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Conserved domains on  [gi|1384039590|sp|F4J7T6|]
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RecName: Full=Receptor-like protein 39; Short=AtRLP39; Flags: Precursor

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 150-812 2.00e-62

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.00e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 150 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 223
Cdd:PLN00113   21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 224 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 302
Cdd:PLN00113   95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 303 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 382
Cdd:PLN00113  174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 383 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 461
Cdd:PLN00113  238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 462 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN00113  306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 539 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 618
Cdd:PLN00113  365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 619 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 698
Cdd:PLN00113  445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 699 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 778
Cdd:PLN00113  496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                         650       660       670
                  ....*....|....*....|....*....|....
gi 1384039590 779 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 812
Cdd:PLN00113  576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
PLN03150 super family cl31977
hypothetical protein; Provisional
 85-164 8.55e-05

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PLN03150:

Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  85 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 164
Cdd:PLN03150  430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 150-812 2.00e-62

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.00e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 150 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 223
Cdd:PLN00113   21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 224 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 302
Cdd:PLN00113   95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 303 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 382
Cdd:PLN00113  174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 383 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 461
Cdd:PLN00113  238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 462 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN00113  306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 539 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 618
Cdd:PLN00113  365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 619 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 698
Cdd:PLN00113  445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 699 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 778
Cdd:PLN00113  496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                         650       660       670
                  ....*....|....*....|....*....|....
gi 1384039590 779 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 812
Cdd:PLN00113  576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
80-409 2.15e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 106.94  E-value: 2.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  80 RLRACLSGTLKSNSSLFQFHQLRHLYLSYNNFTpsSIPSEFGMLNKLEVLFMStGGFLGQVPSSFSNLSMLSALLLHHNE 159
Cdd:COG4886    94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLS-NNQLTDLPEPLGNLTNLKSLDLSNNQ 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 160 LTGSLSFVRNLRKLTILDVSHNHFSgtlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfgQVP 239
Cdd:COG4886   171 LTDLPEELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQL--TDL 243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 240 PTISNLTQLTELYLPLNDFTgSLPLVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSR 319
Cdd:COG4886   244 PELGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 320 LENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLL 399
Cdd:COG4886   323 LLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402

                         330
                  ....*....|
gi 1384039590 400 KHCNISVFPN 409
Cdd:COG4886   403 LTLALLDAVN 412
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 97-282 8.32e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.86  E-value: 8.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  97 QFHQLRHLYLsYNNFtpssipsefgmLNKLEVLfmstggflgqvpssfSNLSMLSALLLHHNELTgSLSFVRNLRKLTIL 176
Cdd:cd21340    22 LCKNLKVLYL-YDNK-----------ITKIENL---------------EFLTNLTHLYLQNNQIE-KIENLENLVNLKKL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 177 DVSHNHFS---GtLNPNSSLFELH------------------------NLAYLDLGSNNFTSSSlpyEFGNLNKLELLDV 229
Cdd:cd21340    74 YLGGNRISvveG-LENLTNLEELHienqrlppgekltfdprslaalsnSLRVLNISGNNIDSLE---PLAPLRNLEQLDA 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1384039590 230 SSNsffgqvppTISNLTQLTELylplndftgslplVQNLTKLSILHLSDNHFS 282
Cdd:cd21340   150 SNN--------QISDLEELLDL-------------LSSWPSLRELDLTGNPVC 181
PLN03150 PLN03150
hypothetical protein; Provisional
 85-164 8.55e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  85 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 164
Cdd:PLN03150  430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
LRR_8 pfam13855
Leucine rich repeat;
171-234 2.14e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.82  E-value: 2.14e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1384039590 171 RKLTILDVSHNHFSGTlnPNSSLFELHNLAYLDLGSNNFTSSSlPYEFGNLNKLELLDVSSNSF 234
Cdd:pfam13855   1 PNLRSLDLSNNRLTSL--DDGAFKGLSNLKVLDLSNNLLTTLS-PGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 150-812 2.00e-62

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.00e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 150 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 223
Cdd:PLN00113   21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 224 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 302
Cdd:PLN00113   95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 303 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 382
Cdd:PLN00113  174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 383 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 461
Cdd:PLN00113  238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 462 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN00113  306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 539 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 618
Cdd:PLN00113  365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 619 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 698
Cdd:PLN00113  445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 699 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 778
Cdd:PLN00113  496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                         650       660       670
                  ....*....|....*....|....*....|....
gi 1384039590 779 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 812
Cdd:PLN00113  576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 88-597 1.96e-35

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 145.38  E-value: 1.96e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  88 TLKSN-------SSLFQFHQLRHLYLSYNNFTpSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNEL 160
Cdd:PLN00113  194 TLASNqlvgqipRELGQMKSLKWIYLGYNNLS-GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL 272

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 161 TGSLsfvrnlrkltildvshnhfsgtlnPNsSLFELHNLAYLDLgSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPP 240
Cdd:PLN00113  273 SGPI------------------------PP-SIFSLQKLISLDL-SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPV 326

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 241 TISNLTQLTELYLPLNDFTGSLPlvQNLTK---LSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGsiEVPNS-SL 316
Cdd:PLN00113  327 ALTSLPRLQVLQLWSNKFSGEIP--KNLGKhnnLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG--EIPKSlGA 402

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 317 SSRLENLNLGENHFEGKIIEPISKlinlkelhlsflntsypinlklfsslkylllldlsggwisqaslsldsyipstlea 396
Cdd:PLN00113  403 CRSLRRVRLQDNSFSGELPSEFTK-------------------------------------------------------- 426

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 397 lllkhcnisvfpnilktLPNLEFIALSTNKISGKIPEWLWSLPrlssvfieenlftgfegsseilvnsSVRILNLLSNNL 476
Cdd:PLN00113  427 -----------------LPLVYFLDISNNNLQGRINSRKWDMP-------------------------SLQMLSLARNKF 464

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 477 EGALPHLPLSVNY--FSARNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIPPCPS---NFLILNLRKNNLEGSIPDTYY 551
Cdd:PLN00113  465 FGGLPDSFGSKRLenLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSsckKLVSLDLSHNQLSGQIPASFS 544

                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*.
gi 1384039590 552 ADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFS 597
Cdd:PLN00113  545 EMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
80-409 2.15e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 106.94  E-value: 2.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  80 RLRACLSGTLKSNSSLFQFHQLRHLYLSYNNFTpsSIPSEFGMLNKLEVLFMStGGFLGQVPSSFSNLSMLSALLLHHNE 159
Cdd:COG4886    94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLS-NNQLTDLPEPLGNLTNLKSLDLSNNQ 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 160 LTGSLSFVRNLRKLTILDVSHNHFSgtlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfgQVP 239
Cdd:COG4886   171 LTDLPEELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQL--TDL 243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 240 PTISNLTQLTELYLPLNDFTgSLPLVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSR 319
Cdd:COG4886   244 PELGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 320 LENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLL 399
Cdd:COG4886   323 LLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402

                         330
                  ....*....|
gi 1384039590 400 KHCNISVFPN 409
Cdd:COG4886   403 LTLALLDAVN 412
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
106-454 3.66e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 94.23  E-value: 3.66e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 106 LSYNNFTPSSIPSEFGMLNKLEVLFMSTggflgqvPSSFSNLSMLSALLLHHNELTGSLSFVRNLRKLTILDVSHNHFSg 185
Cdd:COG4886    78 SLLLLSLLLLGLTDLGDLTNLTELDLSG-------NEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT- 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 186 tlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfGQVPPTISNLTQLTELYLPLNDFTgSLPL- 264
Cdd:COG4886   150 --DLPEPLGNLTNLKSLDLSNNQLTD--LPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT-DLPEp 223

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 265 VQNLTKLSILHLSDNHFSgTIPSsLFTMPFLSYLDLGGNNLSgsiEVPNSSLSSRLENLNLGENHFEGKIIEPISKLINL 344
Cdd:COG4886   224 LANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT---DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGL 298

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 345 KELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLLKHCNISVFPNILKTLPNLEFIALST 424
Cdd:COG4886   299 NSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEAT 378

                         330       340       350
                  ....*....|....*....|....*....|
gi 1384039590 425 NKISGKIPEWLWSLPRLSSVFIEENLFTGF 454
Cdd:COG4886   379 LLTLALLLLTLLLLLLTTTAGVLLLTLALL 408
PLN03150 PLN03150
hypothetical protein; Provisional
 714-819 3.53e-18

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 89.49  E-value: 3.53e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 714 LEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAYMNVSHNQLNGEIPQ- 792
Cdd:PLN03150  430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAa 509

                          90       100
                  ....*....|....*....|....*...
gi 1384039590 793 -GTQITGQPKSSFEGNAGLCGLPLQESC 819
Cdd:PLN03150  510 lGGRLLHRASFNFTDNAGLCGIPGLRAC 537
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
106-495 1.21e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.98  E-value: 1.21e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 106 LSYNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSLSFVRNLRKLTILDVSHNHFSG 185
Cdd:COG4886     5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 186 TLNPNSSLFELHNLAYLDLGSNNftssslpyEFGNLNKLELLDVSSNSfFGQVPPTISNLTQLTELYLPLNDFTGSLPLV 265
Cdd:COG4886    85 LLLGLTDLGDLTNLTELDLSGNE--------ELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLTDLPEPL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 266 QNLTKLSILHLSDNHFSgTIPSSLFTMPFLSYLDLGGNNLSgSIEVPNSSLSSrLENLNLGENHFEgKIIEPISKLINLK 345
Cdd:COG4886   156 GNLTNLKSLDLSNNQLT-DLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTN-LEELDLSGNQLT-DLPEPLANLTNLE 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 346 ELHLSFLNTSYPINLKLFsslkylllldlsggwisqaslsldsyipSTLEALLLKHCNISVFPNiLKTLPNLEFIALSTN 425
Cdd:COG4886   232 TLDLSNNQLTDLPELGNL----------------------------TNLEELDLSNNQLTDLPP-LANLTNLKTLDLSNN 282

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 426 KISGKIPEWLWSLPRLSSVFIEENLFTGFEGSSEILVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNN 495
Cdd:COG4886   283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTL 352
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
449-845 7.79e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.87  E-value: 7.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 449 NLFTGFEGSSEILVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIppc 528
Cdd:COG4886    36 ALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNL--- 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 529 pSNFLILNLRKNNLEgSIPDTYYADAPLRSLDVGYNRLTgKLPRSLLNCSALQFLSVDHNGIKDtFPFSLKALPKLQVLI 608
Cdd:COG4886   113 -TNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELD 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 609 LHSNNFY---GPLSppnqgslGFPELRILEIAGNKFTgSLPPDFFEnwkassltmnedqglymvynkvvygtyyFTSLEA 685
Cdd:COG4886   189 LSNNQITdlpEPLG-------NLTNLEELDLSGNQLT-DLPEPLAN----------------------------LTNLET 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 686 IDLqykglsmeqnrvlsssatidfSGNRLEgEIPEsIGLLKALIALNLSNNAFTgHIPlSLANLKKIESLDLSSNQLSGT 765
Cdd:COG4886   233 LDL---------------------SNNQLT-DLPE-LGNLTNLEELDLSNNQLT-DLP-PLANLTNLKTLDLSNNQLTDL 287

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 766 IPNGIGTLSFLAYMNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCGLPLQESCFGTNAPPAQHPKEEEEEEEEEEQVLN 845
Cdd:COG4886   288 KLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLL 367
PLN03150 PLN03150
hypothetical protein; Provisional
 214-289 3.38e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 60.60  E-value: 3.38e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1384039590 214 LPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLP-LVQNLTKLSILHLSDNHFSGTIPSSL 289
Cdd:PLN03150  434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPeSLGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 227-320 1.28e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.67  E-value: 1.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 227 LDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLPL-VQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNL 305
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                          90
                  ....*....|....*
gi 1384039590 306 SGsiEVPnSSLSSRL 320
Cdd:PLN03150  503 SG--RVP-AALGGRL 514
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
198-653 2.45e-07

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 54.17  E-value: 2.45e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 198 NLAYLDLGSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLPLVQNLTKLSILHLS 277
Cdd:COG4886     2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 278 DNHFSGTiPSSLFTMPFLSYLDLGGNNLSGSIevpnsslsSRLENLNLGENHFEgKIIEPISKLINLKELHLSFLNtsyp 357
Cdd:COG4886    82 LSLLLLG-LTDLGDLTNLTELDLSGNEELSNL--------TNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQ---- 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 358 inlklfsslkylllldlsggwISQASLSLDSYipSTLEALLLKHCNISVFPNILKTLPNLEFIALSTNKISgKIPEWLWS 437
Cdd:COG4886   148 ---------------------LTDLPEPLGNL--TNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQIT-DLPEPLGN 203

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 438 LPRLSSVFIEENLFTGFegSSEILVNSSVRILNLLSNNLEgalphlplsvnyfsarnnryggDIPlSICSRRSLVFLDLS 517
Cdd:COG4886   204 LTNLEELDLSGNQLTDL--PEPLANLTNLETLDLSNNQLT----------------------DLP-ELGNLTNLEELDLS 258

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 518 YNNFTGpIPPCP--SNFLILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFP 595
Cdd:COG4886   259 NNQLTD-LPPLAnlTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTL 337

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1384039590 596 FSLKALPKLQVLILHSNNFYGPLSPPNQGSLGFPELRILEIAGNKFTGSLPPDFFENW 653
Cdd:COG4886   338 TTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLT 395
PLN03150 PLN03150
hypothetical protein; Provisional
 196-263 1.01e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 52.51  E-value: 1.01e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1384039590 196 LHNLAYLDLgSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLP 263
Cdd:PLN03150  441 LRHLQSINL-SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 535-632 1.74e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 51.74  E-value: 1.74e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 535 LNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPklqvliLH--SN 612
Cdd:PLN03150  447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL------LHraSF 520

                          90       100
                  ....*....|....*....|
gi 1384039590 613 NFygplsPPNQGSLGFPELR 632
Cdd:PLN03150  521 NF-----TDNAGLCGIPGLR 535
PLN03150 PLN03150
hypothetical protein; Provisional
 535-616 5.77e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.20  E-value: 5.77e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 535 LNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNF 614
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                  ..
gi 1384039590 615 YG 616
Cdd:PLN03150  503 SG 504
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 97-282 8.32e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.86  E-value: 8.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  97 QFHQLRHLYLsYNNFtpssipsefgmLNKLEVLfmstggflgqvpssfSNLSMLSALLLHHNELTgSLSFVRNLRKLTIL 176
Cdd:cd21340    22 LCKNLKVLYL-YDNK-----------ITKIENL---------------EFLTNLTHLYLQNNQIE-KIENLENLVNLKKL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 177 DVSHNHFS---GtLNPNSSLFELH------------------------NLAYLDLGSNNFTSSSlpyEFGNLNKLELLDV 229
Cdd:cd21340    74 YLGGNRISvveG-LENLTNLEELHienqrlppgekltfdprslaalsnSLRVLNISGNNIDSLE---PLAPLRNLEQLDA 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1384039590 230 SSNsffgqvppTISNLTQLTELylplndftgslplVQNLTKLSILHLSDNHFS 282
Cdd:cd21340   150 SNN--------QISDLEELLDL-------------LSSWPSLRELDLTGNPVC 181
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
385-614 8.78e-06

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 49.70  E-value: 8.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 385 SLDSYIPSTLEALLLKHCNISVFPNILK------------------TLPN-LEFIALSTNKISgKIPEWLWSlpRLSSVF 445
Cdd:PRK15370  192 TIPACIPEQITTLILDNNELKSLPENLQgniktlyansnqltsipaTLPDtIQEMELSINRIT-ELPERLPS--ALQSLD 268

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 446 IEENLFTGFEGSseilVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNNRYG---GDIPLSIcsrRSLVFLDLSYNNFT 522
Cdd:PRK15370  269 LFHNKISCLPEN----LPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTalpETLPPGL---KTLEAGENALTSLP 341

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 523 GPIPPCPSNFLILNLRKNNLEGSIPDTyyadapLRSLDVGYNRLTgKLPRSLlnCSALQFLSVDHNG---IKDTFPFSLK 599
Cdd:PRK15370  342 ASLPPELQVLDVSKNQITVLPETLPPT------ITTLDVSRNALT-NLPENL--PAALQIMQASRNNlvrLPESLPHFRG 412

                         250
                  ....*....|....*
gi 1384039590 600 ALPKLQVLILHSNNF 614
Cdd:PRK15370  413 EGPQPTRIIVEYNPF 427
PLN03150 PLN03150
hypothetical protein; Provisional
 469-547 9.23e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 49.43  E-value: 9.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 469 LNLLSNNLEGALP-------HLPlSVNYfsaRNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN03150  423 LGLDNQGLRGFIPndisklrHLQ-SINL---SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESlgqLTSLRILNLN 498


                  ....*....
gi 1384039590 539 KNNLEGSIP 547
Cdd:PLN03150  499 GNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 85-164 8.55e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.55e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590  85 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 164
Cdd:PLN03150  430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
PLN03150 PLN03150
hypothetical protein; Provisional
 701-746 2.06e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 45.19  E-value: 2.06e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1384039590 701 LSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSL 746
Cdd:PLN03150  465 ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
LRR_8 pfam13855
Leucine rich repeat;
171-234 2.14e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.82  E-value: 2.14e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1384039590 171 RKLTILDVSHNHFSGTlnPNSSLFELHNLAYLDLGSNNFTSSSlPYEFGNLNKLELLDVSSNSF 234
Cdd:pfam13855   1 PNLRSLDLSNNRLTSL--DDGAFKGLSNLKVLDLSNNLLTTLS-PGAFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 135-219 2.37e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.81  E-value: 2.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 135 GFLGQVPSSFSNLSMLSALLLHHNELTGSLSF-VRNLRKLTILDVSHNHFSGTLnpNSSLFELHNLAYLDLgSNNFTSSS 213
Cdd:PLN03150  429 GLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNGSI--PESLGQLTSLRILNL-NGNSLSGR 505


                  ....*.
gi 1384039590 214 LPYEFG 219
Cdd:PLN03150  506 VPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 406-481 9.13e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.88  E-value: 9.13e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1384039590 406 VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGFEGSSEILVnSSVRILNLLSNNLEGALP 481
Cdd:PLN03150  433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL-TSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 566-646 1.16e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.50  E-value: 1.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1384039590 566 LTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPLsPPNQGSLgfPELRILEIAGNKFTGSL 645
Cdd:PLN03150  430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI-PESLGQL--TSLRILNLNGNSLSGRV 506


                  .
gi 1384039590 646 P 646
Cdd:PLN03150  507 P 507
PLN03150 PLN03150
hypothetical protein; Provisional
 274-349 2.46e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 41.34  E-value: 2.46e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1384039590 274 LHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHL 349
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITS-LEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
LRR_8 pfam13855
Leucine rich repeat;
706-762 3.23e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.73  E-value: 3.23e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1384039590 706 TIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQL 762
Cdd:pfam13855   5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
534-590 6.07e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.96  E-value: 6.07e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1384039590 534 ILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGI 590
Cdd:pfam13855   5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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