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Conserved domains on  [gi|613388750|gb|EZZ92636|]
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ATP synthase gamma chain [Staphylococcus aureus VET0057R]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 2.97e-144

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 406.42  E-value: 2.97e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAgASSNTNHPMLRPRKITRSGYLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLA-SASEYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 161 SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGhlSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEH 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETS--WDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 613388750 241 ATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 2.97e-144

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 406.42  E-value: 2.97e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAgASSNTNHPMLRPRKITRSGYLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLA-SASEYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 161 SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGhlSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEH 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETS--WDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 613388750 241 ATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 7.15e-137

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 387.97  E-value: 7.15e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 161 SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGH-GHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASE 239
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEwETRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 613388750 240 HATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-286 4.76e-128

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 365.31  E-value: 4.76e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750    3 SLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVIT 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   83 SDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVP-DQPSFKSVQALANHAIDLYS 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSLgDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  162 EEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEHA 241
Cdd:pfam00231 161 AGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 613388750  242 TRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAA 286
Cdd:pfam00231 241 ARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 2.89e-113

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 328.10  E-value: 2.89e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750    2 ASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVI 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   82 TSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLYS 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  162 EEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEHA 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 613388750  242 TRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 3.10e-111

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 322.60  E-value: 3.10e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   2 ASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVI 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  82 TSDKGLAGAYSANVLKKLITDIEAKhqDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLYS 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKEA--DGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 162 EEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSS-YEFEPDKESILSVILPQYVESLIYGTILDAKASEH 240
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSdYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 613388750 241 ATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGS 284
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-287 2.97e-144

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 406.42  E-value: 2.97e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAgASSNTNHPMLRPRKITRSGYLV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLA-SASEYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 161 SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGhlSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEH 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETS--WDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQ 237

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 613388750 241 ATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:PRK05621 238 AARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-287 7.15e-137

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 387.97  E-value: 7.15e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 161 SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGH-GHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASE 239
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEwETRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 613388750 240 HATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-286 4.76e-128

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 365.31  E-value: 4.76e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750    3 SLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVIT 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   83 SDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVP-DQPSFKSVQALANHAIDLYS 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEFTGSLgDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  162 EEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEHA 241
Cdd:pfam00231 161 AGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 613388750  242 TRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAA 286
Cdd:pfam00231 241 ARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-287 2.89e-113

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 328.10  E-value: 2.89e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750    2 ASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVI 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   82 TSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLYS 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  162 EEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEHA 241
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 613388750  242 TRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-284 3.10e-111

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 322.60  E-value: 3.10e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   2 ASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVI 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  82 TSDKGLAGAYSANVLKKLITDIEAKhqDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLYS 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIKEA--DGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 162 EEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSS-YEFEPDKESILSVILPQYVESLIYGTILDAKASEH 240
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSRSdYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 613388750 241 ATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGS 284
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-287 7.24e-92

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 273.86  E-value: 7.24e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLV 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLY 160
Cdd:PRK13423  81 VTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEGY 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 161 SEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSkGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEH 240
Cdd:PRK13423 161 LAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAA-DDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEH 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 613388750 241 ATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:PRK13423 240 GARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-288 1.12e-83

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 253.18  E-value: 1.12e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASS--NTNHPMLRPR-KITRSG 77
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVgaARVGPLLEKRpTVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  78 YLVITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAI 157
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 158 DLYSEEEIDELNIYYSHYVSVLENKPTSRQVLPLsqEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKA 237
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPI--EPPEISTTTVVDYTYEPSPEEVLRALLPRFVEVQLYQAVLESIA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 613388750 238 SEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAALE 288
Cdd:PRK14111 239 SEHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALG 289
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-288 7.98e-76

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 233.10  E-value: 7.98e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPR-KITRSGYL 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVReEIKTCGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  80 VITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDL 159
Cdd:PRK13424  81 LITSDRGLCGSFNANLINAALKLAKQKTAEGKTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQLANSIGLEVIDG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 160 YSEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSS-YEFEPDKESILSVILPQYVESLIYGTILDAKAS 238
Cdd:PRK13424 161 YLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEEAEEEEAGASSeYIYEPSVEGLLAELLPRFIKVQIYRGLLDTSAS 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 613388750 239 EHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAALE 288
Cdd:PRK13424 241 EHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALK 290
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-288 1.65e-69

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 216.73  E-value: 1.65e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLR-PRKITRSGYL 79
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRrPEKIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  80 VITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDL 159
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 160 YSEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASE 239
Cdd:PRK13427 161 FANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVQDDVVYEPSPEAILESLLPLVVKTAFLKAILEANASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 613388750 240 HATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAALE 288
Cdd:PRK13427 241 QIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-288 9.07e-68

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 212.36  E-value: 9.07e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPR-KITRSGYL 79
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRsEVNKVLVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  80 VITSDKGLAGAYSANVLK---KLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHA 156
Cdd:PRK13425  81 LITSDRGLCGAFNTNIIKlaqKVIHEDYAALHAKGGVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAETA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 157 IDLYSEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGhlSSYEFEPDKESILSVILPQYVESLIYGTILDAK 236
Cdd:PRK13425 161 SGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGAEGG--SDYIYEPSPAAIIDELVPKHLNTQVWRMMLESN 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 613388750 237 ASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAALE 288
Cdd:PRK13425 239 AAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQ 290
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-287 1.61e-60

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 193.84  E-value: 1.61e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLV 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDI-EAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDL 159
Cdd:PRK13426  81 FSSNTSLCGGFNANIIKLLLQTIgEYRTLGQDNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLMEL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 160 YSEEEIDELNIYYSHYVSVLENKPTSRQVLPLS---QEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAK 236
Cdd:PRK13426 161 FLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDlsqEKNAEHAGGVANDYIIEPSADTVLNDLIPKLLSLKIYTALLDSN 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 613388750 237 ASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:PRK13426 241 ASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-288 4.41e-57

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 184.97  E-value: 4.41e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASL--KEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGY 78
Cdd:PRK14110   1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEKNVDL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  79 LVITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDV-PDQPSFKSVQALANHAI 157
Cdd:PRK14110  81 VIITADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDVfRKEINFSVVKEVGGILA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 158 DLYSEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKA 237
Cdd:PRK14110 161 SRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEKKLDELSVYNIEVSEEEFLDKLLQLYLNYQLYRALVESNA 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 613388750 238 SEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAALE 288
Cdd:PRK14110 241 AEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-287 7.11e-48

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 161.37  E-value: 7.11e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750   1 MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLV 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750  81 ITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDF---LKNRGYDIEYSQVDVPDQPSFKSVQALANHAI 157
Cdd:PRK13422  81 TSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFfakLKDVNIVATAHYNDKDKEGSIRAIGGAVKVML 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613388750 158 DLYSEEEIDELNIYYSHYVSVLENKPTSRQVLPL-----------SQEDSSKGHGhlsSYEFEPDKESILSVILPQYVES 226
Cdd:PRK13422 161 DKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIqdifsaeeikaNKEKATKGHW---DYIYERDIEEVLNALCIRYIEA 237

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 613388750 227 LIYGTILDAKASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAAL 287
Cdd:PRK13422 238 QVRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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