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Conserved domains on  [gi|613362683|gb|EZZ66998|]
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hypothetical protein V164_02560 [Staphylococcus aureus USA7]

Protein Classification

DUF3147 family protein( domain architecture ID 10568336)

DUF3147 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3147 pfam11345
Protein of unknown function (DUF3147); Some members in this family of proteins are annotated ...
 5-112 9.00e-37

Protein of unknown function (DUF3147); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


:

Pssm-ID: 288237  Cd Length: 111  Bit Score: 121.33  E-value: 9.00e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613362683    5 LMKFFVGGFAVLLSYIVSVTLPWKeFGGIFATFPAVFLVSMFITGMQYGDKV----AVHVSRGAVFGMTGVLVCILVTWM 80
Cdd:pfam11345   2 ILRFVLGGLAVALSYIIARTIGGK-LGGIFATFPAVYLAALIITGMEYGGKQlvsmAMHVSRGAVVGMIGDIVCVLATSL 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 613362683   81 MLHMtHMWLISIIVGFLSWFISAVCIFEAVEF 112
Cdd:pfam11345  81 FIAK-KGWLLGIIFGLIAWFVASVVIFSIVFA 111
 
Name Accession Description Interval E-value
DUF3147 pfam11345
Protein of unknown function (DUF3147); Some members in this family of proteins are annotated ...
 5-112 9.00e-37

Protein of unknown function (DUF3147); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


Pssm-ID: 288237  Cd Length: 111  Bit Score: 121.33  E-value: 9.00e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613362683    5 LMKFFVGGFAVLLSYIVSVTLPWKeFGGIFATFPAVFLVSMFITGMQYGDKV----AVHVSRGAVFGMTGVLVCILVTWM 80
Cdd:pfam11345   2 ILRFVLGGLAVALSYIIARTIGGK-LGGIFATFPAVYLAALIITGMEYGGKQlvsmAMHVSRGAVVGMIGDIVCVLATSL 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 613362683   81 MLHMtHMWLISIIVGFLSWFISAVCIFEAVEF 112
Cdd:pfam11345  81 FIAK-KGWLLGIIFGLIAWFVASVVIFSIVFA 111
 
Name Accession Description Interval E-value
DUF3147 pfam11345
Protein of unknown function (DUF3147); Some members in this family of proteins are annotated ...
 5-112 9.00e-37

Protein of unknown function (DUF3147); Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.


Pssm-ID: 288237  Cd Length: 111  Bit Score: 121.33  E-value: 9.00e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613362683    5 LMKFFVGGFAVLLSYIVSVTLPWKeFGGIFATFPAVFLVSMFITGMQYGDKV----AVHVSRGAVFGMTGVLVCILVTWM 80
Cdd:pfam11345   2 ILRFVLGGLAVALSYIIARTIGGK-LGGIFATFPAVYLAALIITGMEYGGKQlvsmAMHVSRGAVVGMIGDIVCVLATSL 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 613362683   81 MLHMtHMWLISIIVGFLSWFISAVCIFEAVEF 112
Cdd:pfam11345  81 FIAK-KGWLLGIIFGLIAWFVASVVIFSIVFA 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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