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Conserved domains on  [gi|613253679|gb|EZY59736|]
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hypothetical protein V061_02750, partial [Staphylococcus aureus R0353]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1024 super family cl05653
Protein of unknown function (DUF1024); This family consists of several hypothetical ...
 1-31 9.59e-10

Protein of unknown function (DUF1024); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus phage phi proteins. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam06260:

Pssm-ID: 283838  Cd Length: 82  Bit Score: 47.84  E-value: 9.59e-10
                         10        20        30
                 ....*....|....*....|....*....|.
gi 613253679   1 MNNREQIEQSVISASAYNGNDTEGLLKEIED 31
Cdd:pfam06260  1 MNNREQIEQSVISASAYNGNDTEGLLKEIED 31
 
Name Accession Description Interval E-value
DUF1024 pfam06260
Protein of unknown function (DUF1024); This family consists of several hypothetical ...
 1-31 9.59e-10

Protein of unknown function (DUF1024); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus phage phi proteins. The function of this family is unknown.


Pssm-ID: 283838  Cd Length: 82  Bit Score: 47.84  E-value: 9.59e-10
                         10        20        30
                 ....*....|....*....|....*....|.
gi 613253679   1 MNNREQIEQSVISASAYNGNDTEGLLKEIED 31
Cdd:pfam06260  1 MNNREQIEQSVISASAYNGNDTEGLLKEIED 31
 
Name Accession Description Interval E-value
DUF1024 pfam06260
Protein of unknown function (DUF1024); This family consists of several hypothetical ...
 1-31 9.59e-10

Protein of unknown function (DUF1024); This family consists of several hypothetical Staphylococcus aureus and Staphylococcus aureus phage phi proteins. The function of this family is unknown.


Pssm-ID: 283838  Cd Length: 82  Bit Score: 47.84  E-value: 9.59e-10
                         10        20        30
                 ....*....|....*....|....*....|.
gi 613253679   1 MNNREQIEQSVISASAYNGNDTEGLLKEIED 31
Cdd:pfam06260  1 MNNREQIEQSVISASAYNGNDTEGLLKEIED 31
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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