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hypothetical protein V164_01138 [Staphylococcus aureus USA7]
Protein Classification
BCCT family transporter ( domain architecture ID 10003438 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Bacillus subtilis glycine betaine transporter OpuD
List of domain hits
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-498
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 610.61
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 9 VF WV S LVICTI FV AF G AI FP KQLEKLTQNIT S F I ALH F S W Y YLLLVL VILFV C V Y IL FS R Y AS I T LG EEGED PEFS LP SW 88
Cdd:COG1292 17 VF IP S ALLILA FV LW G LL FP EAAGAVLNAAF S W I TTN F G W F YLLLVL LFVVF C L Y LA FS K Y GK I R LG GDDAK PEFS TF SW 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 89 FAMLFSAGMGIGLVFW TT AEP IS H AFKLT P IHKA G TQS A IND AM QFS FFHWG I HAWA V Y GI V A L VF AYF SFHK G Y P GLV S 168
Cdd:COG1292 97 FAMLFSAGMGIGLVFW GV AEP LY H FLSPP P GVEP G SPE A ARW AM AYT FFHWG L HAWA I Y AL V G L AL AYF AYRR G L P LTI S 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 169 AT L T PLLG EK a MR GP L G GA ID V LAV I ATV T GVA AT LG F GALQIN E GL HF LF NV P SNF T M Q V I L I VIA T I LFT W SA W SG I D 248
Cdd:COG1292 177 SA L Y PLLG DR - IY GP I G KV ID I LAV F ATV F GVA TS LG L GALQIN A GL NY LF GI P NSL T V Q I I I I AVI T A LFT I SA V SG L D 255
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 249 KGIK T LSN I NM L LA FVV L IGLF IVGPTL Y ILN T F TNG LG N Y IA NF FS MSL RIPSG G QK f Q WL QN WT I FYWAWWI S WAPFV 328
Cdd:COG1292 256 KGIK R LSN L NM V LA LLL L LFVL IVGPTL F ILN L F VQS LG D Y LQ NF VP MSL WTDAY G DT - G WL GG WT V FYWAWWI A WAPFV 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 329 G I FIAR V S K GRTI K EF I LGVL F VP AVVC F IF F A VFG AS AI Y L QD N HIA D I A K A ATE --- T A T FA T L QHY PLG FV LS LITL 405
Cdd:COG1292 335 G L FIAR I S R GRTI R EF V LGVL L VP TLFT F LW F S VFG GT AI H L EL N GGG D L A E A VAA gve A A L FA L L EQL PLG TI LS VLAI 414
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 406 LVIM IFFVTSADS ATY VL G ML S S S GD IN P KSFVKVS WG IIMA L F A IIMIYT GG TQ A I Q NLL II A ALPFS V V IIA M IW SL L 485
Cdd:COG1292 415 ILVI IFFVTSADS GSL VL A ML T S G GD EE P PRWQRIF WG VLIG L V A AVLLLA GG LS A L Q TAS II T ALPFS F V LLL M CV SL V 494
490
....*....|...
gi 613366473 486 K S L S E EKP R NSNK 498
Cdd:COG1292 495 K A L R E DPR R LRSA 507
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-498
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 610.61
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 9 VF WV S LVICTI FV AF G AI FP KQLEKLTQNIT S F I ALH F S W Y YLLLVL VILFV C V Y IL FS R Y AS I T LG EEGED PEFS LP SW 88
Cdd:COG1292 17 VF IP S ALLILA FV LW G LL FP EAAGAVLNAAF S W I TTN F G W F YLLLVL LFVVF C L Y LA FS K Y GK I R LG GDDAK PEFS TF SW 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 89 FAMLFSAGMGIGLVFW TT AEP IS H AFKLT P IHKA G TQS A IND AM QFS FFHWG I HAWA V Y GI V A L VF AYF SFHK G Y P GLV S 168
Cdd:COG1292 97 FAMLFSAGMGIGLVFW GV AEP LY H FLSPP P GVEP G SPE A ARW AM AYT FFHWG L HAWA I Y AL V G L AL AYF AYRR G L P LTI S 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 169 AT L T PLLG EK a MR GP L G GA ID V LAV I ATV T GVA AT LG F GALQIN E GL HF LF NV P SNF T M Q V I L I VIA T I LFT W SA W SG I D 248
Cdd:COG1292 177 SA L Y PLLG DR - IY GP I G KV ID I LAV F ATV F GVA TS LG L GALQIN A GL NY LF GI P NSL T V Q I I I I AVI T A LFT I SA V SG L D 255
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 249 KGIK T LSN I NM L LA FVV L IGLF IVGPTL Y ILN T F TNG LG N Y IA NF FS MSL RIPSG G QK f Q WL QN WT I FYWAWWI S WAPFV 328
Cdd:COG1292 256 KGIK R LSN L NM V LA LLL L LFVL IVGPTL F ILN L F VQS LG D Y LQ NF VP MSL WTDAY G DT - G WL GG WT V FYWAWWI A WAPFV 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 329 G I FIAR V S K GRTI K EF I LGVL F VP AVVC F IF F A VFG AS AI Y L QD N HIA D I A K A ATE --- T A T FA T L QHY PLG FV LS LITL 405
Cdd:COG1292 335 G L FIAR I S R GRTI R EF V LGVL L VP TLFT F LW F S VFG GT AI H L EL N GGG D L A E A VAA gve A A L FA L L EQL PLG TI LS VLAI 414
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 406 LVIM IFFVTSADS ATY VL G ML S S S GD IN P KSFVKVS WG IIMA L F A IIMIYT GG TQ A I Q NLL II A ALPFS V V IIA M IW SL L 485
Cdd:COG1292 415 ILVI IFFVTSADS GSL VL A ML T S G GD EE P PRWQRIF WG VLIG L V A AVLLLA GG LS A L Q TAS II T ALPFS F V LLL M CV SL V 494
490
....*....|...
gi 613366473 486 K S L S E EKP R NSNK 498
Cdd:COG1292 495 K A L R E DPR R LRSA 507
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
9-491
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 594.90
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 9 VF W VS LVICTI FV AF G A IFP KQ L EKLTQNITSF I ALH F S W Y YLLLVL VI L FVCVYIL FSRY AS I T LG EEGED PEFS LP SW 88
Cdd:pfam02028 1 VF A VS AGLILA FV LL G L IFP EA L SAVVNTALDW I TDN F G W F YLLLVL IF L VFALFLA FSRY GN I R LG GDDDK PEFS TF SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 89 FAMLF S AGMGIGLVFW TT AEP I SH AFKLT P IHKA GT QS A IND AM QFS FFHWG I HAWA V Y GI VAL VF AYF SFH KG Y P G L V S 168
Cdd:pfam02028 81 FAMLF A AGMGIGLVFW GV AEP L SH YLSPP P GGEP GT PE A AQQ AM AYT FFHWG L HAWA I Y AL VAL AL AYF AYR KG L P L L I S 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 169 AT L T PLLG EK a MR GP L G G AID V LA V IATV T GVA AT LG F GALQIN E GL HF LF NV P SNF T M Q VIL I V I A T I LFT W SA W SG I D 248
Cdd:pfam02028 161 SA L Y PLLG DR - ID GP I G K AID I LA I IATV F GVA TS LG L GALQIN A GL SY LF GI P NTL T T Q LAI I A I I T A LFT I SA V SG L D 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 249 KGIK T LSN I NM L LA FVV L IGLF I V GPTL Y ILNTF TNG LG N Y IA NF FS MS LRIPSG G QKFQ WL QN WTIFYWAWWI S WAPFV 328
Cdd:pfam02028 240 KGIK R LSN L NM Y LA VAL L LFVL I A GPTL F ILNTF VQS LG D Y LQ NF VP MS FYTDPF G DTGG WL GG WTIFYWAWWI A WAPFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 329 G I FIAR V S K GRTI K EFILGVL F VP AVVC F IF F A VFG AS AIYL QD N H --- I AD IAK A ATET A T FA T L QHY PLG FV LS LIT L 405
Cdd:pfam02028 320 G M FIAR I S R GRTI R EFILGVL L VP TLFT F LW F S VFG GT AIYL EL N G pgd L AD AVE A GPPA A L FA L L EQL PLG TI LS VLA L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 406 L V I M IFFVTSADS A T Y V LG MLSS S GD I NP KSFVK V S WG IIMALF A IIMIYT GG TQ A I Q NLL IIAALPFS VVIIA M IW SL L 485
Cdd:pfam02028 400 L L I I IFFVTSADS G T L V IA MLSS G GD L NP PRWQR V F WG VLLGAV A AVLLLA GG LE A L Q SAS IIAALPFS FILLL M CI SL F 479
....*.
gi 613366473 486 K S L S EE 491
Cdd:pfam02028 480 K A L R EE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
47-491
5.19e-154
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 447.18
E-value: 5.19e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 47 S W Y Y L L L V LVI L FVCV YI L FSRY AS I T LG EEG E D PEFS LP SW F AMLF S AGMG I GL V FW TT AEP ISHAFKLTPIHKAGTQS 126
Cdd:TIGR00842 1 G W A Y I L T V TLF L GFVL YI A FSRY GK I R LG RDD E K PEFS TL SW L AMLF A AGMG A GL M FW GV AEP LTYYLTPPFGAGPTSTT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 127 A IND A MQFSF FHWGIH A WA V Y GI V A L VF AYF S F H KG Y P GLV S AT L T PLLGEK A m R GP L G G AID V LA VI ATV T GVA AT LG F 206
Cdd:TIGR00842 81 A QEQ A LAYTL FHWGIH P WA I Y AL V G L AL AYF H F R KG L P LRL S SA L V PLLGEK V - N GP I G K AID I LA LV ATV F GVA TS LG L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 207 GA L QIN E GL HF LF NV P SN F TM Q VIL I VIA T I L FTW S AW SG ID KGIK T LSNINM L LAF VV L IGLF IVGPT LYI LN T F TNGL 286
Cdd:TIGR00842 160 GA P QIN A GL SA LF GI P DS F WL Q ALI I LCV T A L ACI S VA SG VG KGIK I LSNINM A LAF LL L LFVL IVGPT VFL LN S F VDSI 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 287 GNY IA NF FS MS L R IPSGGQ K FQ W LQN WT I FYWAWWISW A PFVG I FIAR V S K GRTI K EFI L GVL FV P AVVCFIF F A VFG A S 366
Cdd:TIGR00842 240 GNY LQ NF PQ MS F R TDPDDG K GG W PGG WT V FYWAWWISW S PFVG M FIAR I S R GRTI R EFI F GVL LG P TAFTWLW F S VFG N S 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 367 A IY LQ D N H ---- IADIAKAATET A T F AT L QHY PLG FVLSLIT L LV I M IFF V TSADSA TY VL GMLS S S G --- DIN P KSF V K 439
Cdd:TIGR00842 320 A LL LQ Q N G gfin GPFVVETNGAR A L F GL L AAL PLG TITMALA L IL I I IFF I TSADSA SL VL ANTT S R G gql GEE P PKW V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 613366473 440 V S W GIIMA L F A IIMIYT GG T - Q A I Q NLL IIAALPFS V V IIAMIW SL L K S L SEE 491
Cdd:TIGR00842 400 V F W AVAIG L I A LVLLFS GG S l A A L Q TTT IIAALPFS F V MLVVMF SL I K D L KQD 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
2-494
5.04e-124
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 378.27
E-value: 5.04e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 2 K NKSVSL VF WV S LVICTI F VAFGAI F PKQLEKLTQNITSFIALH F S WYYLL LVLVILFVCVY I LF SR YA SI T LG E E GED P 81
Cdd:PRK09928 12 K DRINPV VF YT S AGLILL F SLTTIL F TDFSNRWINRTLNWVSKT F G WYYLL AATLYIVFVIF I AC SR FG SI K LG P E QSK P 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 82 EFSL P SW F AMLF S AG M GI G L V F WTT AEP ISH a FKLT P IHKAG T QS A IND AM QFSF FH W G IHA W AV Y GIVALVFA YFS FHK 161
Cdd:PRK09928 92 EFSL L SW A AMLF A AG I GI D L M F FSV AEP VTQ - YMQP P EGAGQ T IE A ARQ AM VWTL FH Y G LTG W SM Y ALMGMALG YFS YRY 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 162 GY P GLVSAT L T P LL G EK a MR GP L G GAI D VL AVI A T VT G V A A TLG F G AL Q I N E GL HF LF NV P SNFTM Q VI LI VIAT I LF T W 241
Cdd:PRK09928 171 NL P LTIRSA L Y P IF G KR - IN GP I G HSV D IA AVI G T IF G I A T TLG I G VV Q L N Y GL SV LF DI P ESLAA Q AA LI ALSV I IA T I 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 242 S AW SG ID KGI KT LS NI N M LLA FVVLIGLFIV G P T LYI LN TFTNGL G N Y IAN F FS M S L RIPSGGQKFQ W LQ NWT I F Y WAWW 321
Cdd:PRK09928 250 S VT SG VN KGI RV LS EL N V LLA LGLILFVLFM G D T SFL LN ALVLNV G D Y VNR F MG M T L NSFAFDRPTE W MN NWT L F F WAWW 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 322 IS W A PFVG I F I AR V S K GRTI KE F I LG V L FV P AVVCFIFFAV FG A SA I Y L --- QDNHI A DI A K A AT E TATFAT L QH YP L - G 397
Cdd:PRK09928 330 VA W S PFVG L F L AR I S R GRTI RQ F V LG T L II P FTFTLLWLSI FG N SA L Y E iih GNAAF A EE A M A HP E RGFYSL L AQ YP A f T 409
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 398 F VL S LI T LLVI m I F F VTSADS ATY VLG MLS S S - G DIN PKS -- FVK V S W GIIMA L FAII M IY T G G TQ A I QN LLI I AA LPFS 474
Cdd:PRK09928 410 F SA S VA T ITGL - L F Y VTSADS GAL VLG NFT S K l K DIN SDA pn WLR V F W SVAIG L LTLG M LM T N G IS A L QN TTV I MG LPFS 488
490 500
....*....|....*....|
gi 613366473 475 V VI IAMIWS L L KSL SE E KP R 494
Cdd:PRK09928 489 F VI FFVMAG L Y KSL KV E DY R 508
Name
Accession
Description
Interval
E-value
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
9-498
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 610.61
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 9 VF WV S LVICTI FV AF G AI FP KQLEKLTQNIT S F I ALH F S W Y YLLLVL VILFV C V Y IL FS R Y AS I T LG EEGED PEFS LP SW 88
Cdd:COG1292 17 VF IP S ALLILA FV LW G LL FP EAAGAVLNAAF S W I TTN F G W F YLLLVL LFVVF C L Y LA FS K Y GK I R LG GDDAK PEFS TF SW 96
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 89 FAMLFSAGMGIGLVFW TT AEP IS H AFKLT P IHKA G TQS A IND AM QFS FFHWG I HAWA V Y GI V A L VF AYF SFHK G Y P GLV S 168
Cdd:COG1292 97 FAMLFSAGMGIGLVFW GV AEP LY H FLSPP P GVEP G SPE A ARW AM AYT FFHWG L HAWA I Y AL V G L AL AYF AYRR G L P LTI S 176
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 169 AT L T PLLG EK a MR GP L G GA ID V LAV I ATV T GVA AT LG F GALQIN E GL HF LF NV P SNF T M Q V I L I VIA T I LFT W SA W SG I D 248
Cdd:COG1292 177 SA L Y PLLG DR - IY GP I G KV ID I LAV F ATV F GVA TS LG L GALQIN A GL NY LF GI P NSL T V Q I I I I AVI T A LFT I SA V SG L D 255
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 249 KGIK T LSN I NM L LA FVV L IGLF IVGPTL Y ILN T F TNG LG N Y IA NF FS MSL RIPSG G QK f Q WL QN WT I FYWAWWI S WAPFV 328
Cdd:COG1292 256 KGIK R LSN L NM V LA LLL L LFVL IVGPTL F ILN L F VQS LG D Y LQ NF VP MSL WTDAY G DT - G WL GG WT V FYWAWWI A WAPFV 334
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 329 G I FIAR V S K GRTI K EF I LGVL F VP AVVC F IF F A VFG AS AI Y L QD N HIA D I A K A ATE --- T A T FA T L QHY PLG FV LS LITL 405
Cdd:COG1292 335 G L FIAR I S R GRTI R EF V LGVL L VP TLFT F LW F S VFG GT AI H L EL N GGG D L A E A VAA gve A A L FA L L EQL PLG TI LS VLAI 414
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 406 LVIM IFFVTSADS ATY VL G ML S S S GD IN P KSFVKVS WG IIMA L F A IIMIYT GG TQ A I Q NLL II A ALPFS V V IIA M IW SL L 485
Cdd:COG1292 415 ILVI IFFVTSADS GSL VL A ML T S G GD EE P PRWQRIF WG VLIG L V A AVLLLA GG LS A L Q TAS II T ALPFS F V LLL M CV SL V 494
490
....*....|...
gi 613366473 486 K S L S E EKP R NSNK 498
Cdd:COG1292 495 K A L R E DPR R LRSA 507
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
9-491
0e+00
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 594.90
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 9 VF W VS LVICTI FV AF G A IFP KQ L EKLTQNITSF I ALH F S W Y YLLLVL VI L FVCVYIL FSRY AS I T LG EEGED PEFS LP SW 88
Cdd:pfam02028 1 VF A VS AGLILA FV LL G L IFP EA L SAVVNTALDW I TDN F G W F YLLLVL IF L VFALFLA FSRY GN I R LG GDDDK PEFS TF SW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 89 FAMLF S AGMGIGLVFW TT AEP I SH AFKLT P IHKA GT QS A IND AM QFS FFHWG I HAWA V Y GI VAL VF AYF SFH KG Y P G L V S 168
Cdd:pfam02028 81 FAMLF A AGMGIGLVFW GV AEP L SH YLSPP P GGEP GT PE A AQQ AM AYT FFHWG L HAWA I Y AL VAL AL AYF AYR KG L P L L I S 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 169 AT L T PLLG EK a MR GP L G G AID V LA V IATV T GVA AT LG F GALQIN E GL HF LF NV P SNF T M Q VIL I V I A T I LFT W SA W SG I D 248
Cdd:pfam02028 161 SA L Y PLLG DR - ID GP I G K AID I LA I IATV F GVA TS LG L GALQIN A GL SY LF GI P NTL T T Q LAI I A I I T A LFT I SA V SG L D 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 249 KGIK T LSN I NM L LA FVV L IGLF I V GPTL Y ILNTF TNG LG N Y IA NF FS MS LRIPSG G QKFQ WL QN WTIFYWAWWI S WAPFV 328
Cdd:pfam02028 240 KGIK R LSN L NM Y LA VAL L LFVL I A GPTL F ILNTF VQS LG D Y LQ NF VP MS FYTDPF G DTGG WL GG WTIFYWAWWI A WAPFV 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 329 G I FIAR V S K GRTI K EFILGVL F VP AVVC F IF F A VFG AS AIYL QD N H --- I AD IAK A ATET A T FA T L QHY PLG FV LS LIT L 405
Cdd:pfam02028 320 G M FIAR I S R GRTI R EFILGVL L VP TLFT F LW F S VFG GT AIYL EL N G pgd L AD AVE A GPPA A L FA L L EQL PLG TI LS VLA L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 406 L V I M IFFVTSADS A T Y V LG MLSS S GD I NP KSFVK V S WG IIMALF A IIMIYT GG TQ A I Q NLL IIAALPFS VVIIA M IW SL L 485
Cdd:pfam02028 400 L L I I IFFVTSADS G T L V IA MLSS G GD L NP PRWQR V F WG VLLGAV A AVLLLA GG LE A L Q SAS IIAALPFS FILLL M CI SL F 479
....*.
gi 613366473 486 K S L S EE 491
Cdd:pfam02028 480 K A L R EE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
47-491
5.19e-154
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 447.18
E-value: 5.19e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 47 S W Y Y L L L V LVI L FVCV YI L FSRY AS I T LG EEG E D PEFS LP SW F AMLF S AGMG I GL V FW TT AEP ISHAFKLTPIHKAGTQS 126
Cdd:TIGR00842 1 G W A Y I L T V TLF L GFVL YI A FSRY GK I R LG RDD E K PEFS TL SW L AMLF A AGMG A GL M FW GV AEP LTYYLTPPFGAGPTSTT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 127 A IND A MQFSF FHWGIH A WA V Y GI V A L VF AYF S F H KG Y P GLV S AT L T PLLGEK A m R GP L G G AID V LA VI ATV T GVA AT LG F 206
Cdd:TIGR00842 81 A QEQ A LAYTL FHWGIH P WA I Y AL V G L AL AYF H F R KG L P LRL S SA L V PLLGEK V - N GP I G K AID I LA LV ATV F GVA TS LG L 159
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 207 GA L QIN E GL HF LF NV P SN F TM Q VIL I VIA T I L FTW S AW SG ID KGIK T LSNINM L LAF VV L IGLF IVGPT LYI LN T F TNGL 286
Cdd:TIGR00842 160 GA P QIN A GL SA LF GI P DS F WL Q ALI I LCV T A L ACI S VA SG VG KGIK I LSNINM A LAF LL L LFVL IVGPT VFL LN S F VDSI 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 287 GNY IA NF FS MS L R IPSGGQ K FQ W LQN WT I FYWAWWISW A PFVG I FIAR V S K GRTI K EFI L GVL FV P AVVCFIF F A VFG A S 366
Cdd:TIGR00842 240 GNY LQ NF PQ MS F R TDPDDG K GG W PGG WT V FYWAWWISW S PFVG M FIAR I S R GRTI R EFI F GVL LG P TAFTWLW F S VFG N S 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 367 A IY LQ D N H ---- IADIAKAATET A T F AT L QHY PLG FVLSLIT L LV I M IFF V TSADSA TY VL GMLS S S G --- DIN P KSF V K 439
Cdd:TIGR00842 320 A LL LQ Q N G gfin GPFVVETNGAR A L F GL L AAL PLG TITMALA L IL I I IFF I TSADSA SL VL ANTT S R G gql GEE P PKW V R 399
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 613366473 440 V S W GIIMA L F A IIMIYT GG T - Q A I Q NLL IIAALPFS V V IIAMIW SL L K S L SEE 491
Cdd:TIGR00842 400 V F W AVAIG L I A LVLLFS GG S l A A L Q TTT IIAALPFS F V MLVVMF SL I K D L KQD 452
PRK09928
PRK09928 choline transport protein BetT; Provisional
2-494
5.04e-124
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 378.27
E-value: 5.04e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 2 K NKSVSL VF WV S LVICTI F VAFGAI F PKQLEKLTQNITSFIALH F S WYYLL LVLVILFVCVY I LF SR YA SI T LG E E GED P 81
Cdd:PRK09928 12 K DRINPV VF YT S AGLILL F SLTTIL F TDFSNRWINRTLNWVSKT F G WYYLL AATLYIVFVIF I AC SR FG SI K LG P E QSK P 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 82 EFSL P SW F AMLF S AG M GI G L V F WTT AEP ISH a FKLT P IHKAG T QS A IND AM QFSF FH W G IHA W AV Y GIVALVFA YFS FHK 161
Cdd:PRK09928 92 EFSL L SW A AMLF A AG I GI D L M F FSV AEP VTQ - YMQP P EGAGQ T IE A ARQ AM VWTL FH Y G LTG W SM Y ALMGMALG YFS YRY 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 162 GY P GLVSAT L T P LL G EK a MR GP L G GAI D VL AVI A T VT G V A A TLG F G AL Q I N E GL HF LF NV P SNFTM Q VI LI VIAT I LF T W 241
Cdd:PRK09928 171 NL P LTIRSA L Y P IF G KR - IN GP I G HSV D IA AVI G T IF G I A T TLG I G VV Q L N Y GL SV LF DI P ESLAA Q AA LI ALSV I IA T I 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 242 S AW SG ID KGI KT LS NI N M LLA FVVLIGLFIV G P T LYI LN TFTNGL G N Y IAN F FS M S L RIPSGGQKFQ W LQ NWT I F Y WAWW 321
Cdd:PRK09928 250 S VT SG VN KGI RV LS EL N V LLA LGLILFVLFM G D T SFL LN ALVLNV G D Y VNR F MG M T L NSFAFDRPTE W MN NWT L F F WAWW 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 322 IS W A PFVG I F I AR V S K GRTI KE F I LG V L FV P AVVCFIFFAV FG A SA I Y L --- QDNHI A DI A K A AT E TATFAT L QH YP L - G 397
Cdd:PRK09928 330 VA W S PFVG L F L AR I S R GRTI RQ F V LG T L II P FTFTLLWLSI FG N SA L Y E iih GNAAF A EE A M A HP E RGFYSL L AQ YP A f T 409
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 398 F VL S LI T LLVI m I F F VTSADS ATY VLG MLS S S - G DIN PKS -- FVK V S W GIIMA L FAII M IY T G G TQ A I QN LLI I AA LPFS 474
Cdd:PRK09928 410 F SA S VA T ITGL - L F Y VTSADS GAL VLG NFT S K l K DIN SDA pn WLR V F W SVAIG L LTLG M LM T N G IS A L QN TTV I MG LPFS 488
490 500
....*....|....*....|
gi 613366473 475 V VI IAMIWS L L KSL SE E KP R 494
Cdd:PRK09928 489 F VI FFVMAG L Y KSL KV E DY R 508
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
9-486
1.66e-72
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 238.87
E-value: 1.66e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 9 VF WVS L V I CT I FVAFGAIFPKQLEKLTQNIT S FIALHFS W YYLLLVL V I LF VCVYIL F SR YA SIT LG E E ge D PEFS LP SW 88
Cdd:PRK03356 14 VF FPP L I I VG I LCWLTVRDLDAANVVINAVF S YVTNVWG W AFEWYMV V M LF GWFWLV F GP YA KKR LG D E -- K PEFS TA SW 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 89 FA M L F SAGMGIGLV FW TTA E ---- PISHA F K L T P I hkag TQS A INDAMQF S F FHWG IHA WA V Y GIVALV F A YF S F HKGYP 164
Cdd:PRK03356 92 IF M M F ASCTSAAVL FW GSI E iyyy ISTPP F G L E P N ---- STG A KELGLAY S L FHWG PLP WA T Y SFLSVA F G YF F F VRKMD 167
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 165 GL - V S A TL T PL L GEK AMR G PL G GAI D VLAVI A TVTGVAAT LG FGALQIN E GLHF LF NV P SNFTMQV I L I VIAT IL FTWSA 243
Cdd:PRK03356 168 VI r P S S TL V PL V GEK HAK G LF G TIV D NFYLV A LIFAMGTS LG LATPLVT E CMQW LF GI P HTLQLDA I I I TCWI IL NAICV 247
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 244 WS G ID KG IKTL S NINML L A F VV L IGL FIVG P T LY I L N T FT NGL G NYIANFFS M SLRIPSG G q K FQWL Q N WT I FYWAWW IS 323
Cdd:PRK03356 248 AC G LQ KG VRIA S DVRSY L S F LM L GWV FIVG G T SF I M N Y FT DSV G MLLMYLPR M LFYTDPI G - K GGFP Q G WT V FYWAWW VI 326
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 324 W A PFVG IF I AR V S K GRT IK E FIL G VLFVPAVVCF I FFA V F G ASAIY L Q D NH I AD I AKAATETATFATLQHYPLGFV LS LI 403
Cdd:PRK03356 327 Y A IQMS IF L AR I S R GRT VR E LCF G MVLGLTASTW I LWT V L G SNTLL L M D KN I IN I PNLIEQYGVARAIIETWAALP LS TA 406
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 404 T LLVIM I FF ---- VT SADSAT Y V L G M LSSSG --- DIN P KSF V KVS W G I IMALFA I IMIYT GG TQA IQ NLL I IAAL P FSV V 476
Cdd:PRK03356 407 T MWGFF I LC fiat VT LINACS Y T L A M STCRE vrd GEE P PLL V RIG W S I LVGIIG I VLLAL GG LKP IQ TAI I AGGC P LFF V 486
490
....*....|
gi 613366473 477 I I AMIW S LL K 486
Cdd:PRK03356 487 N I MVTL S FI K 496
PRK09950
PRK09950 putative transporter; Provisional
12-491
4.58e-71
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 235.45
E-value: 4.58e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 12 V SL VICTIF VA FGAI FP K Q LEKLTQN I TSFIALH F SWYYL L L VL VILFVCV Y ILF S R Y AS I T LGE E ge D PE F S LP SW FA M 91
Cdd:PRK09950 15 T SL LAVFFI VA ALSL FP Q Q SAAAANT I FQWVTRT F GSPVQ L F VL LAMILVL Y LAT S K Y GN I R LGE G -- K PE Y S TL SW LF M 92
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 92 LFS AG M G IGLVF W TTA E p ISHAFKLTPIHK A G - TQS A INDAMQF SFFHWGI H AWA V Y GIVA L VF AY f S FH - KGYP GL - V S 168
Cdd:PRK09950 93 FIC AG L G SSTLY W GVM E - WAYYYQTPGLNI A P r SPK A LEYSVSY SFFHWGI S AWA T Y ALAS L IM AY - H FH v RKNK GL s L S 170
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 169 ATLTPLL G E K A m R GP L G GAI D VLAV IATV TGVAAT L GFG A LQINE GL HF L FNV P S NFT M Q VIL I VIATIL F TW S AWS GID 248
Cdd:PRK09950 171 GIIAAIT G V K P - Q GP W G RLV D LMFL IATV GALTIS L VVT A ATFTR GL SA L TGL P N NFT V Q AFV I LLSGVI F CL S SYI GID 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 249 K G IKT LS NINMLL AF VVLIGLF IVGPT LY I L N TFT N GL G NYIA NF FS MSL RI - P S G GQK F Q wl Q NWT I FYW A WWIS WA P F 327
Cdd:PRK09950 250 N G LQR LS KMVGWG AF LFALLVL IVGPT EF I T N NII N SI G LTTQ NF LQ MSL FT d P M G DGS F T -- R NWT V FYW L WWIS YT P G 327
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 328 V GI F IA RVS K GR T IKE F I L G VLFVPA V V C FI FF A V FGAS AI YLQD N HIADIAKAATETATFATL Q H ---- Y P L G FVLSLI 403
Cdd:PRK09950 328 V AM F VT RVS R GR K IKE V I W G LILGSS V G C WF FF G V LESY AI HQFI N GVINVPQILNTLGGETAV Q Q llss L P A G KLFLAA 407
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613366473 404 T L LVIM IF FVTSA D SAT Y VLGML S ---- SS GD i N P KSFVKVS W GIIMA L FAIIMIY TG GT - QAIQNLLIIA ALPF S V VII 478
Cdd:PRK09950 408 Y L GIMI IF LASHM D AVA Y TMAAT S trnl RE GD - D P DRGLRLF W CVVIT L IPLSILF TG AS l DTMKTTVVLT ALPF L V ILL 486
490
....*....|...
gi 613366473 479 AMIWSLLKS L SEE 491
Cdd:PRK09950 487 IKVYGFIRW L KQD 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
