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Conserved domains on  [gi|613163074|gb|EZX70500|]
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hypothetical protein V040_00015 [Staphylococcus aureus C5453]

Protein Classification

glutathione peroxidase( domain architecture ID 10785352)

glutathione peroxidase catalyzes the reduction of hydroperoxides using GSH as a specific electron donor

CATH:  3.40.30.10
EC:  1.11.1.-
Gene Ontology:  GO:0043295|GO:0004602
PubMed:  11215509
SCOP:  4000042

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
1-158 1.11e-101

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


:

Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 288.51  E-value: 1.11e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   1 METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQ 80
Cdd:COG0386    1 MMSIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  81 NCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFF-NKKIKWNFTKFLVDREGNVVKRFAPQKKP--VQIEREIEKL 157
Cdd:COG0386   81 FCSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPGLLgGGDIKWNFTKFLIDRDGNVVARFAPTTKPedPELEAAIEKL 160

                 .
gi 613163074 158 L 158
Cdd:COG0386  161 L 161
 
Name Accession Description Interval E-value
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
1-158 1.11e-101

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 288.51  E-value: 1.11e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   1 METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQ 80
Cdd:COG0386    1 MMSIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  81 NCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFF-NKKIKWNFTKFLVDREGNVVKRFAPQKKP--VQIEREIEKL 157
Cdd:COG0386   81 FCSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPGLLgGGDIKWNFTKFLIDRDGNVVARFAPTTKPedPELEAAIEKL 160

                 .
gi 613163074 158 L 158
Cdd:COG0386  161 L 161
GSH_Peroxidase cd00340
Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a ...
3-154 2.02e-92

Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.


Pssm-ID: 238207 [Multi-domain]  Cd Length: 152  Bit Score: 264.76  E-value: 2.02e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   3 TIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNC 82
Cdd:cd00340    1 SIYDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEFC 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 613163074  83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNKKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREI 154
Cdd:cd00340   81 ETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPGLLGKDIKWNFTKFLVDRDGEVVKRFAPTTDPEELEKDI 152
btuE PRK10606
putative glutathione peroxidase; Provisional
3-147 1.87e-60

putative glutathione peroxidase; Provisional


Pssm-ID: 182585 [Multi-domain]  Cd Length: 183  Bit Score: 184.98  E-value: 1.87e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   3 TIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNC 82
Cdd:PRK10606   4 SILTTVVTTIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADQGFVVLGFPCNQFLGQEPGSDEEIKTYC 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTAA--------QHGFFNK------------KIKWNFTKFLVDREGNVVKRFA 142
Cdd:PRK10606  84 RTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAaptavapeESGFYARmvskgraplypdDILWNFEKFLVGRDGQVIQRFS 163

                 ....*
gi 613163074 143 PQKKP 147
Cdd:PRK10606 164 PDMTP 168
GSHPx pfam00255
Glutathione peroxidase;
4-110 2.31e-44

Glutathione peroxidase;


Pssm-ID: 395197  Cd Length: 108  Bit Score: 141.72  E-value: 2.31e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074    4 IYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCK 83
Cdd:pfam00255   1 IYEFSAKDIDGEPVPFDQYRGKVVLIVNVASKCGLTPQYTQLEELQERYKDRGLVILGFPCNQFGKQEPGSNEEIKYFCP 80
                          90       100
                  ....*....|....*....|....*..
gi 613163074   84 LNYGVTFPMHQKIDVKGEHQLPLFRYL 110
Cdd:pfam00255  81 GGYGVTFPLFSKIEVNGEKAHPVYKFL 107
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
5-158 5.45e-43

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 139.59  E-value: 5.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074    5 YDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQ-FEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCK 83
Cdd:TIGR02540   3 YSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQnYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFAR 82
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 613163074   84 LNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQhgffNKKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
Cdd:TIGR02540  83 RNYGVTFPMFSKIKILGSEAEPAFRFLVDSS----KKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
 
Name Accession Description Interval E-value
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
1-158 1.11e-101

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 288.51  E-value: 1.11e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   1 METIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQ 80
Cdd:COG0386    1 MMSIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  81 NCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFF-NKKIKWNFTKFLVDREGNVVKRFAPQKKP--VQIEREIEKL 157
Cdd:COG0386   81 FCSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPGLLgGGDIKWNFTKFLIDRDGNVVARFAPTTKPedPELEAAIEKL 160

                 .
gi 613163074 158 L 158
Cdd:COG0386  161 L 161
GSH_Peroxidase cd00340
Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a ...
3-154 2.02e-92

Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.


Pssm-ID: 238207 [Multi-domain]  Cd Length: 152  Bit Score: 264.76  E-value: 2.02e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   3 TIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNC 82
Cdd:cd00340    1 SIYDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEFC 80
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 613163074  83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNKKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREI 154
Cdd:cd00340   81 ETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPGLLGKDIKWNFTKFLVDRDGEVVKRFAPTTDPEELEKDI 152
btuE PRK10606
putative glutathione peroxidase; Provisional
3-147 1.87e-60

putative glutathione peroxidase; Provisional


Pssm-ID: 182585 [Multi-domain]  Cd Length: 183  Bit Score: 184.98  E-value: 1.87e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   3 TIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNC 82
Cdd:PRK10606   4 SILTTVVTTIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADQGFVVLGFPCNQFLGQEPGSDEEIKTYC 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  83 KLNYGVTFPMHQKIDVKGEHQLPLFRYLTAA--------QHGFFNK------------KIKWNFTKFLVDREGNVVKRFA 142
Cdd:PRK10606  84 RTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAaptavapeESGFYARmvskgraplypdDILWNFEKFLVGRDGQVIQRFS 163

                 ....*
gi 613163074 143 PQKKP 147
Cdd:PRK10606 164 PDMTP 168
PLN02412 PLN02412
probable glutathione peroxidase
2-158 8.04e-59

probable glutathione peroxidase


Pssm-ID: 166053 [Multi-domain]  Cd Length: 167  Bit Score: 180.18  E-value: 8.04e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQ 80
Cdd:PLN02412   7 KSIYDFTVKDIGGNDVSLNQYKGKVLLIVNVASKCGLTdSNYKELNVLYEKYKEQGFEILAFPCNQFLGQEPGSNEEIQQ 86
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 613163074  81 NCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNKKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
Cdd:PLN02412  87 TVCTRFKAEFPIFDKVDVNGKNTAPLYKYLKAEKGGLFGDAIKWNFTKFLVSKEGKVVQRYAPTTSPLKIEKDIQNLL 164
PLN02399 PLN02399
phospholipid hydroperoxide glutathione peroxidase
2-158 2.25e-55

phospholipid hydroperoxide glutathione peroxidase


Pssm-ID: 178021 [Multi-domain]  Cd Length: 236  Bit Score: 173.93  E-value: 2.25e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQ 80
Cdd:PLN02399  77 KSVHDFTVKDIDGKDVALSKFKGKVLLIVNVASKCGLTsSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQ 156
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 613163074  81 NCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNKKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
Cdd:PLN02399 157 FACTRFKAEFPIFDKVDVNGPSTAPVYQFLKSNAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLL 234
PTZ00256 PTZ00256
glutathione peroxidase; Provisional
3-158 1.15e-46

glutathione peroxidase; Provisional


Pssm-ID: 173495 [Multi-domain]  Cd Length: 183  Bit Score: 149.91  E-value: 1.15e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   3 TIYDFVVETNKGVTYKLDAYKG-DVMLIVNTASECGFTSQ-FEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQ 80
Cdd:PTZ00256  19 SFFEFEAIDIDGQLVQLSKFKGkKAIIVVNVACKCGLTSDhYTQLVELYKQYKSQGLEILAFPCNQFMEQEPWDEPEIKE 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  81 NCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFN-----KKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIE 155
Cdd:PTZ00256  99 YVQKKFNVDFPLFQKIEVNGENTHEIYKYLRRNSELFQNntneaRQIPWNFAKFLIDGQGKVVKYFSPKVNPNEMIQDIE 178

                 ...
gi 613163074 156 KLL 158
Cdd:PTZ00256 179 KLL 181
GSHPx pfam00255
Glutathione peroxidase;
4-110 2.31e-44

Glutathione peroxidase;


Pssm-ID: 395197  Cd Length: 108  Bit Score: 141.72  E-value: 2.31e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074    4 IYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCK 83
Cdd:pfam00255   1 IYEFSAKDIDGEPVPFDQYRGKVVLIVNVASKCGLTPQYTQLEELQERYKDRGLVILGFPCNQFGKQEPGSNEEIKYFCP 80
                          90       100
                  ....*....|....*....|....*..
gi 613163074   84 LNYGVTFPMHQKIDVKGEHQLPLFRYL 110
Cdd:pfam00255  81 GGYGVTFPLFSKIEVNGEKAHPVYKFL 107
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
5-158 5.45e-43

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 139.59  E-value: 5.45e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074    5 YDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQ-FEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCK 83
Cdd:TIGR02540   3 YSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQnYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFAR 82
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 613163074   84 LNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQhgffNKKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158
Cdd:TIGR02540  83 RNYGVTFPMFSKIKILGSEAEPAFRFLVDSS----KKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
PTZ00056 PTZ00056
glutathione peroxidase; Provisional
3-158 4.15e-35

glutathione peroxidase; Provisional


Pssm-ID: 240248 [Multi-domain]  Cd Length: 199  Bit Score: 121.11  E-value: 4.15e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   3 TIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGFT-SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEpgsGEEAAQN 81
Cdd:PTZ00056  18 SIYDYTVKTLEGTTVPMSSLKNKVLMITNSASKCGLTkKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQE---FPNTKDI 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  82 CKLN--YGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNKK-----IKWNFTKFLVDREGNVVKRFAPQKKPVQIEREI 154
Cdd:PTZ00056  95 RKFNdkNKIKYNFFEPIEVNGENTHELFKFLKANCDSMHDENgtlkaIGWNFGKFLVNKSGNVVAYFSPRTEPLELEKKI 174

                 ....
gi 613163074 155 EKLL 158
Cdd:PTZ00056 175 AELL 178
Bcp COG1225
Peroxiredoxin [Posttranslational modification, protein turnover, chaperones];
6-158 3.42e-10

Peroxiredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440838 [Multi-domain]  Cd Length: 136  Bit Score: 54.87  E-value: 3.42e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   6 DFVVETNKGVTYKLDAYKGDVMLIVNTASECGF-TSQFEGLQSLYEKYKDQGFVILGFpcnqfggqepgSGEEAAQnckl 84
Cdd:COG1225    3 DFTLPDLDGKTVSLSDLRGKPVVLYFYATWCPGcTAELPELRDLYEEFKDKGVEVLGV-----------SSDSDEA---- 67
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 613163074  85 nygvtfpmHQKidVKGEHQLPlFRYLTAAQHGFFNK-KIKWNFTKFLVDREGNVVKRFAPQKKPV-QIEREIEKLL 158
Cdd:COG1225   68 --------HKK--FAEKYGLP-FPLLSDPDGEVAKAyGVRGTPTTFLIDPDGKIRYVWVGPVDPRpHLEEVLEALL 132
TrxA COG0526
Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, ...
2-158 3.06e-08

Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440292 [Multi-domain]  Cd Length: 139  Bit Score: 49.69  E-value: 3.06e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   2 ETIYDFVVETNKGVTYKLDAYKGDVMLIVNTASECGF-TSQFEGLQSLYEKYKdqGFVILGFPCNQfggqepgsGEEAAQ 80
Cdd:COG0526    6 KPAPDFTLTDLDGKPLSLADLKGKPVLVNFWATWCPPcRAEMPVLKELAEEYG--GVVFVGVDVDE--------NPEAVK 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  81 NCKLNYGVTFPMH--------QKIDVKGehqLPlfryltaaqhgffnkkikwnfTKFLVDREGNVVKRFAPQKKPVQIER 152
Cdd:COG0526   76 AFLKELGLPYPVLldpdgelaKAYGVRG---IP---------------------TTVLIDKDGKIVARHVGPLSPEELEE 131

                 ....*.
gi 613163074 153 EIEKLL 158
Cdd:COG0526  132 ALEKLL 137
TlpA_like_family cd02966
TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are ...
6-142 6.87e-05

TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.


Pssm-ID: 239264 [Multi-domain]  Cd Length: 116  Bit Score: 39.91  E-value: 6.87e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   6 DFVVETNKGVTYKLDAYKGDVMLIVNTASECGfTSQFE--GLQSLYEKYKDQGFVILGFpcNQfggqePGSGEEAAQNCK 83
Cdd:cd02966    1 DFSLPDLDGKPVSLSDLKGKVVLVNFWASWCP-PCRAEmpELEALAKEYKDDGVEVVGV--NV-----DDDDPAAVKAFL 72
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 613163074  84 LNYGVTFPMHqkIDVKGEhqlplfrylTAAQHGffnkKIKWNFTkFLVDREGNVVKRFA 142
Cdd:cd02966   73 KKYGITFPVL--LDPDGE---------LAKAYG----VRGLPTT-FLIDRDGRIRARHV 115
AhpC-TSA pfam00578
AhpC/TSA family; This family contains proteins related to alkyl hydroperoxide reductase (AhpC) ...
6-140 1.44e-04

AhpC/TSA family; This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).


Pssm-ID: 425763 [Multi-domain]  Cd Length: 124  Bit Score: 39.51  E-value: 1.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074    6 DFVVETNKGVTYKLDAYKGD-VMLIVNTASEC-GFTSQFEGLQSLYEKYKDQGFVILGFPCNqfggqepgsGEEAAQNCK 83
Cdd:pfam00578   7 DFELPDGDGGTVSLSDYRGKwVVLFFYPADWTpVCTTELPALADLYEEFKKLGVEVLGVSVD---------SPESHKAFA 77
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   84 LNYGVTFPMhqKIDVKGEhqlplfrylTAAQHGFFNKkiKWNFTK---FLVDREGNVVKR 140
Cdd:pfam00578  78 EKYGLPFPL--LSDPDGE---------VARAYGVLNE--EEGGALratFVIDPDGKVRYI 124
PRK03147 PRK03147
thiol-disulfide oxidoreductase ResA;
6-139 2.69e-03

thiol-disulfide oxidoreductase ResA;


Pssm-ID: 179545 [Multi-domain]  Cd Length: 173  Bit Score: 36.52  E-value: 2.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074   6 DFVVETNKGVTYKLDAYKGDVMLIVNTASECGFTSQ-FEGLQSLYEKYKDQGFVILGFPCNqfggqEPgsgEEAAQNCKL 84
Cdd:PRK03147  43 NFVLTDLEGKKIELKDLKGKGVFLNFWGTWCKPCEKeMPYMNELYPKYKEKGVEIIAVNVD-----ET---ELAVKNFVN 114
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 613163074  85 NYGVTFPM-----HQKIDVKGEHQLPlfryltaaqhgffnkkikwnfTKFLVDREGNVVK 139
Cdd:PRK03147 115 RYGLTFPVaidkgRQVIDAYGVGPLP---------------------TTFLIDKDGKVVK 153
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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