essential cell division protein with a simple bitopic topology, a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. These repeats lay at the periplasmic C-terminus. FtsN localizes to the septum ring complex.


Pssm-ID: 461531 [Multi-domain]  Cd Length: 76  Bit Score: 54.29  E-value: 1.22e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1617669707 344 PSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVY-ETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQaKNPWAKP 419
Cdd:pfam05036   1 ASGGYYVQLGAFSNEANAEALAAKLRAKGFAAYvAVTSKGGGLYRVRVGPFASREEARAALKKLKALAG-LSPFVVK 76
DedD COG3147
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ...
 268-406 2.28e-06

Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442381 [Multi-domain]  Cd Length: 140  Bit Score: 47.08  E-value: 2.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 268 PQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPK-ETATTAPVQTASPAQTTATPAAGGktagnvgslksapss 346
Cdd:COG3147     1 PAEEAAAAPAAAAAPAAPAAAAAPAPAAAAAAAAPKPAAKpAAPKPAAAAAAAPAAKAAAPAGGG--------------- 65

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1617669707 347 hYTLQLSSSSNYDNLNGWAKKENLKNYVVY--ETTRNGQPWYVLVSGVYASKEEAKKAVSTL 406
Cdd:COG3147    66 -WVVQLGAFSNEDNAKELVAKLRAAGYPAYtePVTTGGGTLYRVRVGPFASRAEAEAALAKL 126
FtsN COG3087
Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning];
238-406 1.69e-05

Cell division protein FtsN [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442321 [Multi-domain]  Cd Length: 198  Bit Score: 45.39  E-value: 1.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 238 ASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQT 317
Cdd:COG3087    15 LLLELSAEAAAAASDNLRLAAGSAAAPALAEDALVASAAKAGLAETGAKAGAILAAAALAALNAAAAALAAASAAAAAAA 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 318 ASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVY--ETTRNGQPWYVLVSGVYAS 395
Cdd:COG3087    95 APAAAAAEAAAAPAGMAKKEAAAAPAAKKPYYVQVGAFRSRANAERLRARLALLGLEARvvEVEVGGGTWYRVRVGPFSS 174

                         170
                  ....*....|.
gi 1617669707 396 KEEAKKAVSTL 406
Cdd:COG3087   175 RAEAEKAREKL 185
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 251-336 2.02e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.19  E-value: 2.02e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  251 PATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPV--ASTKAPAATSTPAPKETATTAPVQTASPAQTTATPA 328
Cdd:PRK12270    43 APTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPkpAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRG 122


                   ....*...
gi 1617669707  329 AGGKTAGN 336
Cdd:PRK12270   123 AAAAVAKN 130
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 252-331 9.66e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 44.88  E-value: 9.66e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  252 ATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGG 331
Cdd:PRK12270    34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
PHA03247 PHA03247
large tegument protein UL36; Provisional
 157-335 1.67e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 1.67e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  157 PAPGTTSAENTQQDVSLPPISSTPTQGQTP-AATDGQQRVEVQGD----------LNNALTQPQNQQQLNNVAVNSTLPT 225
Cdd:PHA03247  2656 PAPGRVSRPRRARRLGRAAQASSPPQRPRRrAARPTVGSLTSLADpppppptpepAPHALVSATPLPPGPAAARQASPAL 2735

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  226 EPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPA 305
Cdd:PHA03247  2736 PAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPA 2815

                          170       180       190
                   ....*....|....*....|....*....|
gi 1617669707  306 PKETATTAPVqTASPAQTTATPAAGGKTAG 335
Cdd:PHA03247  2816 AALPPAASPA-GPLPPPTSAQPTAPPPPPG 2844
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 268-344 1.72e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 44.11  E-value: 1.72e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1617669707  268 PQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAP 344
Cdd:PRK12270    48 AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124
PHA03247 PHA03247
large tegument protein UL36; Provisional
 125-329 6.36e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.23  E-value: 6.36e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  125 KAPSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAEN-TQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNN 203
Cdd:PHA03247  2672 RAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHaLVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATP 2751

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  204 ALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTP 283
Cdd:PHA03247  2752 GGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPP 2831

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1617669707  284 KRTEPAAPvASTKAPAATSTPAPKETATTAPVQTASPAQTT-ATPAA 329
Cdd:PHA03247  2832 TSAQPTAP-PPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPaAKPAA 2877
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
242-333 6.93e-04

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 42.15  E-value: 6.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 242 TAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKET-ATTAPVQTASP 320
Cdd:PRK11907   21 SNPKLAQAEEIVTTTPATSTEAEQTTPVESDATEEADNTETPVAATTAAEAPSSSETAETSDPTSEATdTTTSEARTVTP 100

                          90
                  ....*....|...
gi 1617669707 321 AQTTATPAAGGKT 333
Cdd:PRK11907  101 AATETSKPVEGQT 113
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 159-329 8.31e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 41.77  E-value: 8.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 159 PGTTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQgdlnnaltqpqnqqqlnnVAVNSTLPTEPATVAPVRNGNA 238
Cdd:PRK07994  361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVP------------------PPPASAPQQAPAVPLPETTSQL 422

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 239 SrdtaktqtaerPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTA 318
Cdd:PRK07994  423 L-----------AARQQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKK 491

                         170
                  ....*....|.
gi 1617669707 319 SPAqttATPAA 329
Cdd:PRK07994  492 EPV---ATPKA 499
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
156-334 8.59e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.76  E-value: 8.59e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 156 QPAPGTTSAENTQQDVSLPPI--SSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPV 233
Cdd:PRK07003  359 EPAVTGGGAPGGGVPARVAGAvpAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 234 RNGNASRDTAKTQTAERPATTRPARQQAVIEPkKPQATVKTEPKPVAQTPKRTEPAAP-----------VASTKAPAATS 302
Cdd:PRK07003  439 GDDAADGDAPVPAKANARASADSRCDERDAQP-PADSGSASAPASDAPPDAAFEPAPRaaapsaatpaaVPDARAPAAAS 517

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1617669707 303 TPAPKETATTAPVQTASPAQTTATPA--AGGKTA 334
Cdd:PRK07003  518 REDAPAAAAPPAPEARPPTPAAAAPAarAGGAAA 551
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
224-344 1.04e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.37  E-value: 1.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 224 PTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATST 303
Cdd:PRK07003  368 PGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDA 447

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1617669707 304 PAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAP 344
Cdd:PRK07003  448 PVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDA 488
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 222-340 1.08e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 41.33  E-value: 1.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 222 TLPTEPATVAPVRNGNASRDTAKTqTAERPATTRPARqqAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAAT 301
Cdd:PRK14950  348 QLPLELAVIEALLVPVPAPQPAKP-TAAAPSPVRPTP--APSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHT 424

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1617669707 302 STPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSL 340
Cdd:PRK14950  425 PESAPKLTRAAIPVDEKPKYTPPAPPKEEEKALIADGDV 463
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 261-323 1.15e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.82  E-value: 1.15e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1617669707 261 AVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQT 323
Cdd:PTZ00144  128 APAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 261-334 1.26e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 40.82  E-value: 1.26e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1617669707 261 AVIEPKKPQATVKTEPKPVAQTPKrtEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA 334
Cdd:PTZ00144  107 DTVEVGAPLSEIDTGGAPPAAAPA--AAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPP 178
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 251-346 1.38e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 1.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 251 PATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAG 330
Cdd:PRK07764  394 PAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAA 473

                          90
                  ....*....|....*.
gi 1617669707 331 GKTAGNVGSLKSAPSS 346
Cdd:PRK07764  474 PEPTAAPAPAPPAAPA 489
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
224-329 1.56e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.01  E-value: 1.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 224 PTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATST 303
Cdd:PRK12323  376 TAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPA 455

                          90       100
                  ....*....|....*....|....*.
gi 1617669707 304 PAPKETATTAPVQTASPAQTTATPAA 329
Cdd:PRK12323  456 AAPAAAARPAAAGPRPVAAAAAAAPA 481
pylS PRK09537
pyrrolysine--tRNA(Pyl) ligase;
253-325 1.84e-03

pyrrolysine--tRNA(Pyl) ligase;


Pssm-ID: 236555 [Multi-domain]  Cd Length: 417  Bit Score: 40.21  E-value: 1.84e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1617669707 253 TTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPvasTKAPAATSTPAPKETATTAPVQTASPAQTTA 325
Cdd:PRK09537   86 TFEDKTQVKVKVVSAPTKKKKAMPKSVVRAPKPLENPVP---AQAESSGSKPVPSIPVSTPEVKAPAPALTPS 155
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 267-354 1.94e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.47  E-value: 1.94e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 267 KPQATVKTEPKPVAQTPKRTEP----AAPVASTKAPAATSTPAPKET-ATTAPVQTASPAQTTATPAAGGKTAGNVGSLK 341
Cdd:PRK14951  365 KPAAAAEAAAPAEKKTPARPEAaapaAAPVAQAAAAPAPAAAPAAAAsAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                          90
                  ....*....|...
gi 1617669707 342 SAPSSHYTLQLSS 354
Cdd:PRK14951  445 VALAPAPPAQAAP 457
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 221-326 2.11e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 40.64  E-value: 2.11e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  221 STLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAviepkkpqatvKTEPKPVAQTPKRTEPAAPVASTKAPAA 300
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAP-----------AAPPKPAAAAAAAAAPAAPPAAAAAAAP 108

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1617669707  301 TSTPAPKET-------ATTAPVQTASPAQTTAT 326
Cdd:PRK12270   109 AAAAVEDEVtplrgaaAAVAKNMDASLEVPTAT 141
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 267-334 2.30e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 40.26  E-value: 2.30e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1617669707  267 KPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA 334
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAA 104
PRK13808 PRK13808
adenylate kinase; Provisional
 204-334 2.76e-03

adenylate kinase; Provisional


Pssm-ID: 172341 [Multi-domain]  Cd Length: 333  Bit Score: 39.49  E-value: 2.76e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 204 ALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATtRPARQQAVIEPKKPQATVKTEPKPVAQTP 283
Cdd:PRK13808  193 AVGAANAKKAAKTPAAKSGAKKASAKAKSAAKKVSKKKAAKTAVSAKKAA-KTAAKAAKKAKKTAKKALKKAAKAVKKAA 271

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1617669707 284 KRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA 334
Cdd:PRK13808  272 KKAAKAAAKAAKGAAKATKGKAKAKKKAGKKAAAGSKAKATAKAPKRGAKG 322
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 218-351 2.92e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.97  E-value: 2.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 218 AVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKA 297
Cdd:PRK07764  380 RLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA 459

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1617669707 298 PAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSHYTLQ 351
Cdd:PRK07764  460 AAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLR 513
PRK11633 PRK11633
cell division protein DedD; Provisional
 218-318 2.98e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 38.83  E-value: 2.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 218 AVNSTLPTEP--ATVAPVRNGNASrdtaktqtaerPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVAST 295
Cdd:PRK11633   58 AATQALPTQPpeGAAEAVRAGDAA-----------APSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVE 126

                          90       100
                  ....*....|....*....|...
gi 1617669707 296 KAPAATSTPAPKETATTAPVQTA 318
Cdd:PRK11633  127 APPAPKPEPKPVVEEKAAPTGKA 149
PRK10856 PRK10856
cytoskeleton protein RodZ;
241-329 4.48e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 38.85  E-value: 4.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 241 DTAKTQTAERPATTRPARQQAVIEPkkpQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASP 320
Cdd:PRK10856  168 TTTDPATTPAPAAPVDTTPTNSQTP---AVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGV 244


                  ....*....
gi 1617669707 321 AQTTATPAA 329
Cdd:PRK10856  245 STPAADPNA 253
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
223-346 4.91e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.45  E-value: 4.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 223 LPTEPATV---APVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPA 299
Cdd:PRK07003  356 LAFEPAVTgggAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPAT 435

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1617669707 300 ATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSS 346
Cdd:PRK07003  436 ADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPAS 482
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 218-335 5.21e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 38.93  E-value: 5.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 218 AVNSTLPTEPATVA-PVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPkPVAQTPKRTEPAAPVASTK 296
Cdd:PRK14951  369 AAEAAAPAEKKTPArPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAA-PAAAAPAAAPAAAPAAVAL 447

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1617669707 297 APAATSTPAPKETATTAPVQtASPAQTTATPAAGGKTAG 335
Cdd:PRK14951  448 APAPPAQAAPETVAIPVRVA-PEPAVASAAPAPAAAPAA 485
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 217-335 5.88e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.20  E-value: 5.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 217 VAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTK 296
Cdd:PRK07764  387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQP 466

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1617669707 297 APAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAG 335
Cdd:PRK07764  467 APAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAG 505
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 268-349 7.36e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 38.72  E-value: 7.36e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  268 PQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPkeTATTAPVQTASPAQTTATPAAGGKTAGNVGSLKSAPSSH 347
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAA--AAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116


                   ..
gi 1617669707  348 YT 349
Cdd:PRK12270   117 VT 118
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
235-346 8.02e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 38.70  E-value: 8.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 235 NGNASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPK--PVAQTPKRTEPAAPVASTKAPAATSTPAPKETATT 312
Cdd:PRK12323  369 GGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAaaAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1617669707 313 APVQTASPAQTTATPAAGGKTAGNVGSLKSAPSS 346
Cdd:PRK12323  449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPAR 482
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 238-326 9.61e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 38.33  E-value: 9.61e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707  238 ASRDTAKTQTAERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQT 317
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118

                           90
                   ....*....|.
gi 1617669707  318 A--SPAQTTAT 326
Cdd:PRK12270   119 PlrGAAAAVAK 129
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
126-339 9.79e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 38.20  E-value: 9.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 126 APSTSSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVqgdLNNAL 205
Cdd:COG3469    13 GGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATA---AAAAA 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 206 TQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQtaerpATTRPARQQAVIEpkkpqATVKTEPKPVAQTPKR 285
Cdd:COG3469    90 TSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTA-----GSTTTSGASATSS-----AGSTTTTTTVSGTETA 159

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1617669707 286 TEPAAPVASTKAPAATST-PAPKETATTAPVQTASPAQTTATPAAGGKTAGNVGS 339
Cdd:COG3469   160 TGGTTTTSTTTTTTSASTtPSATTTATATTASGATTPSATTTATTTGPPTPGLPK 214
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 248-329 9.98e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 38.16  E-value: 9.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1617669707 248 AERPATTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATP 327
Cdd:PRK14951  363 AFKPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442


                  ..
gi 1617669707 328 AA 329
Cdd:PRK14951  443 AA 444
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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