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Conserved domains on  [gi|1618258814|dbj|GCR04663|]
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anaerobic allantoin catabolic oxamate carbamoyltransferase [Escherichia coli]

Protein Classification

DUF2877 domain-containing protein( domain architecture ID 10568447)

DUF2877 domain-containing protein similar to Escherichia coli YahE and YlbF proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2877 pfam11392
Protein of unknown function (DUF2877); This bacterial family of proteins are putative ...
 158-264 1.63e-39

Protein of unknown function (DUF2877); This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.


:

Pssm-ID: 431864  Cd Length: 109  Bit Score: 133.12  E-value: 1.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1618258814 158 WLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALS--CP 235
Cdd:pfam11392   1 LIGLGPGLTPSGDDFLVGLLAALRLLGQPAAAALRAALARVLAALGRTTDISAAYLRHAARGRFSEPLLALLRALSsgDP 80

                          90       100
                  ....*....|....*....|....*....
gi 1618258814 236 KRTAVAIDSLLALGHTSGADTLLGFWLGQ 264
Cdd:pfam11392  81 EELAKAIDRLLAIGHTSGTDTLLGLLLGL 109
 
Name Accession Description Interval E-value
DUF2877 pfam11392
Protein of unknown function (DUF2877); This bacterial family of proteins are putative ...
 158-264 1.63e-39

Protein of unknown function (DUF2877); This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.


Pssm-ID: 431864  Cd Length: 109  Bit Score: 133.12  E-value: 1.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1618258814 158 WLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALS--CP 235
Cdd:pfam11392   1 LIGLGPGLTPSGDDFLVGLLAALRLLGQPAAAALRAALARVLAALGRTTDISAAYLRHAARGRFSEPLLALLRALSsgDP 80

                          90       100
                  ....*....|....*....|....*....
gi 1618258814 236 KRTAVAIDSLLALGHTSGADTLLGFWLGQ 264
Cdd:pfam11392  81 EELAKAIDRLLAIGHTSGTDTLLGLLLGL 109
 
Name Accession Description Interval E-value
DUF2877 pfam11392
Protein of unknown function (DUF2877); This bacterial family of proteins are putative ...
 158-264 1.63e-39

Protein of unknown function (DUF2877); This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.


Pssm-ID: 431864  Cd Length: 109  Bit Score: 133.12  E-value: 1.63e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1618258814 158 WLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALS--CP 235
Cdd:pfam11392   1 LIGLGPGLTPSGDDFLVGLLAALRLLGQPAAAALRAALARVLAALGRTTDISAAYLRHAARGRFSEPLLALLRALSsgDP 80

                          90       100
                  ....*....|....*....|....*....
gi 1618258814 236 KRTAVAIDSLLALGHTSGADTLLGFWLGQ 264
Cdd:pfam11392  81 EELAKAIDRLLAIGHTSGTDTLLGLLLGL 109
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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