|
Name |
Accession |
Description |
Interval |
E-value |
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-794 |
0e+00 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 1281.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLG 80
Cdd:PRK12645 1 MSLLHIAILLPFIFALLIPFLYKYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPSLGINFTLYVDGLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 LLFSLLISGIGSLVVLYSIGYLSK-SEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASI 159
Cdd:PRK12645 81 LLFALLITGIGSLVVLYSIYYLSKkKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 160 YGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAP 239
Cdd:PRK12645 161 YGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIG 319
Cdd:PRK12645 241 TPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 320 AISYHYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPP 399
Cdd:PRK12645 321 AASLHYQGDDSKIYAAAITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 400 FNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPA 479
Cdd:PRK12645 401 FNGFLSKEMFFESMLNATEANLFSLDTWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKYKPEQLPKKAHEAPIGMLISPI 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 480 ILATLVIVFGLFPGILTNSIIEPATSSINHTVID----DVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQP 555
Cdd:PRK12645 481 ILASLVVVFGLFPNILTNSIIEPAVSAILPTLIDgedfDVHISLWHGFTPELLMTLGIIILGILLFLTFSKWVKLYQRFP 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 556 GKLTFNYWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALI-LLTFVTVFSVPFNINFKDVSPIRIFEVCIVILLLS 634
Cdd:PRK12645 561 KKLTLNYLYDRSLDGLEKGSYKMTRSYMTGYLRDYLVYIFSALIlLLGFVTIFSVAFSFNFKDVAPIRIYEVVLVAVLLV 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 635 AAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAG 714
Cdd:PRK12645 641 AAFAILFAKSRLTSIIMLGAVGYTVALFFVFFRAPDLALTQLVIETISVALFLLCFYHLPKLNRYEEKRSFKLTNALISI 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 715 GVGLSVIIIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQG 794
Cdd:PRK12645 721 GVGLIVTLIALSAYSNRHFESISKYYIENVYDLAGGKNMVNVILVDFRGFDTLFEISVLGIAGLGVYTMIKLRKKRGEEG 800
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
4-797 |
0e+00 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 1158.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 4 LHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLF 83
Cdd:TIGR00940 1 LHSAFILPPFAASLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWVPELGLNFTLYMDGLALLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 84 SLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQ 163
Cdd:TIGR00940 81 SLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 164 KSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVS 243
Cdd:TIGR00940 161 KSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 244 AYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISY 323
Cdd:TIGR00940 241 AYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSY 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 324 HYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGF 403
Cdd:TIGR00940 321 HYQGDDSKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGF 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 404 LSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILAT 483
Cdd:TIGR00940 401 LSKEMFFAEAITAHLVNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRPKPEDLPRKPHEPPRWMLASPDILVL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 484 LVIVFGLFPGILTNSIIEPATSSIN-HTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNY 562
Cdd:TIGR00940 481 LVLVFGLFPAQLTGPIIEPAVLSILrEGVPDDYSLSVWHGWNPPLIMTFVALSGGILLYFLMRSWLATAVEGPPVFRLNR 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 563 WYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLT-FVTVFSVPFNINFKDVSPIRIFEVCIVILLLSAAFLILF 641
Cdd:TIGR00940 561 IYERSLVTLSWKSARWTEQRLTTRRRQPQMRLLVFLILLAgASPLLLGNFEIPPLVVSGIDPAFALLWAIGIACAIGIAF 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 642 AKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVI 721
Cdd:TIGR00940 641 QAHRLASIILLGGAGLVTCITFVWFSAPDLALTQLLVEIVTTVLFLLGFYHLPKLIEEPVAAKFSLSNSAIAGGVGLSVI 720
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 613313568 722 IIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLrkkRQTQGNEV 797
Cdd:TIGR00940 721 IIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKL---RQTQGNEV 793
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-785 |
0e+00 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 629.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLhIAVILPLIFALIIPILYRFfKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLG 80
Cdd:PRK12648 1 MSLL-LLVLLPFLGALLAALLPRN-ARNAEAWLAGLVALAALVLLALLYPAVAAGEVIRAEIEWLPALGLNLSLRLDGLA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 LLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIY 160
Cdd:PRK12648 79 WLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 161 GAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPT 240
Cdd:PRK12648 159 GARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAAGDLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 241 PVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGA 320
Cdd:PRK12648 239 PVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 321 isyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPF 400
Cdd:PRK12648 319 -------------PLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLL 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 401 NGFLSKESFLETtfTASQANLFSVDtlgYLFPIIGIVGSVFTFVYSIKFIMHIFFGQyKPEQLPKKAHEVSILMLLSPAI 480
Cdd:PRK12648 386 NGFLSKEMFFAE--TLDTHLLGSLD---WLLPVAATLAGAFSVAYSLRFIHDVFFGP-PPDDLPKTPHEPPRWMRAPVEL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 481 LATLVIVFGLFPGILTNSIIEPATSSINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTF 560
Cdd:PRK12648 460 LVLLCLLVGIFPALTVGPLLAAAARAVLGGALPEYSLAIWHGFNLPLLMSLVALVGGVLLYLLLRRLFRLAARLPGPPLL 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 561 NYW-----YNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTVFSVPFNINFKDVSPIR-IFEVCIVILLLS 634
Cdd:PRK12648 540 RRLdgkriFERVLVALSRWARRLTRRLGTGRLQRQLALLVLAALVAALLPLLTGGLLTGTRPLTPVDpVFALLWLLGIAC 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 635 AAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAG 714
Cdd:PRK12648 620 ALGAAWQAKHRLAALILLGGAGLVVCLTFVWFSAPDLALTQLLVEVVTTVLLLLGLRWLPKRTPDESARLRRLRDLALAV 699
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 613313568 715 GVGLSViiiGLIAYG---NRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIK 785
Cdd:PRK12648 700 VAGLGV---AALAYAvmtRPAPDSISDFFLENALPGGGGTNVVNVILVDFRGFDTFGEITVLGIAALTVYALLR 770
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
14-796 |
0e+00 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 602.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 14 FALIIPILYRFFKRiHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSL 93
Cdd:PRK12647 1 AALAAPWLHRLFGR-NAGWLLALLPLALFLYFLSFIPEIAAGETVRGGYAWVPSLGVNLSFLLDGLSLTFALLITGIGTL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 94 VVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGG 173
Cdd:PRK12647 80 IVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 174 LSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVK 253
Cdd:PRK12647 160 LALLAGLILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVK 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 254 AGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAisyhyqgddskiy 333
Cdd:PRK12647 240 AGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGS------------- 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 334 AAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLETT 413
Cdd:PRK12647 307 ELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEAL 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 414 FTAsqanlfsvDTLGYLFPIIGIVGSVFTFVysIKFIMHI--FFGqyKPEQLPKKAHEVSILMLLSPAILATLVIVFGLF 491
Cdd:PRK12647 387 LEA--------PLWSLILTVAAVLGNALMVA--VAFLVGIkpFLG--KLVETPKHPHEAPVLMWLGPAVLAVLGLLFGLF 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 492 PGILTNSIIEPATSSINHTVIdDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQR--QPGKLTFNYWYNRSAN 569
Cdd:PRK12647 455 PFFFHAALLSPAASAVLGEPV-EVKLALWHGFNLPLLLSLLTLLLGIGLYLLRARLRAAMAAldRAAGIGPDRGYDRFMD 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 570 VIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTVFSVPFNINFKDVSPIRIFEVCIVILLLSAAFLILFAKSRLFSI 649
Cdd:PRK12647 534 GLVRVAEWQTRVLQNGRLRNYLTVTFLTAAALLGYTLVRYGEFPGDPSFPDVTFHEWALALIIVAGALATVTTRSRLTAI 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 650 IMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYnEKRSFQLTNALIAGGVGLSVIIIGLIAYG 729
Cdd:PRK12647 614 VSLGVQGFAVALIFILFGAPDLAMTQFLIETLSVILLVLVLYRLPSFLDL-SPPGQRLRDAAIALGCGVGMTLLLLAVTQ 692
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613313568 730 NRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNE 796
Cdd:PRK12647 693 VPFDDELGDYFAAYSKPIAHGRNVVNVILVDFRALDTLGEIAVLAVAALGVYALLKLRAGRERRAAA 759
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-790 |
0e+00 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 575.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLG 80
Cdd:PRK12646 1 MSLVYLLIAILVIMAMILLTSKRRALAKYAGYIALVAPIISSIYFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 LLFSLLISGIGSLVVLYSIGYLSKS-EQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASI 159
Cdd:PRK12646 81 LMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 160 YGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAP 239
Cdd:PRK12646 161 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMAAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGI- 318
Cdd:PRK12646 241 TPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIg 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 319 GAISYHYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVP 398
Cdd:PRK12646 321 GGYAQHQQDAIASIYVFVLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 399 PFNGFLSKESFLETTFTASQANLFSVdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSP 478
Cdd:PRK12646 401 FLNGFLSKEMFLDALTQTGQLSQFSL-ISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDSKVFTKKNIHEPWLFSLPS 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 479 AILATLVIVFGLFPGILTNSIIEPATSSINH--TVIDDVEFHM--FHGLTPAFLSTLVIYILGILLIVtFSYWVKLLQRQ 554
Cdd:PRK12646 480 LILMVLVPVIFFVPNIFGKGIIVPALRSVSGgnHQVDQLAPHVsqWHGFNIPLLLTIIIILLGSVLAI-KVDWKKVFTGK 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 555 PGKLTFNYWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTVFSVPF-NINFKDVSPIRIFEVCIVILLL 633
Cdd:PRK12646 559 IRQISISKSYEMVYRHFEKFSTKRFKRVMQNRLNQYIIMTLGIFMIIIGYGYIRIGLpKVHQLHVSEFGPLEIILAIVTV 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 634 SAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIA 713
Cdd:PRK12646 639 TIGISLIFIRQRLTMVILNGVIGFVVTLFFIAMKAPDLALTQLVVETITTILFIVSFSRLPNVPRSNANKKREIIKIIVS 718
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613313568 714 GGVGLSVIIIGLIAYGNRHFESISKFYqEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKR 790
Cdd:PRK12646 719 LLMALIVVSLIFITQQTDGLSSISDFY-LKAYKLTGGKNIVNAILGDFRALDTLFEGLVLIITGLGIYTLLNYKDRR 794
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
6-791 |
0e+00 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 544.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 6 IAVILPLIFALIIPILYRFFKRiHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSL 85
Cdd:PRK12649 9 LAIFLPFILAWTVPVLEKVLKQ-RIGWFAAAIAFTSFALIAQVAPEVIHGTIITGSISWLPSAGVEFSIYADGLAVLIGL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 86 LISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKS 165
Cdd:PRK12649 88 IASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKS 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHA---SEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPV 242
Cdd:PRK12649 168 LLITAGGGLFMFAGFLLLHVITGTYDIATILQDSeliENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPV 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 243 SAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIgaIS 322
Cdd:PRK12649 248 SAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGY--TT 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 323 YHYQGddskiyaAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNG 402
Cdd:PRK12649 326 YHEPG-------LGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 403 FLSKESFLETTFTASQANLFsvdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILA 482
Cdd:PRK12649 399 FLSKEMFYETSVEMGALIGG---PFTIIIPAVAVLGGVFTFAYSIKLIDGIFLGERTHDHLPHHIHEAPYVMLIPAAFLA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 483 TLVIVFGLFPGILTNSIIEPATSSInhtVIDDVEFH--MFHGLTPAFLSTLVIYILGILLIVTF---SYWVKLLQRQPGK 557
Cdd:PRK12649 476 GLVILFGLVPSIPIHNIIEPATSGI---VLETAHLHvkLWHGFTPALMMTIITFILGLLIYTKYdaiAAWQDRFNAKYPW 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 558 LTFNYWYNRSANvipnySEKMTNSYVTDYSRNNLVIIFGALILLTFVTVFSVPFNINFKDVSPIRI------FEVCIVIL 631
Cdd:PRK12649 553 ISVNYYYDAIVN-----NAKGNAHKFASFAQPGPIKLYIKATLLLMIALIFIPLYMLGGDLLPAGLnfdippYEAVLMLL 627
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 632 LLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNAL 711
Cdd:PRK12649 628 MIVAALAAALLPRYLPAVIALSALGYLVSLLFIYLKAPDLALTQILVETLSTIIFLLVIIKIPQKFKEKIPKGKLLRDIL 707
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 712 IAGGVGLSVIIIGLIAYGN--RHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKK 789
Cdd:PRK12649 708 ISGVVSFGVLIVLLNATQGivPPFESLSHYFIEKSVALTGGHNVVNVILVDFRGYDTLGEISVLCLAALGVYNLIHSRGE 787
|
..
gi 613313568 790 RQ 791
Cdd:PRK12649 788 KV 789
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-560 |
6.92e-179 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 526.64 E-value: 6.92e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMP--HFGMNFDLYLDG 78
Cdd:COG1009 1 LQLLWLIPLLPLLGALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVELYTWIPvgSLGLDFGFRLDG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 79 LGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQAS 158
Cdd:COG1009 81 LSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEA 238
Cdd:COG1009 161 RRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGI 318
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 319 GAISyhyqgddskiyaaaftAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVP 398
Cdd:COG1009 321 GAYV----------------AALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIP 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 399 PFNGFLSKESFLETTFTAsqanlfsvDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEqLPKKAHEVSILMLLSP 478
Cdd:COG1009 385 PFAGFFSKEAILEAALEA--------GGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPK-TPKHPHESPWLMTLPL 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 479 AILATLVIVFGLFPGILTNSIIEPATssinhtvIDDVEFHMFHGLTPAFLStLVIYILGILLIVTFsYWVKLLQRQPGKL 558
Cdd:COG1009 456 VVLAVLSLVLGLLLPGLLEGLLAPAA-------VLGGELHLAHGLLLNALP-LLLSLLGIALGYLL-YLKRPLPALAERL 526
|
..
gi 613313568 559 TF 560
Cdd:COG1009 527 KP 528
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
12-788 |
7.32e-172 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 520.64 E-value: 7.32e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 12 LIFALIIPILYRFFKRihLGWFVLP-VPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGI 90
Cdd:PRK12644 9 AVAALLAPLLVRRLGR--RAFYVLAlVPAAAFVWVLAQWPAVLAGGAPTEVVPWIPSLGLDLAFRLDALAALMSLLVLGV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 91 GSLVVLYSIGYLSKSE-QLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIIT 169
Cdd:PRK12644 87 GALVLLYCARYFDDDEpRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVT 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 170 VFGGLSLLGGIILLAIPTQSFSIQYMIQHASeiqNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSA 249
Cdd:PRK12644 167 TAGGLAMLVGIIILGQAAGTYRLSELLADPP---TGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 250 TMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAisyhyqgdd 329
Cdd:PRK12644 244 AMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGT--------- 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 330 skiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESF 409
Cdd:PRK12644 315 ----RDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 410 LETtftasqanLFSVDTLGYLFPI--IGIV-GSVFTFVYSIKFIMHIFF--GQYKPEQLPKKAHEVSILMLLSPAILATL 484
Cdd:PRK12644 391 LEA--------VLHDGALGPAGPVvlAGIVlGSILTVAYSLRFLWGAFArkPGAFPSVAVTEMHRPSPLFLAPPAVLAVL 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 485 VIVFGLFPGiLTNSIIEPATSSINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWY 564
Cdd:PRK12644 463 GLVLGLLPA-PLDALLAPYADTVPAAGGEPYHLALWHGFTLPLLLSAVVLAAGAALFWARSRVERLQARVPALGNADRAY 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 565 NRSANVIPNYSEKMTNSyvtdYSRNNLVIIFGAlILLTFVTVFSVPFNINFKDVSPIRIFE----VCIVILLLSAAFLIL 640
Cdd:PRK12644 542 DATLRALDDLSVRLTGS----TQRGSLPFYLGV-ILVTLVVVPGAALALGTRWPPDVRLWDspaqVVVGLVIIAAALLAT 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 641 FAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSV 720
Cdd:PRK12644 617 RARNRLAAVLLVGVTGYGCAVIFALHGAPDLALTQFLVETITLVVFVLVLRRLPAEFSDRPLRKRRLVRAALAVAVGATV 696
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 613313568 721 IIIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRK 788
Cdd:PRK12644 697 TVLAVFAMAARVAEPISLLFPDLAYEFGHGKNVVNVLLVDIRAWDTMGEISVLLVAATGVASLVFRNR 764
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
6-788 |
2.24e-145 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 451.80 E-value: 2.24e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 6 IAVILPLIFALII-PILYRFFKRiHLGWfVLPVPIVIF-IYMLTLIKTTMSGNTVMKTLNWMPHFG-----MNFDLYLDG 78
Cdd:PRK12650 2 LAVLALAALAVVLaPPLVRVLDR-KAGW-PLAAIFVAAaGLLLKELPPILDGDALTWSVTWIPDLLgngvdVNLALRADA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 79 LGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISfwRERQAS 158
Cdd:PRK12650 80 LSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGSGG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEA 238
Cdd:PRK12650 158 EAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGI 318
Cdd:PRK12650 238 ITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 319 GAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVP 398
Cdd:PRK12650 318 GT-------------PFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVP 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 399 PFNGFLSKESFLETTFTASQANlfsvdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEqlpKKAHEVSILMLLSP 478
Cdd:PRK12650 385 PLFGFVSKEGMLTAFLEAPGGN-----AGVVLLLVGAALGAVFTFAYSARLVLGAFVDGPRDM---SHVKEAPVSLWLPA 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 479 AILATLVIVFGLFPGILTnsiiEPATSSINHTVIDDVEFH--MFHGLTPAFLSTLVIYILGILLIVTFS-YWVKLLQRQP 555
Cdd:PRK12650 457 ALPGALSLPLGLVPGLLD----APVSAAATAAAGEHAHTHlaLWHGVNTPLLISLLVIVLGILGVLFRKpLWEPLESRPL 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 556 GKLTFNYWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTVFSVPfNINFKDVSPIRIFEVCIVILLLSA 635
Cdd:PRK12650 533 APFSGLDILDAVRDRIIAFGRFVGRMADSMSPRRHLVIPFLLLILLAGFGLIGVD-GLPPRVGGIDRWIDLVLLAIIALG 611
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 636 AFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTnALIAGG 715
Cdd:PRK12650 612 VIALVRTRTRLAAVVLVGVVGVGVTLQMLTLGAPDVALTQLLVEALTVVVMMLVLRRQPRNFHREKTRRRRFA-VLVAVL 690
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 613313568 716 VGLsVIIIGLIAYGNRH-FESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRK 788
Cdd:PRK12650 691 AGL-ATFLGVWALTGRHeRSELAEWYLNNGPEITGGDNVVNTILVEFRALDTLGELSVLGMAGVVIAALLLSRP 763
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-540 |
1.05e-85 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 284.74 E-value: 1.05e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGW---------FVLPVpiVIFIYMLTLIKTTMSGNTvmktLNWMP--HFG 69
Cdd:PRK06590 2 MNLLWLIVLLPLIGALILGLFGRRIGEKWAHLvgtglvglsALLSL--VVFFDFLLGGGRAFSQTL----WTWISvgDFD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 70 MNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLI 149
Cdd:PRK06590 76 VDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 150 SFWRERQASIYGAQKSLIIT----VFGGLSLLGGIILlaipTQSFSIQYMIQHASEIQ--NSPFFIFAMILIMIGAFTKS 223
Cdd:PRK06590 156 GFWYKKPSAGAAAMKAFIVNrvgdVGLALGIFLLFAE----FGSLNYDEVFAAAPQFFglGWSALTLICLLLFIGAMGKS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 224 AQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAF 303
Cdd:PRK06590 232 AQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAY 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 304 STVSQLGMIMAMLGIGAisyhyqgddskiYAaaftAAIFHLINHATFKGALFMITGAVDHST-GTRDVKKLGGLLTVMPI 382
Cdd:PRK06590 312 STMSQLGYMFLALGVGA------------YA----AAIFHLMTHAFFKALLFLGAGSVIHAMhHEQDIRKMGGLRKKMPV 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 383 SFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANLFsvdtlgylfpIIGIVGSVFTFVYSIKFIMHIFFGqyKPEQ 462
Cdd:PRK06590 376 TYATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLF----------VAGLVGAFLTAFYSFRLIFLVFHG--KEKE 443
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 613313568 463 LPKKAHEVSILMLLSPAILATLVIVFGLFpgiltnsIIEPATSSINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILL 540
Cdd:PRK06590 444 KIHHPHESPAVMTLPLIVLAVLSVFAGAL-------IVPPFLGVLPLTTELAHGEAEHHLPVWVALLPLVVALAGIAL 514
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-453 |
1.09e-79 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 262.78 E-value: 1.09e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIA-VILPLIFALIIPILYRFfKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGL 79
Cdd:COG0651 1 MSHLLILpVLLPLLAAALLLLLGRR-RRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWPAPFGIVLVADRLSA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 80 GllFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQAsI 159
Cdd:COG0651 80 L--FLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEA-L 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 160 YGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIqNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAM-EA 238
Cdd:COG0651 157 RAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL-DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLhSATMVKAGLYLIARM-TPIFAASQGWIWTVTL--VGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAM 315
Cdd:COG0651 236 PSPVSALL-SGLLTKVGVYAILRVlTLLFGADPALFLGTLLlvLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 316 LGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMA 395
Cdd:COG0651 315 LGLGT-------------PLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALA 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 613313568 396 GVPPFNGFLSKESFLETTFTASQanlfsvdtlgYLFPIIGIVGSVFTFVYSIKFIMHI 453
Cdd:COG0651 382 GLPPLSGFVSKWLLLQAALEAGA----------WLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
2-540 |
4.49e-75 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 255.67 E-value: 4.49e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 2 SLLHIAVILPLIFALIIPILYRFFKRIHLGWF-VLPVPIVIFIYMLTLIKTTMSGNTVMKTLN---WMP--HFGMNFDLY 75
Cdd:TIGR01974 1 NLIFLIVFLPLIGFLIAGLFGRRIGERVSGIIgIGSVGLSAALSAFVFVDFFLNGEGEAFTQSlfpWISvgGFQVDFGLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 76 LDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER 155
Cdd:TIGR01974 81 LDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 156 QASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIfAMILIMIGAFTKSAQFPFYIWLPDA 235
Cdd:TIGR01974 161 PSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGAFFSALTL-ICLLLFIGAMGKSAQLPLHTWLPDA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 236 MEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAM 315
Cdd:TIGR01974 240 MEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 316 LGIGaisyhyqgddskiyaaAFTAAIFHLINHATFKGALFMITGAVDHST-GTRDVKKLGGLLTVMPISFTITVITALSM 394
Cdd:TIGR01974 320 LGVG----------------AYAAAIFHLMTHAFFKALLFLGAGSVIHAMhHEQDIRKMGGLRKKMPVTYITFLIGSLAL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 395 AGVPPFNGFLSKESFLETTFTASqanlfsvdTLGYLFpIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPkKAHEVSILM 474
Cdd:TIGR01974 384 IGFPGFAGFFSKDLILEAAFASG--------THSFLF-VAGLIGAFLTAFYSFRLIFMVFHGKERHEADA-HPHESPLVM 453
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 613313568 475 LLSPAILATLVIVFGLFpgiltnsiIEPATSSINHTVIDDVEFHMFHGLTPAF--LSTLVIYILGILL 540
Cdd:TIGR01974 454 LLPLIVLAVGSVFAGFF--------IVPLFEFLKGVLPTSAEPALEHHHVPALeiWSPTAVAILGILL 513
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
84-487 |
2.32e-71 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 242.19 E-value: 2.32e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 84 SLLISGIGSLVVLYSIGYLSKS-------EQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWrERQ 156
Cdd:PRK06525 81 GFVVVLLGLLVTLYSTGYMSPGnrehpvhEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYY-QSP 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 157 ASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQnspffIFAMILIMIGAFTKSAQFPFYIWLPDAM 236
Cdd:PRK06525 160 KALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLK-----YLVFLGILFAAWGKSAQLPFYSWLPDAM 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 237 EAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLV-GLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAM 315
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVmAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 316 LGIGAISyhyqgddskiYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMA 395
Cdd:PRK06525 315 LSLAILG----------SRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAIT 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 396 GVPPFNGFLSKESFLETTFTASqanlfSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGqyKPEQLPKKAHEVSILML 475
Cdd:PRK06525 385 GVPPFNGFFSKFPIFAAGFELS-----VEYWILLPAMVLLLIESVASFAWFLRWFGRVVFG--EPSEAVADAAPLPGSMK 457
|
410
....*....|..
gi 613313568 476 LSPAILATLVIV 487
Cdd:PRK06525 458 LVLIVLIVMSLV 469
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
86-419 |
1.29e-64 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 228.75 E-value: 1.29e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 86 LISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKS 165
Cdd:PRK07376 99 LVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASE------IQNSPFFIFAmILIMIGAFTKSAQFPFYIWLPDAMEAP 239
Cdd:PRK07376 179 FVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSElvssgaVSGWLALLLC-ILVFLGPMAKSAQFPLHVWLPDAMEGP 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLG-MIMAMlGI 318
Cdd:PRK07376 258 TPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGyMVMAM-GC 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 319 GaisyhyqgddskiyaaAFTAAIFHLINHATFKGALFMITGAVDHSTG---------TRDVKKLGGLLTVMPISFTITVI 389
Cdd:PRK07376 337 G----------------AYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEevvghdpvlAQDMRLMGGLRKYMPITAITFLI 400
|
330 340 350
....*....|....*....|....*....|
gi 613313568 390 TALSMAGVPPFNGFLSKESFLETTFTASQA 419
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPA 430
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-495 |
1.54e-60 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 212.82 E-value: 1.54e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFAliiPILYRFFKRIHLGWFVLP-VPIVIFIYMLTLIKTTMSGNTVMKTL-NWMPHFGMNFDLYLDG 78
Cdd:PRK08375 3 SHLLPLLVAVPLLAA---ALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVgGWPPGIGIELRADSLS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 79 LGllFSLLISGIGSLVVLYSIGYLSKSEQLgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQAs 158
Cdd:PRK08375 80 AL--FLLVTSILAIAALLYAIGYGEHRQTR--FYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRA- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSiqyMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEA 238
Cdd:PRK08375 155 LAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLN---MADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLHSATMVKAGLYLIARM-----TPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIM 313
Cdd:PRK08375 232 APPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYIL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 314 AMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALS 393
Cdd:PRK08375 312 LGLALLT-------------PLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 394 MAGVPPFNGFLSKESFLETtftasqanlfSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQlPKKAHEVSIL 473
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVVG----------AVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGS-EAPKQEAPLG 447
|
490 500
....*....|....*....|..
gi 613313568 474 MLLSPAILATLVIVFGLFPGIL 495
Cdd:PRK08375 448 MLAPSLALALLSLLLGIYAGPL 469
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-519 |
1.84e-58 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 208.03 E-value: 1.84e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLpVPIVIFIYMLTLIKTTMSGNTVMKTL-----NWMPHFGM-NFDL 74
Cdd:PRK08376 4 EHLPPLLIIIPLFGAFSMPIVSLLGGKAREIWAVL-ISFLTLIVALLVFYEVWNNGTIVYVLgaespTLTLPFGSgGFPI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 75 YLDGLGLLFSLLISGIGSLV----VLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLIS 150
Cdd:PRK08376 83 RIIWEVDLFGAFMALIATIVsflaVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 151 FWRERQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMiqhASEIQNSPFF--IFAMILIMIGAFTKSAQFPF 228
Cdd:PRK08376 163 FRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL---AVKMSENPTVvaKIALALFIAGLAMKSGAVPV 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 229 YIWLPDAM-EAPTPVSAYLHSATMvkAGLYLIARMT-PIFAASQGWI---WTVTLVGLITLFWASLNATKQQDLKGILAF 303
Cdd:PRK08376 240 HMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARVLfSIYGPAINLAtvgWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 304 STVSQLGMIMAMLGIGAISYHyQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPIS 383
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGLAALG-DPAMASYGEIALAGGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKT 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 384 FTITVITALSMAGVPPFNGFLSKESFLETTFtasqanlfsvdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQl 463
Cdd:PRK08376 397 TIAFLIGAAAIVGLPPFNGFASKWLIYESSA-----------LFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKV- 464
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 613313568 464 pKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSInhtvIDDVEFHM 519
Cdd:PRK08376 465 -MNVKEPPKPMLVPMLILAIAIIGMGLFPWQISDKLMAPAAKAL----EDQGGYIS 515
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-511 |
5.12e-58 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 205.70 E-value: 5.12e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPIL----YRFFKRIHLGWFVlpVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYL 76
Cdd:COG1008 3 MPLLSLLILLPLLGALLLLLLprrnARLARWVALAVSL--LTLLLSLYLLAGFDPGTGGFQFVESYPWIPSLGISYHLGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 77 DGLGLLFSLLISGIGSLVVLYSIGylSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW--RE 154
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWN--EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggER 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 155 RqasIYGAQKSLIIT----VFGGLSLLGGIILLAIPTqsFSIQYMIQHAseiQNSPFFIFAMILIMIGAFTKSAQFPFYI 230
Cdd:COG1008 159 R---IYAAIKFFLYTlagsLLMLVAILALYFLAGALT--FDIAELAAAP---LPLTAQLLLFLAFFIAFAVKVPMFPFHT 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 231 WLPDA-MEAPTPVSAyLHSATMVKAGLYLIARMT-PIF-AASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVS 307
Cdd:COG1008 231 WLPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFAlPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 308 QLGMIMamLGIGAISyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTIT 387
Cdd:COG1008 310 HMGFVL--LGIFALN-----------PLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALF 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 388 VITALSMAGVPPFNGFLSKesFLetTFTASqanlFSVDTlgyLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKK- 466
Cdd:COG1008 377 LLAALASLGLPGTSGFVGE--FL--VLLGA----FQVNP---WLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPd 445
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 613313568 467 --AHEVSILmllspAILATLVIVFGLFPGILTNsIIEPATSSINHTV 511
Cdd:COG1008 446 lnPRELAVL-----APLAALILLLGLYPQPLLD-LIEPSVEALLARV 486
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-508 |
3.39e-56 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 201.35 E-value: 3.39e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFK--RIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTL--NWMPHFGMnfDLYL 76
Cdd:PRK12667 3 MDIVGLTPILLVLFAFLLPLLSILLKgnRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLfgGWPAPIGI--VYEV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 77 DGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQ 156
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 157 ASIYGAQKSLII-----TVFGGLSLLGGIIL----LAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFT-KSAQF 226
Cdd:PRK12667 161 DAVEAAIKYALIgavgtTLYFLALAFLYATFgtlnMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTiKAAIF 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 227 PFYIWLPDAM-EAPTPVSAYLhSATMVKAGLYLIAR-MTPIFAASQGWIWTVTLVGLITLFWASLNA-------TKQQDL 297
Cdd:PRK12667 241 PNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRfLYTIFGISPSLIDFRAALSPILIILGAVSAiigalmmVVQKDV 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 298 KGILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLL 377
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGT-------------QLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLG 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 378 TVMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQanlfsvdtlgYLFPIIGIVGSVFTFVYSIKFIMHIFFGq 457
Cdd:PRK12667 387 RKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGF----------YLPALVLLIASAISLVGYFRAWYSLFFG- 455
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 613313568 458 yKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSIN 508
Cdd:PRK12667 456 -KPKSGEEVEHKESPSMSVVILVLALAVLILGILALFLPEILDSLIEPAAN 505
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
83-548 |
1.22e-55 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 203.20 E-value: 1.22e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQ-----LGNFYCyllLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFwRERQA 157
Cdd:PRK06521 85 FLLVISLLGAAASLYSLGYFREYEGkgpgaMGFFYN---LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA-NHREA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 158 SIYGAQK-SLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASeiqnSPFFIF-AMILIMIGAFTKSAQFPFYIWLPDA 235
Cdd:PRK06521 161 EIRRAGFlYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHL----SPFWASlVFLLALFGFGAKAGLVPLHVWLPRA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 236 M-EAPTPVSAyLHSATMVKAGLYLIARMTPIFAASQGWIWTVTL--VGLITLFWASLNATKQQDLKGILAFSTVSQLGMI 312
Cdd:PRK06521 237 HpAAPSHVSA-LMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVlaLGAISAVLGVLYALAEHDLKRLLAYSTIENIGII 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 313 MAMLGIGAIsyhYQGDDSKIYAA-AFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITA 391
Cdd:PRK06521 316 FVGLGLAMV---FIAYGMPLLAAlALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGC 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 392 LSMAGVPPFNGFLSKESFLETTFTASQANLFsvdTLGYLFPIIG----IVG--SVFTFVysiKFIMHIFFGQYKPEQLpK 465
Cdd:PRK06521 393 LAISALPPLNGFVSEWLLLQSLLSSPGLPQW---GLKLAVPIAAamlaLTAalAAMCFV---KFYGITFLGRPRSEKA-E 465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 466 KAHEVSILMLLSPAILATLVIVFGLFPGILTNsIIEPATSSINHTVIddVEFHMFHGLTP-----AFLSTLVIYILGILL 540
Cdd:PRK06521 466 EAHEVPRWMRAAMLLLAALCVLLGLLPGWVAP-VIDPVAQALVGTPL--VTVASGLLLVPvsssrASYSPLLFLLLLLAL 542
|
....*...
gi 613313568 541 IVTFSYWV 548
Cdd:PRK06521 543 ALLPLYWL 550
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
84-417 |
1.67e-55 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 203.97 E-value: 1.67e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 84 SLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQ 163
Cdd:CHL00025 97 LILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQ 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 164 KSLI------------ITVFGGLsllggiillaipTQSFSIQYMIQHASEI-----QNSPFFIFAMILIMIGAFTKSAQF 226
Cdd:CHL00025 177 KAFVtnrvgdfglllgILGFYWI------------TGSFEFRDLFEIFNNLiynneVNLLFATLCAFLLFLGPVAKSAQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 227 PFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTV 306
Cdd:CHL00025 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTM 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 307 SQLGMIMAMLGIGaiSYhyqgddskiyaaafTAAIFHLINHATFKGALFMITGAVDHS----TGTRDVKK-----LGGLL 377
Cdd:CHL00025 325 SQLGYMMLALGIG--SY--------------RAALFHLITHAYSKALLFLGSGSVIHSmepiVGYSPDKSqnmvlMGGLR 388
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 613313568 378 TVMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTAS 417
Cdd:CHL00025 389 KYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYS 428
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-491 |
6.06e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 199.79 E-value: 6.06e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIP-ILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGL 79
Cdd:MTH00211 1 MNTIFNSGFLLILILLLLPlLLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 80 GLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASI 159
Cdd:MTH00211 81 SIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDAN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 160 YGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQymiqhaSEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAP 239
Cdd:MTH00211 161 TAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEIS------QLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIG 319
Cdd:MTH00211 235 TPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 320 AIsyhyqgddskiyaaafTAAIFHLINHATFKGALFMITGAVDHST-GTRDVKKLGGLLTVMPISFTITVITALSMAGVP 398
Cdd:MTH00211 315 QP----------------QLAFLHICTHAFFKAMLFMCSGSIIHGLnNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFP 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 399 PFNGFLSKESFLETTFTaSQANLFSVdtlgylfpIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKaHEVSILMLLSP 478
Cdd:MTH00211 379 FLSGFFSKDLILESMNG-SYLNAWAL--------LLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPI-NENYKLLKNPL 448
|
490
....*....|...
gi 613313568 479 AILATLVIVFGLF 491
Cdd:MTH00211 449 KRLALGSILAGFI 461
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
85-564 |
2.10e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 190.22 E-value: 2.10e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 85 LLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQK 164
Cdd:MTH00210 87 IVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIK 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 165 SLIITVF--GGLSLLGGIILLAIPTQSFSIQYMIqhASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPV 242
Cdd:MTH00210 167 AMLINRVgdIGLVLAMIMILKEFGTLEFSTISSL--LVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPV 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 243 SAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLG-MIMamlgIGAI 321
Cdd:MTH00210 245 SALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGyMVM----VCGI 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 322 SYhyqgddskiyaaaFTAAIFHLINHATFKGALFMITGAVDHSTG-TRDVKKLGGLLTVMPISFTITVITALSMAGVPPF 400
Cdd:MTH00210 321 SN-------------YSTSLFHLMNHAFFKALLFLSAGSVIHAVSdEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYL 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 401 NGFLSKESFLETTFtasqanlfsvDTLGYLFPI-IGIVGSVFTFVYSIKFIMHIFFGQYKPEQLP-KKAHEVSILMLLSP 478
Cdd:MTH00210 388 TGFYSKDLILELTY----------DKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNSKKEVfIGVHESSWNITFPL 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 479 AILAtlviVFGLFPGILTNSIIepaTSSINHTVIDDvefhmFHGLTPAFLStLVIYILGILLIVTFSYWVKLLQRQPGKL 558
Cdd:MTH00210 458 LLLA----FGSIFVGYLGKEVV---LSNVIPPIVPN-----SIKMIPLLFS-LLGALLAFVIYNSMVFLIKISRRGVSIR 524
|
....*.
gi 613313568 559 TFNYWY 564
Cdd:MTH00210 525 LYHVIY 530
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
85-438 |
1.04e-49 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 186.32 E-value: 1.04e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 85 LLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQK 164
Cdd:MTH00032 87 LVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIK 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 165 SLIITVF--GGLSLLGGIILLAIPTQSFSI-------------QYMIQHASEIQNSPFFIFAmILIMIGAFTKSAQFPFY 229
Cdd:MTH00032 167 AIVVNRVgdVGVILGMVLIYKTIGSLDFLTfnggsvgsgimdrGYYGGGAYESPLAPFAIIG-ILLLIGCIGKSAQLGLH 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 230 IWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQL 309
Cdd:MTH00032 246 TWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQL 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 310 GMIMAMLGIgaisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGT--RDVKKLGGLLTVMPISFTIT 387
Cdd:MTH00032 326 GYMVLIIGI---------------EGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdeQDMRKMGGLIHSIPFTYTMM 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 613313568 388 VITALSMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVG 438
Cdd:MTH00032 391 LIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGIPFGSSLLKIQGDIGIKK 441
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
9-499 |
1.12e-49 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 185.20 E-value: 1.12e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 9 ILPLIFALIIPILYRFFK-RIHLGwfvLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMphfGMNFDLYLDGLGLLFSLLI 87
Cdd:PRK08668 5 LLLLTPLIGSVLAYLLKKiNEKIG---VIGNALPLLFLIKLYFTLKVGTGEKLTLFFG---GFKLTFTLTHLSWFFAMIS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 88 SGIGSLVVLYSIGYLSKSEqlGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRE--RQASIygaqKS 165
Cdd:PRK08668 79 LLVIFSVAFFMVSEKTKND--AYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKesRKASL----KY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAM-EAPTPVSA 244
Cdd:PRK08668 153 FVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 245 YLhSATMVKAGLYLIARMTPIFAASQGWIWTVT------------LVGLITLFWASLNATKQQDLKGILAFSTVSQLGMI 312
Cdd:PRK08668 233 VL-SGQLSKLGAYGFLLVLYVLPGTKLFSEFGTyrgvplfnyilaWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 313 MAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITAL 392
Cdd:PRK08668 312 LVGLGLGT-------------SLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFTFAMYLVAII 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 393 SMAGVPPFNGFLSKESFLEttfTASQANLFSVDTLGYLfpiigivGSVFTFVYSIKFIMHIFFGQYKPEQlpKKAHEVSI 472
Cdd:PRK08668 379 SLAGIPPMSGFASKWLIFE---ALISKGMPITAFMAFF-------GSIGSFLYVFRPLAGVFLGQLPSDH--KDVKEAPL 446
|
490 500
....*....|....*....|....*..
gi 613313568 473 LMLLSPAILATLVIVFGLFPGILTNSI 499
Cdd:PRK08668 447 PMLIPMAILVLLNVVFGVAPGLVLQEI 473
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
6-500 |
1.23e-49 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 184.90 E-value: 1.23e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 6 IAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIY-MLTLIKTTMSGNTV-MKTLNWMP------HFGMNFDLYLD 77
Cdd:MTH00020 4 LVLFLPLLGALLSGLFGRKIGEKGAGILTSSCLIISLSWsFLIFYEILFNSSTTyIKLWRWLDsdlltvYFGLQFDGLVA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 78 GLGllfsLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQA 157
Cdd:MTH00020 84 IML----LVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 158 SIYGAQKSLIITVFGGLSLLGGIILLAIPTQSF---SIQYMIQHAseiqNSPFFIFAMILIMIGAFTKSAQFPFYIWLPD 234
Cdd:MTH00020 160 ANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLdfsSVFNMVVSA----PSSDITLICLFLFIGAVGKSAQLGLHTWLPD 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 235 AMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMA 314
Cdd:MTH00020 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 315 MLGIgaisYHYqgddskiyaaafTAAIFHLINHATFKGALFMITGAVDHS-TGTRDVKKLGGLLTVMPISFTITVITALS 393
Cdd:MTH00020 316 ACGL----SHY------------SISLFHLMNHAFFKALLFLSAGSVIHAlSDEQDMRKMGGLISFLPLTYIFFLIGSLS 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 394 MAGVPPFNGFLSKESFLETTFtaSQANLfsvdTLGYLfpiIGIVGSVFTFVYSIKFIMHIFFG--QYKPEQLpKKAHEVS 471
Cdd:MTH00020 380 LMGFPYLTGFYSKDLILELAF--GQYYL----IFAYW---LGCFSALLTAFYSIRLIYLTFLSntNLKKAVF-FHLHEGD 449
|
490 500
....*....|....*....|....*....
gi 613313568 472 ILMLLSPAILAtlviVFGLFPGILTNSII 500
Cdd:MTH00020 450 WNLLLPLGILA----LGSIFVGYLAKEMI 474
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-415 |
3.44e-48 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 180.74 E-value: 3.44e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKrIHLGWFVLPVPIVIFI-YMLTLIKTTMSGNTVMKTL--NWMPHFGMNFDLYLD 77
Cdd:MTH00004 1 MTLLLNTTTLLTLLILLTPILLPLLS-KNLKNSPTTIKTTVKLaFLISLIPLTLFLNSGTESIttNWPWIFTTTFNIPIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 78 GLGLLFSLLISGIgSLVVLYSI-----GYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW 152
Cdd:MTH00004 80 FKLDQYSLMFLPI-ALFVTWSIlefstWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWW 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 153 RER--------QASIY------GaqksLIITvfgglsllggIILLAIPTQSFSIQYMIqhaseIQNSPFFIFAMILIMiG 218
Cdd:MTH00004 159 SGRaeantaalQAIIYnrigdiG----LILS----------MAWLAMTLNTWEIQQLF-----SPTQTPTLPLLGLIL-A 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 219 AFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLK 298
Cdd:MTH00004 219 ATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIK 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 299 GILAFSTVSQLGMIMAMLGIGAIsyhyqgddskiyaaafTAAIFHLINHATFKGALFMITGAVDHST-GTRDVKKLGGLL 377
Cdd:MTH00004 299 KIIAFSTSSQLGLMMVTIGLNQP----------------QLAFLHISTHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGLQ 362
|
410 420 430
....*....|....*....|....*....|....*...
gi 613313568 378 TVMPISFTITVITALSMAGVPPFNGFLSKESFLETTFT 415
Cdd:MTH00004 363 KTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNT 400
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-493 |
5.66e-47 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 177.62 E-value: 5.66e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFfKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLnWMPHFGMNFDLYLDGLG 80
Cdd:PRK08667 2 LAGLFLGAILLLLAAAVIPLVFRH-KRKRVWQSVLWLVIAIALLLFAGSLQLFTGNPLDIPL-WGIAPGLDITFHIDRLA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 LLFSLLISGIGSLVVLYSIGYLS--KSEQLGNFYCYLL-LFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQA 157
Cdd:PRK08667 80 AFFIILIGLVSLCVAIYSLGYNEhmSSNERANLLSALTaLFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 158 SIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQyMIQHASEIQNSPFfifamILIMIGAFTKSAQFPFYIWLPDAME 237
Cdd:PRK08667 160 TQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS-PLGASAGILSLVF-----LLLFLGFGIKAGIIPFHKWLPYAHP 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 238 A-PTPVSAyLHSATMVKAGLY-LIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAM 315
Cdd:PRK08667 234 AsPSNVSA-LMSGVMLKVAVYgLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMG 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 316 LGIGAIsYHYQGDDSkIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMA 395
Cdd:PRK08667 313 IGLYVI-FGVYGLDT-LALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 396 GVPPFNGFLSK----ESFLET-TFTASQANLFSVDTLGyLFPIIGIVgSVFTFVysiKFIMHIFFGQYKPEQlPKKAHEV 470
Cdd:PRK08667 391 ALPPFNGFASElllyESFFQSfSVADPLIKILLFSVLA-IFALTSAL-AAACFV---KAFGITFLAMPRSQE-ARSAKEV 464
|
490 500
....*....|....*....|...
gi 613313568 471 SILMLLSPAILATLVIVFGLFPG 493
Cdd:PRK08667 465 SKPMLIGPAVLAVACLVLGLFSV 487
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
83-567 |
9.69e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 172.72 E-value: 9.69e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFwrerqasiYGA 162
Cdd:MTH00151 59 FSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIY--------YQN 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 163 QKSL-----------------IITVFGGLSLLggiillaiptqSFSIQYMIqhaseiqNSPFFIFAMILIMIGAFTKSAQ 225
Cdd:MTH00151 131 KKSLsagmltaltnrigdvliLLSIALLVLLG-----------HWSILSMW-------DFKLSGWLGLLLVLAAMTKSAQ 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 226 FPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFST 305
Cdd:MTH00151 193 IPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALST 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 306 VSQLGMIMAMLGIGAISYhyqgddskiyaaaftaAIFHLINHATFKGALFMITGAVDHST-GTRDVKKLGGLLTVMPISF 384
Cdd:MTH00151 273 LSQLGVMMFSLGLGMPSL----------------ALFHLYTHALFKALLFLCAGSIIHSSsGTQDIRLLGSLFLSLPLTS 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 385 TITVITALSMAGVPPFNGFLSKESFLETTFTaSQANLFSVdtlgylfpIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLP 464
Cdd:MTH00151 337 GCLNISSLSLCGAPFLSGFYSKDLILESSLM-SPTSLLMV--------LLMFVGVGLTALYSARLSFCLVWGSMKSSSLS 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 465 KKAhEVSILMLLSPAILAtlviVFGLFPGILTNSIIEPATSSInhtviddvefhmfhgLTPAFLSTLVIYILGILLIVTF 544
Cdd:MTH00151 408 SKS-DEDFYVSLPMLLLS----LGALIGGKLLQSLFEGFSEEF---------------FLPSYLKLLIGFVILLGLFLSF 467
|
490 500
....*....|....*....|...
gi 613313568 545 SYWVKLLQRqpGKLTFNYWYNRS 567
Cdd:MTH00151 468 GFWDSGFSS--SKMVKLSFFFSS 488
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
13-450 |
9.98e-46 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 173.17 E-value: 9.98e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 13 IFALIIPILYRFFKRIH--------LGWFVLPVPIVIFIYMLTlikttmsgNTVMKTLNWMPHFgmNFDLYLDGLGLLFS 84
Cdd:MTH00066 15 LLLLILPLLLPKSNNFHtnvktsvkTAFFISLIPLMIFINQGL--------ESITTSFHWMNIF--NFNINSSFKFDQYS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 85 LLISGIGSLV----VLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER----- 155
Cdd:MTH00066 85 IIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARadant 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 156 ---QASIYG--AQKSLIITVFGGlsllggiillAIPTQSFSIQYMIqhaseIQNSPFFIFAMILImIGAFTKSAQFPFYI 230
Cdd:MTH00066 165 aalQAVLYNrvGDIGLILSMAWL----------AMNTNSWELQQIF-----LLNDNSTLPLLGLI-LAAAGKSAQFGLHP 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 231 WLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLG 310
Cdd:MTH00066 229 WLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 311 MIMAMLGIGaisyhyqgddskiyaaAFTAAIFHLINHATFKGALFMITGAVDHS-TGTRDVKKLGGLLTVMPISFTITVI 389
Cdd:MTH00066 309 LMMVTIGLN----------------QPQLAFFHICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLQKALPITTSCLTI 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 613313568 390 TALSMAGVPPFNGFLSKESFLETTFTaSQANLFSVdtlgylfpIIGIVGSVFTFVYSIKFI 450
Cdd:MTH00066 373 GSLALTGTPFLAGFFSKDAIIEAMNT-SNLNSWAL--------ILTLIATSFTAVYSFRII 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
128-421 |
2.72e-43 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 158.63 E-value: 2.72e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 128 SDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPF 207
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 208 FIFAMILIMIGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGLYLIARMTPIFAASQGWI-WTVTLVGLITLF 285
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIqQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 286 WASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISyhyqgddskiyaaAFTAAIFHLINHATFKGALFMITGAVDHS- 364
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIY-------------GIQAAIFHLLTHGLFSAGLFLCAGSVIYRr 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 613313568 365 TGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANL 421
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
83-491 |
5.37e-43 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 164.93 E-value: 5.37e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFwrerqasiYGA 162
Cdd:MTH00165 59 FMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIY--------YQN 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 163 QKSL---IITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAP 239
Cdd:MTH00165 131 KKSYnagMLTALSNRIGDVAILLSIAWMMNFGSWNFIFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAP 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVKAGLYLIARMTPIFaASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIG 319
Cdd:MTH00165 211 TPVSALVHSSTLVTAGVYLLIRFNNLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 320 AISyhyqgddskiyaaaftAAIFHLINHATFKGALFMITGAVDHST-GTRDVKKLGGLLTVMPISFTITVITALSMAGVP 398
Cdd:MTH00165 290 FPK----------------LAFFHLLTHALFKALLFLCAGSIIHNMsNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFP 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 399 PFNGFLSKESFLEttftasqanLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKaHEVSILMLLSP 478
Cdd:MTH00165 354 FLSGFYSKDLILE---------MVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNL-SDESKFMLKSM 423
|
410
....*....|...
gi 613313568 479 AILATLVIVFGLF 491
Cdd:MTH00165 424 ILLLFMSIFGGSM 436
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
56-455 |
1.88e-42 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 164.37 E-value: 1.88e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 56 NTVMKTLNWMPHFGMNFDLYLDGLGllFSLLISGIGSLV----VLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNV 131
Cdd:MTH00208 83 NINISLSNWLSNTLFNFSLSFIFDF--YFILFFSVALFVtwsiIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 132 IILYLFWELTSFSSFLLISFWRER--------QASIYGAQKSLIITVFGGLSllggiillAIPTQSFSIQYMIQHASEiq 203
Cdd:MTH00208 161 FLLFIGWEGVGFLSFLLISWWTTRndanssalQAVIYNRIGDIGIILFLSLS--------LINFNSWNLNEILSLNNS-- 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 204 NSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLIT 283
Cdd:MTH00208 231 NSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLT 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 284 LFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGaisyhyqgddskiyaaAFTAAIFHLINHATFKGALFMITGAVDH 363
Cdd:MTH00208 311 ALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLN----------------QPNLALFHICTHAFFKAMLFLCSGSIIH 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 364 S-TGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLETTFtASQANLFSVdtlgylfpIIGIVGSVFT 442
Cdd:MTH00208 375 SlNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGL-ASISNLLSI--------ILALIATLLT 445
|
410
....*....|...
gi 613313568 443 FVYSIKFIMHIFF 455
Cdd:MTH00208 446 AVYSFRIIFFCFL 458
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-517 |
3.34e-40 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 155.36 E-value: 3.34e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIH--LGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDG 78
Cdd:PRK05846 3 WPLLSLLIFLPLIGGLLVLLTERFGARLArwIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHLGVDG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 79 LGLLFSLLISGIGSLVVLYSIGYLSKSeqLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQaS 158
Cdd:PRK05846 83 ISLLLVVLTALLTPLAVLASWEEIKKR--VKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGGKN-R 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IYGAQKSLIIT----VFGGLSLLGGIILLAIPTQSFSIQymiqhasEIQNSPFFIFAMILIMIGAF----TKSAQFPFYI 230
Cdd:PRK05846 160 IYAATKFFLYTllgsLLMLVAIIYLVVVYYNATGTFDIA-------DLLNLPLPPGVQYWLFLAFFiafaVKMPMFPLHT 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 231 WLPDAM-EAPTPVSAyLHSATMVKAGLY-LIARMTPIF-AASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVS 307
Cdd:PRK05846 233 WLPDAHvQAPTAGSV-LLAGILLKMGAYgLLRFSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 308 QLGMIMamLGIGAISyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTIT 387
Cdd:PRK05846 312 HMGFVT--LGIFAGN-----------QLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFF 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 388 VITALSMAGVPPFNGFLSKESFLETTFTASQanlfsvdtlgyLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKK- 466
Cdd:PRK05846 379 LFFAMASLGLPGTSGFVGEFLILLGSFQVNP-----------VIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKd 447
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 613313568 467 --AHEVSILmllspAILATLVIVFGLFPGILTNsIIEPATSSINHTVIDDVEF 517
Cdd:PRK05846 448 lnGRELLIL-----LPLVALLLLLGVYPKPLLD-VIHPSVENLLQWVAPSVAT 494
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
83-414 |
3.41e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 153.65 E-value: 3.41e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGa 162
Cdd:MTH00209 57 FSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAG- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 163 qkslIITVFGGLSLLGGIILlaiptqsfSIQYMIQHA-----SEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME 237
Cdd:MTH00209 136 ----MLTALTNRVGDALLIL--------SIAWMLMHGnwnifYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 238 APTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLG 317
Cdd:MTH00209 204 APTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLG 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 318 IGAISYhyqgddskiyaaaftaAIFHLINHATFKGALFMITGAVDHSTG-TRDVKKLGGLLTVMPISFTITVITALSMAG 396
Cdd:MTH00209 284 LNQPEL----------------AFFHLITHALFKALLFICAGNIIHSHGhSQDIRMVGNLWYQMPITSICLNIANLSLCG 347
|
330
....*....|....*...
gi 613313568 397 VPPFNGFLSKESFLETTF 414
Cdd:MTH00209 348 IPFLAGFYSKDLILESML 365
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
83-491 |
9.09e-38 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 147.77 E-value: 9.09e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSE--------QLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRE 154
Cdd:PRK06458 74 FLALIGVVGFLTSLYSIGYMRHEVehgelspvTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRT 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 155 RqASIYGAQKSLII-----------TVFGGLSLLGGIILLAIPTQSFSIqymIQHASEIqNSPFFIFAMILIMIGAFTKS 223
Cdd:PRK06458 154 R-ASLEAAWKYIIIcsvgvafalfgTILVYANAATVMGDGEMAILWTEL---LKHASLL-DPTLMKLAFVFLLIGFGTKV 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 224 AQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGLYLIARMTPIFAASQGWIWTVTLV---GLITLFWASLNATKQQDLKG 299
Cdd:PRK06458 229 GLFPMHAWLPDAhSEAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFPGRLLlifGLLSVLVAAFFLLRQRDIKR 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 300 ILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTV 379
Cdd:PRK06458 308 LFAYSSIEHMGLIAFALGIGG-------------PLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKV 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 380 MPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASqanlfsvdtLGYLFPIIgIVGSVFTFVYSIKFIMHIFFGQyK 459
Cdd:PRK06458 375 SPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARG---------PLLIAILL-LLLLTLAFAALVRRVAGMVFGE-P 443
|
410 420 430
....*....|....*....|....*....|..
gi 613313568 460 PEQLPKkaHEVSILMLLSPAILATLVIVFGLF 491
Cdd:PRK06458 444 PEAVNR--GDLGWLTTSPMFVHLVLVLVLGLY 473
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
10-492 |
1.29e-37 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 147.61 E-value: 1.29e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 10 LPLIFALIIPILYRFFKRIhlgwfvlpvpIVIFIYMLTLIKTTMSGNTVMKTLN-----------WMPHFGMNFDLYLDG 78
Cdd:PRK08377 11 LPLISAFFVPVIKGIGKSA----------VRYYLILITLLQTGIAGWVFMEVYTtgkpiiimaggWKPPVGINLYIGPFA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 79 LGllFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMlGVVLSDNVIILYLFWELTSFSSFLLISFWRERQAS 158
Cdd:PRK08377 81 AL--FVLIIAIVSFIMSIFSLKAVEVEPIDKYAMLFLLLMLGAT-GMIATGDIFNLFVFMEITAITAYALTAYNKTGEAA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IyGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIqNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME- 237
Cdd:PRK08377 158 E-ASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI-DPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQa 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 238 APTPVSAyLHSATMVKAGLYLIARMTPIFAASQGW---IWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMA 314
Cdd:PRK08377 236 APHPITV-MFSAFVVKAGLYAMARILYLMQNANGWssvLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIAL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 315 MLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSM 394
Cdd:PRK08377 315 ALALGT-------------QAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALST 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 395 AGVPPFNGFLSKESFLETTFTAsqanlfsvdtlGYLFPIIGIVG-SVFTFVYSIKFIMHIFFGQykPEQLPKKAHEVSIL 473
Cdd:PRK08377 382 VGIPLFNVFWSKFRIILAGLSA-----------GYTWPVALVLGaSVVEAVYYFRLIHTMWFKG--EGERIRENAAIGII 448
|
490
....*....|....*....
gi 613313568 474 MLLspaiLATLVIVFGLFP 492
Cdd:PRK08377 449 LLL----LAALIVVIGIYP 463
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
70-489 |
6.61e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 146.83 E-value: 6.61e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 70 MNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLI 149
Cdd:MTH00207 49 INFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 150 SFwrerqasiYGAQKSL---IITVFGGLSLLGGIILLAIPTQS---FSIQYMIQhaseiqnSPFFIFAMILIMIGAFTKS 223
Cdd:MTH00207 129 IY--------YQNPKSLgagMITALTNRIGDVMLLLSIGWTLNqghWSITNMWQ-------TDMNNYIALSIMIAAMTKS 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 224 AQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAF 303
Cdd:MTH00207 194 AQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIAL 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 304 STVSQLGMIMAMLGIGAIsyhyqgddskiyaaafTAAIFHLINHATFKGALFMITGAVDHS-TGTRDVKKLGGLLTVMPI 382
Cdd:MTH00207 274 STLSQLGVMMASLGLGMP----------------KLALFHLITHALFKALLFVCAGSLIHShHHSQDLRTMGNLTNQMPL 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 383 SFTITVITALSMAGVPPFNGFLSKESFLETTftasqanLFSvdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGqyKPEQ 462
Cdd:MTH00207 338 TTSCLLIANLALCGSPFLSGFYSKDLILESS-------LFY--PHNSLMILMIFLATALTAAYSTRFTLAVLWS--PNSS 406
|
410 420
....*....|....*....|....*..
gi 613313568 463 LPKKAHEVSILMLLSPAILATLVIVFG 489
Cdd:MTH00207 407 SPYHHLEDEDKSLTTPMLLLTLGAITS 433
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
97-457 |
7.18e-37 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 146.92 E-value: 7.18e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 97 YSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER--------QASIYG--AQKSL 166
Cdd:MTH00108 103 FSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRtdantaalQAILYNriGDIGF 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 167 IITVfgglsllggiILLAIPTQSFSIQYMIqhaseIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 246
Cdd:MTH00108 183 ILAM----------AWFLLNLNSWDLQQIF-----MLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 247 HSATMVKAGLYLIARMTPIFAASQgWIWTVTL-VGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYhy 325
Cdd:MTH00108 248 HSSTMVVAGVFLLIRFHPLMENNK-TIQTLTLcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHL-- 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 326 qgddskiyaaaftaAIFHLINHATFKGALFMITGAVDHSTGT-RDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFL 404
Cdd:MTH00108 325 --------------AFLHICTHAFFKAMLFMCSGSIIHNLNDeQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFY 390
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 613313568 405 SKESFLETTFTaSQANLFSVdtlgylfpIIGIVGSVFTFVYSIKFIMHIFFGQ 457
Cdd:MTH00108 391 SKDLIIEAANT-SYTNAWAL--------LITLIATSLTAAYSTRIIFFALLGQ 434
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
4-511 |
3.67e-36 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 143.16 E-value: 3.67e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 4 LHIAVILPLIFALIIPILYRFFKRIHLgWFVLPVPIVIF---IYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLG 80
Cdd:TIGR01972 1 LSLLIFLPLIGALLILLLPSNKDGKAR-WIALVVALATLllsLLLLFQFDPTGSGFQFTEDIPWIPALGISYHLGVDGIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 LLFSLLISGIGSLVVLYSigYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQaSIY 160
Cdd:TIGR01972 80 LLLVLLTALLTLLAILAS--WESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPN-RIY 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 161 GAQKSLIITVFGGLSLLGGIILLAIPTQ-SFSIQYMIQhaseiQNSPFFI--FAMILIMIGAFTKSAQFPFYIWLPDAM- 236
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLN-----LPLPFGVqtWLFLAFFIAFAVKVPLFPLHTWLPDAHv 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 237 EAPTPVSAYLhSATMVKAGLYLIARMT-PIF-AASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIma 314
Cdd:TIGR01972 232 EAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV-- 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 315 MLGIGAISyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSM 394
Cdd:TIGR01972 309 LLGIFSFN-----------ELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMAS 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 395 AGVPPFNGFLSKESFLETTFTASQanlfsvdtlgyLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKK----AHEV 470
Cdd:TIGR01972 378 LGLPGTSGFVGEFLILLGSFKVNP-----------VVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFpdlnGREI 446
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 613313568 471 SILmllspAILATLVIVFGLFPGILTNsIIEPATSSINHTV 511
Cdd:TIGR01972 447 AVL-----APLVVLILFLGLYPNPLLD-LTEPSVNNLLSQV 481
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
83-499 |
4.70e-36 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 142.56 E-value: 4.70e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFM--GAMLgVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIY 160
Cdd:COG1007 75 FKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFAtlGMML-MASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 161 GAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQH-ASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME-A 238
Cdd:COG1007 154 AALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAAlAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEgA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLhsATMVK-AGLYLIAR--MTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMImaM 315
Cdd:COG1007 234 PTPVTAFL--ATAPKiAAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYL--L 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 316 LGIGAISyhyqgddskiyAAAFTAAIFHLINHATFK-GALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSM 394
Cdd:COG1007 310 LGLAAGT-----------PLGVSAALFYLLAYLFMNlGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSL 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 395 AGVPPFNGFLSKesfLETTFTASQANLfsvdtlgYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILM 474
Cdd:COG1007 379 AGIPPTAGFFGK---FYVFSAAVEAGL-------YWLAVIAVLNSVISAYYYLRVVKAMYFDEPEEEAPISAPPGLRVAL 448
|
410 420
....*....|....*....|....*
gi 613313568 475 llspAILATLVIVFGLFPGILTNSI 499
Cdd:COG1007 449 ----VIAALLVLLLGIFPGPLLDLA 469
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
116-495 |
3.42e-35 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 141.57 E-value: 3.42e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 116 LLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAqKSLIITVFGGLSLLGGIILLAIPTQSFSIQYM 195
Cdd:PRK12668 100 LLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGF-RYLLVHVLGGVLLLAGILLHYAETGSFAFGAI 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 196 IQHASEiqnspffifAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPifaasqGWIWT 275
Cdd:PRK12668 179 AGLGGT---------AAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP------GTELL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 276 VTLVGLITLFWAsLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALF 355
Cdd:PRK12668 244 IYIGAAMAVYGV-FFALLENDLRRLLSYHIVSQVGYMVAGIGIGT-------------ALAINGAVAHAFNHILYKGLLF 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 356 MITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKesflETTFTASQANLFSVDTLGYLFpiig 435
Cdd:PRK12668 310 MSAGAVLYRTGTEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSK----SMIISAAGEDHYVWVWLLLLL---- 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 613313568 436 ivGSVFTFVYS-IKFIMHIFFGqykpEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGIL 495
Cdd:PRK12668 382 --ASAGTFLHFgIKLPYFAFFG----GDSGLRVKDAPRNMLVAMGIAAFLCIAIGVYPQAL 436
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
111-411 |
8.11e-35 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 141.12 E-value: 8.11e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 111 FYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER--------QASIY------GaqksLIITVfgglsl 176
Cdd:MTH00137 121 FFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRadantaalQAVIYnrvgdiG----LILAM------ 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 177 lggiILLAIPTQSFSIQYMIQHAseiQNSPFFIFAMILImIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGL 256
Cdd:MTH00137 191 ----AWMATNLNSWEIQQIFALS---KDFDLTLPLLGLI-LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGI 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 257 YLIARMTPIFAASQGWIWTVTLVG-LITLFWASLnATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYhyqgddskiyaa 335
Cdd:MTH00137 263 FLLIRLSPLMENNQTALTTCLCLGaLTTLFTATC-ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQL------------ 329
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613313568 336 aftaAIFHLINHATFKGALFMITGAVDHS-TGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLE 411
Cdd:MTH00137 330 ----AFLHICTHAFFKAMLFLCSGSIIHSlNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIE 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-504 |
1.18e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 138.80 E-value: 1.18e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKS--EQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIY 160
Cdd:PRK06589 88 FLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNISLSG 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 161 GAQ--KSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIqnspffifAMILIMIGAFTKSAQFPFYIWLPDAMEA 238
Cdd:PRK06589 168 GYKylKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSI--------ILLLMFIYGIAKTAIFPVHSWLPAAMVA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLHSATMVKAGLYLIARMT---------PIFAASQGWIWTVTLVgliTLFWASLNATKQQDLKGILAFSTVSQL 309
Cdd:PRK06589 240 HYPVSALLHAVIVVKTGLFCIYKILlyifglsylQRIFAEFNWLIFIPIV---SIFYSSLKALKTDNIKKILAYSTISQL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 310 GMIMAMLGIgaisyhyqgddskIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVI 389
Cdd:PRK06589 317 SLALLSAFI-------------LTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISI 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 390 TALSMAGVPPFNGFLSKESFLETTFTASQAnlfsvdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKahe 469
Cdd:PRK06589 384 SSLSLIGIPIFSGFISKFLILLAASEQNQP------WLSIIVMLVVIASSILSALYLLKILSSIYKPSLSENSFITK--- 454
|
410 420 430
....*....|....*....|....*....|....*
gi 613313568 470 VSILMLLSPAILATLVIVFGLFPGILTNSIIEPAT 504
Cdd:PRK06589 455 SLPYLMQISVITCCCALTLFYFIQILIREFLAYIT 489
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-496 |
2.11e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 134.86 E-value: 2.11e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILyrffKRIHLGWFV--LPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDG 78
Cdd:PRK12662 3 SHLPILQVIIPLLSAVVCALL----KNRKLVKIIscIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELRVDILS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 79 LGLLfsLLISGIGSLVVLYSIgYLSKSE----QLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRE 154
Cdd:PRK12662 79 ATML--VLVNFIAVMSVLYGI-YPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 155 RQASIYGAQKSLIITVFGGLSLLGGIILLAIpTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPD 234
Cdd:PRK12662 156 KKALVAAFEYLIIGTIGATFYLIGIGFLYAI-TGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 235 AM-EAPTPVSAYLhSATMVKAGLYLIARM------TPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVS 307
Cdd:PRK12662 235 AYsEAPSFISVFF-SGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 308 QLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTIT 387
Cdd:PRK12662 314 HIGYIILAVSLNT-------------YYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAF 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 388 VITALSMAGVPPFNGFLSKESFLETTftasqanlfsVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLP-KK 466
Cdd:PRK12662 381 VLLSLSLIGMPPTSGFVAKWYILDAF----------IKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKAnDK 450
|
490 500 510
....*....|....*....|....*....|
gi 613313568 467 AHEVSILMLLSPAILATLVIVFGLFPGILT 496
Cdd:PRK12662 451 AFKTPNAMVLCIWIMAILSIIVGIYPIPLT 480
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-406 |
2.47e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 134.31 E-value: 2.47e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWfvlpvPIVIFIYMLTLIkttmsGNTVMKTLNWMPHFGmnfdlyldglg 80
Cdd:PRK07234 2 TSLTPVWIALPFLLGFAIYLLPKLDRNLALGM-----AIVSAVYALGLV-----ASMVPLELTLLDNFG----------- 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 llFSLLISGIG-------SLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWR 153
Cdd:PRK07234 61 --VTLRADALSgyfiltnALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPR 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 154 eRQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIqymiqhaSEIQNSPFFIFAmiLIMIGAFTKSAQFPFYIWLP 233
Cdd:PRK07234 139 -TDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAF-------SGLATADPEAFA--LIALGLLVKGGIFVSGLWLP 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 234 DAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWiwtVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIM 313
Cdd:PRK07234 209 LTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFIL 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 314 amlgigaisyhyqgddskiyAAAFTAAIFHLiNHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPIsftitVITALS 393
Cdd:PRK07234 286 --------------------AAPLVGGLYAL-AHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFS 339
|
410
....*....|...
gi 613313568 394 MAGVPPFNGFLSK 406
Cdd:PRK07234 340 IAGFPLLAGFVSK 352
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
8-491 |
9.06e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 130.07 E-value: 9.06e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 8 VILPLIFALIIPILYRFFKRIH-----LGWFVLPVPIVIFIYMLTLIKTTmsGNTVMKTLNWMPHFGMNFDLYLDGLGLL 82
Cdd:PRK07691 6 VILPILIPVITAILLIFLGKRPiiqryVALIGSLLTLVAAIILVANVYKH--GIQTLELGNWKAPFGIVFVADMFAALLV 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 fsLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER---QASI 159
Cdd:PRK07691 84 --LTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKiqlRESI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 160 ygaqKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEI--QNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME 237
Cdd:PRK07691 162 ----KYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELsaGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 238 APTPVSAYLHSATMVKAGLYLIARM-TPIFAASQGWIWTVTLV-GLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAM 315
Cdd:PRK07691 238 APPIAIAALFGALLTKVGVYAIARTfTLFFSHDTSFTHYLILIlALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 316 LGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMA 395
Cdd:PRK07691 318 VAMMT-------------ESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLA 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 396 GVPPFNGFLSKESFLETTFTASQanlfsvdtlgYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKaheVSILML 475
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAGF----------YVSGIIVLLSSLLVLYSVIKIFLKGFWGEPKGYDLNNK---VPVKKL 451
|
490
....*....|....*..
gi 613313568 476 LSPAILAT-LVIVFGLF 491
Cdd:PRK07691 452 LLPAVVLVaITILYGLG 468
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
86-512 |
3.36e-31 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 130.03 E-value: 3.36e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 86 LISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKS 165
Cdd:PRK07390 97 LITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDA 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMI-GAFTKSAQFPFYIWLPDAMEAPTPVSA 244
Cdd:PRK07390 177 FLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPLTATLLGLALIaGPTGKCAQFPLHLWLDEAMEGPNPASI 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 245 yLHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGaisyh 324
Cdd:PRK07390 257 -LRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQ----- 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 325 yQGDdskiyaaaftAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFL 404
Cdd:PRK07390 331 -QPD----------IALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFW 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 405 SKESFLETTFTASqanlfsvdtlGYLFPIIGIVgSVFTFVYSIKFIMHIFFGqyKPEQLPKKAHEVSILMLLSPAILATL 484
Cdd:PRK07390 400 ALLRLADGLWAVS----------PWLVGVLLLV-NALTAFNLTRVFRLVFLG--KPQQKTRRSPEVLWPMALPMVILAGF 466
|
410 420
....*....|....*....|....*...
gi 613313568 485 VIvfgLFPGILTNSIIEPATSSINHTVI 512
Cdd:PRK07390 467 TL---HLPLLLQQWGLLPSWEALNLWAA 491
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
83-456 |
1.97e-30 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 126.57 E-value: 1.97e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQaSIYGA 162
Cdd:MTH00095 50 FSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWD-SNSGA 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 163 QKSLI---ITVFGGLSLLGGIILLAIPTQSFSIqymiqhaseiqnspFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAP 239
Cdd:MTH00095 129 MNTALtnrIGDFFIFLFFSGFIFSSYYFFSFSF--------------FSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAP 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVKAGLYLIARMTPIFaASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIG 319
Cdd:MTH00095 195 TPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSG 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 320 aISYhyqgddskiyaaaftAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITV-ITALSMAGVP 398
Cdd:MTH00095 274 -LSF---------------VSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLlVTLFCLCGLM 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 613313568 399 PFNGFLSKESFLEttftasqanLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFG 456
Cdd:MTH00095 338 FTSGMVSKELILE---------LFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
1-507 |
5.63e-29 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 121.29 E-value: 5.63e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 1 MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLnwmpHFGMNFDLYLDGLG 80
Cdd:PRK06277 1 MNLLPLMVVFPMICAIIFNLLHGKDKLIKYLTFIVAILLPILPFLASYGYYYFGGHGLVNGY----HSGITYLFNPAKQI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 81 LLFSLLIsgIGSLVVLYSIGYLSKSeqlgNFYCYLLlFMG--AMLGVVLSDNVIILYLFWELTSFSSFLLIsFWRERQAS 158
Cdd:PRK06277 77 IIFVLSL--IASLVLITGLGEKKSS----GLYVFLM-LMGlaSVSAIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEA 238
Cdd:PRK06277 149 YKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAK 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTP-VSAYLHS---ATMVKAGLYL--IARMTPIFAASQGWIWTVTLVGLItlFWASLnATKQQDLKGILAFSTVSQLGMI 312
Cdd:PRK06277 229 AKPfGSALLQTfskFVLVALMLVIfkLFGGLSYFPSAQGVLIALSVLAMV--FGVVM-ALLQTDYKRLLAYHAISQGGYV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 313 MAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITAL 392
Cdd:PRK06277 306 AAGLALGT-------------PLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKL 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 393 SMAGVPPFNGFLSKESFLETTFTASQANLfsvdtlgylfPIIGIVGSVFTFVYSIKfIMHIFFGQYKPEQLPKKAHEVSI 472
Cdd:PRK06277 373 AISGVPPFNGFQSKLMLAQAAMQANMPEL----------AIIMIIVSIGTFVSMMK-AFYLIYLKPKPEELEYKNKKVPK 441
|
490 500 510
....*....|....*....|....*....|....*
gi 613313568 473 LMLLSPAILATLVIVFGLFPGILTNSIIEPATSSI 507
Cdd:PRK06277 442 YAVFSLAVLTILCIILGLFPDLVTNYLYPFANEIG 476
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
3-497 |
9.54e-28 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 118.13 E-value: 9.54e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 3 LLHIAVILPLIFALIIpILYRFFKRIHlGWFVLPVPIVIF-IYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLdglgl 81
Cdd:PRK12663 5 LLILPMLLPLLCGLVL-VFLRNRDRLQ-RYLAIGTLTILTlISLALLIYVQRHGPITLDFGGWLPPFGIQFTGDS----- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 82 lFSLLISGIGSLVVLYSIGY-LSKSEQLGN---FYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQa 157
Cdd:PRK12663 78 -LSALMVTTASFVATAIMAYgFGDIEHSGRrygFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQERE- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 158 SIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEI-QNSPFFIFAMILIMigAFT-KSAQFPFYiWLPDA 235
Cdd:PRK12663 156 QLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMgDTATLTTIALLFLL--AFGmKAALFPFM-WLPAA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 236 MEAPTPVSAYLHSATMVKAGLY-LIARMTPIFAASQGWIWTV-TLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIM 313
Cdd:PRK12663 233 YHTPNTEVAALFAALLTKVGIYaLIRVFTLLFPQERELLHPLlATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFIL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 314 AMLGIGAIsyhyqgddskiyaAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALS 393
Cdd:PRK12663 313 LGLALGTP-------------AGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFA 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 394 MAGVPPFNGFLSKESFLETtftasqanlfSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAheVSIL 473
Cdd:PRK12663 380 IGGLPPFSGFWGKVLLVQG----------ALDNGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKP--IPLY 447
|
490 500
....*....|....*....|....
gi 613313568 474 MLLSPAILATLVIVFGLFPGILTN 497
Cdd:PRK12663 448 RKLPLSILAVVVIAMGIAAEPLLN 471
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
83-495 |
3.26e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 116.07 E-value: 3.26e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQlGNFYcYLLLFM-GAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYG 161
Cdd:PRK05777 78 LKGLILLASLLALLLARPYLEDRGR-GEFY-LLVLFAlLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 162 AQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQ-HASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME-AP 239
Cdd:PRK05777 156 AIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKaLADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEgAP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLHSATMVkAGLYLIARMTPIFAASQGWIWTVTLVGL--ITLFWASLNATKQQDLKGILAFSTVSQLGMImaMLG 317
Cdd:PRK05777 236 TPVTAFLATAPKI-AAFAVLLRLLVVAFGGLSEDWQQVLAIIaiASMLVGNLAALSQTNIKRLLAYSSIAHAGYL--LVG 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 318 IGAISYhyqgddskiyaAAFTAAIFHLINHATFKGALF-MITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAG 396
Cdd:PRK05777 313 LAAGTA-----------EGYSAVLFYLLAYLFMTLGAFgVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAG 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 397 VPPFNGFLSKESFLETTFTASQANLfsvdtlgylfPIIGIVGSVFTFVYSIKFIMHIFFgqyKPEQLPKKAHEVSILMLL 476
Cdd:PRK05777 382 IPPTAGFWGKFYVFEAAVEAGLWWL----------AVIGVLNSAIGAFYYLRVIKLMYF---DEPPRDAPVNWPLSAGGA 448
|
410
....*....|....*....
gi 613313568 477 SPAILATLVIVFGLFPGIL 495
Cdd:PRK05777 449 VLSVSALLVLVLGIFPQPL 467
|
|
| MnhB |
COG2111 |
Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism]; |
6-779 |
4.87e-26 |
|
Multisubunit Na+/H+ antiporter, MnhB subunit [Inorganic ion transport and metabolism];
Pssm-ID: 441714 [Multi-domain] Cd Length: 750 Bit Score: 114.42 E-value: 4.87e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 6 IAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSL 85
Cdd:COG2111 2 LLLLLLLLLLLLLLLLALLLLLLLLLLLLALAAAALAALLALLAALALLLAATAAAAALALLLLLLLLAALLLLLLLLLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 86 LISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKS 165
Cdd:COG2111 82 LLLLLLLLLLLLLLLLLLLLGALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLLLLLLAAAAAAAAAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIqnSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAY 245
Cdd:COG2111 162 LLGGGGGALLLLLLLLLLLGLLALAAAAALALLLLLL--LPLLLALALAAAAAAAAAAAALLFFLFLAAAAAAAAAAAAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 246 LHSATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAIsyhy 325
Cdd:COG2111 240 AAAAAAAVAVVALLLLLALVAGLLLLLLLLLLLLLLLLLLLGLLGALLLLLLLLLLLLLLLLLLLLLLLLLLLGLL---- 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 326 qgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLS 405
Cdd:COG2111 316 --------LAAAAAAAAALLALLLLLALALLLLLALALAAGLGLRLLLLLLLRLLAALLAAAAAAALAAAAALLLLLLLL 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 406 KESFLETTFTASqanlfsvdTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLV 485
Cdd:COG2111 388 LLALLLALGLLG--------LLLLLAALLAAAALLAAAAAAALALALLGGALAAAPAAAAAALLLLLLLLLALLLLALLL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 486 IVFGLFPGILTNSIIEPATSSINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYN 565
Cdd:COG2111 460 LLLLLLALLLLLLLAVAALVALLLLLLLLLLLLLVLVLLLLLLLLLLLLLLLLLLLLRAAARAALLALAAAAAGAAAYAL 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 566 RSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTVFSVPFNINFKDVSPIRIFEVCIVILLLSAAFLILFAKSR 645
Cdd:COG2111 540 ALGLLLVAAASTTGGGGGGLLLGLLGVVVVVVVLVLVLLLLALGLVLLLLLARLGALALLLLLLLALLVAAAAASLILSR 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 646 LFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNekrsFQLTNALIAGGVGLSVIIIGL 725
Cdd:COG2111 620 LTRVLLPGILGFSVYLFFRGHNAPGGGFTGGLVEALALILLYLALGRLWVEERLP----VDALILIGVGLLLAALTGLAA 695
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 613313568 726 IAYGNRHFESiskfyqeHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLA 779
Cdd:COG2111 696 LLFGGPFLTS-------AFLPLAGGLNLVNAILFDFGVFDTVGGITVLILAALG 742
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
3-492 |
6.97e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 112.49 E-value: 6.97e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 3 LLHIAVILPLIFALII-----PILYRFFKRIHLGwfvlpVPIVIFIYMLTLIKTTMSGNTVMK---TLNWMPHFGMNFDL 74
Cdd:PRK06473 1 MLSALIWIPLLGAILIgfwpsGINGKLARSVALV-----IASVLLLLSLVLAFQFDPGNPNQQfteFIPWIDSLGLSYHL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 75 YLDGlgllFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFM-GAMLGVVLSDNVIILYLFWELTSFSSFLLISFWR 153
Cdd:PRK06473 76 GVDG----LSLPLLVLNSLLTLIAIYSSDESIQRPRFYYSLLLLLnAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 154 ERQASiYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFaMILIMIGAFTKSAQFPFYIWLP 233
Cdd:PRK06473 152 GQRRG-YAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQLLL-LAPILVGFGIKIPLVPFHTWLP 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 234 DA-MEAPTPVSAYLhSATMVKAGLYLIARMTpIFAASQGWI----WTVTLvGLITLFWASLNATKQQDLKGILAFSTVSQ 308
Cdd:PRK06473 230 DAhVEASTPVSVLL-AGVLLKLGTYGLLRFG-VGLFPEAWVylapWLATW-AVVSVLYGASCAIAQKDMKKMVAYSSIGH 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 309 LGMIMamlgigaisyhyqgddskIYAAAFT-----AAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTV---M 380
Cdd:PRK06473 307 MGYIL------------------LAAAAATplsilAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPergL 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 381 PISFTITVITALSMAGVPPFNGFLSKESFLETTFtasqaNLFSVDTLgylfpiIGIVGSVFTFVYSIKFIMHIFFGQYKP 460
Cdd:PRK06473 369 PITGSLMILGVMASAGIPGMVGFIAEFLVFRGSF-----PIFPVQTL------LCMIGTGLTAVYFLLLVNRVFFGRLTA 437
|
490 500 510
....*....|....*....|....*....|....
gi 613313568 461 E--QLPKkaheVSILMLLSPAILATLVIVFGLFP 492
Cdd:PRK06473 438 ElsNLPR----VLWSERLPALVLAVLIVVLGIQP 467
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
32-497 |
1.87e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 111.28 E-value: 1.87e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 32 WFVLPVPIVIFIYML----TLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLiSGIGSLVVLYSIGYLSKSEQ 107
Cdd:PRK12561 9 WYALGVGLADFALMCyvfwQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLVLL-SGLITTLSIFASWKVTRKPR 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 108 LgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW--RERQasiYGAQKSLIITVFGGLSLLGGIILLAI 185
Cdd:PRK12561 88 L--FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRL---YAATKFILYTALASIFILVAGLALAL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 186 PTQSFSIQyMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAM-EAPTPVSAYLhSATMVKAGLYLIAR--- 261
Cdd:PRK12561 163 SGDTFTFD-LAELGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVSMIL-AGVLLKMGGYALIRfnv 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 262 -MTP----IFAAsqgwiwTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMamLGIGAISyhyqgddskiyAAA 336
Cdd:PRK12561 241 qMLPdahvYFAP------ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFT-----------DLG 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 337 FTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKES-FLETTFT 415
Cdd:PRK12561 302 ISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTvFLGITSS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 416 ASQANLFSVDTLgylfpIIGIVGSVFTFVYSIKFIMHIFFGQYKPEqLPKKAH-------EVSI-LMLLSPailatlVIV 487
Cdd:PRK12561 382 DVYSSTFRTITI-----LLAAVGLILTPIYLLSMLRRVFYGPRSEL-LPALAVvedakprELFIaLSLLVP------IIG 449
|
490
....*....|
gi 613313568 488 FGLFPGILTN 497
Cdd:PRK12561 450 IGFYPKLATQ 459
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
188-490 |
9.42e-25 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 109.53 E-value: 9.42e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 188 QSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFA 267
Cdd:PRK08042 159 QRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGG 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 268 ASQGWiWTVTL--VGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMamLGIGAISYHYQGDDSKIYAAAFTAAIFHLI 345
Cdd:PRK08042 239 NAPLW-WGVALlvLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIL--LGLGAGVTGIALEQPALIALGLVGGLYHLL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 346 NHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANLFSVD 425
Cdd:PRK08042 316 NHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVAR 395
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 426 TLGYLFPI-IGIVGSVFTF----VYSIKFImhiffGQYKPEQlPKKAHEVSILMLLSPAILATLVIVFGL 490
Cdd:PRK08042 396 LLGPLLAVgLAITGALAVMcmakVYGVTFL-----GAPRTKE-AENATCAPLLMSVSVVALAICCVIGGV 459
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
86-371 |
1.45e-24 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 108.63 E-value: 1.45e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 86 LISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKS 165
Cdd:PRK08168 77 LVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKK 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAY 245
Cdd:PRK08168 157 FIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSAL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 246 LHsATMVKAGLYLIARMTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGaisyhy 325
Cdd:PRK08168 237 LH-AGVVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLG------ 309
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 613313568 326 qgddskiyaaAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVK 371
Cdd:PRK08168 310 ----------LYELALLHLVAHSLYKAHAFLSASEAVRDTRLRRLQ 345
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
209-411 |
5.97e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 103.51 E-value: 5.97e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 209 IFAMILIMIGafTKSAQFPFYIWLPDAM-EAPTPVSAYLhSATMVKAGLYLIARM-TPIFAASQgwIWTVTLV-GLITLF 285
Cdd:PRK12665 211 LFAVLLVAFG--IKAAVFPLSFWLPDSYpTAPAPVTAVF-AGLLTKVGVYAIIRThTLLFPGGG--LDTLLMVvALLTMV 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 286 WASLNATKQQDLKGILAFSTVSQLG-MIMamlGIGAISyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHS 364
Cdd:PRK12665 286 VGILGAIAQSDIKRLLSFTLVSHIGyMVF---GIALST-----------VAGLSGAIYYVAHHITVQTTLFLVVGLIERQ 351
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 613313568 365 TGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLE 411
Cdd:PRK12665 352 AGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-495 |
3.52e-22 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.79 E-value: 3.52e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 6 IAVILPLIFALIIPILYRFFKRIH-LGWFVLPVPIVIFIYMLTLIKTTMSGNTVMktlnwmphFGMNFDLYLDGLGLLFS 84
Cdd:TIGR01770 8 IILLLGAFILLLYGLFYSRKKRNPlLLKNLSYIVLLSALVSLFLTLQYAAYLFTG--------FSFFIVDNFALLIKLIL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 85 LLISGigsLVVLYSIGYLSKSE-QLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQ 163
Cdd:TIGR01770 80 LLSTL---LTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 164 KSLIITVFGGLSLLGGIILLAIPTQSFSI-QYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME-APTP 241
Cdd:TIGR01770 157 KYFILGAFSSGLLLFGISLIYGFTGSLNFeDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEgAPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 242 VSAYLHSATMVkAGLYLIAR--MTPIFAASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMamlgIG 319
Cdd:TIGR01770 237 VTAFFSIVPKI-AIFAVFLRlfLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYIL----IG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 320 AISYHYQGddskIYAAAFTAAIFHLINHATFkgALFMITGAVDHsTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPP 399
Cdd:TIGR01770 312 LLAGTLEG----IKAVLFYIFIYALMSLGAF--GVLSLLRSYKD-EWIEYISDFAGLFKTNPILAILILIFMFSLAGIPP 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 400 FNGFLSKesfLETTFTASQANLfsvdtlgYLFPIIGIVGSVFTFVYSIKFIMHIFFgqYKPEqLPKKAHEVSILMLLSPA 479
Cdd:TIGR01770 385 LAGFFGK---FYVFFALLKSGL-------YWLAVIAVLTSVIGAFYYLRVVKVMYF--DKPE-RRIPSNPQSKAQSLLLS 451
|
490
....*....|....*.
gi 613313568 480 ILATLVIVFGLFPGIL 495
Cdd:TIGR01770 452 ISALFILFLGLFPSLI 467
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
3-507 |
1.68e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 95.93 E-value: 1.68e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 3 LLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIF---IYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLyldgL 79
Cdd:PRK07363 1 MLSVLLWLPILGAIIIGFFPGNLPSARLRQITLVFAVLVLawsLFLLTQFDLSDPGMQFQEYLPWNEPLGLSYSL----G 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 80 GLLFSLLISGIGSL---VVLYSIGYLSKSEQLgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW-RER 155
Cdd:PRK07363 77 VDGLSLPLLVLNSLltwIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWgGEK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 156 QAsiYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFaMILIMIGAFTKSAQFPFYIWLPDA 235
Cdd:PRK07363 155 RG--YASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLIL-LTGLLLGFGIKIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 236 MEAPTPVSAYLHSATMVKAGLYLIAR----MTPifaasQGWIW---TVTLVGLITLFWASLNATKQQDLKGILAFSTVSQ 308
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRfglqLFP-----QTWSLvapGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGH 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 309 LGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTV---MPISFT 385
Cdd:PRK07363 307 MGYILVAAAAGT-------------QLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSA 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 386 ITVITALSMAGVPPFNGFLSKESFLETTFTAsqanlFSVDTLgylfpiIGIVGSVFTFVYSIKFIMHIFFGQ------YK 459
Cdd:PRK07363 374 LLVLAGMASAGIPGLVGFVAEFIVFQGSFST-----FPIPTL------LCIVASGLTAVYFVILLNRTCFGRldnklaYY 442
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 613313568 460 PEQLPKKAhevsilmllSPA-ILATLVIVFGLFPGILTNsIIEPATSSI 507
Cdd:PRK07363 443 PKVLWSEK---------IPAlILTALILFLGVQPNWLVR-WSEPTTTAM 481
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
200-507 |
1.34e-19 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 92.76 E-value: 1.34e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 200 SEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME-APTPVSAYLhSATMVKAGLYLIARM--TPIFAASQGWIWTV 276
Cdd:CHL00049 205 TQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIfdIPFYFSSNEWHLLL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 277 TLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMamlgIGAISyhyqGDDSKIYAAAFTAAIFHL-INHATFKG-AL 354
Cdd:CHL00049 284 EILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI----IGIIV----GDSNDGYASMITYMLFYIfMNLGTFACiVL 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 355 FMItgavdhSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKesfLETTFTASQANLfsvdtlgYLFPII 434
Cdd:CHL00049 356 FGL------RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK---LYLFWCGWQAGL-------YFLVSI 419
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 613313568 435 GIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFG-LFPGILTNSIIEPATSSI 507
Cdd:CHL00049 420 GLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIAsTIPGISMNPIIAIAQDTL 493
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
4-498 |
2.38e-19 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 92.46 E-value: 2.38e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 4 LHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKT----TMSGNTVMKTLNWMPHFGMNFDLYLDGL 79
Cdd:PRK02546 9 LTTIILFPIVAALLIPFIPDKGDGKTVRWYALIVGLIDFLITVYAFYTgydfSNPGLQLVESYSWLPQLGLTWSVGADGL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 80 GLLFSLLISGIGSLVVLYSIGYLSKSEQlgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW--RERQa 157
Cdd:PRK02546 89 SMPLILLTGFITTLAVLAAWPVTFKPKL---FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWggKKRQ- 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 158 siYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEI-QNSPFFIFAMILIMIGafTKSAQFPFYIWLPDAM 236
Cdd:PRK02546 165 --YAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFgLGFQLLCYAGLLIAYG--VKLPIVPLHTWLPDAH 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 237 -EAPTPVSAYLhSATMVKAGLYLIARMTPIF--AASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIM 313
Cdd:PRK02546 241 gEATAPVHMLL-AGILLKMGGYALLRMNAGMlpDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 314 amLGIGAISyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALS 393
Cdd:PRK02546 320 --IGIGSFT-----------DLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 394 MAGVPPFNGFLSkESFLETTFTASQANlfsvdTLGYLFPIIGI--VGSVFTFVYSIKFIMHIFFGQYKPEQLPKKA---- 467
Cdd:PRK02546 387 SLALPGMSGFVA-ELMVFVGFATSDAY-----TLPFRVVVVFLaaVGVILTPIYLLSMLREIFFGPENKELVSHEKlvda 460
|
490 500 510
....*....|....*....|....*....|...
gi 613313568 468 --HEVSILmllspAILATLVIVFGLFPGILTNS 498
Cdd:PRK02546 461 epREVFII-----ACLLVPIIGIGLYPKLVTQS 488
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
65-406 |
7.23e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 87.50 E-value: 7.23e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 65 MPHFGMNFDLYLDGLGLLFSLLISGIG-SLVVLYSIGYLS--------KSEQLGNFYCYLLLFMGAMLGVVLSDNVIILY 135
Cdd:PRK08676 49 LPGYFMESRYLFIDHLGIFVVLIASVVfILAALYARGYVDhllsngelDPENLKVFYLGFNLLLSVITFAFFSDNLALFW 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 136 LFWELTSFSSFLLISFWRERqASIYGAQKSLIIT------VFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFI 209
Cdd:PRK08676 129 IFAELTTVFSAMLIAILSAR-ENIDAALKYIFIAstamifAFIGLIFLFSLTRQALGTGTLNWTELAAHASLLSPSVLGA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 210 fAMILIMIGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGLYLIARMTPIFAASQ-GWIWTVTLV--GLITLF 285
Cdd:PRK08676 208 -SFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGaAEQFSNVLIglGIFSIA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 286 WASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHST 365
Cdd:PRK08676 286 VAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGT-------------PLALFWMLFHMLAHSLVKSGLFFSAGILHRQY 352
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 613313568 366 GTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSK 406
Cdd:PRK08676 353 RSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSK 393
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
83-542 |
1.04e-17 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 87.54 E-value: 1.04e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKSEQLGNFYCyllLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYga 162
Cdd:PRK06459 49 FSIISTIVWILASLYSIEYDHYGKWLSSLYI---LTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRPAF-- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 163 qksliitVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPffifaMILIMIGAFTKSAQFPFYI--WLPDAM-EAP 239
Cdd:PRK06459 124 -------VFMAFGELSTVLILAGFAWAFIISGTTNFSYLPSPVP-----LILASFGFIIKMGMMPFLVseWLPIAHgNAP 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 240 TPVSAYLhSATMVKAGLYLIARMTPI-FAASQGWI-WTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLG 317
Cdd:PRK06459 192 SNFSAIL-SATMTLMGVYGILKMTILtQTIPIGYFgLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALG 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 318 IGAISYHYQGDDSKIYAAAFtaaIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMpisftiTVITALSMAGV 397
Cdd:PRK06459 271 LYMVTKQLITSIEHFSLITV---ILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNRWIELG------LTLLASSLSGL 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 398 PPFNGFLSKESFLETTFtasQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLS 477
Cdd:PRK06459 342 LPNIGGVASWLLLESLF---MFAYVLHNVISILFIVTGAIIAMGEGLATALLIKYITYTSLFRNTKEQLSKIKKYPILLS 418
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 613313568 478 PAIlatlVIVFGLFPGILTNSIIEPATS---SINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIV 542
Cdd:PRK06459 419 ALI----VLILGFTLPYLISPFKTSTTIlgmLTNSLILSQYYNTTFGGISPLYIILLIVAFSLISYLA 482
|
|
| MbhE |
pfam20501 |
MBH, subunit E; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory ... |
707-790 |
1.80e-16 |
|
MBH, subunit E; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory complex homologous to the quinone-reducing Complex I. Like Complex I, MBH has peripheral and membrane arms. MBH is made of 14 subunits (MbhA-N). MbhJ, K, L, N and M form the Membrane-anchored hydrogenase module. MbhJ, K, L, N are predicted to be exposed to the cytoplasm and form the peripheral arm. The remaining 10 subunits are predicted to be integral membrane proteins forming the membrane arm, made of 44 transmembrane helices (TMH). MbhA, B, C and F form the Sodium translocation module. MbhD, E, G and H form the Proton translocation module. MbhI is the linker between the hydrogenase module and the proton-translocating membrane module. It anchors the discontinuous TMH7 of MbhH via its middle lateral helix and the C-terminal of TMH2, found in MbhE. MbhD and MbhE together are equivalent to Nqo10 of Complex I. MbhE has two transmembrane helices: TMH1 and TMH2.
Pssm-ID: 466650 [Multi-domain] Cd Length: 98 Bit Score: 75.41 E-value: 1.80e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 707 LTNALIAGGVGLSVIIIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMikL 786
Cdd:pfam20501 4 LRDLAIAVAAGAGMAALSYAVMTRPQTDSISDFFLERAYPEGGGRNVVNVILVDFRGFDTLGEITVLAIVALTVFAL--L 81
|
....
gi 613313568 787 RKKR 790
Cdd:pfam20501 82 RRFR 85
|
|
| MbhD |
pfam13244 |
MBH, subunit D; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory ... |
630-694 |
2.47e-15 |
|
MBH, subunit D; Hydrogen gas-evolving membrane-bound hydrogenase (MBH) is a respiratory complex homologous to the quinone-reducing Complex I. Like Complex I, MBH has peripheral and membrane arms. MBH is made of 14 subunits (MbhA-N). MbhJ, K, L, N and M form the Membrane-anchored hydrogenase module. MbhJ, K, L, N are predicted to be exposed to the cytoplasm and form the peripheral arm. The remaining 10 subunits are predicted to be integral membrane proteins forming the membrane arm, made of 44 transmembrane helices (TMH). MbhA, B, C and F form the Sodium translocation module. MbhD, E, G and H form the Proton translocation module. MbhI is the linker between the hydrogenase module and the proton-translocating membrane module. It anchors the discontinuous TMH7 of MbhH via its middle lateral helix and the C-terminal of TMH2, found in MbhE. MbhD and MbhE together are equivalent to Nqo10 of Complex I. MbhD has three TM helices.
Pssm-ID: 463816 [Multi-domain] Cd Length: 67 Bit Score: 70.88 E-value: 2.47e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 613313568 630 ILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQF-VVESISTALFLLCFYHLP 694
Cdd:pfam13244 1 LLLVVAALAAVLARDRLAAVILLGVVGLGVALLFVLLGAPDVALTQAaVGEGLTTVLFLLALRRLP 66
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
84-507 |
2.95e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 79.34 E-value: 2.95e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 84 SLLISGIGSLVVLYSIGYLSKSeqlgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQ----ASI 159
Cdd:MTH00204 92 TTLLIPICILISWKSIKFLFKE-----FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREekvrASY 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 160 YGAQKSLIITVFGGLSLLGGIILlaIPTQSFSIQYMIQHASEIQnspffIFAMILIMIGAFTKSAQFPFYIWLPDA-MEA 238
Cdd:MTH00204 167 YFFFYTFAGSVFMLLGIFQLYSI--TGTTDYQILLNIKLPLSIQ-----KWLLVGFFLSLAVKIPQIPFHIWLPQAhVEA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 239 PTPVSAYLhSATMVKAGLYLIARMT-PIF-AASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMaml 316
Cdd:MTH00204 240 PVAGSVIL-AGILLKLGGYGFLRFSwPLFpAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVP--- 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 317 gIGAISYHYQGddskiyaaaFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAG 396
Cdd:MTH00204 316 -LGLFTHTIEG---------LVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMG 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 397 VPpfngflskesfLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQykPEQLPKKAHEVSILMLL 476
Cdd:MTH00204 386 FP-----------LSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGG--GSNYLLFSRDLNRRELL 452
|
410 420 430
....*....|....*....|....*....|.
gi 613313568 477 SPAILATLVIVFGLFPGILTNSIIEPATSSI 507
Cdd:MTH00204 453 AILPLIIAIFLLGIVPFIIIDLVKNSLVFSP 483
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
2-361 |
4.00e-13 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 72.76 E-value: 4.00e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 2 SLLHIAVILPLIFALI-----IPILYrffKRIHLGWFVLPvPIVIFIYMLTLIKTTMSGNTVMKTLNWMphfgmnfdlyl 76
Cdd:PRK08601 12 TLFFIALIIALLSGLLflnprMPLRY---VRIHIGILALP-SLVALLGLIGANGDVVVGPWHLDTLAWL----------- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 77 dglgllFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQ 156
Cdd:PRK08601 77 ------MAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWK 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 157 ASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAM-ILIMIGAFTKSAQFPFYIWLPDA 235
Cdd:PRK08601 151 VAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNENLAQLGTWEKTGInLLLILAVMIPAAQWPFQRWLIES 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 236 MEAPTPVSAYLHsATMVKAGLYLIARMTPIFAAsqgwiwTVTLVGLITLFWAS-LNATK----QQDLKGILAFSTVSQLG 310
Cdd:PRK08601 231 AVAPTPVSAIMH-AGLVNAGGIMLTRFSPLFHD------DIAQILLLIFASISvLIGTGislvQVDYKRQLVGSTMAQMG 303
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 613313568 311 MIMAMLGIGaisyhyqgddskiyaaAFTAAIFHLINHATFKGALFMITGAV 361
Cdd:PRK08601 304 FMLVQCALG----------------AYSAAIIHLILHGLFKATLFLQSGSA 338
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
211-419 |
2.61e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 69.88 E-value: 2.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 211 AMILIMIGAFTKSAQFPFYIWLPDA-MEAPTPVSAYLhsATMVKAGLYLIARM-TPIFAASQG--------WIWTVtlvG 280
Cdd:PRK12666 212 GAALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLsTLLFGPEAGasagfgqdWLLPG---G 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 281 LITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLInHATFK-GALFMITG 359
Cdd:PRK12666 287 LATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGN-------------PAATAAALYYLV-HSTLAaAALFLLAD 352
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613313568 360 AV--------DHSTGTRDVKKLGG---LLTVMPISFTITV------ITALSMAGVPPFNGFLSKESFLETTFTASQA 419
Cdd:PRK12666 353 LVerqrgaaaDRLAVTPELYDLDEeeeEEVGVAIPATMALlgllffICALALAGLPPLSGFLGKFALLQALLNPPGA 429
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
91-366 |
3.51e-12 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 69.52 E-value: 3.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 91 GSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWrerqaSIYGAQKSLIITV 170
Cdd:MTH00063 58 FYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFY-----DNFLSLRASVVTL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 171 FgglsllggiillaipTQSF---SIQYMIQHASEIQNSPFFIFAMILIMIgaFTKSAQFPFYIWLPDAMEAPTPVSAYLH 247
Cdd:MTH00063 133 V---------------SSRFgdvCLFLLIGLSCWGGSGSFLCCLFFFLIV--FTKSASFPFISWLLEAMRAPTPVSSLVH 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 248 SATMVKAGLYLIARMTPIFAASQGWIWtVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLgigaisyhYQG 327
Cdd:MTH00063 196 SSTLVAAGVWFVMRYDYLLGFSWLSIF-FSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYL--------IYG 266
|
250 260 270
....*....|....*....|....*....|....*....
gi 613313568 328 DdskiyaaaFTAAIFHLINHATFKGALFMITGAVDHSTG 366
Cdd:MTH00063 267 D--------VILSLFQLVSHGVSKCLLFMLVGDVMSGSG 297
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
93-499 |
5.38e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 69.18 E-value: 5.38e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 93 LVVLYSIGYLSKSeqlgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER----QASIYGAQKSLII 168
Cdd:MTH00226 120 LISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSReekmQAAYYFFFYTLIG 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 169 TVFGGLSLLGGIILLAipTQSFSIQYMIQHASEIQNSPFFIFAMILIMIgafTKSAQFPFYIWLPDA-MEAPTPVSAYLh 247
Cdd:MTH00226 195 SVLMLLCLFSLYNIHG--TTDYLTLASCSHVVSEQTQKWIFLGIFLAMA---VKIPIFPFHIWLPKAhVEAPVAGSVLL- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 248 SATMVKAGLYLIARMT-PIFA-ASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAIsyhy 325
Cdd:MTH00226 269 AGILLKLGGYGLVRLSwPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDI---- 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 326 qgddskiyaAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLS 405
Cdd:MTH00226 345 ---------IGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIG 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 406 KESFLETTFTASqanlfsvdtlgylfPIIGIV---GSVFTFVYSIKFIMHIFFGqyKPEQLPKKAHEVSILMLLSPAILA 482
Cdd:MTH00226 416 EYLSILSSFNWN--------------PIIGVFvcsGVILSAVYSFYFANRVTFG--APGNLITFARDVNRREFYITASMV 479
|
410
....*....|....*..
gi 613313568 483 TLVIVFGLFPGILTNSI 499
Cdd:MTH00226 480 FFAFLIGIYPIFILEVI 496
|
|
| PRK12504 |
PRK12504 |
DUF4040 domain-containing protein; |
623-780 |
1.97e-11 |
|
DUF4040 domain-containing protein;
Pssm-ID: 183561 [Multi-domain] Cd Length: 178 Bit Score: 63.44 E-value: 1.97e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 623 IFEVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVES-ISTALFLLCfyhLPNLNRYNE 701
Cdd:PRK12504 5 IINAALLLFLVATAVATALLRDVLASIVVFAAFSLGMALIYLILDAPDVAITEAAVGAgISTVLLLLT---LALTGRPDV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 702 KRSFQLTN---ALIAGG--VGLSVIIIGLIAYG---NRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVL 773
Cdd:PRK12504 82 DKVFERINvpaVLIALVlfVALLYAVPDLPAFGdpnAPAHSHVTQYYIENTYRETGIPNVVTAVLASYRGYDTFGETVVV 161
|
....*..
gi 613313568 774 GIAGLAV 780
Cdd:PRK12504 162 FTAGVAV 168
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
83-510 |
6.55e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.46 E-value: 6.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 83 FSLLISGIGSLVVLYSIGYLSKS-EQLGNFYCYLLlfmGAMLGVVL---SDNVIILYLFWELTSFSSFLLISFWRERQAS 158
Cdd:PRK02504 83 FRAIIALSTLVTLLMSWRYVEQSgTPLGEFAAILL---TATLGGMFlsgATELVMIFISLETLSIASYLLTGYMKRDPRS 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 159 IYGAQKSLIITvfgglsllggIILLAIPTQSFSIQYMIQH--------ASEIQNSPFFIFAMILIMI--GAFTKSAQFPF 228
Cdd:PRK02504 160 NEAALKYLLIG----------AASSAIFLYGSSLLYGLSGgstqlsaiALALITSPSLGLALALVFViaGIAFKISAVPF 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 229 YIWLPDAME-APTPVSAYLhSATMVKAGLYLIAR-MTPIFAA-SQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFST 305
Cdd:PRK02504 230 HQWTPDVYEgSPTPVVAFL-SVGSKAAGFALAIRlLVTAFPSfDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 306 VSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHatfkgaLFMITGAV------DHSTGTRDVKKLGGLLTV 379
Cdd:PRK02504 309 IGQAGFVMIGLVAGT-------------EAGYASMVFYLLAY------LFMNLGAFacvilfSLRTGTDQISDYAGLYQK 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 380 MPISFTITVITALSMAGVPPFNGFLSKesfLETTFTASQANLfsvdtlgYLFPIIGIVGSVFTFVYSIKFIMHIffgqyk 459
Cdd:PRK02504 370 DPLLTLGLSLCLLSLGGIPPLAGFFGK---IYLFWAGWQAGL-------YLLVLVGLVTSVISIYYYIRVIKMM------ 433
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 613313568 460 peqLPKKAHEVSILMLLSPAI-------------LATLVIVFGLfPGILTNSIIEPATSSINHT 510
Cdd:PRK02504 434 ---VVKEPQEMSDVVKNYPEInwnlpgmrplrvgLVLCVIATAL-AGILSNPLFTLANTSVAGT 493
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
86-499 |
1.02e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 64.69 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 86 LISGIGSLVVLYSIGYLSKSeqlgnFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRER----QASIYG 161
Cdd:MTH00217 91 LLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSReekvQASYYF 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 162 AQKSLIITVFGGLSLLGGIILLAipTQSFSIQYMIQHASEIQnspFFIFamILIMIGAFTKSAQFPFYIWLPDA-MEAPT 240
Cdd:MTH00217 166 FFYTFIGSVFMLLGIFTLYSYAG--TTDYQALCCLKIEKELQ---YFIF--LGFFLSLAIKIPKIPFHIWLPQAhVEAPV 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 241 PVSAYLhSATMVKAGLYLIARMT-PIFA-ASQGWIWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMamlgI 318
Cdd:MTH00217 239 AGSVIL-AGVLLKLGGYGFIRFSwPLLPeASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVT----L 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 319 GAISYHYQGddskiyaaaFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVP 398
Cdd:MTH00217 314 GIFSHTIQG---------LVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 399 pfngflskesfLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYK-----PEQLPKKahEVSIL 473
Cdd:MTH00217 385 -----------LSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSkylyfSRDLNRR--EFYVL 451
|
410 420
....*....|....*....|....*.
gi 613313568 474 MllspaILATLVIVFGLFPGILTNSI 499
Cdd:MTH00217 452 L-----PLVFLIYLMGIFPFIIIDVI 472
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
41-484 |
6.43e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.18 E-value: 6.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 41 IFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLIsgigsLVVLYSIGYLSKSEQLGNFYCYLLLfMG 120
Cdd:MTH00206 30 FLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMF-----LASQNHMKNEPINRQRIYITLLIVL-QL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 121 AMLGVVLSDNVIILYLFWELTSFSSFLLISFW---RER-QASIYgaqkSLIITVFGGLSLLGGIILLAIPTQSFSIQYMI 196
Cdd:MTH00206 104 FLILFFSSSNLLLFYILFEASLIPTLLLITRWgnqKERlNAGYY----FLFYTLIGSLPLLIALLFLQNSLGSLSLYILY 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 197 QHASEIQNSPFFIFAMILIMIgafTKSAQFPFYIWLPDA-MEAPTPVSAYLhSATMVKAGLYLIARMTPIFAASQGWIWT 275
Cdd:MTH00206 180 FSKLTTWNNNLWWLACILAFL---VKLPLYGVHLWLPKAhVEAPVAGSMVL-AGVLLKLGGYGMMRIILILGPSTKLSSY 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 276 VTLV-GLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAmlgiGAISYHYQGddskiyaaaFTAAIFHLINHATFKGAL 354
Cdd:MTH00206 256 FFIIlGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTA----GILSGSPWG---------FKGALLLMIAHGLVSSAL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 355 FMITGAVDHSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSkESFLETtftasqaNLFSVDTlgYLFPII 434
Cdd:MTH00206 323 FCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFG-ELLIIT-------SLFSWSN--FTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 613313568 435 GIvGSVFTFVYSIKfiMHIFFGQYKPEQLPKKAHEVS------ILMLLSPAILATL 484
Cdd:MTH00206 393 GL-GFLFTAIYSLY--MFVMTQHGKTPNHLLSLSPSStrehllLFLHLFPVILLIL 445
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-491 |
3.00e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 57.05 E-value: 3.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 203 QNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARM---TPIFAasqgwiwtvtLV 279
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLFTTKVAALVLLLFfsgEEILL----------FL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 280 GLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYhyqgddskiyaAAFTAAIFHLINHATFKGALFMITG 359
Cdd:PRK12664 208 GIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSG-----------VAIGILILQIVLSVVYQTLLFMVAD 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 360 AVDHSTGTRDVKKLGGLLTvMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANLFsvdtLGYLFPIIGIvgS 439
Cdd:PRK12664 277 SVINRTRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVL----YKKLFLICSL--L 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 613313568 440 VFTFVySIKFIMHIFFGQYKPEQLPKKaheVSILMLLSPAILATLVIVFGLF 491
Cdd:PRK12664 350 LFASV-GLKFFWYAFISKSKSKPEAEK---VYIGSKLSMIILVLICVVLGMF 397
|
|
| COG1563 |
COG1563 |
Uncharacterized MnhB-related membrane protein [General function prediction only]; |
623-688 |
1.25e-07 |
|
Uncharacterized MnhB-related membrane protein [General function prediction only];
Pssm-ID: 441171 [Multi-domain] Cd Length: 81 Bit Score: 49.80 E-value: 1.25e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613313568 623 IFEVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVES-ISTALFLL 688
Cdd:COG1563 4 LIDLILLALLVISAIAAVLQKDLLAAVILFGIFSLLAALLFVLLGAPDVALTEAAVGAgLSTVLFLL 70
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
111-464 |
2.16e-07 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 54.18 E-value: 2.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 111 FYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQaSIYGAQKSLIIT----VFGGLSLLGGIILLA-I 185
Cdd:CHL00011 114 FYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKK-RLYSATKFILYTaggsIFLLIGVLGMGLYGSnE 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 186 PTQSFSIqymiqhaseIQNSPFFIFAMILIMIGAF----TKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIAR 261
Cdd:CHL00011 193 PTLNFET---------LANQSYPVALEILFYIGFLiayaVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 262 ----MTP----IFAAsqgwiWTVtLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMImaMLGIGAISYhyqgddskiy 333
Cdd:CHL00011 264 inmeLLPhahsIFSP-----WLV-IVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFI--IIGIGSITD---------- 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 334 aAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPISFTItvITALSMA--GVPPFNGFLSkESFLE 411
Cdd:CHL00011 326 -TGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTM--FSSFSMAslALPGMSGFVA-ELIVF 401
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 613313568 412 TTFTASQANLFSVDTLGYLFPIIGIvgsVFTFVYSIKFIMHIFFGqYKPEQLP 464
Cdd:CHL00011 402 FGIITSQKYLLMPKILITFVMAIGM---ILTPIYLLSMLRQMFYG-YKLFNVP 450
|
|
| PRK12507 |
PRK12507 |
putative monovalent cation/H+ antiporter subunit B; Reviewed |
628-801 |
2.55e-07 |
|
putative monovalent cation/H+ antiporter subunit B; Reviewed
Pssm-ID: 237121 [Multi-domain] Cd Length: 332 Bit Score: 53.51 E-value: 2.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 628 IVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNlNRYNEKRSFQL 707
Cdd:PRK12507 15 ILFLLILISIKIIFAKDLLNAVMLTSVFSLLIAVSFLIMDAPDVAMTEAAVGAGLSTCVYLNALKLTG-RLKNIERTKII 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 708 TNALIAGGVGLSVIIIG--LIAYG------NRHfesISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLA 779
Cdd:PRK12507 94 PALLIVLLFGVTLIYMGldLPNYGdddapvHQH---VAKYYIENTSRDIGIPNFVTAILASYRGYDTLGETSVIFIAGIA 170
|
170 180
....*....|....*....|..
gi 613313568 780 VYTMIKLRKKRQTQGNEVKNHE 801
Cdd:PRK12507 171 VLLLLSRKSRRKIPRLDEGSSG 192
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
97-401 |
3.29e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 53.59 E-value: 3.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 97 YSIGYLSKSEQLGNFYCYLLLFMgaMLGVVLSDNVIILYLFWELTSFSSFLLISFW---RER-QASIYgaqkSLIITVFG 172
Cdd:MTH00014 80 FKIFQNNKAPKTFMTNILILNLI--LLLTFSASNLLMFYIFFEASLIPTLFLILGWgyqPERlQASFY----LMIYTVTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 173 GLSLLGGIILLAIPTQSFsiqyMIQHASEIQNSPFFIFAMILIMIGAF-TKSAQFPFYIWLPDA-MEAPTPVSAYLhSAT 250
Cdd:MTH00014 154 SLPLLMSILLIFYTNNSL----SMLMSSMEPPSIYLMNLWWLITILAFmVKMPLYTVHLWLPKAhVEAPVAGSMIL-AGI 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 251 MVKAGLYLIARMTPIF----AASQGWIWTVTLVGLITlfwASLNATKQQDLKGILAFSTVSQLGMIMAmlgiGAISYHYQ 326
Cdd:MTH00014 229 LLKLGGYGLLRMSSLFmhinKSLSAPFSSISLVGAVI---TSLICIRQPDLKSLIAYSSVGHMGLMTA----GIMSNTSW 301
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 613313568 327 GddskiyaaaFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTVMPI-SFTITVITALSMAGVPPFN 401
Cdd:MTH00014 302 G---------WQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTmTMWWFLLSAANMAAPPSIN 368
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-312 |
8.72e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 52.09 E-value: 8.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 111 FYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIyGAQKSLIITVFGGLSLLGGIILLAIPTQSF 190
Cdd:PRK06591 117 FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLI-GAFDYLIMGSIGATLILIAIGFLLSITGSL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 191 SIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQ 270
Cdd:PRK06591 196 NMTDIAAYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYE 275
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 613313568 271 GWIWTVT----LVGLITLFWASLNATKQQDLKGILAFSTVSQLGMI 312
Cdd:PRK06591 276 TIKTAITnfirPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
211-406 |
1.56e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 50.98 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 211 AMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAyLHSATMVKAG----LYLIARMTPIFAASQGWIWTVTLVGlitlfW 286
Cdd:MTH00112 94 SCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTA-LILSTWQKLApltlLLMTSNSLNPTLLLTLAILSTLIGG-----W 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 287 ASLNATKqqdLKGILAFSTVSQLGMIMAMLGIgaisyhyqgdDSKIyaAAFTAAIFHLINHATFkgaLFMITgavdhsTG 366
Cdd:MTH00112 168 GGLNQTQ---LRKIMAFSSIAHLGWMIAIITY----------SPKL--TLLTFYIYILMTTPMF---LTLNT------TS 223
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 613313568 367 TRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSK 406
Cdd:MTH00112 224 TKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPK 263
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
213-460 |
1.57e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 51.78 E-value: 1.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 213 ILIMIGAFTKSAQFPFYIWLPDAME-APTPVSAYLhsATMVKAGLYLIarMTPIFAASQgWIWTVTLVGLITLFWASLNA 291
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYEgAPTPTTALI--AIIPKFTVYIL--LTSLVITSK-LLLSVAIISLVVGAFGALNQ 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 292 TKqqdLKGILAFSTVSQLGMIMamlgIGAISYHYQGddskiYAAAFTAAIFHLINH-ATFKGALFMITGAVDHSTGTRDV 370
Cdd:MTH00198 378 TR---IKRLLAYSGIGHIGFIL----IGVSAGTYES-----LQASWTYAVTYLVSAlASFTVICTLEEFGTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 371 KKLGGL--------LTVMP-----ISFTITVITaLSMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIV 437
Cdd:MTH00198 446 GSFGNYnlvrrlvdLTILSrgqpyIAFSLAIVF-LSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVALFAIICTC 524
|
250 260
....*....|....*....|...
gi 613313568 438 GSVFtfvYSIKFIMHIFFGQYKP 460
Cdd:MTH00198 525 ISAF---YYIRIVATIYFNFTRP 544
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
122-455 |
2.16e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 50.80 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 122 MLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQY--MIQHA 199
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYinLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 200 SEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME-APTPVSAYLhsATMVKAGLYLIarmtpifAASQGWIWTVTL 278
Cdd:MTH00196 86 GQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEgAPTKTTALL--AIVPKLGIFSI-------LVSIGLNVNILL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 279 VG-LITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISyhyqgddskiyaaAFTAAIFHLINHATFKGALFMI 357
Cdd:MTH00196 157 IGgLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFE-------------SIQASLVYLFIYIIMSICVFSI 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 358 TGAVdhSTGTRDVKKLGGLLTVMPISFTITVITALSMAGVPPFNGFLSKESFLettftasqanLFSVDTLGYLFPIIGIV 437
Cdd:MTH00196 224 ILAL--NVYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL----------LSGVVYQYYLIFLLAVF 291
|
330
....*....|....*...
gi 613313568 438 GSVFTFVYSIKFIMHIFF 455
Cdd:MTH00196 292 CSVIAGVYYVRIVKILFF 309
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
90-491 |
2.55e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 50.79 E-value: 2.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 90 IGSLVVLYSIGYLSKSEQLGNFYCYLLLF--MGAMLgVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLI 167
Cdd:MTH00199 77 IGSISILLMGSGETILSEGGQSSPILILIvaLGSLL-LVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFV 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 168 ITVFGGLSLLGGIILLAIPTQSFSIQymiqhasEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAME-APTPVSAYL 246
Cdd:MTH00199 156 LGAVSSGLFLFGCALLYGLTGETSIQ-------GINSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEgAPTITTALL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 247 hsATMVKAGLYLIarMTPIFAASQGWIWTVTLvgliTLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISyhyq 326
Cdd:MTH00199 229 --ATVPKIGVFSI--LVQIGPVTNVVLICAVL----SIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFE---- 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 327 gddskiyaaAFTAAIFHLINHATFKGALFMITGAVDHSTG-TRDVKKLGGLLTVMPISFTITVitaLSMAGVPPFNGFLS 405
Cdd:MTH00199 297 ---------SIQASLIYMIIYVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTF---LSIAGIPPLAGFLS 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 406 KESFLettftasqanLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLV 485
Cdd:MTH00199 365 KWLIL----------LSGVSSGYYLICIIAVLSSVIAGVYYVRVVQIIYFQADYSILIWQKVLKKEERLDLSKSILIGVT 434
|
....*.
gi 613313568 486 IVFGLF 491
Cdd:MTH00199 435 FFIILF 440
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
90-316 |
1.92e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 44.76 E-value: 1.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 90 IGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFW---RER-QASIYgaqkS 165
Cdd:MTH00163 68 ICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWgyqPERlQAGIY----L 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 166 LIITVFGGLSLLGGIILLAIPTQSFSIQYMIqhaseiqNSPFFIFAMILIMIGAF-TKSAQFPFYIWLPDA-MEAPTPVS 243
Cdd:MTH00163 144 LFYTLFASLPLLVGIFYLYNNSGSLSFFLLN-------FFGSLNFLWYLSMILAFlVKMPMFFVHLWLPKAhVEAPVSGS 216
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 613313568 244 AYLhSATMVKAGLYLIARMTPIF---AASQGWIWTVtlVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAML 316
Cdd:MTH00163 217 MIL-AGVLLKLGGYGLLRVMSFFsklGLKFNYIWIS--ISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
229-421 |
2.15e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 44.56 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 229 YIWLPDA-MEAPTPVSAYLhSATMVKAGLYLIARMTPIFAASQGW---------IWTVTLVGLITLfwaslnatKQQDLK 298
Cdd:MTH00127 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRMMVMLDPLTKElsypfiilaLWGIIMTGSICL--------RQTDLK 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 299 GILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLT 378
Cdd:MTH00127 285 SLIAYSSVSHMGLVAGGILIQT-------------PWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQM 351
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 613313568 379 VMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANL 421
Cdd:MTH00127 352 ILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTL 394
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
210-495 |
1.30e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 41.80 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 210 FAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIarmtPIFAASQGWIWTVTLVGLITLFWASL 289
Cdd:MTH00144 85 FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLSALVGSI 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 290 NATKQQDLKGILAFSTVSQLGMIMAMLGIGAISyhyqgddSKIYAAAFTAAIFHLINHATFKGALFMitgavdhstgtrd 369
Cdd:MTH00144 161 GGLNQTQVRALLAYSSISHTGWMLVAILHGSWL-------MWMYFLIYIVSSGFLFFSLWSGDSGSM------------- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 370 vKKLGGLLTVMPISFTITVItALSMAGVPPFNGFLSKESFLettftasqanLFSVDTLGYLFPIIGIVGSVFTFVYSIKF 449
Cdd:MTH00144 221 -KDLGSLKPSYKTGLSIISL-LLSLGGLPPFLGFCSKLLVL----------ISSMESSPLLLILLLLLGSLISLFFYLSV 288
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 613313568 450 IMHIFFGQYKPEQLPKKahevsiLMLLSPAILATLVIVFGLFPGIL 495
Cdd:MTH00144 289 FFSSFLSSSKSKKSNSS------KVLNSSIISLNLLGGLLFLLLYL 328
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
228-399 |
3.43e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 40.67 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 228 FYIWLPDA-MEAPTPVSAYLhSATMVKAGLYLIARMTPIFAASQG---------WIWTVTLVGLITLfwaslnatKQQDL 297
Cdd:MTH00068 212 LHLWLPKAhVEAPIAGSMIL-AAVLLKLGGYGILRISILLTPLSKelsypfiilALWGVLMTSLICL--------RQTDL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613313568 298 KGILAFSTVSQLGMIMAMLGIGAisyhyqgddskiyAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLL 377
Cdd:MTH00068 283 KSLIAYSSVSHMGLVIAAALIQT-------------PWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQ 349
|
170 180
....*....|....*....|..
gi 613313568 378 TVMPISFTITVITALSMAGVPP 399
Cdd:MTH00068 350 TILPLMATWWLLSNLSNMALPP 371
|
|
| |
