|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
17-1136 |
4.90e-142 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 459.73 E-value: 4.90e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 17 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYIS-LLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIMQ 95
Cdd:PLN03210 13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 96 RRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKifNGDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKN 175
Cdd:PLN03210 93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ--NKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 176 TFRMLNeLSPCVIPDDLPGIESRSKELEKLLMFDNDEcVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDI---- 251
Cdd:PLN03210 171 VLGKLN-LTPSNDFEDFVGIEDHIAKMSSLLHLESEE-VRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAfisk 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 252 ------EDNSKRYGLP-YLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRIV 324
Cdd:PLN03210 249 smeiysSANPDDYNMKlHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRII 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 325 IITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWK 403
Cdd:PLN03210 329 VITKDKHFLRAHGiDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWM 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 404 KKLEFLQVNPDKELQKELKSSYKALDDDQ-KSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRI 482
Cdd:PLN03210 409 DMLPRLRNGLDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIV 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 483 EMHDLLHAMGKEIGKEKSiRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKFLKFHS 562
Cdd:PLN03210 489 EMHSLLQEMGKEIVRAQS-NEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYT 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 563 SHCSQwcDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSK 642
Cdd:PLN03210 568 KKWDQ--KKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSK 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 643 DLLNLSGLSRAKNLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISE 721
Cdd:PLN03210 646 NLKEIPDLSMATNLETLKLSDCSSLvELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDIST 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 722 SIESLHLEGTAIERVVE--HIESLHSLILLNLKNcEKLKYLPNDLYKL-----KSLQELVLSGCSALESLPpikekmecl 794
Cdd:PLN03210 726 NISWLDLDETAIEEFPSnlRLENLDELILCEMKS-EKLWERVQPLTPLmtmlsPSLTRLFLSDIPSLVELP--------- 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 795 eillmdgTSIKQTPEMSCLSnlkicsfcrpvIDDSTGLVVLPFSGN-SFLSDLYLTNCN-IDKLPDKFSSLRSLRclcLS 872
Cdd:PLN03210 796 -------SSIQNLHKLEHLE-----------IENCINLETLPTGINlESLESLDLSGCSrLRTFPDISTNISDLN---LS 854
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 873 RNNIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYL---DAHGCGSLENVS---KPLTIPLVTERMHTTF----- 941
Cdd:PLN03210 855 RTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLetvDFSDCGALTEASwngSPSEVAMATDNIHSKLpstvc 934
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 942 -IFTDCFKLNQaekEDIVAQAQLKSQLLartsrhhnhkgllldplvavcFPGHDIPSWFSHQKMGSLIETDLLPH--WCN 1018
Cdd:PLN03210 935 iNFINCFNLDQ---EALLQQQSIFKQLI---------------------LSGEEVPSYFTHRTTGASLTNIPLLHisPCQ 990
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 1019 SKFIGASlCVVVTFkDHEGHHANRLSVRCKSKFKSQNGQFISFSFCLGGWNEScgsscheprKLGSdHVFISynNCNVPV 1098
Cdd:PLN03210 991 PFFRFRA-CAVVDS-ESFFIISVSFDIQVCCRFIDRLGNHFDSPYQPHVFSVT---------KKGS-HLVIF--DCCFPL 1056
|
1130 1140 1150
....*....|....*....|....*....|....*....
gi 1407892593 1099 FKWSEETNEGNRCHptsASFEFYLTDET-ERKLECCEIL 1136
Cdd:PLN03210 1057 NEDNAPLAELNYDH---VDIQFRLTNKNsQLKLKGCGIR 1092
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
17-181 |
2.56e-38 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 140.96 E-value: 2.56e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 17 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAK--LRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 94
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdlEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 95 QRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFngDEQKIEELKVALKTASNIRGFVYPENSSEpdFLDEIVK 174
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVL--TEEKVLKWRGALNEVANIWHSKSVSDESK--FWKKIAY 156
|
....*..
gi 1407892593 175 NTFRMLN 181
Cdd:pfam01582 157 DISNKLN 163
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
16-154 |
3.90e-37 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 136.30 E-value: 3.90e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 16 EFDVFVSFRGA-DTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 94
Cdd:smart00255 1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1407892593 95 QRRKEF-NHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFNGDEQKiEELKVALKTASNI 154
Cdd:smart00255 81 ENALEEgGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKE-QFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
608-879 |
1.06e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.16 E-value: 1.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 608 KELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLdllgsvKQMNELIYLNLRDc 687
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSG- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 688 TSLESLPKGF-KIKSLKTLILSGClKLKDfhiISESI------ESLHLEGTAIERVVEHIESLHSLILLNLKNCeKLKYL 760
Cdd:COG4886 123 NQLTDLPEELaNLTNLKELDLSNN-QLTD---LPEPLgnltnlKSLDLSNNQLTDLPEELGNLTNLKELDLSNN-QITDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 761 PNDLYKLKSLQELVLSGCsALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKIcsfcrpviddstglvvlpfsgn 840
Cdd:COG4886 198 PEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEE---------------------- 254
|
250 260 270
....*....|....*....|....*....|....*....
gi 1407892593 841 sflsdLYLTNCNIDKLPdKFSSLRSLRCLCLSRNNIETL 879
Cdd:COG4886 255 -----LDLSNNQLTDLP-PLANLTNLKTLDLSNNQLTDL 287
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
17-1136 |
4.90e-142 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 459.73 E-value: 4.90e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 17 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYIS-LLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIMQ 95
Cdd:PLN03210 13 YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDpELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIVR 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 96 RRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKifNGDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKN 175
Cdd:PLN03210 93 CKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQ--NKTEDEKIQWKQALTDVANILGYHSQNWPNEAKMIEEIAND 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 176 TFRMLNeLSPCVIPDDLPGIESRSKELEKLLMFDNDEcVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDI---- 251
Cdd:PLN03210 171 VLGKLN-LTPSNDFEDFVGIEDHIAKMSSLLHLESEE-VRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFIDRAfisk 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 252 ------EDNSKRYGLP-YLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRIV 324
Cdd:PLN03210 249 smeiysSANPDDYNMKlHLQRAFLSEILDKKDIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGSGSRII 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 325 IITRDKKLLQKNA-DATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWK 403
Cdd:PLN03210 329 VITKDKHFLRAHGiDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWM 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 404 KKLEFLQVNPDKELQKELKSSYKALDDDQ-KSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRI 482
Cdd:PLN03210 409 DMLPRLRNGLDGKIEKTLRVSYDGLNNKKdKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIV 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 483 EMHDLLHAMGKEIGKEKSiRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKFLKFHS 562
Cdd:PLN03210 489 EMHSLLQEMGKEIVRAQS-NEPGEREFLVDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYT 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 563 SHCSQwcDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSK 642
Cdd:PLN03210 568 KKWDQ--KKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSK 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 643 DLLNLSGLSRAKNLERLDLEGCTSL-DLLGSVKQMNELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISE 721
Cdd:PLN03210 646 NLKEIPDLSMATNLETLKLSDCSSLvELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDIST 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 722 SIESLHLEGTAIERVVE--HIESLHSLILLNLKNcEKLKYLPNDLYKL-----KSLQELVLSGCSALESLPpikekmecl 794
Cdd:PLN03210 726 NISWLDLDETAIEEFPSnlRLENLDELILCEMKS-EKLWERVQPLTPLmtmlsPSLTRLFLSDIPSLVELP--------- 795
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 795 eillmdgTSIKQTPEMSCLSnlkicsfcrpvIDDSTGLVVLPFSGN-SFLSDLYLTNCN-IDKLPDKFSSLRSLRclcLS 872
Cdd:PLN03210 796 -------SSIQNLHKLEHLE-----------IENCINLETLPTGINlESLESLDLSGCSrLRTFPDISTNISDLN---LS 854
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 873 RNNIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYL---DAHGCGSLENVS---KPLTIPLVTERMHTTF----- 941
Cdd:PLN03210 855 RTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLetvDFSDCGALTEASwngSPSEVAMATDNIHSKLpstvc 934
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 942 -IFTDCFKLNQaekEDIVAQAQLKSQLLartsrhhnhkgllldplvavcFPGHDIPSWFSHQKMGSLIETDLLPH--WCN 1018
Cdd:PLN03210 935 iNFINCFNLDQ---EALLQQQSIFKQLI---------------------LSGEEVPSYFTHRTTGASLTNIPLLHisPCQ 990
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 1019 SKFIGASlCVVVTFkDHEGHHANRLSVRCKSKFKSQNGQFISFSFCLGGWNEScgsscheprKLGSdHVFISynNCNVPV 1098
Cdd:PLN03210 991 PFFRFRA-CAVVDS-ESFFIISVSFDIQVCCRFIDRLGNHFDSPYQPHVFSVT---------KKGS-HLVIF--DCCFPL 1056
|
1130 1140 1150
....*....|....*....|....*....|....*....
gi 1407892593 1099 FKWSEETNEGNRCHptsASFEFYLTDET-ERKLECCEIL 1136
Cdd:PLN03210 1057 NEDNAPLAELNYDH---VDIQFRLTNKNsQLKLKGCGIR 1092
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
17-181 |
2.56e-38 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 140.96 E-value: 2.56e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 17 FDVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAK--LRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 94
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdlEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 95 QRRKEFNHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFngDEQKIEELKVALKTASNIRGFVYPENSSEpdFLDEIVK 174
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVL--TEEKVLKWRGALNEVANIWHSKSVSDESK--FWKKIAY 156
|
....*..
gi 1407892593 175 NTFRMLN 181
Cdd:pfam01582 157 DISNKLN 163
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
16-154 |
3.90e-37 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 136.30 E-value: 3.90e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 16 EFDVFVSFRGA-DTRHDFTSHLVKYLRGKGIDVFSDAKLRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGKIM 94
Cdd:smart00255 1 EYDVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1407892593 95 QRRKEF-NHGVLPIFYKVSKSDVSNQTGSFEAVFQSPTKIFNGDEQKiEELKVALKTASNI 154
Cdd:smart00255 81 ENALEEgGLRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEKE-QFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
608-879 |
1.06e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 96.16 E-value: 1.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 608 KELVDLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLdllgsvKQMNELIYLNLRDc 687
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSG- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 688 TSLESLPKGF-KIKSLKTLILSGClKLKDfhiISESI------ESLHLEGTAIERVVEHIESLHSLILLNLKNCeKLKYL 760
Cdd:COG4886 123 NQLTDLPEELaNLTNLKELDLSNN-QLTD---LPEPLgnltnlKSLDLSNNQLTDLPEELGNLTNLKELDLSNN-QITDL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 761 PNDLYKLKSLQELVLSGCsALESLPPIKEKMECLEILLMDGTSIKQTPEMSCLSNLKIcsfcrpviddstglvvlpfsgn 840
Cdd:COG4886 198 PEPLGNLTNLEELDLSGN-QLTDLPEPLANLTNLETLDLSNNQLTDLPELGNLTNLEE---------------------- 254
|
250 260 270
....*....|....*....|....*....|....*....
gi 1407892593 841 sflsdLYLTNCNIDKLPdKFSSLRSLRCLCLSRNNIETL 879
Cdd:COG4886 255 -----LDLSNNQLTDLP-PLANLTNLKTLDLSNNQLTDL 287
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
630-917 |
3.50e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.13 E-value: 3.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 630 TESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGFKI---KSLKTLI 706
Cdd:COG4886 23 TLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLgdlTNLTELD 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 707 LSGCLKLKDFhiisESIESLHLEGTAIERVVEHIESLHSLILLNLKNCeKLKYLPNDLYKLKSLQELVLSGCSaLESLPP 786
Cdd:COG4886 103 LSGNEELSNL----TNLESLDLSGNQLTDLPEELANLTNLKELDLSNN-QLTDLPEPLGNLTNLKSLDLSNNQ-LTDLPE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 787 ikekmecleillmdgtsikqtpEMSCLSNLKIcsfcrpviddstglvvlpfsgnsflsdLYLTNCNIDKLPDKFSSLRSL 866
Cdd:COG4886 177 ----------------------ELGNLTNLKE---------------------------LDLSNNQITDLPEPLGNLTNL 207
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1407892593 867 RCLCLSRNNIETLPESIEKLYSLLLLDLKHcCRLKSLPLLP--SNLQYLDAHG 917
Cdd:COG4886 208 EELDLSGNQLTDLPEPLANLTNLETLDLSN-NQLTDLPELGnlTNLEELDLSN 259
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
19-109 |
1.60e-12 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 65.41 E-value: 1.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 19 VFVSFRGADtrHDFTSHLVKYLRGKGIDVFSDAK--LRGGEYISLLFDRIEQSKMSIVVFSEDYANSWWCLEEVGkIMQR 96
Cdd:pfam13676 1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRWdiRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWE-AALA 77
|
90
....*....|...
gi 1407892593 97 RKEFNHGVLPIFY 109
Cdd:pfam13676 78 DPEGRKRLIPVRL 90
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
198-428 |
1.25e-11 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 66.25 E-value: 1.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 198 RSKELEKLL--MFDNDEcVRVVGVLGMTGIGKTTVADIVYKQNFQ---RFDGYEFLEDiednSKRYGLPYLYQ---KLLH 269
Cdd:pfam00931 1 REDMVEKVIgkLSEKDE-PGIVGIHGMGGVGKTTLAAQIFNDFDEvegHFDSVAWVVV----SKTFTISTLQQtilQNLG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 270 KLLDGENV--DVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKNVYRQGSRIVIITRDKKlLQKNADATYVVPR-- 345
Cdd:pfam00931 76 LSEDDWDNkeEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEE-VAGRVGGPSDPHEve 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 346 -LNDREAMELFCLQVF-GNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLT-HDINYWKKKLEFLQVNPdKELQKELK 422
Cdd:pfam00931 155 lLEPDEAWELFENKVFpKTLGECELLEDVAKEIVEKCRGLPLALKVLGGLLSCkKTVEEWKHVYDVLQSEL-KSNSYSLN 233
|
....*.
gi 1407892593 423 SSYKAL 428
Cdd:pfam00931 234 SVRSIL 239
|
|
| C-JID |
pfam20160 |
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ... |
990-1087 |
7.09e-11 |
|
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.
Pssm-ID: 466313 Cd Length: 108 Bit Score: 60.15 E-value: 7.09e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 990 FPGHDIPSWFSHQKMGSLIETDLLPHWCNSKFIGASLCVVVTFKDHEGHHANR----------LSVRCKSKFKSQNGQF- 1058
Cdd:pfam20160 1 LPGSQIPEWFNHQSTGSSISIKLPENWYNDNFLGFAVCAVGSLIPSLHNFLGYihffliplvsLWDTSKANGKTPNDYGr 80
|
90 100
....*....|....*....|....*....
gi 1407892593 1059 ISFSFClggwnesCGSSCHEPRKLGSDHV 1087
Cdd:pfam20160 81 IEASFE-------FPSDLHEIKQCGVRLI 102
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
18-116 |
1.34e-08 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 55.98 E-value: 1.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 18 DVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAK-LRGGEYislLFDRIE----QSKMSIVVFSEDYANSWWCLEEVGK 92
Cdd:PLN03194 28 DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKnMKPGDK---LFDKINsairNCKVGVAVFSPRYCESYFCLHELAL 104
|
90 100
....*....|....*....|....
gi 1407892593 93 IMQRRKEfnhgVLPIFYKVSKSDV 116
Cdd:PLN03194 105 IMESKKR----VIPIFCDVKPSQL 124
|
|
| COG4916 |
COG4916 |
Uncharacterized conserved protein [Function unknown]; |
17-109 |
5.08e-08 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 443944 [Multi-domain] Cd Length: 236 Bit Score: 55.12 E-value: 5.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 17 FDVFVSFRGADtRHdFTSHLVKYLRGKGIDVFSD----AKLRGGEyISLLFDRI--EQSKMSIVVFSEDYANSWWCLEE- 89
Cdd:COG4916 1 YDVALSFAGED-RE-FVERVAEALKARGIKVFYDeneeAELWGKD-LDEYLQDIyrSESRFVVVFLSKDYVEKKWTGLEr 77
|
90 100
....*....|....*....|...
gi 1407892593 90 ---VGKIMQRRKEFnhgVLPIFY 109
Cdd:COG4916 78 raaLARAMQRKKEY---ILPIRL 97
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
740-928 |
7.12e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 49.93 E-value: 7.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 740 IESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTpemscLSNLKIC 819
Cdd:COG4886 11 KLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLS-----LLLLSLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 820 SFCRPVIDDSTGLVVLPFSGNSFLSD------LYLTNCNIDKLPDKFSSLRSLRCLCLSRNNIETLPESieklyslllld 893
Cdd:COG4886 86 LLGLTDLGDLTNLTELDLSGNEELSNltnlesLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEP----------- 154
|
170 180 190
....*....|....*....|....*....|....*
gi 1407892593 894 lkhccrLKSLPllpsNLQYLDAHGCGsLENVSKPL 928
Cdd:COG4886 155 ------LGNLT----NLKSLDLSNNQ-LTDLPEEL 178
|
|
| LRR_3 |
pfam07725 |
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ... |
610-628 |
5.45e-03 |
|
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.
Pssm-ID: 429621 [Multi-domain] Cd Length: 20 Bit Score: 35.39 E-value: 5.45e-03
|
| PRK15386 |
PRK15386 |
type III secretion effector GogB; |
739-866 |
5.81e-03 |
|
type III secretion effector GogB;
Pssm-ID: 237954 [Multi-domain] Cd Length: 426 Bit Score: 40.62 E-value: 5.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1407892593 739 HIESL----HSLILLNLKNCEKLKYLPNDL-YKLKSLQelvLSGCSALESLPPikeKMECLEILLMDGTSIKQTPE-MSC 812
Cdd:PRK15386 63 DIESLpvlpNELTEITIENCNNLTTLPGSIpEGLEKLT---VCHCPEISGLPE---SVRSLEIKGSATDSIKNVPNgLTS 136
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1407892593 813 LSNLKICSFCRPVIDDstglvVLPFSgnsfLSDLYLTNCNIDKLPDKF-SSLRSL 866
Cdd:PRK15386 137 LSINSYNPENQARIDN-----LISPS----LKTLSLTGCSNIILPEKLpESLQSI 182
|
|
| |
