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Conserved domains on  [gi|613387705|gb|EZZ91630|]
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thymidylate kinase [Staphylococcus aureus VET0057R]

Protein Classification

dTMP kinase( domain architecture ID 11414784)

dTMP (thymidylate) kinase catalyzes the reversible phosphorylation of deoxythymidine monophosphate (dTMP) to deoxythymidine diphosphate (dTDP) using ATP as a phosphoryl donor

CATH:  3.40.50.300
EC:  2.7.4.9
PubMed:  23394555
SCOP:  4004030

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Tmk COG0125
Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the ...
4-203 2.31e-94

Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the Pathway/BioSystem: Thymidylate biosynthesis


:

Pssm-ID: 439895 [Multi-domain]  Cd Length: 206  Bit Score: 273.57  E-value: 2.31e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGN-DMDIRTEAMLFAASRREHLVLKVIPA 81
Cdd:COG0125    5 FIVFEGIDGSGKSTQIKLLAEYLEaRGYDVVLTREPGGTPLGEAIRELLLGDNeDMSPRTELLLFAADRAQHVEEVIRPA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  82 LKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHE 161
Cdd:COG0125   85 LAAGKIVICDRYVDSSLAYQGGGRGLDLEWIRQLNRFATGGLKPDLTILLDVPPEVALARARARGGELDRFESEDLEFHE 164
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 613387705 162 KVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLE 203
Cdd:COG0125  165 RVREGYLELAAKEPERIVVIDASQSIEEVHAEIREALAELLK 206
 
Name Accession Description Interval E-value
Tmk COG0125
Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the ...
4-203 2.31e-94

Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the Pathway/BioSystem: Thymidylate biosynthesis


Pssm-ID: 439895 [Multi-domain]  Cd Length: 206  Bit Score: 273.57  E-value: 2.31e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGN-DMDIRTEAMLFAASRREHLVLKVIPA 81
Cdd:COG0125    5 FIVFEGIDGSGKSTQIKLLAEYLEaRGYDVVLTREPGGTPLGEAIRELLLGDNeDMSPRTELLLFAADRAQHVEEVIRPA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  82 LKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHE 161
Cdd:COG0125   85 LAAGKIVICDRYVDSSLAYQGGGRGLDLEWIRQLNRFATGGLKPDLTILLDVPPEVALARARARGGELDRFESEDLEFHE 164
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 613387705 162 KVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLE 203
Cdd:COG0125  165 RVREGYLELAAKEPERIVVIDASQSIEEVHAEIREALAELLK 206
TMPK cd01672
Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the ...
4-200 5.16e-84

Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).


Pssm-ID: 238835  Cd Length: 200  Bit Score: 247.18  E-value: 5.16e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   4 FITFEGPEGSGKTTVINEVYHRLVKD-YDVIMTREPGGVPTGEEIRKIVL--EGNDMDIRTEAMLFAASRREHLVLKVIP 80
Cdd:cd01672    2 FIVFEGIDGAGKTTLIELLAERLEARgYEVVLTREPGGTPIGEAIRELLLdpEDEKMDPRAELLLFAADRAQHVEEVIKP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  81 ALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQnRLDQEDLKFH 160
Cdd:cd01672   82 ALARGKIVLSDRFVDSSLAYQGAGRGLGEALIEALNDLATGGLKPDLTILLDIDPEVGLARIEARGRDD-RDEQEGLEFH 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 613387705 161 EKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIK 200
Cdd:cd01672  161 ERVREGYLELAAQEPERIIVIDASQPLEEVLAEILKAILE 200
DTMP_kinase TIGR00041
dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage ...
4-193 2.38e-62

dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 161676  Cd Length: 195  Bit Score: 192.19  E-value: 2.38e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    4 FITFEGPEGSGKTTVINEVYHRL-VKDYDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIP 80
Cdd:TIGR00041   5 FIVIEGIDGAGKTTQANLLKKLLqENGYDVLFTREPGGTPIGEKIRELLLNENDepLTDKAEALLFAADRHEHLEDKIKP 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   81 ALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAInGLYPDLTIYLNVSAEVGRERIIKNsRDQNRLDQEDLKFH 160
Cdd:TIGR00041  85 ALAEGKLVISDRYVFSSIAYQGGARGIDEDLVLELNEDAL-GDMPDLTIYLDIDPEVALERLRKR-GELDREEFEKLDFF 162
                         170       180       190
                  ....*....|....*....|....*....|...
gi 613387705  161 EKVIEGYQEIIHNEsQRFKSVNADQPLENVVED 193
Cdd:TIGR00041 163 EKVRQRYLELADKE-KSIHVIDATNSVEEVEQD 194
Thymidylate_kin pfam02223
Thymidylate kinase;
7-193 4.18e-51

Thymidylate kinase;


Pssm-ID: 396690  Cd Length: 184  Bit Score: 163.24  E-value: 4.18e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    7 FEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEG 85
Cdd:pfam02223   1 IEGLDGAGKTTQAELLKERLKeQGIKVVFTREPGGTPIGEKIRELLLRNEELSPLTEALLFAADRIQHLEQKIKPALKQG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   86 KVVLCDRYIDSSLAYQGYARGiGVEEVRALNEFAinGLYPDLTIYLNVSAEVGRERIIKNSRDqNRLDQEDLKFHEKVIE 165
Cdd:pfam02223  81 KTVIVDRYLFSGIAYQGAKGG-DLDLVLSLNPDV--PGKPDLTFLLDVDPEVALKRLRRRGEL-EKTEFEQLDFLRKVRE 156
                         170       180
                  ....*....|....*....|....*...
gi 613387705  166 GYQEIIhNESQRFKSVNADQPLENVVED 193
Cdd:pfam02223 157 RYLELA-KFDERIKIIDASLSIEEVHEE 183
PLN02924 PLN02924
thymidylate kinase
3-204 1.08e-17

thymidylate kinase


Pssm-ID: 178512  Cd Length: 220  Bit Score: 77.84  E-value: 1.08e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   3 AFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPG-GVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLkVIP 80
Cdd:PLN02924  17 ALIVLEGLDRSGKSTQCAKLVSFLKgLGVAAELWRFPDrTTSVGQMISAYLSNKSQLDDRAIHLLFSANRWEKRSL-MER 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  81 ALKEGKVVLCDRYIDSSLAYQGyARGIGVEEVRALNefaiNGL-YPDLTIYLNVSAEVGRERiikNSRDQNRLdqEDLKF 159
Cdd:PLN02924  96 KLKSGTTLVVDRYSYSGVAFSA-AKGLDLEWCKAPE----VGLpAPDLVLYLDISPEEAAER---GGYGGERY--EKLEF 165
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 613387705 160 HEKVIEGYQEIihnESQRFKSVNADQPLENVVEDTYQTIIKYLEK 204
Cdd:PLN02924 166 QKKVAKRFQTL---RDSSWKIIDASQSIEEVEKKIREVVLDTVQR 207
 
Name Accession Description Interval E-value
Tmk COG0125
Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the ...
4-203 2.31e-94

Thymidylate kinase [Nucleotide transport and metabolism]; Thymidylate kinase is part of the Pathway/BioSystem: Thymidylate biosynthesis


Pssm-ID: 439895 [Multi-domain]  Cd Length: 206  Bit Score: 273.57  E-value: 2.31e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGN-DMDIRTEAMLFAASRREHLVLKVIPA 81
Cdd:COG0125    5 FIVFEGIDGSGKSTQIKLLAEYLEaRGYDVVLTREPGGTPLGEAIRELLLGDNeDMSPRTELLLFAADRAQHVEEVIRPA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  82 LKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHE 161
Cdd:COG0125   85 LAAGKIVICDRYVDSSLAYQGGGRGLDLEWIRQLNRFATGGLKPDLTILLDVPPEVALARARARGGELDRFESEDLEFHE 164
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 613387705 162 KVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLE 203
Cdd:COG0125  165 RVREGYLELAAKEPERIVVIDASQSIEEVHAEIREALAELLK 206
TMPK cd01672
Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the ...
4-200 5.16e-84

Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor. TMPK represents the rate-limiting step in either de novo or salvage biosynthesis of thymidine triphosphate (TTP).


Pssm-ID: 238835  Cd Length: 200  Bit Score: 247.18  E-value: 5.16e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   4 FITFEGPEGSGKTTVINEVYHRLVKD-YDVIMTREPGGVPTGEEIRKIVL--EGNDMDIRTEAMLFAASRREHLVLKVIP 80
Cdd:cd01672    2 FIVFEGIDGAGKTTLIELLAERLEARgYEVVLTREPGGTPIGEAIRELLLdpEDEKMDPRAELLLFAADRAQHVEEVIKP 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  81 ALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQnRLDQEDLKFH 160
Cdd:cd01672   82 ALARGKIVLSDRFVDSSLAYQGAGRGLGEALIEALNDLATGGLKPDLTILLDIDPEVGLARIEARGRDD-RDEQEGLEFH 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 613387705 161 EKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIK 200
Cdd:cd01672  161 ERVREGYLELAAQEPERIIVIDASQPLEEVLAEILKAILE 200
DTMP_kinase TIGR00041
dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage ...
4-193 2.38e-62

dTMP kinase; Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate. [Purines, pyrimidines, nucleosides, and nucleotides, Nucleotide and nucleoside interconversions]


Pssm-ID: 161676  Cd Length: 195  Bit Score: 192.19  E-value: 2.38e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    4 FITFEGPEGSGKTTVINEVYHRL-VKDYDVIMTREPGGVPTGEEIRKIVLEGND--MDIRTEAMLFAASRREHLVLKVIP 80
Cdd:TIGR00041   5 FIVIEGIDGAGKTTQANLLKKLLqENGYDVLFTREPGGTPIGEKIRELLLNENDepLTDKAEALLFAADRHEHLEDKIKP 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   81 ALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAInGLYPDLTIYLNVSAEVGRERIIKNsRDQNRLDQEDLKFH 160
Cdd:TIGR00041  85 ALAEGKLVISDRYVFSSIAYQGGARGIDEDLVLELNEDAL-GDMPDLTIYLDIDPEVALERLRKR-GELDREEFEKLDFF 162
                         170       180       190
                  ....*....|....*....|....*....|...
gi 613387705  161 EKVIEGYQEIIHNEsQRFKSVNADQPLENVVED 193
Cdd:TIGR00041 163 EKVRQRYLELADKE-KSIHVIDATNSVEEVEQD 194
Thymidylate_kin pfam02223
Thymidylate kinase;
7-193 4.18e-51

Thymidylate kinase;


Pssm-ID: 396690  Cd Length: 184  Bit Score: 163.24  E-value: 4.18e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    7 FEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEG 85
Cdd:pfam02223   1 IEGLDGAGKTTQAELLKERLKeQGIKVVFTREPGGTPIGEKIRELLLRNEELSPLTEALLFAADRIQHLEQKIKPALKQG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   86 KVVLCDRYIDSSLAYQGYARGiGVEEVRALNEFAinGLYPDLTIYLNVSAEVGRERIIKNSRDqNRLDQEDLKFHEKVIE 165
Cdd:pfam02223  81 KTVIVDRYLFSGIAYQGAKGG-DLDLVLSLNPDV--PGKPDLTFLLDVDPEVALKRLRRRGEL-EKTEFEQLDFLRKVRE 156
                         170       180
                  ....*....|....*....|....*...
gi 613387705  166 GYQEIIhNESQRFKSVNADQPLENVVED 193
Cdd:pfam02223 157 RYLELA-KFDERIKIIDASLSIEEVHEE 183
PLN02924 PLN02924
thymidylate kinase
3-204 1.08e-17

thymidylate kinase


Pssm-ID: 178512  Cd Length: 220  Bit Score: 77.84  E-value: 1.08e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   3 AFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPG-GVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLkVIP 80
Cdd:PLN02924  17 ALIVLEGLDRSGKSTQCAKLVSFLKgLGVAAELWRFPDrTTSVGQMISAYLSNKSQLDDRAIHLLFSANRWEKRSL-MER 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  81 ALKEGKVVLCDRYIDSSLAYQGyARGIGVEEVRALNefaiNGL-YPDLTIYLNVSAEVGRERiikNSRDQNRLdqEDLKF 159
Cdd:PLN02924  96 KLKSGTTLVVDRYSYSGVAFSA-AKGLDLEWCKAPE----VGLpAPDLVLYLDISPEEAAER---GGYGGERY--EKLEF 165
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 613387705 160 HEKVIEGYQEIihnESQRFKSVNADQPLENVVEDTYQTIIKYLEK 204
Cdd:PLN02924 166 QKKVAKRFQTL---RDSSWKIIDASQSIEEVEKKIREVVLDTVQR 207
PRK07933 PRK07933
dTMP kinase;
5-151 3.74e-10

dTMP kinase;


Pssm-ID: 236133  Cd Length: 213  Bit Score: 57.29  E-value: 3.74e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   5 ITFEGPEGSGKTTVINEVYHRLVKDYDVIMTRE-P--GGVPTGEEIRKiVLEGNDMD----IRTEAMLFAASRREhlVLK 77
Cdd:PRK07933   3 IAIEGVDGAGKRTLTEALRAALEARGRSVATLAfPryGRSVHADLAAE-ALHGRHGDladsVYAMATLFALDRAG--ARD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  78 VIPALKEG-KVVLCDRYIDSSLAYQ-----GYARGIGVEEVRALnEFAINGL-YPDLTIYLNVSAEVGRERII-KNSRDQ 149
Cdd:PRK07933  80 ELAGLLAAhDVVILDRYVASNAAYSaarlhQDADGEAVAWVAEL-EFGRLGLpVPDLQVLLDVPVELAAERARrRAAQDA 158

                 ..
gi 613387705 150 NR 151
Cdd:PRK07933 159 DR 160
AAA_28 pfam13521
AAA domain;
4-169 7.78e-06

AAA domain;


Pssm-ID: 433278 [Multi-domain]  Cd Length: 164  Bit Score: 44.18  E-value: 7.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    4 FITFEGPEGSGKTTVINEV----YHRLVKDYDVIMTREpGGVPTGEEIRkivlEGNDMDIRTEAMLFAASRREHlvlkvi 79
Cdd:pfam13521   1 RIVITGGPSTGKTTLAEALaarfGYPVVPEAAREILEE-LGADGGDALP----WVEDLLAFARGVLEAQLEDEA------ 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   80 pALKEGKVVLCDRyidSSLAYQGYARGIGVEEVRALNEFAINGLYpDLTIYLNVSAEVgreriiknsrDQNRLDQEDL-- 157
Cdd:pfam13521  70 -AAAANDLLFFDR---GPLDTLAYSRAYGGPCPPELEAAARASRY-DLVFLLPPDPEI----------VQDGERREDPee 134
                         170
                  ....*....|....
gi 613387705  158 --KFHEKVIEGYQE 169
Cdd:pfam13521 135 reRFHERLREALRE 148
dNK cd01673
Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to ...
4-173 1.45e-05

Deoxyribonucleoside kinase (dNK) catalyzes the phosphorylation of deoxyribonucleosides to yield corresponding monophosphates (dNMPs). This family consists of various deoxynucleoside kinases including deoxyribo- cytidine (EC 2.7.1.74), guanosine (EC 2.7.1.113), adenosine (EC 2.7.1.76), and thymidine (EC 2.7.1.21) kinases. They are key enzymes in the salvage of deoxyribonucleosides originating from extra- or intracellular breakdown of DNA.


Pssm-ID: 238836  Cd Length: 193  Bit Score: 43.76  E-value: 1.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   4 FITFEGPEGSGKTTVINEVYHRLvkDYDVImtREPGgvpTGEEIRKIVLEGNDMDIRTEA----MLFAASRREHLvLKVI 79
Cdd:cd01673    1 VIVVEGNIGAGKSTLAKELAEHL--GYEVV--PEPV---EPDVEGNPFLEKFYEDPKRWAfpfqLYFLLSRLKQY-KDAL 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  80 PALKEGKVVL------CDRYIDSSLAYQGYargIGVEEVRALNEFAIN----GLYPDLTIYLNVSAEVGRERIIKNSRDq 149
Cdd:cd01673   73 EHLSTGQGVIlersifSDRVFAEANLKEGG---IMKTEYDLYNELFDNlipeLLPPDLVIYLDASPETCLKRIKKRGRP- 148
                        170       180
                 ....*....|....*....|....*
gi 613387705 150 nrldqedlkfHEKVI-EGYQEIIHN 173
Cdd:cd01673  149 ----------EEQGIpLDYLEDLHE 163
Dck COG1428
Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];
1-205 3.32e-05

Deoxyadenosine/deoxycytidine kinase [Nucleotide transport and metabolism];


Pssm-ID: 441037 [Multi-domain]  Cd Length: 205  Bit Score: 42.85  E-value: 3.32e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705   1 MSAFITFEGPEGSGKTTVINevyhRLVKDYDVIMTREPggvptgeeirkivLEGN--------DMD---IRTEaMLFAAS 69
Cdd:COG1428    2 KPRYIAVEGNIGAGKTTLAR----LLAEHLGAELLLEP-------------VEDNpfledfyeDPKrwaFPLQ-LFFLLS 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705  70 RREHLvlkvIPALKEGKVVLCDRYIDSSLAYqgyARGIGVEEVRALNEFAI-NGLY---------PDLTIYLNVSAEVGR 139
Cdd:COG1428   64 RFKQL----KDLRQFGGNVVSDRSIYKDAIF---AKLLHEMGTLSDREFDLyRQLFdnltedlpkPDLVIYLQASVDTLL 136
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 613387705 140 ERIIKNSRDQNRLDQEDlkFHEKVIEGYQEIIHN-ESQRFKSVNADQ--PLENvvEDTYQTIIKYLEKI 205
Cdd:COG1428  137 ERIKKRGRDYEQNIDLD--YLERLNEAYEEWFEHyDASPVLIIDTDEldFVNN--PEDLELLLEQIEEK 201
AAA_17 pfam13207
AAA domain;
9-156 2.54e-04

AAA domain;


Pssm-ID: 463810 [Multi-domain]  Cd Length: 136  Bit Score: 39.53  E-value: 2.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    9 GPEGSGKTTVINevyhRLVKDYDVIMtrepggVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKE---G 85
Cdd:pfam13207   2 GVPGSGKTTQLK----KLAEKLGFPH------ISAGDLLREEAKERGLVEDRDEMRKLPLEPQKELQKLAAERIAEeagE 71
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 613387705   86 KVVLcdryIDsslayqGYARGIGVEEVRA-LNEFAINGLYPDLTIYLNVSAEVGRERIIKnsrDQNRLDQED 156
Cdd:pfam13207  72 GGVI----VD------GHPRIKTPAGYLPgLPVEVLRELKPDAIILLEADPEEILERRLK---DRTRGRDDD 130
AAA_16 pfam13191
AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the ...
9-115 3.77e-03

AAA ATPase domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily.


Pssm-ID: 433025 [Multi-domain]  Cd Length: 167  Bit Score: 36.71  E-value: 3.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613387705    9 GPEGSGKTTVINEVYHRLVKDydvimtrepggvptgeeiRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVV 88
Cdd:pfam13191  31 GEAGTGKTTLLRELLRALERD------------------GGYFLRGKCDENLPYSPLLEALTREGLLRQLLDELESSLLE 92
                          90       100
                  ....*....|....*....|....*..
gi 613387705   89 LCDRYIDSSLAYQGYARGIGVEEVRAL 115
Cdd:pfam13191  93 AWRAALLEALAPVPELPGDLAERLLDL 119
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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