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Conserved domains on  [gi|612908248|gb|EZV19889|]
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hypothetical protein U926_01010 [Staphylococcus aureus 12S00881]

Protein Classification

carboxylesterase/lipase family protein( domain architecture ID 1904627)

carboxylesterase/lipase family protein hydrolyzes ester bonds in a range of substrates, including triglycerides and other lipids, converting them into alcohols, acids, and fatty acids, and shares a common alpha/beta fold structural motif integral to its catalytic function in processes like fat metabolism and detoxification

CATH:  3.40.50.1820
EC:  3.1.1.-
SCOP:  3000102

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PnbA super family cl43668
Carboxylesterase type B [Lipid transport and metabolism];
5-279 5.59e-32

Carboxylesterase type B [Lipid transport and metabolism];


The actual alignment was detected with superfamily member COG2272:

Pssm-ID: 441873  Cd Length: 500  Bit Score: 123.07  E-value: 5.59e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   5 IESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD-TLESARNKAQHFQKLMRdyLDTDDVT---S 80
Cdd:COG2272  183 IAAFGGDPDNVTIFGESAGAASVAALLASPLAKGLFHRAIAQSGAGLSVlTLAEAEAVGAAFAAALG--VAPATLAalrA 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  81 LSTDDILMLMEKLKQSRGPSkgldLIYAPIKTGYIQNNYPTT---------KPIFACYTKDEGDIYI--TSEQKKLSPQR 149
Cdd:COG2272  261 LPAEELLAAQAALAAEGPGG----LPFGPVVDGDVLPEDPLEafaagraadVPLLIGTNRDEGRLFAalLGDLGPLTAAD 336
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 150 FIDIME------LNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQLniQDSNAQLWLAEFAWHDTSSAHYRS-AYHI 222
Cdd:COG2272  337 YRAALRrrfgddADEVLAAYPAASPAEALAALATDRVFRCPARRLAEAH--AAAGAPVYLYRFDWRSPPLRGFGLgAFHG 414
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612908248 223 LDMVFWFGNLQiLAAHQYPTTTHLKfLSRQMQNDLANFAKSGK------MPWPMYHNERRYYR 279
Cdd:COG2272  415 AELPFVFGNLD-APALTGLTPADRA-LSDQMQAYWVNFARTGDpngpglPEWPAYDPEDRAVM 475
 
Name Accession Description Interval E-value
PnbA COG2272
Carboxylesterase type B [Lipid transport and metabolism];
5-279 5.59e-32

Carboxylesterase type B [Lipid transport and metabolism];


Pssm-ID: 441873  Cd Length: 500  Bit Score: 123.07  E-value: 5.59e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   5 IESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD-TLESARNKAQHFQKLMRdyLDTDDVT---S 80
Cdd:COG2272  183 IAAFGGDPDNVTIFGESAGAASVAALLASPLAKGLFHRAIAQSGAGLSVlTLAEAEAVGAAFAAALG--VAPATLAalrA 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  81 LSTDDILMLMEKLKQSRGPSkgldLIYAPIKTGYIQNNYPTT---------KPIFACYTKDEGDIYI--TSEQKKLSPQR 149
Cdd:COG2272  261 LPAEELLAAQAALAAEGPGG----LPFGPVVDGDVLPEDPLEafaagraadVPLLIGTNRDEGRLFAalLGDLGPLTAAD 336
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 150 FIDIME------LNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQLniQDSNAQLWLAEFAWHDTSSAHYRS-AYHI 222
Cdd:COG2272  337 YRAALRrrfgddADEVLAAYPAASPAEALAALATDRVFRCPARRLAEAH--AAAGAPVYLYRFDWRSPPLRGFGLgAFHG 414
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612908248 223 LDMVFWFGNLQiLAAHQYPTTTHLKfLSRQMQNDLANFAKSGK------MPWPMYHNERRYYR 279
Cdd:COG2272  415 AELPFVFGNLD-APALTGLTPADRA-LSDQMQAYWVNFARTGDpngpglPEWPAYDPEDRAVM 475
COesterase pfam00135
Carboxylesterase family;
2-278 3.36e-20

Carboxylesterase family;


Pssm-ID: 395084 [Multi-domain]  Cd Length: 513  Bit Score: 90.06  E-value: 3.36e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248    2 HQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSG-AL-RLDTLESARNKAQHFQKLMR-DYLDTDDV 78
Cdd:pfam00135 172 QENIASFGGDPNRVTLFGESAGAASVSLLLLSPLSKGLFHRAILMSGsALsPWAIQSNARQRAKELAKLVGcPTSDSAEL 251
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   79 T----SLSTDDILMLMEKLKQSRGPskgLDLIYAPIKTGYIQNNYP---------TTKPIFACYTKDEG--DIYITSEQK 143
Cdd:pfam00135 252 VeclrSKPAEELLDAQLKLLVYGSV---PFVPFGPVVDGDFLPEHPeellksgnfPKVPLLIGVTKDEGllFAAYILDNV 328
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  144 KLSPQRFIDIMELNDIPLKY------------------------EDVQTAKQQSL-AITHCYFKQPMKQFLQQLniQDSN 198
Cdd:pfam00135 329 DILKALEEKLLRSLLIDLLYlllvdlpeeisaalreeyldwgdrDDPETSRRALVeLLTDYLFNCPVIRFADLH--ASRG 406
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  199 AQLWLAEFAwHDTSSAHY---RSAYHILDMVFWFGNLQILAahqYPTTTHLKFLSRQMQNDLANFAKSGK-------MPW 268
Cdd:pfam00135 407 TPVYMYSFD-YRGSSLRYpkwVGVDHGDELPYVFGTPFVGA---LLFTEEDEKLSRKMMTYWTNFAKTGNpngpeglPKW 482
                         330
                  ....*....|
gi 612908248  269 PMYHNERRYY 278
Cdd:pfam00135 483 PPYTDENGQY 492
Esterase_lipase cd00312
Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on ...
2-278 2.33e-16

Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.


Pssm-ID: 238191 [Multi-domain]  Cd Length: 493  Bit Score: 78.53  E-value: 2.33e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   2 HQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD--TLESARNKAQHFQKLM--RDYLDTDD 77
Cdd:cd00312  165 QDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALSPwaIQENARGRAKRLARLLgcNDTSSAEL 244
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  78 VTSL---STDDIL-----MLMEKLKQSRGPSKGLD---LIYAPIKTgYIQNNYPTTkPIFACYTKDEGDIYITSEQKKLS 146
Cdd:cd00312  245 LDCLrskSAEELLdatrkLLLFSYSPFLPFGPVVDgdfIPDDPEEL-IKEGKFAKV-PLIIGVTKDEGGYFAAMLLNFDA 322
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 147 P------QRFIDIMEL----------NDIPLKYEDVQTAKQQSLA-----ITHCYFKQPMKQFLQQlNIQDSNAQLWLAE 205
Cdd:cd00312  323 KliietnDRWLELLPYllfyaddalaDKVLEKYPGDVDDSVESRKnlsdmLTDLLFKCPARYFLAQ-HRKAGGSPVYAYV 401
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 206 FAWHDTSSAH----YRSAYHILDMVFWFGNLqILAAHQYPTTthlKFLSRQMQNDLANFAKSGKmP--------WPMYHN 273
Cdd:cd00312  402 FDHRSSLSVGrwppWLGTVHGDEIFFVFGNP-LLKEGLREEE---EKLSRTMMKYWANFAKTGN-PntegnlvvWPAYTS 476

                 ....*
gi 612908248 274 ERRYY 278
Cdd:cd00312  477 ESEKY 481
 
Name Accession Description Interval E-value
PnbA COG2272
Carboxylesterase type B [Lipid transport and metabolism];
5-279 5.59e-32

Carboxylesterase type B [Lipid transport and metabolism];


Pssm-ID: 441873  Cd Length: 500  Bit Score: 123.07  E-value: 5.59e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   5 IESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD-TLESARNKAQHFQKLMRdyLDTDDVT---S 80
Cdd:COG2272  183 IAAFGGDPDNVTIFGESAGAASVAALLASPLAKGLFHRAIAQSGAGLSVlTLAEAEAVGAAFAAALG--VAPATLAalrA 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  81 LSTDDILMLMEKLKQSRGPSkgldLIYAPIKTGYIQNNYPTT---------KPIFACYTKDEGDIYI--TSEQKKLSPQR 149
Cdd:COG2272  261 LPAEELLAAQAALAAEGPGG----LPFGPVVDGDVLPEDPLEafaagraadVPLLIGTNRDEGRLFAalLGDLGPLTAAD 336
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 150 FIDIME------LNDIPLKYEDVQTAKQQSLAITHCYFKQPMKQFLQQLniQDSNAQLWLAEFAWHDTSSAHYRS-AYHI 222
Cdd:COG2272  337 YRAALRrrfgddADEVLAAYPAASPAEALAALATDRVFRCPARRLAEAH--AAAGAPVYLYRFDWRSPPLRGFGLgAFHG 414
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 612908248 223 LDMVFWFGNLQiLAAHQYPTTTHLKfLSRQMQNDLANFAKSGK------MPWPMYHNERRYYR 279
Cdd:COG2272  415 AELPFVFGNLD-APALTGLTPADRA-LSDQMQAYWVNFARTGDpngpglPEWPAYDPEDRAVM 475
COesterase pfam00135
Carboxylesterase family;
2-278 3.36e-20

Carboxylesterase family;


Pssm-ID: 395084 [Multi-domain]  Cd Length: 513  Bit Score: 90.06  E-value: 3.36e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248    2 HQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSG-AL-RLDTLESARNKAQHFQKLMR-DYLDTDDV 78
Cdd:pfam00135 172 QENIASFGGDPNRVTLFGESAGAASVSLLLLSPLSKGLFHRAILMSGsALsPWAIQSNARQRAKELAKLVGcPTSDSAEL 251
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   79 T----SLSTDDILMLMEKLKQSRGPskgLDLIYAPIKTGYIQNNYP---------TTKPIFACYTKDEG--DIYITSEQK 143
Cdd:pfam00135 252 VeclrSKPAEELLDAQLKLLVYGSV---PFVPFGPVVDGDFLPEHPeellksgnfPKVPLLIGVTKDEGllFAAYILDNV 328
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  144 KLSPQRFIDIMELNDIPLKY------------------------EDVQTAKQQSL-AITHCYFKQPMKQFLQQLniQDSN 198
Cdd:pfam00135 329 DILKALEEKLLRSLLIDLLYlllvdlpeeisaalreeyldwgdrDDPETSRRALVeLLTDYLFNCPVIRFADLH--ASRG 406
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  199 AQLWLAEFAwHDTSSAHY---RSAYHILDMVFWFGNLQILAahqYPTTTHLKFLSRQMQNDLANFAKSGK-------MPW 268
Cdd:pfam00135 407 TPVYMYSFD-YRGSSLRYpkwVGVDHGDELPYVFGTPFVGA---LLFTEEDEKLSRKMMTYWTNFAKTGNpngpeglPKW 482
                         330
                  ....*....|
gi 612908248  269 PMYHNERRYY 278
Cdd:pfam00135 483 PPYTDENGQY 492
Esterase_lipase cd00312
Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on ...
2-278 2.33e-16

Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.


Pssm-ID: 238191 [Multi-domain]  Cd Length: 493  Bit Score: 78.53  E-value: 2.33e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248   2 HQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLD--TLESARNKAQHFQKLM--RDYLDTDD 77
Cdd:cd00312  165 QDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALSPwaIQENARGRAKRLARLLgcNDTSSAEL 244
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248  78 VTSL---STDDIL-----MLMEKLKQSRGPSKGLD---LIYAPIKTgYIQNNYPTTkPIFACYTKDEGDIYITSEQKKLS 146
Cdd:cd00312  245 LDCLrskSAEELLdatrkLLLFSYSPFLPFGPVVDgdfIPDDPEEL-IKEGKFAKV-PLIIGVTKDEGGYFAAMLLNFDA 322
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 147 P------QRFIDIMEL----------NDIPLKYEDVQTAKQQSLA-----ITHCYFKQPMKQFLQQlNIQDSNAQLWLAE 205
Cdd:cd00312  323 KliietnDRWLELLPYllfyaddalaDKVLEKYPGDVDDSVESRKnlsdmLTDLLFKCPARYFLAQ-HRKAGGSPVYAYV 401
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 612908248 206 FAWHDTSSAH----YRSAYHILDMVFWFGNLqILAAHQYPTTthlKFLSRQMQNDLANFAKSGKmP--------WPMYHN 273
Cdd:cd00312  402 FDHRSSLSVGrwppWLGTVHGDEIFFVFGNP-LLKEGLREEE---EKLSRTMMKYWANFAKTGN-PntegnlvvWPAYTS 476

                 ....*
gi 612908248 274 ERRYY 278
Cdd:cd00312  477 ESEKY 481
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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