|
Name |
Accession |
Description |
Interval |
E-value |
| MSCRAMM_SdrD |
NF012181 |
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal ... |
1-935 |
5.28e-150 |
|
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.
Pssm-ID: 467951 [Multi-domain] Cd Length: 1379 Bit Score: 479.69 E-value: 5.28e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 1 MINRDNKKAITKKGMISNRLNKFSIRKYTVGTASILVGTTLIFGLGNQEAKAAENTSTEnAKQDEASASDNKEvvseten 80
Cdd:NF012181 1 MLNRENKTAITRKGMVSNRLNKFSIRKYTVGTASILVGTTLIFGLGNQEAKAAESTNKE-LNEATTSASDNQS------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 81 nsttentstnpikkETNTDSQPETKEESTTSSTQKQ--QNNVTATTETKPQNIEKENVKPSTDKTAtEDTSVILEEKKAP 158
Cdd:NF012181 73 --------------SSKVDNQQLNQEDNTKNDNQKEmvSSQGNETTSNGNKSIEKESVQSTTGNKV-EVSTAKSDEQASP 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 159 NNTNNDVTTKPSTSEIQTKPTTPQESTNIENSQPqptpSKVDNQVTDATNPKEPVNVSKEELKNNPEKLkelVRNDSNTD 238
Cdd:NF012181 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNVQP----TNEENKKVDAKTESTTLNVKSDAIKSNAETL---VDNNSNSN 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 239 RSTKPVATAPTSVAPKRLNAKMRFAVAQPAAVASNNVNDLI-KVTKQTIKVGDGKDDVVAAHDgeEIEYDSEFTIDNKVK 317
Cdd:NF012181 211 NENNADIILPKSTAPKRLNTRMRMAAVQPSSTDSKNVNDLItSNTTLTVVDADKNNKIVPAQD--YLSLKSQITVDDKVK 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 318 AGDTMTINYDKNVIPSDLT--DKNDPIDITDPS-GEVIAKGTFDKATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKTVP 394
Cdd:NF012181 289 SGDYFTIKYSDTVQVYGLNpeDIKNIGDIKDPNnGETIATAKHDTANNLITYTFTDYVDRFNSVQMGINYSIYMDADTIP 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 395 ---NETSLNLTFATAGKETSQNVtvDYQDPMVHGDSNIQSIFTKL------DEDKQNIEQQIYVNPLKKTATNTKVDIAG 465
Cdd:NF012181 369 vskNDVEFNVTIGNTTTKTTANI--QYPDYVSRDNNSIGSAFTETvshagnAEDPGYYKQTVYVNPSEKSLTNAKLKVEA 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 466 SQVD----------------------------------------------------------DYGNI------------- 474
Cdd:NF012181 447 YHKDypdnvgqinkdvtkikiyqapkdyvlnkgydvntnqlidvteqfkdkitygandsvnvDFGSInnsyvvmvdtkfe 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 475 --------------------------------------------KLGN----------------------GSTIIDQNTE 488
Cdd:NF012181 527 yttsesptlvqmatlssdgnksvstgnalgftnnqsggagqevyKIGNyvwedtnkngvqelgevgvkgvTVVVYDNKTN 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 489 IKVYKVNSNQQ-------LPQSNRIYDFSQ----YEDVTS-QFDNKKSFSNNVATL-----------DFGNIDSAYII-- 543
Cdd:NF012181 607 KEVGRTITDEKggylipnLPNGDYRVEFSNlpqgYEVTPSkQGNNEELDSNGVSSVitvngkdnlsaDLGIYKPKYNLgd 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 544 ----------------KVVSKYTPTSDDELDiaQGASMRTTDKNNYYNYAGYSN------------FIVTSTDTGGGD-- 593
Cdd:NF012181 687 yvwedtnkngiqdqdeKGISGVTVTLKDENG--NVLKTVTTDADGKYKFTDLDNgnykvefttpegYTPTTVTSGSDIek 764
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 594 --------GTVKPEEKL-----------YKIGDYVWEDVDKDGVQgtDSKEKPMANVLVTLTYPDGTT-KSVRTDANGHY 653
Cdd:NF012181 765 dsngltttGVINGADNMtldsgfyktpkYNLGNYVWEDTNKDGKQ--DSTEKGISGVTVTLKNENGEVlQTTKTDKDGKY 842
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 654 EFGGLKDGeTYTVKFETPAGYLPTKENGTTDGEKDSNGSSVTVKINGKDDMSLDTGFYKePKYNLGDYVWEDTNKDGIQD 733
Cdd:NF012181 843 QFTGLENG-TYKVEFETPSGYTPTQVGSGTDEGIDSNGTSTTGVIKDKDNDTIDSGFYK-PTYNLGDYVWEDTNKNGVQD 920
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 734 ANEPGIKDVKVTLKDSTGKIIGTTTTDASGKYKFTDLDNGNYTVEFETPAGYTPT-LKNTTAEDKDSNGLTTTGVIKDAD 812
Cdd:NF012181 921 KDEKGISGVTVTLKDENDKVLKTVTTDENGKYQFTDLNNGTYKVEFETPSGYTPTsVTSGNDTEKDSNGLTTTGVIKDAD 1000
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 813 NMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKP 892
Cdd:NF012181 1001 NMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVKVTLLNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKP 1080
|
1130 1140 1150 1160
....*....|....*....|....*....|....*....|...
gi 613254167 893 AGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTIDNGYFEEDT 935
Cdd:NF012181 1081 AGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTLDNGYFEEET 1123
|
|
| SdrD_B |
pfam17210 |
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ... |
826-930 |
1.50e-34 |
|
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.
Pssm-ID: 435789 [Multi-domain] Cd Length: 112 Bit Score: 127.72 E-value: 1.50e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 826 YSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQTGTNTTED 905
Cdd:pfam17210 1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80
|
90 100 110
....*....|....*....|....*....|..
gi 613254167 906 D-KDADGGEVDVTITD------HDDFTIDNGY 930
Cdd:pfam17210 81 DaLDSDADPATGLTATvtlasgESDLTIDAGL 112
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
22-598 |
1.32e-30 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 130.41 E-value: 1.32e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 22 KFSIRKYTVGTASILVGTTLIFGL-GNQEAKAAENTSTENAKQDEASASDNKEVVSET----ENNSTTENTSTNPIKKET 96
Cdd:NF033609 8 KHAIRKKSIGVASVLVGTLIGFGLlSSKEADASENSVTQSDSASNESKSNDSSSVSAApktdDTNVSDTKTSSNTNNGET 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 97 NTDSQPETKEESTTSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVIleekkapNNTNNDVTTKPSTSeiQT 176
Cdd:NF033609 88 SVAQNPAQQETTQSASTNATTEETPVTGEATTTATNQANTPATTQSSNTNAEELV-------NQTSNETTSNDTNT--VS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 177 KPTTPQESTNIENSQpqpTPSKVDNQVTDATNPKEPvnvskeelknnpeklkelvrndSNTDRSTKPVATAPTSVAPKRL 256
Cdd:NF033609 159 SVNSPQNSTNAENVS---TTQDTSTEATPSNNESAP----------------------QSTDASNKDVVNQAVNTSAPRM 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 257 NAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDgkddVVAAHDGEEIEYDSEFTIDNKVKAGDTMTINYDK--NVIPSD 334
Cdd:NF033609 214 RAFSLAAVAADAPAAGTDITNQLTNVTVGIDSGT----TVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKelNLNGVT 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 335 LTDKNDPIDITDpsgEVIAKGTFDkATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKTVPNETSLNLTFATAGKETSQNV 414
Cdd:NF033609 290 STAKVPPIMAGD---QVLANGVID-SDGNVIYTFTDYVDTKEDVKATLTMPAYIDPENVTKTGNVTLTTGIGSTTANKTV 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 415 TVDYQDPMVHGDSNIQSIFTKLDEDKQNIEQQIYVNPLKKTATNTKVDiagsqvddyGNIKLGNGST--IIDQNTEIKVY 492
Cdd:NF033609 366 LVDYEKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLT---------GNLKPNTDSNalIDQQNTSIKVY 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 493 KVNSNQQLPQSNRIyDFSQYEDVTSQ----FDNKKSFSNNVATLDfGNIDSAYIIKVVSKYTPTSDDelDIAQGASMRTT 568
Cdd:NF033609 437 KVDNAADLSESYFV-NPENFEDVTNSvnitFPNPNQYKVEFNTPD-DQITTPYIVVVNGHIDPNSKG--DLALRSTLYGY 512
|
570 580 590
....*....|....*....|....*....|
gi 613254167 569 DKNNYYNYAGYSNFIVTSTDTGGGDGTVKP 598
Cdd:NF033609 513 NSNIIWRSMSWDNEVAFNNGSGSGDGIDKP 542
|
|
| YSIRK_signal |
TIGR01168 |
Gram-positive signal peptide, YSIRK family; Many surface proteins found in Streptococcus, ... |
18-55 |
1.98e-07 |
|
Gram-positive signal peptide, YSIRK family; Many surface proteins found in Streptococcus, Staphylococcus, and related lineages share apparently homologous signal sequences. A motif resembling [YF]SIRKxxxGxxS[VIA] appears at the start of the transmembrane domain. The GxxS motif appears perfectly conserved, suggesting a specific function and not just homology. There is a strong correlation between proteins carrying this region at the N-terminus and those carrying the Gram-positive anchor domain with the LPXTG sortase processing site at the C-terminus.
Pssm-ID: 273479 [Multi-domain] Cd Length: 39 Bit Score: 47.86 E-value: 1.98e-07
10 20 30
....*....|....*....|....*....|....*...
gi 613254167 18 NRLNKFSIRKYTVGTASILVGtTLIFGLGnqeAKAAEN 55
Cdd:TIGR01168 6 EKQQKYSIRKLSVGVASVLVA-SLFFGGG---VAAAES 39
|
|
| ClfA |
COG4932 |
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ... |
626-935 |
2.18e-06 |
|
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443959 [Multi-domain] Cd Length: 689 Bit Score: 51.51 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 626 KPMANVLVTLTYPDG----TTKSVRTDANGHYEFGGLKDGETYTVKFETPAGYLPtkengttdgekDSNGSSVTVKINGK 701
Cdd:COG4932 275 EPLAGATFTLTDADGntvvTTTVTVTDADGSYTFTDLPPGTYTVTETKAPAGYDL-----------DGEAVKVTITAGQT 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 702 DDMSLDTGFYKEPKYNLgdyVWEDTNKDGiqdaNEPGIKDVKVTLKDSTGKIIGTTTTDASGKYKFTDLDNGNYTVEF-E 780
Cdd:COG4932 344 TTVTVTNGNNEVKTGSV---TLTKVDADD----GEAPLAGAEFTLTDADGTVVATITTDADGTASFKGLAPGTYTLTEtK 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 781 TPAGYTPTLKNTTAEDKDsNGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEK 860
Cdd:COG4932 417 APEGYTLDSTPITVTVTD-GGTGAIDTITNERKKGSVQVTKVDAPLAGATFTLTDADGTVVTLTTDADLAGATFEADGKV 495
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 613254167 861 gevigTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTIDNGYFEEDT 935
Cdd:COG4932 496 -----VTTTDASGKYTFKNLPPGTYTDAGGSATVITDDTDGTVGDEATGTDPEVTVTGKSTTTTPDVALLTNLGT 565
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
117-243 |
1.34e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 45.73 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 117 QNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEIQTKPTTPQESTNIENSQPQPTP 196
Cdd:PTZ00441 327 QDPVPPPNEGKDGNPNEENLFPPGDDEVPDESNVPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPEQEPNIPEDSNKEVP 406
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 613254167 197 SKV--------DNQVTDATNPKE-----PVNVSKEELKN-----NPEKLKELVRNDSNTDRSTKP 243
Cdd:PTZ00441 407 EDVpmepeddrDNNFNEPKKPENkgdgqNEPVIPKPLDNerdqsNKNKQVNPGNRHNSEDRYTRP 471
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
17-228 |
2.88e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.76 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 17 SNRLNKFSIRKYTVGTASILVGtTLIFGlgnqeakaAENTSTENAKQDEASASDNKEVVSETENNSTTeNTSTNPIKKET 96
Cdd:NF033839 6 HERKMRYSIRKFSIGVASVAVA-SLFMG--------SVVHATEKEGSTQAATSSNRGNESQAEQRKEL-DLERDKAKKAV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 97 nTDSQPETKEESTTSSTQKQQNNvTATTETKPQNIEKENVKPSTDKTATEDTSVILEEK-----KAPNNTNNDVTTKpST 171
Cdd:NF033839 76 -SEYKEKKVKEIYKKSTKERHKN-TVDLVNKLQNIKNEYLNKIVESTSKSQLQKLMMESqskvdEAVSKFEKDSSSS-SS 152
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 613254167 172 SEIQTKPTTPQEstniENSQPQ-PTPSKVDNQVTDATNPKEPvnvSKEELKNNPEKLK 228
Cdd:NF033839 153 SGSSTKPETPQP----ENPEHQkPTTPAPDTKPSPQPEGKKP---SVPDINQEKEKAK 203
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
17-243 |
2.75e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 17 SNRLNKFSIRKYTVGTASILVGTTLIFGLGNQEAKAAENTSTENAKQDEASASDNKEV-------VSETENNST----TE 85
Cdd:NF033838 6 SERKVHYSIRKFSIGVASVVVASLFLGGVVHAEEVRGGNNPTVTSSGNESQKEHAKEVeshlekiLSEIQKSLDkrkhTQ 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 86 NTSTNPIKKETNTD---SQPETKEESTTSSTQKQQNNVTATTEtkpqNIEKENVKPsTDKTATEDTSVILEEKKA----- 157
Cdd:NF033838 86 NVALNKKLSDIKTEylyELNVLKEKSEAELTSKTKKELDAAFE----QFKKDTLEP-GKKVAEATKKVEEAEKKAkdqke 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 158 ------PNNT---------NNDVTTKPSTSE-IQTKPTTPQESTNIENSQpqptpSKVDNQVTDAT---NPKEPVNVSKE 218
Cdd:NF033838 161 edrrnyPTNTyktleleiaESDVEVKKAELElVKEEAKEPRDEEKIKQAK-----AKVESKKAEATrleKIKTDREKAEE 235
|
250 260
....*....|....*....|....*.
gi 613254167 219 ELKNNPE-KLKELVRNDSNTDRSTKP 243
Cdd:NF033838 236 EAKRRADaKLKEAVEKNVATSEQDKP 261
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MSCRAMM_SdrD |
NF012181 |
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal ... |
1-935 |
5.28e-150 |
|
MSCRAMM family adhesin SdrD; Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.
Pssm-ID: 467951 [Multi-domain] Cd Length: 1379 Bit Score: 479.69 E-value: 5.28e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 1 MINRDNKKAITKKGMISNRLNKFSIRKYTVGTASILVGTTLIFGLGNQEAKAAENTSTEnAKQDEASASDNKEvvseten 80
Cdd:NF012181 1 MLNRENKTAITRKGMVSNRLNKFSIRKYTVGTASILVGTTLIFGLGNQEAKAAESTNKE-LNEATTSASDNQS------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 81 nsttentstnpikkETNTDSQPETKEESTTSSTQKQ--QNNVTATTETKPQNIEKENVKPSTDKTAtEDTSVILEEKKAP 158
Cdd:NF012181 73 --------------SSKVDNQQLNQEDNTKNDNQKEmvSSQGNETTSNGNKSIEKESVQSTTGNKV-EVSTAKSDEQASP 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 159 NNTNNDVTTKPSTSEIQTKPTTPQESTNIENSQPqptpSKVDNQVTDATNPKEPVNVSKEELKNNPEKLkelVRNDSNTD 238
Cdd:NF012181 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNVQP----TNEENKKVDAKTESTTLNVKSDAIKSNAETL---VDNNSNSN 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 239 RSTKPVATAPTSVAPKRLNAKMRFAVAQPAAVASNNVNDLI-KVTKQTIKVGDGKDDVVAAHDgeEIEYDSEFTIDNKVK 317
Cdd:NF012181 211 NENNADIILPKSTAPKRLNTRMRMAAVQPSSTDSKNVNDLItSNTTLTVVDADKNNKIVPAQD--YLSLKSQITVDDKVK 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 318 AGDTMTINYDKNVIPSDLT--DKNDPIDITDPS-GEVIAKGTFDKATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKTVP 394
Cdd:NF012181 289 SGDYFTIKYSDTVQVYGLNpeDIKNIGDIKDPNnGETIATAKHDTANNLITYTFTDYVDRFNSVQMGINYSIYMDADTIP 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 395 ---NETSLNLTFATAGKETSQNVtvDYQDPMVHGDSNIQSIFTKL------DEDKQNIEQQIYVNPLKKTATNTKVDIAG 465
Cdd:NF012181 369 vskNDVEFNVTIGNTTTKTTANI--QYPDYVSRDNNSIGSAFTETvshagnAEDPGYYKQTVYVNPSEKSLTNAKLKVEA 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 466 SQVD----------------------------------------------------------DYGNI------------- 474
Cdd:NF012181 447 YHKDypdnvgqinkdvtkikiyqapkdyvlnkgydvntnqlidvteqfkdkitygandsvnvDFGSInnsyvvmvdtkfe 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 475 --------------------------------------------KLGN----------------------GSTIIDQNTE 488
Cdd:NF012181 527 yttsesptlvqmatlssdgnksvstgnalgftnnqsggagqevyKIGNyvwedtnkngvqelgevgvkgvTVVVYDNKTN 606
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 489 IKVYKVNSNQQ-------LPQSNRIYDFSQ----YEDVTS-QFDNKKSFSNNVATL-----------DFGNIDSAYII-- 543
Cdd:NF012181 607 KEVGRTITDEKggylipnLPNGDYRVEFSNlpqgYEVTPSkQGNNEELDSNGVSSVitvngkdnlsaDLGIYKPKYNLgd 686
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 544 ----------------KVVSKYTPTSDDELDiaQGASMRTTDKNNYYNYAGYSN------------FIVTSTDTGGGD-- 593
Cdd:NF012181 687 yvwedtnkngiqdqdeKGISGVTVTLKDENG--NVLKTVTTDADGKYKFTDLDNgnykvefttpegYTPTTVTSGSDIek 764
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 594 --------GTVKPEEKL-----------YKIGDYVWEDVDKDGVQgtDSKEKPMANVLVTLTYPDGTT-KSVRTDANGHY 653
Cdd:NF012181 765 dsngltttGVINGADNMtldsgfyktpkYNLGNYVWEDTNKDGKQ--DSTEKGISGVTVTLKNENGEVlQTTKTDKDGKY 842
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 654 EFGGLKDGeTYTVKFETPAGYLPTKENGTTDGEKDSNGSSVTVKINGKDDMSLDTGFYKePKYNLGDYVWEDTNKDGIQD 733
Cdd:NF012181 843 QFTGLENG-TYKVEFETPSGYTPTQVGSGTDEGIDSNGTSTTGVIKDKDNDTIDSGFYK-PTYNLGDYVWEDTNKNGVQD 920
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 734 ANEPGIKDVKVTLKDSTGKIIGTTTTDASGKYKFTDLDNGNYTVEFETPAGYTPT-LKNTTAEDKDSNGLTTTGVIKDAD 812
Cdd:NF012181 921 KDEKGISGVTVTLKDENDKVLKTVTTDENGKYQFTDLNNGTYKVEFETPSGYTPTsVTSGNDTEKDSNGLTTTGVIKDAD 1000
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 813 NMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKP 892
Cdd:NF012181 1001 NMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVKVTLLNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKP 1080
|
1130 1140 1150 1160
....*....|....*....|....*....|....*....|...
gi 613254167 893 AGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTIDNGYFEEDT 935
Cdd:NF012181 1081 AGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTLDNGYFEEET 1123
|
|
| SdrD_B |
pfam17210 |
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ... |
826-930 |
1.50e-34 |
|
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.
Pssm-ID: 435789 [Multi-domain] Cd Length: 112 Bit Score: 127.72 E-value: 1.50e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 826 YSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQTGTNTTED 905
Cdd:pfam17210 1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80
|
90 100 110
....*....|....*....|....*....|..
gi 613254167 906 D-KDADGGEVDVTITD------HDDFTIDNGY 930
Cdd:pfam17210 81 DaLDSDADPATGLTATvtlasgESDLTIDAGL 112
|
|
| SdrD_B |
pfam17210 |
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ... |
716-820 |
2.62e-31 |
|
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.
Pssm-ID: 435789 [Multi-domain] Cd Length: 112 Bit Score: 118.47 E-value: 2.62e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 716 YNLGDYVWEDTNKDGIQDANEPGIKDVKVTLKDSTGKIIGTTTTDASGKYKFTDLDNGNYTVEFETPAGYTPTLKNTTAE 795
Cdd:pfam17210 1 ASIGDFVWEDANKNGIQDAGEPGISGVTVTLYDANGTVVGTTTTDANGKYLFTNLAPGTYYVEFTAPAGYTFTPQNQGSD 80
|
90 100 110
....*....|....*....|....*....|..
gi 613254167 796 D-KDSNGLTTTGVIKD------ADNMTLDSGF 820
Cdd:pfam17210 81 DaLDSDADPATGLTATvtlasgESDLTIDAGL 112
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
22-598 |
1.32e-30 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 130.41 E-value: 1.32e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 22 KFSIRKYTVGTASILVGTTLIFGL-GNQEAKAAENTSTENAKQDEASASDNKEVVSET----ENNSTTENTSTNPIKKET 96
Cdd:NF033609 8 KHAIRKKSIGVASVLVGTLIGFGLlSSKEADASENSVTQSDSASNESKSNDSSSVSAApktdDTNVSDTKTSSNTNNGET 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 97 NTDSQPETKEESTTSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVIleekkapNNTNNDVTTKPSTSeiQT 176
Cdd:NF033609 88 SVAQNPAQQETTQSASTNATTEETPVTGEATTTATNQANTPATTQSSNTNAEELV-------NQTSNETTSNDTNT--VS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 177 KPTTPQESTNIENSQpqpTPSKVDNQVTDATNPKEPvnvskeelknnpeklkelvrndSNTDRSTKPVATAPTSVAPKRL 256
Cdd:NF033609 159 SVNSPQNSTNAENVS---TTQDTSTEATPSNNESAP----------------------QSTDASNKDVVNQAVNTSAPRM 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 257 NAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDgkddVVAAHDGEEIEYDSEFTIDNKVKAGDTMTINYDK--NVIPSD 334
Cdd:NF033609 214 RAFSLAAVAADAPAAGTDITNQLTNVTVGIDSGT----TVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKelNLNGVT 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 335 LTDKNDPIDITDpsgEVIAKGTFDkATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKTVPNETSLNLTFATAGKETSQNV 414
Cdd:NF033609 290 STAKVPPIMAGD---QVLANGVID-SDGNVIYTFTDYVDTKEDVKATLTMPAYIDPENVTKTGNVTLTTGIGSTTANKTV 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 415 TVDYQDPMVHGDSNIQSIFTKLDEDKQNIEQQIYVNPLKKTATNTKVDiagsqvddyGNIKLGNGST--IIDQNTEIKVY 492
Cdd:NF033609 366 LVDYEKYGKFYNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVIAPVLT---------GNLKPNTDSNalIDQQNTSIKVY 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 493 KVNSNQQLPQSNRIyDFSQYEDVTSQ----FDNKKSFSNNVATLDfGNIDSAYIIKVVSKYTPTSDDelDIAQGASMRTT 568
Cdd:NF033609 437 KVDNAADLSESYFV-NPENFEDVTNSvnitFPNPNQYKVEFNTPD-DQITTPYIVVVNGHIDPNSKG--DLALRSTLYGY 512
|
570 580 590
....*....|....*....|....*....|
gi 613254167 569 DKNNYYNYAGYSNFIVTSTDTGGGDGTVKP 598
Cdd:NF033609 513 NSNIIWRSMSWDNEVAFNNGSGSGDGIDKP 542
|
|
| SdrD_B |
pfam17210 |
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This ... |
603-710 |
1.34e-23 |
|
SdrD B-like domain; This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.
Pssm-ID: 435789 [Multi-domain] Cd Length: 112 Bit Score: 96.52 E-value: 1.34e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 603 YKIGDYVWEDVDKDGVQgtDSKEKPMANVLVTLTYPDGTT-KSVRTDANGHYEFGGLKDGeTYTVKFETPAGYLPTKENG 681
Cdd:pfam17210 1 ASIGDFVWEDANKNGIQ--DAGEPGISGVTVTLYDANGTVvGTTTTDANGKYLFTNLAPG-TYYVEFTAPAGYTFTPQNQ 77
|
90 100 110
....*....|....*....|....*....|....*
gi 613254167 682 TTDGEKDSNGSSVTVKIN------GKDDMSLDTGF 710
Cdd:pfam17210 78 GSDDALDSDADPATGLTAtvtlasGESDLTIDAGL 112
|
|
| Big_8 |
pfam17961 |
Bacterial Ig domain; This entry represents a bacterial Ig-fold domain that is found in a wide ... |
299-397 |
1.19e-22 |
|
Bacterial Ig domain; This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.
Pssm-ID: 465589 [Multi-domain] Cd Length: 102 Bit Score: 93.44 E-value: 1.19e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 299 HDGEEIEYDSEFTIDNKVKAGDTMTINYDKNVIPSDLTDKNDPIDITDPSGEVIAKGTFDKATKQITYTFTDYVDKYEDI 378
Cdd:pfam17961 3 DQGESLKLKADFSLGDSVKEGDYFTIKLPDNLKFYGINTSDKSFDIKDDNGEVIAKGTYDPGTGTITYTFTDYVENKSNI 82
|
90
....*....|....*....
gi 613254167 379 KSRLTLYSYIDKKTVPNET 397
Cdd:pfam17961 83 KGSLYLPAYIDKKKVKENG 101
|
|
| SdrG_C_C |
pfam10425 |
C-terminus of bacterial fibrinogen-binding adhesin; This is the C-terminal half of a bacterial ... |
428-581 |
6.99e-21 |
|
C-terminus of bacterial fibrinogen-binding adhesin; This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.
Pssm-ID: 431277 [Multi-domain] Cd Length: 156 Bit Score: 90.17 E-value: 6.99e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 428 NIQSIFTKLDEDKQNIEQQIYVNPLKKTATNTKVDiagsqvddyGNIKLGN--GSTIIDQNTEIKVYKVNSNQQLPQSNR 505
Cdd:pfam10425 7 NISSRIMHFDKENGTFEQTIYVNPNKKSLTSATVT---------GNLSGYIdsGSKVNPNNTNVKIYKVNDGQDLPDSYY 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 506 I-YDFSQYEDVTSQFDNKKSF-SNNVATLDFGNI--DSAYIIKVVSKYTPTSDDELDIAQGASMRTTDkNNYYNYAGYSN 581
Cdd:pfam10425 78 VnEDTSELEDVTNQFDGYISLgNNNSASINFGNLqsDKSYIVKVVGKYDNNNDDSVDLRTTLYGYNTQ-YVTSYSYGWTN 156
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
843-919 |
1.08e-08 |
|
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 53.05 E-value: 1.08e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613254167 843 DSTEKGIKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQTGTNTTEDdkdaDGGEVDVTIT 919
Cdd:pfam13620 8 DPSGAPVPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTVTVSAPGFKTATRTGVTVT----AGQTTTLDVT 80
|
|
| YSIRK_signal |
pfam04650 |
YSIRK type signal peptide; Many surface proteins found in Streptococcus, Staphylococcus, and ... |
18-43 |
1.11e-08 |
|
YSIRK type signal peptide; Many surface proteins found in Streptococcus, Staphylococcus, and related lineages share apparently homologous signal sequences. A motif resembling [YF]SIRKxxxGxxS[VIA] appears at the start of the transmembrane domain. The GxxS motif appears perfectly conserved, suggesting a specific function and not just homology. There is a strong correlation between proteins carrying this region at the N-terminus and those carrying the Gram-positive anchor domain with the LPXTG sortase processing site at the C-terminus.
Pssm-ID: 428049 [Multi-domain] Cd Length: 26 Bit Score: 51.23 E-value: 1.11e-08
|
| YSIRK_signal |
TIGR01168 |
Gram-positive signal peptide, YSIRK family; Many surface proteins found in Streptococcus, ... |
18-55 |
1.98e-07 |
|
Gram-positive signal peptide, YSIRK family; Many surface proteins found in Streptococcus, Staphylococcus, and related lineages share apparently homologous signal sequences. A motif resembling [YF]SIRKxxxGxxS[VIA] appears at the start of the transmembrane domain. The GxxS motif appears perfectly conserved, suggesting a specific function and not just homology. There is a strong correlation between proteins carrying this region at the N-terminus and those carrying the Gram-positive anchor domain with the LPXTG sortase processing site at the C-terminus.
Pssm-ID: 273479 [Multi-domain] Cd Length: 39 Bit Score: 47.86 E-value: 1.98e-07
10 20 30
....*....|....*....|....*....|....*...
gi 613254167 18 NRLNKFSIRKYTVGTASILVGtTLIFGLGnqeAKAAEN 55
Cdd:TIGR01168 6 EKQQKYSIRKLSVGVASVLVA-SLFFGGG---VAAAES 39
|
|
| ClfA |
COG4932 |
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ... |
626-935 |
2.18e-06 |
|
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443959 [Multi-domain] Cd Length: 689 Bit Score: 51.51 E-value: 2.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 626 KPMANVLVTLTYPDG----TTKSVRTDANGHYEFGGLKDGETYTVKFETPAGYLPtkengttdgekDSNGSSVTVKINGK 701
Cdd:COG4932 275 EPLAGATFTLTDADGntvvTTTVTVTDADGSYTFTDLPPGTYTVTETKAPAGYDL-----------DGEAVKVTITAGQT 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 702 DDMSLDTGFYKEPKYNLgdyVWEDTNKDGiqdaNEPGIKDVKVTLKDSTGKIIGTTTTDASGKYKFTDLDNGNYTVEF-E 780
Cdd:COG4932 344 TTVTVTNGNNEVKTGSV---TLTKVDADD----GEAPLAGAEFTLTDADGTVVATITTDADGTASFKGLAPGTYTLTEtK 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 781 TPAGYTPTLKNTTAEDKDsNGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEK 860
Cdd:COG4932 417 APEGYTLDSTPITVTVTD-GGTGAIDTITNERKKGSVQVTKVDAPLAGATFTLTDADGTVVTLTTDADLAGATFEADGKV 495
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 613254167 861 gevigTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTIDNGYFEEDT 935
Cdd:COG4932 496 -----VTTTDASGKYTFKNLPPGTYTDAGGSATVITDDTDGTVGDEATGTDPEVTVTGKSTTTTPDVALLTNLGT 565
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
617-683 |
3.46e-06 |
|
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 45.73 E-value: 3.46e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 617 GVQGT--DSKEKPMANVLVTLTYPD-GTTKSVRTDANGHYEFGGLKDGeTYTVKFETPaGYLPTKENGTT 683
Cdd:pfam13620 1 TISGTvtDPSGAPVPGATVTVTNTDtGTVRTTTTDADGRYRFPGLPPG-TYTVTVSAP-GFKTATRTGVT 68
|
|
| PTZ00441 |
PTZ00441 |
sporozoite surface protein 2 (SSP2); Provisional |
117-243 |
1.34e-04 |
|
sporozoite surface protein 2 (SSP2); Provisional
Pssm-ID: 240420 [Multi-domain] Cd Length: 576 Bit Score: 45.73 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 117 QNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEIQTKPTTPQESTNIENSQPQPTP 196
Cdd:PTZ00441 327 QDPVPPPNEGKDGNPNEENLFPPGDDEVPDESNVPPNPPNVPGGSNSEFSSDVENPPNPPNPDIPEQEPNIPEDSNKEVP 406
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 613254167 197 SKV--------DNQVTDATNPKE-----PVNVSKEELKN-----NPEKLKELVRNDSNTDRSTKP 243
Cdd:PTZ00441 407 EDVpmepeddrDNNFNEPKKPENkgdgqNEPVIPKPLDNerdqsNKNKQVNPGNRHNSEDRYTRP 471
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
17-228 |
2.88e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.76 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 17 SNRLNKFSIRKYTVGTASILVGtTLIFGlgnqeakaAENTSTENAKQDEASASDNKEVVSETENNSTTeNTSTNPIKKET 96
Cdd:NF033839 6 HERKMRYSIRKFSIGVASVAVA-SLFMG--------SVVHATEKEGSTQAATSSNRGNESQAEQRKEL-DLERDKAKKAV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 97 nTDSQPETKEESTTSSTQKQQNNvTATTETKPQNIEKENVKPSTDKTATEDTSVILEEK-----KAPNNTNNDVTTKpST 171
Cdd:NF033839 76 -SEYKEKKVKEIYKKSTKERHKN-TVDLVNKLQNIKNEYLNKIVESTSKSQLQKLMMESqskvdEAVSKFEKDSSSS-SS 152
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 613254167 172 SEIQTKPTTPQEstniENSQPQ-PTPSKVDNQVTDATNPKEPvnvSKEELKNNPEKLK 228
Cdd:NF033839 153 SGSSTKPETPQP----ENPEHQkPTTPAPDTKPSPQPEGKKP---SVPDINQEKEKAK 203
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
71-225 |
4.03e-04 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 43.88 E-value: 4.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 71 NKEVVSETENNSTTENTSTNPIKKETNTDSQPETKEESTTSSTQKQQNNVTATTE--TKPQNIEKENVKPSTDKTATEDT 148
Cdd:pfam05539 168 PKTAVTTSKTTSWPTEVSHPTYPSQVTPQSQPATQGHQTATANQRLSSTEPVGTQgtTTSSNPEPQTEPPPSQRGPSGSP 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 149 SVILEEKKAPNNTNND-------VTTKPSTSEIQT--KPTTPQESTNIENSQpQPTPSkvdNQVTDATNPKEPvNVSKEE 219
Cdd:pfam05539 248 QHPPSTTSQDQSTTGDgqehtqrRKTPPATSNRRSphSTATPPPTTKRQETG-RPTPR---PTATTQSGSSPP-HSSPPG 322
|
....*.
gi 613254167 220 LKNNPE 225
Cdd:pfam05539 323 VQANPT 328
|
|
| Caldesmon |
pfam02029 |
Caldesmon; |
44-229 |
4.53e-04 |
|
Caldesmon;
Pssm-ID: 460421 [Multi-domain] Cd Length: 495 Bit Score: 44.09 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 44 GLGNQEAKAAENT------STENAKQDEASASDNKEVVSETENNSTTEnTSTNPIKKETNTDSQPETKEESTTSSTQKQQ 117
Cdd:pfam02029 63 AFLDRTAKREERRqkrlqeALERQKEFDPTIADEKESVAERKENNEEE-ENSSWEKEEKRDSRLGRYKEEETEIREKEYQ 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 118 NN-------------------VTATTETKPQNIEKENVK---PSTDKTATEDTSVILEEKKAPNNtnndvtTKPSTSEIQ 175
Cdd:pfam02029 142 ENkwstevrqaeeegeeeedkSEEAEEVPTENFAKEEVKdekIKKEKKVKYESKVFLDQKRGHPE------VKSQNGEEE 215
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 613254167 176 TKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNP-EKLKE 229
Cdd:pfam02029 216 VTKLKVTTKRRQGGLSQSQEREEEAEVFLEAEQKLEELRRRRQEKESEEfEKLRQ 270
|
|
| ClfA |
COG4932 |
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing ... |
584-925 |
7.09e-04 |
|
Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443959 [Multi-domain] Cd Length: 689 Bit Score: 43.42 E-value: 7.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 584 VTSTDTGGGDGTVKPEEKLYKIGDYVWEDVDKDgvqgtdSKEKPMANVLVTLTYPDGTT-KSVRTDANGHYEFGGLKDGe 662
Cdd:COG4932 336 VTITAGQTTTVTVTNGNNEVKTGSVTLTKVDAD------DGEAPLAGAEFTLTDADGTVvATITTDADGTASFKGLAPG- 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 663 TYTVKF-ETPAGYLPTKENGTTDGEKDSNGSSVTVKINGKDDMslDTGFYKEPKYNLGDYVWEDTNKDGIQDANEPGIKD 741
Cdd:COG4932 409 TYTLTEtKAPEGYTLDSTPITVTVTDGGTGAIDTITNERKKGS--VQVTKVDAPLAGATFTLTDADGTVVTLTTDADLAG 486
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 742 VKVTLKDSTGKIIgttttDASGKYKFTDLDNGNYTVEFETPAGYTPTLKNTTAEDKDSNGLTTTGVIKD---ADNMTLDS 818
Cdd:COG4932 487 ATFEADGKVVTTT-----DASGKYTFKNLPPGTYTDAGGSATVITDDTDGTVGDEATGTDPEVTVTGKStttTPDVALLT 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 819 GFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGKYKVIFEKPAGLTQT 898
Cdd:COG4932 562 NLGTTEDALTSLAKTGDEVGKGLTLTTTTTVDTLDTNATEKTETVTVTAQLIGVKTTKLTDTTDPKGGTVEEATTTGGTA 641
|
330 340
....*....|....*....|....*..
gi 613254167 899 GTNTTEDDKDADGGEVDVTITDHDDFT 925
Cdd:COG4932 642 NTGKTGTDLTDDTTVTSTTNTATSVED 668
|
|
| Herpes_U47 |
pfam05467 |
Herpesvirus glycoprotein U47; |
78-284 |
1.48e-03 |
|
Herpesvirus glycoprotein U47;
Pssm-ID: 283192 [Multi-domain] Cd Length: 677 Bit Score: 42.57 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 78 TENNSTTENTSTNPIKKETNTDSQPETKEEST--TSSTQKQQNNVTATT----------ETKPQN---IEKENVKPSTDK 142
Cdd:pfam05467 335 TENPTENPKSPPKPTNFENTTIRIPETFESTTvaTNTTQKLESTTFATTigieeisdniYSSPKNsiyLKSKSQQSTTKF 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 143 TATEDTSVILE----EKKAPNNTNNDVTTKPSTSEI------QTKPTTPQESTNiensqpqPTpskvdnQVTDATNPKEP 212
Cdd:pfam05467 415 TDTEHTTPILKfttwQDAARTYMSHNTEVQNMTENFikislgETMGITPKEPTN-------PT------QLLNVKNQTEY 481
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 613254167 213 VNVSKEELKNNPEKLKELVRNDSNTDRSTKPVATAPTSVAPKR-----LNAKMRFAVAQPAAVASNNVNDLIKVTKQ 284
Cdd:pfam05467 482 ANETHSTEVQTVKTFKEDRFQRTTLKSSSEPPTVQTLSVTPKKklpsnVTAKTEVQVTNNALPSSNSSHSITKVTEE 558
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
731-788 |
2.52e-03 |
|
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 37.64 E-value: 2.52e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 613254167 731 IQDANEPGIKDVKVTLKDSTGKIIGTTTTDASGKYKFTDLDNGNYTVEFETPaGYTPT 788
Cdd:pfam13620 6 VTDPSGAPVPGATVTVTNTDTGTVRTTTTDADGRYRFPGLPPGTYTVTVSAP-GFKTA 62
|
|
| YfaS |
COG2373 |
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function ... |
849-884 |
2.57e-03 |
|
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only];
Pssm-ID: 441940 [Multi-domain] Cd Length: 1605 Bit Score: 41.99 E-value: 2.57e-03
10 20 30
....*....|....*....|....*....|....*.
gi 613254167 849 IKDVTVTLQNEKGEVIGTTKTDENGKYRFDNLDSGK 884
Cdd:COG2373 291 VAGAEVELYDRNGQVLATATTDADGLARFPAGDRGE 326
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
22-247 |
2.60e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 41.70 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 22 KFSIRKYTVGTASILvgTTLIFGLGNQEAKAAENTSTENAKQDEASASDNKEVVSETENNSTTENTSTNpiKKETNTDSQ 101
Cdd:PRK08581 3 KNKILIYLLSTTLVL--PTLTSPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTS--NQDNNDKKF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 102 PETKEESTTSSTQKQQ--NNVTATTETKPQNIEKENVKPSTDKTATE--DTSVILEEKKAPNNTNNDVTTKPSTSEIQTK 177
Cdd:PRK08581 79 STIDSSTSDSNNIIDFiyKNLPQTNINQLLTKNKYDDNYSLTTLIQNlfNLNSDISDYEQPRNSEKSTNDSNKNSDSSIK 158
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 613254167 178 PTTPQESTN---IENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDRSTKPVATA 247
Cdd:PRK08581 159 NDTDTQSSKqdkADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSKDNQSMSDSALDS 231
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
17-243 |
2.75e-03 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 41.54 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 17 SNRLNKFSIRKYTVGTASILVGTTLIFGLGNQEAKAAENTSTENAKQDEASASDNKEV-------VSETENNST----TE 85
Cdd:NF033838 6 SERKVHYSIRKFSIGVASVVVASLFLGGVVHAEEVRGGNNPTVTSSGNESQKEHAKEVeshlekiLSEIQKSLDkrkhTQ 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 86 NTSTNPIKKETNTD---SQPETKEESTTSSTQKQQNNVTATTEtkpqNIEKENVKPsTDKTATEDTSVILEEKKA----- 157
Cdd:NF033838 86 NVALNKKLSDIKTEylyELNVLKEKSEAELTSKTKKELDAAFE----QFKKDTLEP-GKKVAEATKKVEEAEKKAkdqke 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 158 ------PNNT---------NNDVTTKPSTSE-IQTKPTTPQESTNIENSQpqptpSKVDNQVTDAT---NPKEPVNVSKE 218
Cdd:NF033838 161 edrrnyPTNTyktleleiaESDVEVKKAELElVKEEAKEPRDEEKIKQAK-----AKVESKKAEATrleKIKTDREKAEE 235
|
250 260
....*....|....*....|....*.
gi 613254167 219 ELKNNPE-KLKELVRNDSNTDRSTKP 243
Cdd:NF033838 236 EAKRRADaKLKEAVEKNVATSEQDKP 261
|
|
| bMG3 |
pfam11974 |
Bacterial alpha-2-macroglobulin MG3 domain; This is the MG3 domain from bacterial ... |
847-878 |
2.79e-03 |
|
Bacterial alpha-2-macroglobulin MG3 domain; This is the MG3 domain from bacterial alpha2-macroglobulins.
Pssm-ID: 432232 [Multi-domain] Cd Length: 102 Bit Score: 38.35 E-value: 2.79e-03
10 20 30
....*....|....*....|....*....|..
gi 613254167 847 KGIKDVTVTLQNEKGEVIGTTKTDENGKYRFD 878
Cdd:pfam11974 26 KPVAGVEVRLLDCNGQVLATGTTDAQGHARFE 57
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
59-131 |
3.29e-03 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 41.22 E-value: 3.29e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 613254167 59 ENAKQDEASASDNKEVVSETENNSTTENTSTNPI-KKETNTDSQPETKEESTTSSTQKQQNNVTATTETKPQNI 131
Cdd:PRK06347 54 ETAPADEASKSAEANTTKEAPATATPENTTEPTVePKQTETKEQTKTPEEKQPAAKQVEKAPAEPATVSNPDNA 127
|
|
| MetallophosN |
pfam16371 |
N terminal of Calcineurin-like phosphoesterase; This is the N-terminal of Calcineurin-like ... |
624-685 |
3.73e-03 |
|
N terminal of Calcineurin-like phosphoesterase; This is the N-terminal of Calcineurin-like phosphoesterases. It is around 150 residues in length from various Bacteroides species. The function of this family is unknown.
Pssm-ID: 435307 Cd Length: 73 Bit Score: 37.15 E-value: 3.73e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 613254167 624 KEKPMANVLVTltypDGTTkSVRTDANGHYEFggLKDGETYTVKFETPAGYLPTKENGTTDG 685
Cdd:pfam16371 1 NGKGLAGVVVS----DGYN-FTKTDANGRYTL--PDDKKAKFVYISTPAGYEVPTDDGITPR 55
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
46-212 |
6.30e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 39.50 E-value: 6.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 46 GNQEAKAAENTSTENAKQDEASASdnkevvSETENNSTTENTSTNPIKKE----TNTDSQPETKEESTTSSTQKQQNNVT 121
Cdd:PHA03255 28 GSSTASAGNVTGTTAVTTPSPSAS------GPSTNQSTTLTTTSAPITTTailsTNTTTVTSTGTTVTPVPTTSNASTIN 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 122 ATTETKPQNIEKENVKPSTdktatedtsvileekkAPNNTNNDVTTKPSTSEIQTKPTTPQESTniensqpqPTPSKVDN 201
Cdd:PHA03255 102 VTTKVTAQNITATEAGTGT----------------STGVTSNVTTRSSSTTSATTRITNATTLA--------PTLSSKGT 157
|
170
....*....|.
gi 613254167 202 QVTDATNPKEP 212
Cdd:PHA03255 158 SNATKTTAELP 168
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
55-218 |
6.57e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.03 E-value: 6.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 55 NTSTENAKQDEASASDNKEVVSETENNSTTENTSTNPikkETNTDSQPETKEESTT----SSTQKQQNNVTATTETKPQN 130
Cdd:pfam05539 194 TPQSQPATQGHQTATANQRLSSTEPVGTQGTTTSSNP---EPQTEPPPSQRGPSGSpqhpPSTTSQDQSTTGDGQEHTQR 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 131 IE----KENVKPSTDKTATEDTSVILEEKKA---PNNTNNDVTTKPSTSE--IQTKPTTpQESTNIENSQPqPTPSKVDN 201
Cdd:pfam05539 271 RKtppaTSNRRSPHSTATPPPTTKRQETGRPtprPTATTQSGSSPPHSSPpgVQANPTT-QNLVDCKELDP-PKPNSICY 348
|
170
....*....|....*..
gi 613254167 202 QVtDATNPKEPVNVSKE 218
Cdd:pfam05539 349 GV-GIYNEALPRGCDIV 364
|
|
| PRK13335 |
PRK13335 |
superantigen-like protein SSL3; Reviewed; |
29-187 |
7.81e-03 |
|
superantigen-like protein SSL3; Reviewed;
Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 39.72 E-value: 7.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 29 TVGTASILVG--TTLIFGLGNQEAKAAENTSTENAKQDEASASDNKEVVSETENNSTTENTSTNPIKKETNTDSQPETKE 106
Cdd:PRK13335 5 TIAKTSLALGllTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAPNTNE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 107 ESTTSSTqkqqnnVTATTETKPQNIEKENVkPSTDKTATEDTSVILEEKK------APNNTNNDVTTKPSTSEIQTKPTT 180
Cdd:PRK13335 85 EKTSASK------IEKISQPKQEEQKSLNI-SATPAPKQEQSQTTTESTTpktkvtTPPSTNTPQPMQSTKSDTPQSPTI 157
|
....*..
gi 613254167 181 PQESTNI 187
Cdd:PRK13335 158 KQAQTDM 164
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
48-223 |
8.60e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 39.77 E-value: 8.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 48 QEAKAAENTSTENAKQDEASASDNKEVVSETENNSTTENTSTNPIKK---ETNTDSQPETKEESTTSSTQKQQNNVTATT 124
Cdd:PRK08581 82 DSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNlnsDISDYEQPRNSEKSTNDSNKNSDSSIKNDT 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613254167 125 ETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTtkpSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVT 204
Cdd:PRK08581 162 DTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSN---SQPASDDTANQKSSSKDNQSMSDSALDSILDQYSE 238
|
170
....*....|....*....
gi 613254167 205 DATNPKEPVNVSKEELKNN 223
Cdd:PRK08581 239 DAKKTQKDYASQSKKDKTE 257
|
|
| |
